Rh6AG060500

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
9066416 .. 9094801
28386 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG060500.1

Sequence Viewer

Length: 2001 bp
ATGTTTGGCAAACTTTCTGTTCTACTAGTACTACTTGTCAGTCTGGTACCAGCAGAAGCCCAAGACCTCAATTTCATCTACAATTCTGGTTTCAATGGCCGTTCTGGTCTTAATCTCAGTCTAGACGGCATGGCAGAGATCACACCAAAAGGTCTCTTGAAGGTTACAAACGACACCAAACAGAAAAGTGGCCATGCCTTCTACCCTAACCCAGTGACCTTCAAGAACTCGGAGAGCGACGCCGCCTTCTCCTTCTCCACCAACTTTATCTTTGCCATCCGATCAGAGTACCCTCCTATCAGCAGCCGTGGAATCGCCTTTGTCATCGCTCCGACGAGAGGCCTCCCCGGAGCTCTGGCGTTCCAGTACCTGGGCCTGTTCAACGTCTCCAACAATGGGAATTTCACCAATCATGTTTTTGCTGTGGAGCTTGACACGGTCCAGAACGCGGAATTGAGTGACATCAATGAAAACCATGTTGGGATAGACATCAATGGCTTGCGCTCTGTCGAAGCTGCTCCAGCTGGTTATTTTGATGGTCAGTACTTCAAGAACCTGACTCTTACCAGTGGTAAAGAAATGAGAGTTTGGGTTGAATATGATGGTACCAAGAAGCAAATTGAAGTTACTATGGCTCCAATTTCTGTTGCAACTAAACCCCCAACTCCACTTATGTCTTTGAAATATGACCTTTCCCCAATTCTCAACAAAACCATGTATATTGGCTTTTCCTCTTCAACTGCTGTAGCCCCCACATCCCACTATGTCGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGGGATCCATGCTTTTCACCCTGGATGTGCCTCTGATTTCAGTAAGTTTGGTTTTGCTAGTGGTTTCTGGGGTGGTTTATGTCATAAGAAGGAAGAGGAAGTTTGCAGAAGTGCTTGAAGATTGGGAGCTAGAGTATGGTCCTCAGAGGTTTAAGTACAAAGAATTGTATATAGCCACTAATGGGTTTAGGGAAAATGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTTTATAGAGGTTCATTACCCTCCTCTAAAATTGAGATCGCAGTGAAGAGGGTATCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATTTAGTACAACTGTTGGGATATTGCAGGCGAAAGGGTGAACTACTTTTGGTGTATGACTACATGCCTAATGGTAGTTTGGATAAGTTCCTCTACAACCAACCGAATGTGACTCTTAACTGGAGTCAAAGGTTTAGAGTCATCAAAGGTATGGCTTCAGGGTTGTTCTATCTTCATGAAGAATGGGAACAAGTAGTGATTCACAGAGATGTGAAGGCCAGTAATGTGCTACTAGACAAGGATTTCAATGGAAGACTAGGAGATTTTGGACTTGCAAGATTATGTGACCGTGGAACAGACCCTGAAACTACTCATGTAGCTGGCACACTTGGGTATATAGCCCCAGAGCATGCAAGAACCGGCCGTGCCACCACGAGCACAGATGTGTTTTCTTTCGGGGCATTTTTGCTCGAAGTTGCCTGTGGAAGAAGGCCAATAGATAGACAAGGACCAGAGGATGATATCTTTTTGGTTGATCGGGTTTTTTCGTGTTGGAATAGAGGTAATATTCTAGAGGCAAGAGATCAAAAATTGAGTAACGATTTTGTAGTTGGGGAAGTGGAATTGGTGTTGAAGCTTGCATTATTGTGCTCTTGTTCGCAGCCTGCAGCCAGGCCAAGCATGCGACAAGTGATGCAGTATTTGGAGGGTGATATTGCTCTCCCGGAGTTGTCACTTCTTCGGCTCTCTTCGAGTGGTTTAGTATTTGTGCATGATGAAGGTCCTGATGATGTTGAAATGGCGTATCAGTGTTCATATGTTCCCGAGTCTACTCTCCTCTCAGGTGGTCGCTGA

Protein Analysis

666

Amino Acids

73.87

Weight (kDa)

7.16

Isoelectric Point (pI)

33.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 276 1.3e-79 Legume lectin domain
Lectin_L-type_dom PF18483 40 - 249 2.9e-07 Legume lectin beta-barrel domain
Pkinase PF00069 348 - 615 5.1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 350 - 616 7.8e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 836
Acc65I GGTACC 2 cut(s) 46, 605
AccB1I GGYRCC 2 cut(s) 46, 605
AccB7I CCANNNNNTGG 1 cut(s) 370
AccI GTMKAC 1 cut(s) 1976
AccII CGCG 1 cut(s) 449
AciI CCGC 2 cut(s) 243, 449
AclWI GGATC 2 cut(s) 852, 865
AcoI YGGCCR 5 cut(s) 97, 190, 793, 1189, 1567
AcsI RAATTY 3 cut(s) 400, 1163, 1207
AcuI CTGAAG 1 cut(s) 1347
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 8 cut(s) 30, 48, 290, 368, 545, 607, 1010, 1215
AfiI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1035
AhlI ACTAGT 1 cut(s) 25
AjnI CCWGG 3 cut(s) 369, 873, 1817
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 1589
Alw21I GWGCWC 3 cut(s) 355, 1586, 1799
Alw26I GTCTC 2 cut(s) 158, 391
AlwI GGATC 2 cut(s) 852, 865
AlwNI CAGNNNCTG 2 cut(s) 370, 1508
Ama87I CYCGRG 1 cut(s) 1970
ApeKI GCWGC 4 cut(s) 303, 515, 1807, 1814
ApoI RAATTY 3 cut(s) 400, 1163, 1207
Asp718I GGTACC 2 cut(s) 46, 605
AspLEI GCGC 1 cut(s) 504
AspS9I GGNCC 5 cut(s) 373, 439, 992, 1655, 1928
AsuC2I CCSGG 2 cut(s) 348, 1871
AsuHPI GGTGA 5 cut(s) 397, 862, 1193, 1256, 1868
AvaI CYCGRG 1 cut(s) 1970
AvaII GGWCC 4 cut(s) 439, 992, 1655, 1928
BalI TGGCCA 2 cut(s) 192, 795
BamHI GGATCC 1 cut(s) 857
BanI GGYRCC 2 cut(s) 46, 605
BanII GRGCYC 1 cut(s) 355
BauI CACGAG 1 cut(s) 1579
BbsI GAAGAC 1 cut(s) 1465
Bbv12I GWGCWC 3 cut(s) 355, 1586, 1799
BbvI GCAGC 4 cut(s) 315, 502, 1819, 1826
BccI CCATC 3 cut(s) 284, 530, 596
BceAI ACGGC 4 cut(s) 84, 142, 291, 1554
BciT130I CCWGG 3 cut(s) 371, 875, 1819
BcnI CCSGG 2 cut(s) 348, 1871
BcoDI GTCTC 2 cut(s) 158, 391
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 8 cut(s) 26, 122, 837, 911, 983, 1439, 1463, 1718
BfmI CTRYAG 2 cut(s) 744, 1812
BfuAI ACCTGC 1 cut(s) 836
BisI GCNGC 5 cut(s) 243, 304, 516, 1808, 1815
BlsI GCNGC 5 cut(s) 244, 305, 517, 1809, 1816
BmcAI AGTACT 2 cut(s) 30, 545
Bme1390I CCNGG 5 cut(s) 348, 371, 875, 1819, 1871
Bme18I GGWCC 4 cut(s) 439, 992, 1655, 1928
BmeT110I CYCGRG 1 cut(s) 1970
BmgT120I GGNCC 5 cut(s) 373, 439, 992, 1655, 1928
BmiI GGNNCC 4 cut(s) 48, 607, 636, 859
BmrFI CCNGG 5 cut(s) 348, 371, 875, 1819, 1871
BmrI ACTGGG 2 cut(s) 206, 1074
BmsI GCATC 1 cut(s) 1830
BmuI ACTGGG 2 cut(s) 206, 1074
BpiI GAAGAC 1 cut(s) 1465
BpmI CTGGAG 2 cut(s) 504, 1348
BpuEI CTTGAG 1 cut(s) 786
BpuMI CCSGG 2 cut(s) 348, 1871
BsaBI GATNNNNATC 1 cut(s) 488
BsaHI GRCGYC 1 cut(s) 240
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 5 cut(s) 307, 346, 370, 873, 1495
BsaWI WCCGGW 1 cut(s) 1203
BsaXI ACNNNNNCTCC 4 cut(s) 619, 649, 971, 1001
Bsc4I CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1035
Bse118I RCCGGY 2 cut(s) 1191, 1565
Bse1I ACTGG 6 cut(s) 212, 364, 567, 1069, 1331, 1425
Bse3DI GCAATG 1 cut(s) 840
Bse8I GATNNNNATC 1 cut(s) 488
BseBI CCWGG 3 cut(s) 371, 875, 1819
BseDI CCNNGG 5 cut(s) 307, 346, 370, 873, 1495
BseGI GGATG 6 cut(s) 276, 755, 792, 883, 1161, 1669
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1035
BseMI GCAATG 1 cut(s) 840
BseMII CTCAG 3 cut(s) 130, 1010, 2001
BseNI ACTGG 6 cut(s) 212, 364, 567, 1069, 1331, 1425
BseRI GAGGAG 2 cut(s) 1093, 1973
BseX3I CGGCCG 1 cut(s) 1567
BseXI GCAGC 4 cut(s) 315, 502, 1819, 1826
Bsh1236I CGCG 1 cut(s) 449
Bsh1285I CGRYCG 1 cut(s) 1570
BshNI GGYRCC 2 cut(s) 46, 605
BsiEI CGRYCG 1 cut(s) 1570
BsiHKAI GWGCWC 3 cut(s) 355, 1586, 1799
BsiHKCI CYCGRG 1 cut(s) 1970
BsiSI CCGG 5 cut(s) 348, 1192, 1204, 1566, 1871
BslI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1035
BsmAI GTCTC 2 cut(s) 158, 391
BsmBI CGTCTC 1 cut(s) 391
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 1970
Bsp1286I GDGCHC 3 cut(s) 355, 1586, 1799
Bsp143I GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
BspACI CCGC 2 cut(s) 243, 449
BspCNI CTCAG 3 cut(s) 129, 1009, 2000
BspFNI CGCG 1 cut(s) 449
BspHI TCATGA 1 cut(s) 1381
BspLI GGNNCC 4 cut(s) 48, 607, 636, 859
BspMAI CTGCAG 1 cut(s) 1816
BspMI ACCTGC 1 cut(s) 836
BspPI GGATC 2 cut(s) 852, 865
BspT107I GGYRCC 2 cut(s) 46, 605
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 840
BsrFI RCCGGY 2 cut(s) 1191, 1565
BsrI ACTGG 6 cut(s) 212, 364, 567, 1069, 1331, 1425
BssAI RCCGGY 2 cut(s) 1191, 1565
BssECI CCNNGG 5 cut(s) 307, 346, 370, 873, 1495
BssMI GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
BssNI GRCGYC 1 cut(s) 240
BssSI CACGAG 1 cut(s) 1579
Bst2BI CACGAG 1 cut(s) 1579
Bst2UI CCWGG 3 cut(s) 371, 875, 1819
Bst4CI ACNGT 3 cut(s) 439, 1221, 1496
Bst6I CTCTTC 4 cut(s) 739, 941, 1121, 1900
BstACI GRCGYC 1 cut(s) 240
BstC8I GCNNGC 8 cut(s) 500, 1193, 1235, 1528, 1557, 1785, 1812, 1829
BstDEI CTNAG 3 cut(s) 116, 996, 1987
BstDSI CCRYGG 2 cut(s) 307, 1495
BstF5I GGATG 6 cut(s) 276, 755, 792, 883, 1161, 1669
BstFNI CGCG 1 cut(s) 449
BstHHI GCGC 1 cut(s) 504
BstKTI GATC 6 cut(s) 141, 284, 860, 1119, 1684, 1732
BstMAI GTCTC 2 cut(s) 158, 391
BstMBI GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
BstMCI CGRYCG 1 cut(s) 1570
BstMWI GCNNNNNNNGC 2 cut(s) 521, 1828
BstNI CCWGG 3 cut(s) 371, 875, 1819
BstNSI RCATGY 3 cut(s) 1273, 1559, 1831
BstSCI CCNGG 5 cut(s) 346, 369, 873, 1817, 1869
BstSFI CTRYAG 2 cut(s) 744, 1812
BstUI CGCG 1 cut(s) 449
BstV1I GCAGC 4 cut(s) 315, 502, 1819, 1826
BstV2I GAAGAC 1 cut(s) 1465
BstX2I RGATCY 1 cut(s) 857
BstYI RGATCY 1 cut(s) 857
BstZI CGGCCG 1 cut(s) 1567
BtgI CCRYGG 2 cut(s) 307, 1495
BtgZI GCGATG 1 cut(s) 310
BtsCI GGATG 6 cut(s) 276, 755, 792, 883, 1161, 1669
BtsI GCAGTG 1 cut(s) 1128
BtsIMutI CAGTG 4 cut(s) 219, 574, 1128, 1961
BveI ACCTGC 1 cut(s) 836
Cac8I GCNNGC 8 cut(s) 500, 1193, 1235, 1528, 1557, 1785, 1812, 1829
CaiI CAGNNNCTG 2 cut(s) 370, 1508
CciI TCATGA 1 cut(s) 1381
CfoI GCGC 1 cut(s) 504
Cfr10I RCCGGY 2 cut(s) 1191, 1565
Cfr13I GGNCC 5 cut(s) 373, 439, 992, 1655, 1928
CseI GACGC 1 cut(s) 248
Csp6I GTAC 8 cut(s) 29, 47, 289, 367, 544, 606, 1009, 1214
CviQI GTAC 8 cut(s) 29, 47, 289, 367, 544, 606, 1009, 1214
DdeI CTNAG 3 cut(s) 116, 996, 1987
DpnI GATC 6 cut(s) 140, 283, 859, 1118, 1683, 1731
DpnII GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
EaeI YGGCCR 5 cut(s) 97, 190, 793, 1189, 1567
EagI CGGCCG 1 cut(s) 1567
Eam1104I CTCTTC 4 cut(s) 739, 941, 1121, 1900
EarI CTCTTC 4 cut(s) 739, 941, 1121, 1900
Ecl136II GAGCTC 1 cut(s) 353
EclXI CGGCCG 1 cut(s) 1567
Eco147I AGGCCT 1 cut(s) 342
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 1669
Eco47I GGWCC 4 cut(s) 439, 992, 1655, 1928
Eco52I CGGCCG 1 cut(s) 1567
Eco53kI GAGCTC 1 cut(s) 353
Eco57I CTGAAG 1 cut(s) 1347
Eco88I CYCGRG 1 cut(s) 1970
EcoICRI GAGCTC 1 cut(s) 353
EcoO109I RGGNCCY 1 cut(s) 1928
EcoRII CCWGG 3 cut(s) 369, 873, 1817
EcoRV GATATC 1 cut(s) 1669
EcoT38I GRGCYC 1 cut(s) 355
Esp3I CGTCTC 1 cut(s) 391
FauNDI CATATG 1 cut(s) 1963
FblI GTMKAC 1 cut(s) 1976
Fnu4HI GCNGC 5 cut(s) 243, 304, 516, 1808, 1815
FokI GGATG 6 cut(s) 263, 742, 799, 890, 1168, 1676
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 5 cut(s) 243, 304, 516, 1808, 1815
FspBI CTAG 8 cut(s) 26, 122, 837, 911, 983, 1439, 1463, 1718
GlaI GCGC 1 cut(s) 503
GluI GCNGC 5 cut(s) 243, 304, 516, 1808, 1815
GsuI CTGGAG 2 cut(s) 504, 1348
HapII CCGG 5 cut(s) 348, 1192, 1204, 1566, 1871
HgaI GACGC 1 cut(s) 248
HhaI GCGC 1 cut(s) 504
Hin1I GRCGYC 1 cut(s) 240
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HindIII AAGCTT 1 cut(s) 1781
HinfI GANTC 8 cut(s) 312, 559, 1142, 1318, 1330, 1344, 1405, 1973
HpaII CCGG 5 cut(s) 348, 1192, 1204, 1566, 1871
HphI GGTGA 5 cut(s) 397, 862, 1193, 1256, 1868
Hpy166II GTNNAC 2 cut(s) 1247, 1977
Hpy188I TCNGA 6 cut(s) 232, 281, 286, 333, 888, 999
Hpy8I GTNNAC 2 cut(s) 1247, 1977
Hpy99I CGWCG 2 cut(s) 242, 337
HpyCH4III ACNGT 3 cut(s) 439, 1221, 1496
HpyCH4IV ACGT 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 2 cut(s) 521, 1828
HpyF3I CTNAG 3 cut(s) 116, 996, 1987
HpySE526I ACGT 1 cut(s) 384
Hsp92I GRCGYC 1 cut(s) 240
HspAI GCGC 1 cut(s) 502
KpnI GGTACC 2 cut(s) 50, 609
KroI GCCGGC 1 cut(s) 1191
KroNI GCCGGC 1 cut(s) 1193
Kzo9I GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
LmnI GCTCC 7 cut(s) 334, 350, 427, 523, 640, 777, 979
Lsp1109I GCAGC 4 cut(s) 315, 502, 1819, 1826
LweI GCATC 1 cut(s) 1830
MaeI CTAG 8 cut(s) 26, 122, 837, 911, 983, 1439, 1463, 1718
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 9 cut(s) 163, 214, 458, 625, 1199, 1315, 1490, 1742, 1878
MalI GATC 6 cut(s) 140, 283, 859, 1118, 1683, 1731
MboI GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
MflI RGATCY 1 cut(s) 857
MhlI GDGCHC 3 cut(s) 355, 1586, 1799
MlsI TGGCCA 2 cut(s) 192, 795
MluNI TGGCCA 2 cut(s) 192, 795
MlyI GAGTC 5 cut(s) 553, 1312, 1339, 1353, 1982
MmeI TCCRAC 4 cut(s) 356, 414, 755, 1679
Mox20I TGGCCA 2 cut(s) 192, 795
MroNI GCCGGC 1 cut(s) 1191
MscI TGGCCA 2 cut(s) 192, 795
MseI TTAA 3 cut(s) 111, 1005, 1323
MslI CAYNNNNRTG 3 cut(s) 1413, 1589, 1792
Msp20I TGGCCA 2 cut(s) 192, 795
MspA1I CMGCKG 1 cut(s) 524
MspI CCGG 5 cut(s) 348, 1192, 1204, 1566, 1871
MspR9I CCNGG 5 cut(s) 348, 371, 875, 1819, 1871
MvaI CCWGG 3 cut(s) 371, 875, 1819
MvnI CGCG 1 cut(s) 449
MwoI GCNNNNNNNGC 2 cut(s) 521, 1828
NaeI GCCGGC 1 cut(s) 1193
NciI CCSGG 2 cut(s) 348, 1871
NdeI CATATG 1 cut(s) 1963
NdeII GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
NgoMIV GCCGGC 1 cut(s) 1191
NlaIV GGNNCC 4 cut(s) 48, 607, 636, 859
NmuCI GTSAC 6 cut(s) 214, 458, 1199, 1315, 1490, 1878
NspI RCATGY 3 cut(s) 1273, 1559, 1831
OliI CACNNNNGTG 1 cut(s) 1589
PaeI GCATGC 2 cut(s) 1559, 1831
PagI TCATGA 1 cut(s) 1381
PceI AGGCCT 1 cut(s) 342
PdiI GCCGGC 1 cut(s) 1193
PfeI GAWTC 3 cut(s) 312, 1142, 1405
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 370
PfoI TCCNGGA 1 cut(s) 1869
PkrI GCNGC 5 cut(s) 244, 305, 517, 1809, 1816
PleI GAGTC 5 cut(s) 553, 1312, 1338, 1352, 1981
PpsI GAGTC 5 cut(s) 553, 1312, 1338, 1352, 1981
PpuMI RGGWCCY 1 cut(s) 1928
Psp124BI GAGCTC 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 1928
Psp6I CCWGG 3 cut(s) 369, 873, 1817
PspGI CCWGG 3 cut(s) 369, 873, 1817
PspN4I GGNNCC 4 cut(s) 48, 607, 636, 859
PspPI GGNCC 5 cut(s) 373, 439, 992, 1655, 1928
PspPPI RGGWCCY 1 cut(s) 1928
PstI CTGCAG 1 cut(s) 1816
PstNI CAGNNNCTG 2 cut(s) 370, 1508
PsuI RGATCY 1 cut(s) 857
PsyI GACNNNGTC 1 cut(s) 437
PvuII CAGCTG 1 cut(s) 524
RsaI GTAC 8 cut(s) 30, 48, 290, 368, 545, 607, 1010, 1215
RsaNI GTAC 8 cut(s) 29, 47, 289, 367, 544, 606, 1009, 1214
RseI CAYNNNNRTG 3 cut(s) 1413, 1589, 1792
SacI GAGCTC 1 cut(s) 355
SaqAI TTAA 3 cut(s) 111, 1005, 1323
SatI GCNGC 5 cut(s) 243, 304, 516, 1808, 1815
Sau3AI GATC 6 cut(s) 138, 281, 857, 1116, 1681, 1729
Sau96I GGNCC 5 cut(s) 373, 439, 992, 1655, 1928
ScaI AGTACT 2 cut(s) 30, 545
SchI GAGTC 5 cut(s) 553, 1312, 1339, 1353, 1982
ScrFI CCNGG 5 cut(s) 348, 371, 875, 1819, 1871
SduI GDGCHC 3 cut(s) 355, 1586, 1799
SfaNI GCATC 1 cut(s) 1830
SfcI CTRYAG 2 cut(s) 744, 1812
SinI GGWCC 4 cut(s) 439, 992, 1655, 1928
SmiMI CAYNNNNRTG 3 cut(s) 1413, 1589, 1792
SmlI CTYRAG 1 cut(s) 801
SmoI CTYRAG 1 cut(s) 801
SpeI ACTAGT 1 cut(s) 25
SphI GCATGC 2 cut(s) 1559, 1831
SseBI AGGCCT 1 cut(s) 342
SsiI CCGC 2 cut(s) 243, 449
SspI AATATT 1 cut(s) 1714
SspMI CTAG 8 cut(s) 26, 122, 837, 911, 983, 1439, 1463, 1718
SstI GAGCTC 1 cut(s) 355
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 5 cut(s) 346, 369, 873, 1817, 1869
TaaI ACNGT 3 cut(s) 439, 1221, 1496
TaiI ACGT 1 cut(s) 387
TaqI TCGA 3 cut(s) 510, 1617, 1898
TatI WGTACW 4 cut(s) 28, 543, 1008, 1213
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 3 cut(s) 312, 1142, 1405
Tru1I TTAA 3 cut(s) 111, 1005, 1323
Tru9I TTAA 3 cut(s) 111, 1005, 1323
TscAI CASTG 4 cut(s) 219, 574, 1128, 1961
TseFI GTSAC 6 cut(s) 214, 458, 1199, 1315, 1490, 1878
TseI GCWGC 4 cut(s) 303, 515, 1807, 1814
Tsp45I GTSAC 6 cut(s) 214, 458, 1199, 1315, 1490, 1878
TspRI CASTG 4 cut(s) 219, 574, 1128, 1961
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 370
VpaK11BI GGWCC 4 cut(s) 439, 992, 1655, 1928
XapI RAATTY 3 cut(s) 400, 1163, 1207
XbaI TCTAGA 2 cut(s) 121, 1717
XceI RCATGY 3 cut(s) 1273, 1559, 1831
XmiI GTMKAC 1 cut(s) 1976
XspI CTAG 8 cut(s) 26, 122, 837, 911, 983, 1439, 1463, 1718
ZrmI AGTACT 2 cut(s) 30, 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.