Rw6G005390

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
8644763 .. 8657300
12538 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G005390.1

Sequence Viewer

Length: 2004 bp
ATGTTTGGCAAGCTTTCTGTTCTACTAGTACTACTTGTCAGTCTGGTACCAGCAGAAGCCCAAGACCTCAATTTCATCTACAATTCTGGTTTCAATGGCCGTTCTGGTCTTAATCTCAGTCTAGACGGCATGGCAGGGATCACACCAAAAGGTCTCTTGAAGCTTACAAACGACACCAAACAGGAAAGTGGCCATGCCTTCTACCCTAACCCAGTGACCTTCAAGAACTCAGAGAGCGACACCGCCTTCTCCTTCTCCACCAACTTTATCTTTGCCATCCGATCAGAGTACCCTCCTGTCAGCAGCCATGGAATCGCCTTTGTCATCGCTCCGACGAGAGGCCTCCCCGGAGCTCTGGCGTACCAGTACCTGGGCCTGTTCAACGACTCCAACAATGGGAATTTCACCAATCATGTTTTTGCTGTGGAGCTTGACACGGTCCAGAACGCGGAATTGAGTGACATCAATGAAAACCATGTTGGGATAGACATCAATGGCTTGCACTCTGTCAAAGCTGCTCCAGCTTTCTATTTTGATGGTCAGTACTTCAAGAACCTGACTCTTGTCAGTGGTAAAGAAATGAGAGTTTGGGTTGAATATGATGGTACCAAGAAGCAAATTGAAGTTACTATGGCTCCAATTGCTGTTGCAACTAAACCCCCAACTCCACTTATGTCTTTGAAATATGACCTTTCCCCAATTCTCAACAAAACCATGTATATTGGCTTTTCCTCTTCAACTGCTAGAGCCCCCCCCACATCCCATTATGTAGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGAGGTCCATGGTTTTCACCTATGGTGTGCCTCTGATTTCAGTGAGCTTGGTTTTGCTAGTGGCTTCTGGGGTGGTTTATGTCATAAGAAGGAAGAGGAAGTTTGCAGAAGTGCTTGAAGATTGGGAGCTAGAGTATGGTCCTCACAGGTTTAAGTACAAAGAATTGTATATAGCCACTAATGGGTTTAGGGAAAATGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTATACAGAGGTTCATTACCCTCCTCTAAAATTGAGATCGCAGTGAAGAGGGTATCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATTTAGTACAACTGTTGGGATATTGCAGGCGAAAGGGTGAACTACTGTTGGTGTATGACTACATGCCTAATGGTAGTTTGGATAAGTACCTCTACAACCAACCGAATGTGACTCTTAACTGGAGTCAGAGGTTTAGAGTCATCAAAGGTGTGGCTTCAGGGTTGTTCTATCTTCATGAAGAATGGGAACATGTAGTGATTCATAGAGATGTGAAGGCCAATAATGTGCTACTAGACAAGGATTTCAATGGAAGACTAGGAGATTTTGGACTTGCAAGATTATGTGACCGTGGAACAGACCCTCAAACTACTCATGTAGCTGGCACACTTGGGTATATAGCCCCAGAGCATGCAAGAACCGGCCGTGCCACCACGAGCACAGATGTGTTTTCTTTCGGGGCATTTTTGCTCGAAGTTACCTGTGGAAGAAGGCCAATAGAGAGACAAGGACCAAAGGACGATATCGTTTTGGTTGATCGGGTTTTTTCGTGTTGGAATAGAGGTAATATTCTAGAGGCAAGAGATCAAAAATTGAGTAACGATTTTGTAGTTGGGGAAGTGGAATTGGTGTTGAAGCTTGCATTATTGTGCTCTTGTTCGGAGCCTGCAGCCAGGCCAAGCATGCGACAAGTGATGCAGTATTTGGAGGGTGATATTGCTCTCCCGGAGTTGTCACTTCTTCGGCTCTCTTCGATTGGTTTAGTATTTGTGCATGATGAAGGTCCTGATGATGTTGAAATGGTGTATCAGTGTTCACATGTTCCCGAGTCGATTCTCCTCTCAGGTGGTCGCTGA

Protein Analysis

667

Amino Acids

74.16

Weight (kDa)

8.26

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 277 7.6e-81 Legume lectin domain
Lectin_L-type_dom PF18483 41 - 248 2.7e-07 Legume lectin beta-barrel domain
Pkinase PF00069 349 - 616 1.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 351 - 617 1.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 839
Acc65I GGTACC 2 cut(s) 46, 605
AccB1I GGYRCC 2 cut(s) 46, 605
AccB7I CCANNNNNTGG 1 cut(s) 370
AccI GTMKAC 1 cut(s) 1086
AccII CGCG 1 cut(s) 449
AciI CCGC 2 cut(s) 243, 449
AclWI GGATC 1 cut(s) 146
AcoI YGGCCR 5 cut(s) 97, 190, 796, 1192, 1570
AcsI RAATTY 3 cut(s) 400, 1166, 1210
AcuI CTGAAG 1 cut(s) 1350
AfiI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1038
AflIII ACRYGT 2 cut(s) 1399, 1966
AhlI ACTAGT 1 cut(s) 25
AjnI CCWGG 2 cut(s) 369, 1820
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 1592
Alw21I GWGCWC 3 cut(s) 355, 1589, 1802
Alw26I GTCTC 2 cut(s) 158, 1645
AlwI GGATC 1 cut(s) 146
AlwNI CAGNNNCTG 1 cut(s) 370
Ama87I CYCGRG 1 cut(s) 1973
ApeKI GCWGC 3 cut(s) 303, 515, 1817
ApoI RAATTY 3 cut(s) 400, 1166, 1210
Asp718I GGTACC 2 cut(s) 46, 605
AspS9I GGNCC 6 cut(s) 373, 439, 861, 995, 1658, 1931
AsuC2I CCSGG 2 cut(s) 348, 1874
AsuHPI GGTGA 5 cut(s) 397, 865, 1196, 1259, 1871
AvaI CYCGRG 1 cut(s) 1973
AvaII GGWCC 5 cut(s) 439, 861, 995, 1658, 1931
BalI TGGCCA 2 cut(s) 192, 798
BanI GGYRCC 2 cut(s) 46, 605
BanII GRGCYC 2 cut(s) 355, 751
BauI CACGAG 1 cut(s) 1582
BbsI GAAGAC 1 cut(s) 1468
Bbv12I GWGCWC 3 cut(s) 355, 1589, 1802
BbvI GCAGC 3 cut(s) 315, 502, 1829
BccI CCATC 3 cut(s) 284, 530, 596
BceAI ACGGC 3 cut(s) 84, 142, 1557
BciT130I CCWGG 2 cut(s) 371, 1822
BcnI CCSGG 2 cut(s) 348, 1874
BcoDI GTCTC 2 cut(s) 158, 1645
BcuI ACTAGT 1 cut(s) 25
BfaI CTAG 9 cut(s) 26, 122, 744, 840, 914, 986, 1442, 1466, 1721
BfmI CTRYAG 1 cut(s) 1815
BfuAI ACCTGC 1 cut(s) 839
BisI GCNGC 3 cut(s) 304, 516, 1818
BlsI GCNGC 3 cut(s) 305, 517, 1819
BmcAI AGTACT 2 cut(s) 30, 545
Bme1390I CCNGG 4 cut(s) 348, 371, 1822, 1874
Bme18I GGWCC 5 cut(s) 439, 861, 995, 1658, 1931
BmeT110I CYCGRG 1 cut(s) 1973
BmgT120I GGNCC 6 cut(s) 373, 439, 861, 995, 1658, 1931
BmiI GGNNCC 4 cut(s) 48, 607, 636, 1812
BmrFI CCNGG 4 cut(s) 348, 371, 1822, 1874
BmrI ACTGGG 2 cut(s) 206, 1077
BmsI GCATC 1 cut(s) 1833
BmuI ACTGGG 2 cut(s) 206, 1077
BoxI GACNNNNGTC 1 cut(s) 563
BpiI GAAGAC 1 cut(s) 1468
BpmI CTGGAG 2 cut(s) 504, 1351
BpuEI CTTGAG 1 cut(s) 789
BpuMI CCSGG 2 cut(s) 348, 1874
BsaBI GATNNNNATC 1 cut(s) 488
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 5 cut(s) 307, 346, 370, 864, 1498
BsaWI WCCGGW 1 cut(s) 1206
BsaXI ACNNNNNCTCC 4 cut(s) 619, 649, 974, 1004
Bsc4I CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1038
Bse118I RCCGGY 2 cut(s) 1194, 1568
Bse1I ACTGG 4 cut(s) 212, 364, 1072, 1334
Bse3DI GCAATG 1 cut(s) 843
Bse8I GATNNNNATC 1 cut(s) 488
BseBI CCWGG 2 cut(s) 371, 1822
BseDI CCNNGG 5 cut(s) 307, 346, 370, 864, 1498
BseGI GGATG 4 cut(s) 276, 758, 795, 1164
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1038
BseMI GCAATG 1 cut(s) 843
BseMII CTCAG 3 cut(s) 130, 243, 2004
BseNI ACTGG 4 cut(s) 212, 364, 1072, 1334
BseRI GAGGAG 2 cut(s) 1096, 1976
BseX3I CGGCCG 1 cut(s) 1570
BseXI GCAGC 3 cut(s) 315, 502, 1829
Bsh1236I CGCG 1 cut(s) 449
Bsh1285I CGRYCG 1 cut(s) 1573
BshNI GGYRCC 2 cut(s) 46, 605
BsiEI CGRYCG 1 cut(s) 1573
BsiHKAI GWGCWC 3 cut(s) 355, 1589, 1802
BsiHKCI CYCGRG 1 cut(s) 1973
BsiSI CCGG 5 cut(s) 348, 1195, 1207, 1569, 1874
BslI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1038
BsmAI GTCTC 2 cut(s) 158, 1645
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 1973
Bsp1286I GDGCHC 4 cut(s) 355, 751, 1589, 1802
Bsp143I GATC 5 cut(s) 138, 281, 1119, 1684, 1732
Bsp19I CCATGG 2 cut(s) 307, 864
BspACI CCGC 2 cut(s) 243, 449
BspCNI CTCAG 3 cut(s) 129, 242, 2003
BspFNI CGCG 1 cut(s) 449
BspHI TCATGA 1 cut(s) 1384
BspLI GGNNCC 4 cut(s) 48, 607, 636, 1812
BspMAI CTGCAG 1 cut(s) 1819
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 1 cut(s) 146
BspT107I GGYRCC 2 cut(s) 46, 605
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 843
BsrFI RCCGGY 2 cut(s) 1194, 1568
BsrI ACTGG 4 cut(s) 212, 364, 1072, 1334
BssAI RCCGGY 2 cut(s) 1194, 1568
BssECI CCNNGG 5 cut(s) 307, 346, 370, 864, 1498
BssMI GATC 5 cut(s) 138, 281, 1119, 1684, 1732
BssNAI GTATAC 1 cut(s) 1087
BssSI CACGAG 1 cut(s) 1582
BssT1I CCWWGG 2 cut(s) 307, 864
Bst1107I GTATAC 1 cut(s) 1087
Bst2BI CACGAG 1 cut(s) 1582
Bst2UI CCWGG 2 cut(s) 371, 1822
Bst4CI ACNGT 4 cut(s) 439, 1224, 1257, 1499
Bst6I CTCTTC 4 cut(s) 739, 944, 1124, 1903
BstC8I GCNNGC 9 cut(s) 11, 500, 1196, 1238, 1531, 1560, 1788, 1815, 1832
BstDEI CTNAG 3 cut(s) 116, 229, 1990
BstDSI CCRYGG 3 cut(s) 307, 864, 1498
BstF5I GGATG 4 cut(s) 276, 758, 795, 1164
BstFNI CGCG 1 cut(s) 449
BstKTI GATC 5 cut(s) 141, 284, 1122, 1687, 1735
BstMAI GTCTC 2 cut(s) 158, 1645
BstMBI GATC 5 cut(s) 138, 281, 1119, 1684, 1732
BstMCI CGRYCG 1 cut(s) 1573
BstMWI GCNNNNNNNGC 3 cut(s) 521, 641, 1831
BstNI CCWGG 2 cut(s) 371, 1822
BstNSI RCATGY 5 cut(s) 1276, 1403, 1562, 1834, 1970
BstPAI GACNNNNGTC 1 cut(s) 563
BstSCI CCNGG 4 cut(s) 346, 369, 1820, 1872
BstSFI CTRYAG 1 cut(s) 1815
BstUI CGCG 1 cut(s) 449
BstV1I GCAGC 3 cut(s) 315, 502, 1829
BstV2I GAAGAC 1 cut(s) 1468
BstZ17I GTATAC 1 cut(s) 1087
BstZI CGGCCG 1 cut(s) 1570
BtgI CCRYGG 3 cut(s) 307, 864, 1498
BtgZI GCGATG 1 cut(s) 310
BtsCI GGATG 4 cut(s) 276, 758, 795, 1164
BtsI GCAGTG 1 cut(s) 1131
BtsIMutI CAGTG 5 cut(s) 219, 574, 903, 1131, 1964
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 9 cut(s) 11, 500, 1196, 1238, 1531, 1560, 1788, 1815, 1832
CaiI CAGNNNCTG 1 cut(s) 370
CciI TCATGA 1 cut(s) 1384
Cfr10I RCCGGY 2 cut(s) 1194, 1568
Cfr13I GGNCC 6 cut(s) 373, 439, 861, 995, 1658, 1931
DdeI CTNAG 3 cut(s) 116, 229, 1990
DpnI GATC 5 cut(s) 140, 283, 1121, 1686, 1734
DpnII GATC 5 cut(s) 138, 281, 1119, 1684, 1732
EaeI YGGCCR 5 cut(s) 97, 190, 796, 1192, 1570
EagI CGGCCG 1 cut(s) 1570
Eam1104I CTCTTC 4 cut(s) 739, 944, 1124, 1903
EarI CTCTTC 4 cut(s) 739, 944, 1124, 1903
Ecl136II GAGCTC 1 cut(s) 353
EclXI CGGCCG 1 cut(s) 1570
Eco130I CCWWGG 2 cut(s) 307, 864
Eco147I AGGCCT 1 cut(s) 342
Eco24I GRGCYC 2 cut(s) 355, 751
Eco31I GGTCTC 1 cut(s) 158
Eco32I GATATC 1 cut(s) 1672
Eco47I GGWCC 5 cut(s) 439, 861, 995, 1658, 1931
Eco52I CGGCCG 1 cut(s) 1570
Eco53kI GAGCTC 1 cut(s) 353
Eco57I CTGAAG 1 cut(s) 1350
Eco88I CYCGRG 1 cut(s) 1973
EcoICRI GAGCTC 1 cut(s) 353
EcoO109I RGGNCCY 1 cut(s) 1931
EcoRII CCWGG 2 cut(s) 369, 1820
EcoRV GATATC 1 cut(s) 1672
EcoT14I CCWWGG 2 cut(s) 307, 864
EcoT38I GRGCYC 2 cut(s) 355, 751
ErhI CCWWGG 2 cut(s) 307, 864
FblI GTMKAC 1 cut(s) 1086
Fnu4HI GCNGC 3 cut(s) 304, 516, 1818
FokI GGATG 4 cut(s) 263, 745, 802, 1171
FriOI GRGCYC 2 cut(s) 355, 751
Fsp4HI GCNGC 3 cut(s) 304, 516, 1818
FspBI CTAG 9 cut(s) 26, 122, 744, 840, 914, 986, 1442, 1466, 1721
GluI GCNGC 3 cut(s) 304, 516, 1818
GsuI CTGGAG 2 cut(s) 504, 1351
HapII CCGG 5 cut(s) 348, 1195, 1207, 1569, 1874
HindIII AAGCTT 3 cut(s) 11, 161, 1784
HpaII CCGG 5 cut(s) 348, 1195, 1207, 1569, 1874
HphI GGTGA 5 cut(s) 397, 865, 1196, 1259, 1871
Hpy166II GTNNAC 3 cut(s) 1087, 1250, 1964
Hpy188I TCNGA 7 cut(s) 232, 281, 286, 333, 891, 1338, 1810
Hpy8I GTNNAC 3 cut(s) 1087, 1250, 1964
Hpy99I CGWCG 1 cut(s) 337
HpyAV CCTTC 9 cut(s) 208, 229, 256, 262, 939, 1156, 1417, 1632, 1922
HpyCH4III ACNGT 4 cut(s) 439, 1224, 1257, 1499
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 641, 1831
HpyF3I CTNAG 3 cut(s) 116, 229, 1990
KpnI GGTACC 2 cut(s) 50, 609
KroI GCCGGC 1 cut(s) 1194
KroNI GCCGGC 1 cut(s) 1196
Kzo9I GATC 5 cut(s) 138, 281, 1119, 1684, 1732
LmnI GCTCC 8 cut(s) 334, 350, 427, 523, 640, 780, 982, 1810
Lsp1109I GCAGC 3 cut(s) 315, 502, 1829
LweI GCATC 1 cut(s) 1833
MaeI CTAG 9 cut(s) 26, 122, 744, 840, 914, 986, 1442, 1466, 1721
MaeIII GTNAC 9 cut(s) 214, 458, 625, 1202, 1318, 1493, 1624, 1745, 1881
MalI GATC 5 cut(s) 140, 283, 1121, 1686, 1734
MboI GATC 5 cut(s) 138, 281, 1119, 1684, 1732
MfeI CAATTG 1 cut(s) 639
MhlI GDGCHC 4 cut(s) 355, 751, 1589, 1802
MlsI TGGCCA 2 cut(s) 192, 798
MluNI TGGCCA 2 cut(s) 192, 798
MlyI GAGTC 6 cut(s) 380, 553, 1315, 1342, 1356, 1985
MmeI TCCRAC 4 cut(s) 356, 414, 758, 1682
Mox20I TGGCCA 2 cut(s) 192, 798
MroNI GCCGGC 1 cut(s) 1194
MscI TGGCCA 2 cut(s) 192, 798
MseI TTAA 3 cut(s) 111, 1008, 1326
MslI CAYNNNNRTG 3 cut(s) 1416, 1592, 1795
Msp20I TGGCCA 2 cut(s) 192, 798
MspI CCGG 5 cut(s) 348, 1195, 1207, 1569, 1874
MspR9I CCNGG 4 cut(s) 348, 371, 1822, 1874
MunI CAATTG 1 cut(s) 639
MvaI CCWGG 2 cut(s) 371, 1822
MvnI CGCG 1 cut(s) 449
MwoI GCNNNNNNNGC 3 cut(s) 521, 641, 1831
NaeI GCCGGC 1 cut(s) 1196
NciI CCSGG 2 cut(s) 348, 1874
NcoI CCATGG 2 cut(s) 307, 864
NdeII GATC 5 cut(s) 138, 281, 1119, 1684, 1732
NgoMIV GCCGGC 1 cut(s) 1194
NlaIV GGNNCC 4 cut(s) 48, 607, 636, 1812
NmuCI GTSAC 6 cut(s) 214, 458, 1202, 1318, 1493, 1881
NspI RCATGY 5 cut(s) 1276, 1403, 1562, 1834, 1970
OliI CACNNNNGTG 1 cut(s) 1592
PaeI GCATGC 2 cut(s) 1562, 1834
PagI TCATGA 1 cut(s) 1384
PceI AGGCCT 1 cut(s) 342
PciI ACATGT 2 cut(s) 1399, 1966
PdiI GCCGGC 1 cut(s) 1196
PfeI GAWTC 4 cut(s) 312, 1145, 1408, 1981
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 370
PfoI TCCNGGA 1 cut(s) 1872
PkrI GCNGC 3 cut(s) 305, 517, 1819
PleI GAGTC 6 cut(s) 380, 553, 1315, 1341, 1355, 1984
PpsI GAGTC 6 cut(s) 380, 553, 1315, 1341, 1355, 1984
PpuMI RGGWCCY 1 cut(s) 1931
PscI ACATGT 2 cut(s) 1399, 1966
PshAI GACNNNNGTC 1 cut(s) 563
Psp124BI GAGCTC 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 1931
Psp6I CCWGG 2 cut(s) 369, 1820
PspGI CCWGG 2 cut(s) 369, 1820
PspN4I GGNNCC 4 cut(s) 48, 607, 636, 1812
PspPI GGNCC 6 cut(s) 373, 439, 861, 995, 1658, 1931
PspPPI RGGWCCY 1 cut(s) 1931
PstI CTGCAG 1 cut(s) 1819
PstNI CAGNNNCTG 1 cut(s) 370
PsyI GACNNNGTC 1 cut(s) 437
RseI CAYNNNNRTG 3 cut(s) 1416, 1592, 1795
SacI GAGCTC 1 cut(s) 355
SaqAI TTAA 3 cut(s) 111, 1008, 1326
SatI GCNGC 3 cut(s) 304, 516, 1818
Sau3AI GATC 5 cut(s) 138, 281, 1119, 1684, 1732
Sau96I GGNCC 6 cut(s) 373, 439, 861, 995, 1658, 1931
ScaI AGTACT 2 cut(s) 30, 545
SchI GAGTC 6 cut(s) 380, 553, 1315, 1342, 1356, 1985
ScrFI CCNGG 4 cut(s) 348, 371, 1822, 1874
SduI GDGCHC 4 cut(s) 355, 751, 1589, 1802
SfaNI GCATC 1 cut(s) 1833
SfcI CTRYAG 1 cut(s) 1815
SinI GGWCC 5 cut(s) 439, 861, 995, 1658, 1931
SmiMI CAYNNNNRTG 3 cut(s) 1416, 1592, 1795
SmlI CTYRAG 1 cut(s) 804
SmoI CTYRAG 1 cut(s) 804
SpeI ACTAGT 1 cut(s) 25
SphI GCATGC 2 cut(s) 1562, 1834
SseBI AGGCCT 1 cut(s) 342
SsiI CCGC 2 cut(s) 243, 449
SspI AATATT 1 cut(s) 1717
SspMI CTAG 9 cut(s) 26, 122, 744, 840, 914, 986, 1442, 1466, 1721
SstI GAGCTC 1 cut(s) 355
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 4 cut(s) 346, 369, 1820, 1872
StyI CCWWGG 2 cut(s) 307, 864
TaaI ACNGT 4 cut(s) 439, 1224, 1257, 1499
TaqI TCGA 3 cut(s) 1620, 1901, 1979
TatI WGTACW 4 cut(s) 28, 543, 1011, 1216
TfiI GAWTC 4 cut(s) 312, 1145, 1408, 1981
Tru1I TTAA 3 cut(s) 111, 1008, 1326
Tru9I TTAA 3 cut(s) 111, 1008, 1326
TscAI CASTG 5 cut(s) 219, 574, 903, 1131, 1964
TseFI GTSAC 6 cut(s) 214, 458, 1202, 1318, 1493, 1881
TseI GCWGC 3 cut(s) 303, 515, 1817
Tsp45I GTSAC 6 cut(s) 214, 458, 1202, 1318, 1493, 1881
TspRI CASTG 5 cut(s) 219, 574, 903, 1131, 1964
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 370
VpaK11BI GGWCC 5 cut(s) 439, 861, 995, 1658, 1931
XapI RAATTY 3 cut(s) 400, 1166, 1210
XbaI TCTAGA 2 cut(s) 121, 1720
XceI RCATGY 5 cut(s) 1276, 1403, 1562, 1834, 1970
XmiI GTMKAC 1 cut(s) 1086
XspI CTAG 9 cut(s) 26, 122, 744, 840, 914, 986, 1442, 1466, 1721
ZrmI AGTACT 2 cut(s) 30, 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.