Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Forward (+)

11402395 .. 11404388

Gene Structure 1994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G011670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGTATTTCAAGCTTGTAATAATTCTCGTAGTACTTGTCGTAGAAGCAGCTGAAGGTTTCGGCTTCACCTACAATGGTTTCAAGTCTTTCAAGTCTGATGGCTATGATGAAGAAATTTGGAGAAGAGTCATGGTTGATGGTTCAGTGAGATTAGATCAAGGGAGTATCTTCTACCCCGAGCCAGTAACCTTCAAGAAGGACTCATCATCCGGTTCAGAAGTTTTCTCCTTCTCTACCACTTTCGTCTTCGCTATCATATCAGAATACAAAACTCTCAGAGACCATGGACTCGCCTTTGTTATGTCTCCGGCCCAGTACGTCTTTTTCAGTGGCTCCAACAATCGGAATATGAGCAATCATGTTTTTGCTGTGGAGCTCGACACGATTCAGAGCAAAGATTTCATTGACATCGATGACAATCATGTTGGGATCGACATCAATGGATTCGACTCTTTGAAGTCAGCAACAGCAGGATACTACGTTAACAACGACCCAAGGCACCGAAGGAAATTGAACCTCACCAGTGGTAATCCAATGACAGTTTGGGTCGAGTATGAAGGTAGCCGGAAGCGAATTAATGTTTTCTTGGCTCCAATTGATGTCGTCGTTACATTCCATTATATTTTGGGCTGGAGCTTTCAGATGAATCGCCAAGCTCAAGAACTTGTTCCTTCACTGCTTCCCAAATTGCCTAGGATAGGAGACAAAGAAGTGTCTAAACTTCTGACCTTTGGTGTGCCTGTGATGGCTGTGAGTTTAGTTATGCTAGCGATTTCTCTTGTGGTATTTGTCATGAGAAGGAAGAAGTACGCAGAACTACTTGAAGATTGGGAGCTCGAGTATGGGCCTCAAAGGTTTAAATACGAAGAATTGTATAAAGCCACTAAAGGGTTTGGAAAGGAAGCGCTCTTGGGTGTTGGGGGATTTGGTGAGGTCTATAGAGGTATATTACCCAGCTCTAAGCTTGACATTGCTGTGAAGAGGGTTTCGCATAAATCAAGACAGGGAATGAAGGAATTTGTTGCAGAAATTGTTAGCCTTGGCCGGCTCCGTCACCGGAATTTAGTACAACTCTTGGGCTATTGCAGGCGAAATGGTGAACTACTTTTGGTGTATTACTACATGCCTAACGGTAGCTTGGACAAGTACCTCTACAACCAACCGAAGGTGACTCTCAACTGGAGTCAGAGATTTAAAGTCATCAAAGGTGTGGCTTCAGGGTTGTGTTATCTTCATGAGGAGTGGGAACAAGTAGTAATTCACAGAGATGTGAAGGCTAGCAATGTGCTACTAGACCAGGATTTGAATGGAAGACTGGGAGATTTTGGACTTGCAAGATTATGTGCCCATGGAACAGACCCTCAAACTACTCATGTAGCTGGTACACGTGGGTATTTAGCCCCGGAGCATGCAAGAACAGGTCGGGCCACCACGAGCACAGACGTGTTTGCGTTCGGGGCATTTTTGCTTGAAGTTGCATGTGGAAGAAGGCCAATAGAGACAAAAGGACCAGAGGAGGATATCGTTTTGGCTCATCGGGTTTTTTCGTGTTGGAATAGAGCCAACAGCCAGGCCAAGCATGCGACAAGTGATGCAATATTTGGAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

536

Amino Acids

60.5

Weight (kDa)

8.79

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	47 - 200	1.6e-38	Legume lectin domain
Pkinase	PF00069	300 - 506	7.1e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	303 - 504	2.3e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	498
AclWI	GGATC	1 cut(s)	437
AcoI	YGGCCR	1 cut(s)	1042
AcsI	RAATTY	3 cut(s)	114, 1016, 1060
AcuI	CTGAAG	2 cut(s)	72, 1200
AcvI	CACGTG	1 cut(s)	1388
AfaI	GTAC	6 cut(s)	33, 317, 809, 1068, 1148, 1384
AfeI	AGCGCT	1 cut(s)	906
AfiI	CCNNNNNNNGG	4 cut(s)	342, 698, 888, 1165
AflIII	ACRYGT	2 cut(s)	1385, 1443
AgsI	TTSAA	9 cut(s)	10, 82, 91, 193, 457, 514, 824, 1306, 1472
AjiI	CACGTC	1 cut(s)	1444
AjnI	CCWGG	2 cut(s)	1296, 1569
AleI	CACNNNNGTG	1 cut(s)	1442
Alw21I	GWGCWC	3 cut(s)	378, 837, 1439
Alw26I	GTCTC	4 cut(s)	273, 309, 696, 1493
AlwI	GGATC	1 cut(s)	437
Ama87I	CYCGRG	2 cut(s)	176, 836
Aor51HI	AGCGCT	1 cut(s)	906
AoxI	GGCC	6 cut(s)	309, 845, 1042, 1425, 1490, 1572
ApeKI	GCWGC	1 cut(s)	47
ApoI	RAATTY	3 cut(s)	114, 1016, 1060
AseI	ATTAAT	1 cut(s)	576
Asp700I	GAANNNNTTC	1 cut(s)	666
AspA2I	CCTAGG	1 cut(s)	692
AspLEI	GCGC	1 cut(s)	907
AspS9I	GGNCC	4 cut(s)	310, 845, 1425, 1508
AsuC2I	CCSGG	1 cut(s)	1403
AsuHPI	GGTGA	6 cut(s)	58, 511, 941, 1046, 1109, 1180
AsuNHI	GCTAGC	2 cut(s)	766, 1277
AvaI	CYCGRG	2 cut(s)	176, 836
AvaII	GGWCC	1 cut(s)	1508
AvrII	CCTAGG	1 cut(s)	692
BaeGI	GKGCMC	1 cut(s)	1348
BanI	GGYRCC	1 cut(s)	498
BanII	GRGCYC	2 cut(s)	378, 837
BauI	CACGAG	1 cut(s)	1432
BbrPI	CACGTG	1 cut(s)	1388
BbsI	GAAGAC	2 cut(s)	238, 1318
Bbv12I	GWGCWC	3 cut(s)	378, 837, 1439
BbvI	GCAGC	1 cut(s)	59
BccI	CCATC	3 cut(s)	92, 131, 739
BciT130I	CCWGG	2 cut(s)	1298, 1571
BciVI	GTATCC	1 cut(s)	467
BcnI	CCSGG	1 cut(s)	1403
BcoDI	GTCTC	4 cut(s)	273, 309, 696, 1493
BfaI	CTAG	4 cut(s)	693, 767, 1278, 1292
BfmI	CTRYAG	1 cut(s)	937
BfoI	RGCGCY	1 cut(s)	908
BfuI	GTATCC	1 cut(s)	467
BisI	GCNGC	1 cut(s)	48
BlnI	CCTAGG	1 cut(s)	692
BlsI	GCNGC	1 cut(s)	49
BmcAI	AGTACT	1 cut(s)	33
Bme1390I	CCNGG	3 cut(s)	1298, 1403, 1571
Bme18I	GGWCC	1 cut(s)	1508
BmeT110I	CYCGRG	2 cut(s)	176, 836
BmgBI	CACGTC	1 cut(s)	1444
BmgT120I	GGNCC	4 cut(s)	310, 845, 1425, 1508
BmiI	GGNNCC	4 cut(s)	334, 500, 591, 1049
BmrFI	CCNGG	3 cut(s)	1298, 1403, 1571
BmrI	ACTGGG	2 cut(s)	307, 1325
BmsI	GCATC	1 cut(s)	1582
BmtI	GCTAGC	2 cut(s)	770, 1281
BmuI	ACTGGG	2 cut(s)	307, 1325
BpiI	GAAGAC	2 cut(s)	238, 1318
BpmI	CTGGAG	2 cut(s)	652, 1201
BpuEI	CTTGAG	1 cut(s)	642
BpuMI	CCSGG	1 cut(s)	1403
Bsa29I	ATCGAT	1 cut(s)	411
BsaAI	YACGTR	1 cut(s)	1388
BsaBI	GATNNNNATC	2 cut(s)	417, 434
BsaI	GGTCTC	1 cut(s)	273
BsaJI	CCNNGG	6 cut(s)	283, 494, 692, 1039, 1348, 1401
BsaWI	WCCGGW	2 cut(s)	209, 1056
BsaXI	ACNNNNNCTCC	2 cut(s)	824, 854
Bsc4I	CCNNNNNNNGG	4 cut(s)	342, 698, 888, 1165
Bse118I	RCCGGY	1 cut(s)	1044
Bse1I	ACTGG	5 cut(s)	182, 313, 522, 1184, 1320
Bse3DI	GCAATG	2 cut(s)	969, 1288
Bse8I	GATNNNNATC	2 cut(s)	417, 434
BseBI	CCWGG	2 cut(s)	1298, 1571
BseCI	ATCGAT	1 cut(s)	411
BseDI	CCNNGG	6 cut(s)	283, 494, 692, 1039, 1348, 1401
BseGI	GGATG	1 cut(s)	206
BseJI	GATNNNNATC	2 cut(s)	417, 434
BseLI	CCNNNNNNNGG	4 cut(s)	342, 698, 888, 1165
BseMI	GCAATG	2 cut(s)	969, 1288
BseMII	CTCAG	1 cut(s)	289
BseNI	ACTGG	5 cut(s)	182, 313, 522, 1184, 1320
BseRI	GAGGAG	2 cut(s)	1253, 1529
BseSI	GKGCMC	1 cut(s)	1348
BseXI	GCAGC	1 cut(s)	59
BseYI	CCCAGC	1 cut(s)	953
BshFI	GGCC	6 cut(s)	311, 847, 1044, 1427, 1492, 1574
BshNI	GGYRCC	1 cut(s)	498
BshVI	ATCGAT	1 cut(s)	411
BsiHKAI	GWGCWC	3 cut(s)	378, 837, 1439
BsiHKCI	CYCGRG	2 cut(s)	176, 836
BsiSI	CCGG	6 cut(s)	210, 308, 565, 1045, 1057, 1403
BslI	CCNNNNNNNGG	4 cut(s)	342, 698, 888, 1165
BsmAI	GTCTC	4 cut(s)	273, 309, 696, 1493
BsnI	GGCC	6 cut(s)	311, 847, 1044, 1427, 1492, 1574
Bso31I	GGTCTC	1 cut(s)	273
BsoBI	CYCGRG	2 cut(s)	176, 836
Bsp1286I	GDGCHC	4 cut(s)	378, 837, 1348, 1439
Bsp143I	GATC	2 cut(s)	154, 429
Bsp19I	CCATGG	2 cut(s)	283, 1348
BspANI	GGCC	6 cut(s)	311, 847, 1044, 1427, 1492, 1574
BspCNI	CTCAG	1 cut(s)	288
BspDI	ATCGAT	1 cut(s)	411
BspHI	TCATGA	2 cut(s)	792, 1234
BspLI	GGNNCC	4 cut(s)	334, 500, 591, 1049
BspOI	GCTAGC	2 cut(s)	770, 1281
BspPI	GGATC	1 cut(s)	437
BspT107I	GGYRCC	1 cut(s)	498
BspTNI	GGTCTC	1 cut(s)	273
BsrDI	GCAATG	2 cut(s)	969, 1288
BsrFI	RCCGGY	1 cut(s)	1044
BsrI	ACTGG	5 cut(s)	182, 313, 522, 1184, 1320
BssAI	RCCGGY	1 cut(s)	1044
BssECI	CCNNGG	6 cut(s)	283, 494, 692, 1039, 1348, 1401
BssMI	GATC	2 cut(s)	154, 429
BssSI	CACGAG	1 cut(s)	1432
BssT1I	CCWWGG	5 cut(s)	283, 494, 692, 1039, 1348
Bst2BI	CACGAG	1 cut(s)	1432
Bst2UI	CCWGG	2 cut(s)	1298, 1571
Bst4CI	ACNGT	2 cut(s)	541, 1133
Bst6I	CTCTTC	2 cut(s)	118, 974
BstBAI	YACGTR	1 cut(s)	1388
BstC8I	GCNNGC	6 cut(s)	768, 1046, 1088, 1279, 1410, 1581
BstDEI	CTNAG	2 cut(s)	275, 960
BstDSI	CCRYGG	2 cut(s)	283, 1348
BstENI	CCTNNNNNAGG	1 cut(s)	696
BstF5I	GGATG	1 cut(s)	206
BstH2I	RGCGCY	1 cut(s)	908
BstHHI	GCGC	1 cut(s)	907
BstKTI	GATC	2 cut(s)	157, 432
BstMAI	GTCTC	4 cut(s)	273, 309, 696, 1493
BstMBI	GATC	2 cut(s)	154, 429
BstMWI	GCNNNNNNNGC	2 cut(s)	1457, 1580
BstNI	CCWGG	2 cut(s)	1298, 1571
BstNSI	RCATGY	4 cut(s)	1126, 1412, 1482, 1583
BstSCI	CCNGG	3 cut(s)	1296, 1401, 1569
BstSFI	CTRYAG	1 cut(s)	937
BstSLI	GKGCMC	1 cut(s)	1348
BstV1I	GCAGC	1 cut(s)	59
BstV2I	GAAGAC	2 cut(s)	238, 1318
Bsu15I	ATCGAT	1 cut(s)	411
BsuI	GTATCC	1 cut(s)	467
BsuRI	GGCC	6 cut(s)	311, 847, 1044, 1427, 1492, 1574
BsuTUI	ATCGAT	1 cut(s)	411
BtgI	CCRYGG	2 cut(s)	283, 1348
BtrI	CACGTC	1 cut(s)	1444
BtsCI	GGATG	1 cut(s)	206
BtsI	GCAGTG	1 cut(s)	674
BtsIMutI	CAGTG	4 cut(s)	150, 334, 529, 674
Cac8I	GCNNGC	6 cut(s)	768, 1046, 1088, 1279, 1410, 1581
CciI	TCATGA	2 cut(s)	792, 1234
CfoI	GCGC	1 cut(s)	907
Cfr10I	RCCGGY	1 cut(s)	1044
Cfr13I	GGNCC	4 cut(s)	310, 845, 1425, 1508
ClaI	ATCGAT	1 cut(s)	411
Csp6I	GTAC	6 cut(s)	32, 316, 808, 1067, 1147, 1383
CviQI	GTAC	6 cut(s)	32, 316, 808, 1067, 1147, 1383
DdeI	CTNAG	2 cut(s)	275, 960
DpnI	GATC	2 cut(s)	156, 431
DpnII	GATC	2 cut(s)	154, 429
DraI	TTTAAA	2 cut(s)	859, 1195
EaeI	YGGCCR	1 cut(s)	1042
Eam1104I	CTCTTC	2 cut(s)	118, 974
EarI	CTCTTC	2 cut(s)	118, 974
Ecl136II	GAGCTC	2 cut(s)	376, 835
Eco130I	CCWWGG	5 cut(s)	283, 494, 692, 1039, 1348
Eco24I	GRGCYC	2 cut(s)	378, 837
Eco31I	GGTCTC	1 cut(s)	273
Eco32I	GATATC	1 cut(s)	1522
Eco47I	GGWCC	1 cut(s)	1508
Eco47III	AGCGCT	1 cut(s)	906
Eco53kI	GAGCTC	2 cut(s)	376, 835
Eco57I	CTGAAG	2 cut(s)	72, 1200
Eco72I	CACGTG	1 cut(s)	1388
Eco88I	CYCGRG	2 cut(s)	176, 836
EcoICRI	GAGCTC	2 cut(s)	376, 835
EcoNI	CCTNNNNNAGG	1 cut(s)	696
EcoRII	CCWGG	2 cut(s)	1296, 1569
EcoRV	GATATC	1 cut(s)	1522
EcoT14I	CCWWGG	5 cut(s)	283, 494, 692, 1039, 1348
EcoT38I	GRGCYC	2 cut(s)	378, 837
ErhI	CCWWGG	5 cut(s)	283, 494, 692, 1039, 1348
Fnu4HI	GCNGC	1 cut(s)	48
FokI	GGATG	1 cut(s)	193
FriOI	GRGCYC	2 cut(s)	378, 837
Fsp4HI	GCNGC	1 cut(s)	48
FspBI	CTAG	4 cut(s)	693, 767, 1278, 1292
GlaI	GCGC	1 cut(s)	906
GluI	GCNGC	1 cut(s)	48
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	2 cut(s)	652, 1201
HaeII	RGCGCY	1 cut(s)	908
HaeIII	GGCC	6 cut(s)	311, 847, 1044, 1427, 1492, 1574
HapII	CCGG	6 cut(s)	210, 308, 565, 1045, 1057, 1403
HhaI	GCGC	1 cut(s)	907
Hin6I	GCGC	1 cut(s)	905
HinP1I	GCGC	1 cut(s)	905
HincII	GTYRAC	1 cut(s)	484
HindII	GTYRAC	1 cut(s)	484
HindIII	AAGCTT	2 cut(s)	11, 962
HinfI	GANTC	9 cut(s)	126, 200, 288, 385, 444, 449, 646, 1171, 1183
HpaI	GTTAAC	1 cut(s)	484
HpaII	CCGG	6 cut(s)	210, 308, 565, 1045, 1057, 1403
HphI	GGTGA	6 cut(s)	58, 511, 941, 1046, 1109, 1180
Hpy166II	GTNNAC	3 cut(s)	484, 1100, 1385
Hpy188I	TCNGA	9 cut(s)	97, 217, 262, 278, 345, 390, 642, 726, 1188
Hpy188III	TCNNGA	5 cut(s)	193, 659, 793, 999, 1235
Hpy8I	GTNNAC	3 cut(s)	484, 1100, 1385
Hpy99I	CGWCG	1 cut(s)	608
HpyCH4III	ACNGT	2 cut(s)	541, 1133
HpyCH4IV	ACGT	4 cut(s)	318, 480, 1387, 1443
HpyCH4V	TGCA	6 cut(s)	1025, 1086, 1334, 1412, 1478, 1595
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1457, 1580
HpyF3I	CTNAG	2 cut(s)	275, 960
HpySE526I	ACGT	4 cut(s)	318, 480, 1387, 1443
HspAI	GCGC	1 cut(s)	905
KroI	GCCGGC	1 cut(s)	1044
KroNI	GCCGGC	1 cut(s)	1046
KspAI	GTTAAC	1 cut(s)	484
Kzo9I	GATC	2 cut(s)	154, 429
LmnI	GCTCC	7 cut(s)	338, 373, 595, 633, 832, 1053, 1405
Lsp1109I	GCAGC	1 cut(s)	59
LweI	GCATC	1 cut(s)	1582
MaeI	CTAG	4 cut(s)	693, 767, 1278, 1292
MaeII	ACGT	4 cut(s)	318, 480, 1387, 1443
MaeIII	GTNAC	4 cut(s)	184, 607, 1052, 1168
MalI	GATC	2 cut(s)	156, 431
MboI	GATC	2 cut(s)	154, 429
MfeI	CAATTG	1 cut(s)	594
MhlI	GDGCHC	4 cut(s)	378, 837, 1348, 1439
MlyI	GAGTC	6 cut(s)	135, 194, 282, 443, 1165, 1192
MmeI	TCCRAC	2 cut(s)	360, 1532
MroNI	GCCGGC	1 cut(s)	1044
MroXI	GAANNNNTTC	1 cut(s)	666
MseI	TTAA	4 cut(s)	483, 576, 858, 1194
MslI	CAYNNNNRTG	3 cut(s)	974, 1266, 1442
MspA1I	CMGCKG	1 cut(s)	50
MspI	CCGG	6 cut(s)	210, 308, 565, 1045, 1057, 1403
MspR9I	CCNGG	3 cut(s)	1298, 1403, 1571
MunI	CAATTG	1 cut(s)	594
MvaI	CCWGG	2 cut(s)	1298, 1571
MwoI	GCNNNNNNNGC	2 cut(s)	1457, 1580
NaeI	GCCGGC	1 cut(s)	1046
NciI	CCSGG	1 cut(s)	1403
NcoI	CCATGG	2 cut(s)	283, 1348
NdeII	GATC	2 cut(s)	154, 429
NgoMIV	GCCGGC	1 cut(s)	1044
NheI	GCTAGC	2 cut(s)	766, 1277
NlaIV	GGNNCC	4 cut(s)	334, 500, 591, 1049
NmuCI	GTSAC	2 cut(s)	1052, 1168
NspI	RCATGY	4 cut(s)	1126, 1412, 1482, 1583
OliI	CACNNNNGTG	1 cut(s)	1442
PaeI	GCATGC	2 cut(s)	1412, 1583
PaeR7I	CTCGAG	1 cut(s)	836
PagI	TCATGA	2 cut(s)	792, 1234
PcsI	WCGNNNNNNNCGW	1 cut(s)	486
PdiI	GCCGGC	1 cut(s)	1046
PdmI	GAANNNNTTC	1 cut(s)	666
PfeI	GAWTC	3 cut(s)	385, 444, 646
PkrI	GCNGC	1 cut(s)	49
PleI	GAGTC	6 cut(s)	134, 194, 282, 443, 1165, 1191
PmaCI	CACGTG	1 cut(s)	1388
PmlI	CACGTG	1 cut(s)	1388
PpsI	GAGTC	6 cut(s)	134, 194, 282, 443, 1165, 1191
Ppu21I	YACGTR	1 cut(s)	1388
PshBI	ATTAAT	1 cut(s)	576
Psp124BI	GAGCTC	2 cut(s)	378, 837
Psp6I	CCWGG	2 cut(s)	1296, 1569
PspCI	CACGTG	1 cut(s)	1388
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	2 cut(s)	1296, 1569
PspN4I	GGNNCC	4 cut(s)	334, 500, 591, 1049
PspPI	GGNCC	4 cut(s)	310, 845, 1425, 1508
PspXI	VCTCGAGB	1 cut(s)	836
PvuII	CAGCTG	1 cut(s)	50
RsaI	GTAC	6 cut(s)	33, 317, 809, 1068, 1148, 1384
RsaNI	GTAC	6 cut(s)	32, 316, 808, 1067, 1147, 1383
RseI	CAYNNNNRTG	3 cut(s)	974, 1266, 1442
SacI	GAGCTC	2 cut(s)	378, 837
SaqAI	TTAA	4 cut(s)	483, 576, 858, 1194
SatI	GCNGC	1 cut(s)	48
Sau3AI	GATC	2 cut(s)	154, 429
Sau96I	GGNCC	4 cut(s)	310, 845, 1425, 1508
ScaI	AGTACT	1 cut(s)	33
SchI	GAGTC	6 cut(s)	135, 194, 282, 443, 1165, 1192
ScrFI	CCNGG	3 cut(s)	1298, 1403, 1571
SduI	GDGCHC	4 cut(s)	378, 837, 1348, 1439
SfaNI	GCATC	1 cut(s)	1582
SfcI	CTRYAG	1 cut(s)	937
Sfr274I	CTCGAG	1 cut(s)	836
SinI	GGWCC	1 cut(s)	1508
SlaI	CTCGAG	1 cut(s)	836
SmiMI	CAYNNNNRTG	3 cut(s)	974, 1266, 1442
SmlI	CTYRAG	2 cut(s)	657, 836
SmoI	CTYRAG	2 cut(s)	657, 836
SphI	GCATGC	2 cut(s)	1412, 1583
SspI	AATATT	1 cut(s)	1599
SspMI	CTAG	4 cut(s)	693, 767, 1278, 1292
SstI	GAGCTC	2 cut(s)	378, 837
StyD4I	CCNGG	3 cut(s)	1296, 1401, 1569
StyI	CCWWGG	5 cut(s)	283, 494, 692, 1039, 1348
TaaI	ACNGT	2 cut(s)	541, 1133
TaiI	ACGT	4 cut(s)	321, 483, 1390, 1446
TaqI	TCGA	6 cut(s)	378, 411, 432, 447, 549, 837
TatI	WGTACW	2 cut(s)	31, 1066
TfiI	GAWTC	3 cut(s)	385, 444, 646
Tru1I	TTAA	4 cut(s)	483, 576, 858, 1194
Tru9I	TTAA	4 cut(s)	483, 576, 858, 1194
TscAI	CASTG	4 cut(s)	150, 334, 529, 681
TseFI	GTSAC	2 cut(s)	1052, 1168
TseI	GCWGC	1 cut(s)	47
Tsp45I	GTSAC	2 cut(s)	1052, 1168
TspDTI	ATGAA	6 cut(s)	123, 391, 570, 659, 1025, 1223
TspGWI	ACGGA	1 cut(s)	1040
TspRI	CASTG	4 cut(s)	150, 334, 529, 681
VpaK11BI	GGWCC	1 cut(s)	1508
VspI	ATTAAT	1 cut(s)	576
XagI	CCTNNNNNAGG	1 cut(s)	696
XapI	RAATTY	3 cut(s)	114, 1016, 1060
XceI	RCATGY	4 cut(s)	1126, 1412, 1482, 1583
XcmI	CCANNNNNNNNNTGG	2 cut(s)	540, 1304
XhoI	CTCGAG	1 cut(s)	836
XmaJI	CCTAGG	1 cut(s)	692
XmnI	GAANNNNTTC	1 cut(s)	666
XspI	CTAG	4 cut(s)	693, 767, 1278, 1292
ZrmI	AGTACT	1 cut(s)	33

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.