Rh3BG145500

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000256
Physical Location & Seq
Forward (+)
12320404 .. 12326012
5609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG145500.1

Sequence Viewer

Length: 1896 bp
ATGTTTGTCAAGCTTTCTGTTCTACTTCTACTAGTATTACTTGTCAGTCTGGTACCAGCAGAAGCCCAAGACCTCAATTTCATCTACAATTCTGGTTTCAATGGCCATTCTGGTCTTAATCTCAGTGTAGACGGCATAGCAGAGATCACACCAAACGGTCTCTTGAAGCTTACAAACCACACCAAAGAGAGAAATGATAGAAGTGGTCATGCCTTCTACCCTAACCCAGTAACCTTCAAGAACTCAGAGAACGACACCGCCTTCTCCTTCTCCACCAACTTTGTCTTTGCCATCCAATCAGAGTACACTACTTTCAGCGGCCATGGAATCGTCTTTGTCATCTCTCCGACGAGGGGCCTCCCCGGAGCTCTGGCGAACCAGTACCTGGGCCTGTTCAACATCTCCAACAATGGGAATTTCACCAATCATGTTTTTGCTGTGGAGCTTGACACGATCCTGAACGCGGAATTCAGTGACATCAATGATAACCATGTTGGGATAGACATCAATGGCTTGCAGTCTGTCGAAGCTGCTCCAGCTGGTTATTATGATGGTCGGTACTTCAAGAACCTGAGTCTTATCAGTCGACAAGAAATGAGAGTTTGGGTTGAATATGATGGTACCAACAAGCAAATTGAAGTTACTATGGCTCCAATTGCTGTTGCAACTAAACCCCTAACTCCACTTCTGTCTTTGACATATGACCTTTCCCCAATTCTCAACAGAACCATGTATGTTGGCTTTTCGTCTTCAACTGGTCCGTTCCTCACATCCCATTATGTAGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTGAAAAGAGGTCCATGCTTTTCACCTTTGGTGTGCCTCTGATTTCCGTGAGTTTGGTTTTGCTACTGGTTTCTGGGGTGCTTTATGTCATAAATAGGAAGAGGAAGTTTGCAGAACTGCTTGAAGATTGGGAGCTAGAATATGGTCCTCAGAGGTTTAAGTACAAAGAATTGTATATAGCCACCAAAGGGTTTAAGGAAAAGGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTTTATAGAGGTTTATTACCCTCCTCTAAAATTGAGATTGCAGTGAAGAGGGTATCACATGAATCAGGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATATAGTACAGCTGTTGGGATATTGCAGTAATGGGAAACCAATTGAAAATCTTCGCCGCATCTTCTCAACATTCATGTATCACCGCCGTCTTTCTTTCCCACTGAATTTCACAGAAAAGCGACGGGAACTTACCGGCCGCAAGCTCAGAGTGATGCTGATTAAAATTAGAAGAGTGGTCAGAAAATACTACTACTACTACTCTGATTCAAAGGCAGATGAGAGGTGGTCTAATGGTCTCCCACAAGAAATCTTGCTATTGATTTTACAAAGTCTATGCATATCGGATTACCTTGGGGAACCAAGGATGTGTTTGTTGGCGAGCTGCTGTGGAGATGGGTGTTGCTACCAAGAGTTGCCTTCCTCATATTCTATATGTGCATCACTTTTGAAGGTTCAAACTCCCCCGCCCGTCACACTTTTAAGCGTCGGCCAGGTCGTCACCTTTTGGGAAAGGGAGATTGTTGACACCAAGAATTATACTTTCTTCACTGAGAAGTGGGAAGCAACACAAGATGATGATATAAGGCACTGGACCAAATTTCCTTCTTTTTCTGCTCTATTGAGCCAAGTGGAAGTTGGTGGCAAATCATTAGATCTCAGCAACTATCCATACATATTCATGAGATGGAAGGAGCAATACTTTGTGAATGTTGGCACAGACTGTACCTACTAG

Protein Analysis

631

Amino Acids

71.43

Weight (kDa)

8.7

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 25 - 281 4.2e-81 Legume lectin domain
Lectin_L-type_dom PF18483 45 - 259 1e-06 Legume lectin beta-barrel domain
Pkinase PF00069 352 - 420 7.3e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 354 - 422 1.1e-10 Protein tyrosine and serine/threonine kinase
Vac_ImportDeg PF09783 552 - 624 2e-18 Vacuolar import and degradation protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 851
Acc36I ACCTGC 1 cut(s) 851
Acc65I GGTACC 2 cut(s) 52, 620
AccB1I GGYRCC 2 cut(s) 52, 620
AccB7I CCANNNNNTGG 1 cut(s) 385
AccI GTMKAC 2 cut(s) 129, 586
AccII CGCG 1 cut(s) 464
AciI CCGC 7 cut(s) 258, 318, 464, 1279, 1306, 1360, 1628
AclWI GGATC 1 cut(s) 448
AcoI YGGCCR 6 cut(s) 103, 319, 808, 1204, 1357, 1651
AcsI RAATTY 5 cut(s) 415, 467, 1178, 1327, 1760
AfaI GTAC 8 cut(s) 54, 305, 383, 560, 622, 1025, 1230, 1888
AfiI CCNNNNNNNGG 5 cut(s) 353, 385, 411, 463, 1050
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 2 cut(s) 384, 1653
Alw21I GWGCWC 1 cut(s) 370
Alw26I GTCTC 2 cut(s) 164, 1463
AlwI GGATC 1 cut(s) 448
AlwNI CAGNNNCTG 1 cut(s) 385
AoxI GGCC 8 cut(s) 103, 319, 355, 388, 808, 1204, 1357, 1651
ApeKI GCWGC 2 cut(s) 530, 1545
ApoI RAATTY 5 cut(s) 415, 467, 1178, 1327, 1760
Asp700I GAANNNNTTC 1 cut(s) 1272
Asp718I GGTACC 2 cut(s) 52, 620
AspS9I GGNCC 6 cut(s) 355, 388, 758, 873, 1007, 1755
AsuC2I CCSGG 1 cut(s) 363
AsuHPI GGTGA 6 cut(s) 412, 875, 877, 1208, 1295, 1654
AvaII GGWCC 4 cut(s) 758, 873, 1007, 1755
BalI TGGCCA 2 cut(s) 105, 810
BanI GGYRCC 2 cut(s) 52, 620
BanII GRGCYC 1 cut(s) 370
BarI GAAGNNNNNNTAC 2 cut(s) 1844, 1876
BbsI GAAGAC 1 cut(s) 741
Bbv12I GWGCWC 1 cut(s) 370
BbvI GCAGC 2 cut(s) 517, 1532
BccI CCATC 5 cut(s) 299, 545, 611, 1550, 1842
BceAI ACGGC 2 cut(s) 148, 1293
BciT130I CCWGG 2 cut(s) 386, 1655
BcnI CCSGG 1 cut(s) 363
BcoDI GTCTC 2 cut(s) 164, 1463
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 4 cut(s) 32, 852, 998, 1894
BfuAI ACCTGC 1 cut(s) 851
BglII AGATCT 1 cut(s) 1816
BisI GCNGC 5 cut(s) 319, 531, 1279, 1360, 1546
BlsI GCNGC 5 cut(s) 320, 532, 1280, 1361, 1547
Bme1390I CCNGG 3 cut(s) 363, 386, 1655
Bme18I GGWCC 4 cut(s) 758, 873, 1007, 1755
BmgT120I GGNCC 6 cut(s) 355, 388, 758, 873, 1007, 1755
BmiI GGNNCC 5 cut(s) 54, 356, 622, 651, 1521
BmrFI CCNGG 3 cut(s) 363, 386, 1655
BmrI ACTGGG 2 cut(s) 221, 1089
BmsI GCATC 3 cut(s) 1290, 1365, 1610
BmuI ACTGGG 2 cut(s) 221, 1089
BpiI GAAGAC 1 cut(s) 741
BpmI CTGGAG 1 cut(s) 519
BpuEI CTTGAG 1 cut(s) 801
BpuMI CCSGG 1 cut(s) 363
BsaBI GATNNNNATC 1 cut(s) 503
BsaI GGTCTC 2 cut(s) 164, 1463
BsaJI CCNNGG 5 cut(s) 322, 361, 385, 1513, 1523
BsaWI WCCGGW 1 cut(s) 1218
BsaXI ACNNNNNCTCC 2 cut(s) 634, 664
Bsc4I CCNNNNNNNGG 5 cut(s) 353, 385, 411, 463, 1050
Bse118I RCCGGY 2 cut(s) 1206, 1355
Bse1I ACTGG 6 cut(s) 227, 379, 760, 933, 1084, 1757
Bse3DI GCAATG 1 cut(s) 855
Bse8I GATNNNNATC 1 cut(s) 503
BseBI CCWGG 2 cut(s) 386, 1655
BseDI CCNNGG 5 cut(s) 322, 361, 385, 1513, 1523
BseGI GGATG 5 cut(s) 291, 770, 807, 1176, 1533
BseJI GATNNNNATC 1 cut(s) 503
BseLI CCNNNNNNNGG 5 cut(s) 353, 385, 411, 463, 1050
BseMI GCAATG 1 cut(s) 855
BseMII CTCAG 7 cut(s) 136, 258, 563, 1025, 1381, 1704, 1834
BseNI ACTGG 6 cut(s) 227, 379, 760, 933, 1084, 1757
BseRI GAGGAG 1 cut(s) 1108
BseX3I CGGCCG 1 cut(s) 1357
BseXI GCAGC 2 cut(s) 517, 1532
Bsh1236I CGCG 1 cut(s) 464
Bsh1285I CGRYCG 1 cut(s) 1360
BshFI GGCC 8 cut(s) 105, 321, 357, 390, 810, 1206, 1359, 1653
BshNI GGYRCC 2 cut(s) 52, 620
BsiEI CGRYCG 1 cut(s) 1360
BsiHKAI GWGCWC 1 cut(s) 370
BsiSI CCGG 4 cut(s) 363, 1207, 1219, 1356
BslI CCNNNNNNNGG 5 cut(s) 353, 385, 411, 463, 1050
BsmAI GTCTC 2 cut(s) 164, 1463
BsnI GGCC 8 cut(s) 105, 321, 357, 390, 810, 1206, 1359, 1653
Bso31I GGTCTC 2 cut(s) 164, 1463
Bsp1286I GDGCHC 1 cut(s) 370
Bsp143I GATC 3 cut(s) 144, 453, 1816
Bsp19I CCATGG 1 cut(s) 322
BspACI CCGC 7 cut(s) 258, 318, 464, 1279, 1306, 1360, 1628
BspANI GGCC 8 cut(s) 105, 321, 357, 390, 810, 1206, 1359, 1653
BspCNI CTCAG 7 cut(s) 135, 257, 564, 1024, 1380, 1705, 1833
BspFNI CGCG 1 cut(s) 464
BspHI TCATGA 1 cut(s) 1842
BspLI GGNNCC 5 cut(s) 54, 356, 622, 651, 1521
BspMI ACCTGC 1 cut(s) 851
BspPI GGATC 1 cut(s) 448
BspT107I GGYRCC 2 cut(s) 52, 620
BspTNI GGTCTC 2 cut(s) 164, 1463
BsrDI GCAATG 1 cut(s) 855
BsrFI RCCGGY 2 cut(s) 1206, 1355
BsrI ACTGG 6 cut(s) 227, 379, 760, 933, 1084, 1757
BssAI RCCGGY 2 cut(s) 1206, 1355
BssECI CCNNGG 5 cut(s) 322, 361, 385, 1513, 1523
BssMI GATC 3 cut(s) 144, 453, 1816
BssT1I CCWWGG 3 cut(s) 322, 1513, 1523
Bst2UI CCWGG 2 cut(s) 386, 1655
Bst4CI ACNGT 2 cut(s) 158, 1886
Bst6I CTCTTC 3 cut(s) 956, 1136, 1387
BstC8I GCNNGC 4 cut(s) 515, 1208, 1364, 1543
BstDEI CTNAG 7 cut(s) 122, 244, 572, 1011, 1367, 1713, 1820
BstDSI CCRYGG 1 cut(s) 322
BstF5I GGATG 5 cut(s) 291, 770, 807, 1176, 1533
BstFNI CGCG 1 cut(s) 464
BstKTI GATC 3 cut(s) 147, 456, 1819
BstMAI GTCTC 2 cut(s) 164, 1463
BstMBI GATC 3 cut(s) 144, 453, 1816
BstMCI CGRYCG 1 cut(s) 1360
BstMWI GCNNNNNNNGC 2 cut(s) 536, 656
BstNI CCWGG 2 cut(s) 386, 1655
BstSCI CCNGG 3 cut(s) 361, 384, 1653
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 2 cut(s) 517, 1532
BstV2I GAAGAC 1 cut(s) 741
BstX2I RGATCY 1 cut(s) 1816
BstYI RGATCY 1 cut(s) 1816
BstZI CGGCCG 1 cut(s) 1357
BsuRI GGCC 8 cut(s) 105, 321, 357, 390, 810, 1206, 1359, 1653
BtgI CCRYGG 1 cut(s) 322
BtsCI GGATG 5 cut(s) 291, 770, 807, 1176, 1533
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 6 cut(s) 130, 478, 1143, 1322, 1710, 1750
BveI ACCTGC 1 cut(s) 851
Cac8I GCNNGC 4 cut(s) 515, 1208, 1364, 1543
CaiI CAGNNNCTG 1 cut(s) 385
CciI TCATGA 1 cut(s) 1842
Cfr10I RCCGGY 2 cut(s) 1206, 1355
Cfr13I GGNCC 6 cut(s) 355, 388, 758, 873, 1007, 1755
CseI GACGC 1 cut(s) 1636
Csp6I GTAC 8 cut(s) 53, 304, 382, 559, 621, 1024, 1229, 1887
CspCI CAANNNNNGTGG 2 cut(s) 262, 297
CviAII CATG 9 cut(s) 209, 323, 428, 491, 730, 877, 1154, 1297, 1843
CviQI GTAC 8 cut(s) 53, 304, 382, 559, 621, 1024, 1229, 1887
DdeI CTNAG 7 cut(s) 122, 244, 572, 1011, 1367, 1713, 1820
DpnI GATC 3 cut(s) 146, 455, 1818
DpnII GATC 3 cut(s) 144, 453, 1816
EaeI YGGCCR 6 cut(s) 103, 319, 808, 1204, 1357, 1651
EagI CGGCCG 1 cut(s) 1357
Eam1104I CTCTTC 3 cut(s) 956, 1136, 1387
EarI CTCTTC 3 cut(s) 956, 1136, 1387
Ecl136II GAGCTC 1 cut(s) 368
EclXI CGGCCG 1 cut(s) 1357
Eco130I CCWWGG 3 cut(s) 322, 1513, 1523
Eco24I GRGCYC 1 cut(s) 370
Eco31I GGTCTC 2 cut(s) 164, 1463
Eco47I GGWCC 4 cut(s) 758, 873, 1007, 1755
Eco52I CGGCCG 1 cut(s) 1357
Eco53kI GAGCTC 1 cut(s) 368
EcoICRI GAGCTC 1 cut(s) 368
EcoO109I RGGNCCY 1 cut(s) 355
EcoRI GAATTC 1 cut(s) 467
EcoRII CCWGG 2 cut(s) 384, 1653
EcoT14I CCWWGG 3 cut(s) 322, 1513, 1523
EcoT22I ATGCAT 1 cut(s) 1502
EcoT38I GRGCYC 1 cut(s) 370
ErhI CCWWGG 3 cut(s) 322, 1513, 1523
FaeI CATG 9 cut(s) 212, 326, 431, 494, 733, 880, 1157, 1300, 1846
FatI CATG 9 cut(s) 208, 322, 427, 490, 729, 876, 1153, 1296, 1842
FauI CCCGC 1 cut(s) 1635
FauNDI CATATG 1 cut(s) 700
FblI GTMKAC 2 cut(s) 129, 586
Fnu4HI GCNGC 5 cut(s) 319, 531, 1279, 1360, 1546
FokI GGATG 5 cut(s) 278, 757, 814, 1183, 1540
FriOI GRGCYC 1 cut(s) 370
Fsp4HI GCNGC 5 cut(s) 319, 531, 1279, 1360, 1546
FspBI CTAG 4 cut(s) 32, 852, 998, 1894
GluI GCNGC 5 cut(s) 319, 531, 1279, 1360, 1546
GsuI CTGGAG 1 cut(s) 519
HaeIII GGCC 8 cut(s) 105, 321, 357, 390, 810, 1206, 1359, 1653
HapII CCGG 4 cut(s) 363, 1207, 1219, 1356
HgaI GACGC 1 cut(s) 1636
Hin1II CATG 9 cut(s) 212, 326, 431, 494, 733, 880, 1157, 1300, 1846
HincII GTYRAC 2 cut(s) 587, 1687
HindII GTYRAC 2 cut(s) 587, 1687
HindIII AAGCTT 2 cut(s) 11, 167
HinfI GANTC 4 cut(s) 327, 574, 1157, 1427
HpaII CCGG 4 cut(s) 363, 1207, 1219, 1356
HphI GGTGA 6 cut(s) 412, 875, 877, 1208, 1295, 1654
Hpy166II GTNNAC 4 cut(s) 130, 306, 587, 1687
Hpy188I TCNGA 9 cut(s) 247, 301, 348, 903, 1014, 1370, 1403, 1426, 1507
Hpy188III TCNNGA 7 cut(s) 163, 238, 457, 565, 818, 1161, 1843
Hpy8I GTNNAC 4 cut(s) 130, 306, 587, 1687
Hpy99I CGWCG 3 cut(s) 352, 1347, 1652
HpyAV CCTTC 9 cut(s) 223, 244, 271, 277, 1168, 1590, 1606, 1776, 1846
HpyCH4III ACNGT 2 cut(s) 158, 1886
HpyCH4V TGCA 8 cut(s) 517, 665, 860, 974, 1136, 1248, 1500, 1601
HpyF10VI GCNNNNNNNGC 2 cut(s) 536, 656
HpyF3I CTNAG 7 cut(s) 122, 244, 572, 1011, 1367, 1713, 1820
Hsp92II CATG 9 cut(s) 212, 326, 431, 494, 733, 880, 1157, 1300, 1846
KpnI GGTACC 2 cut(s) 56, 624
KroI GCCGGC 1 cut(s) 1206
KroNI GCCGGC 1 cut(s) 1208
Kzo9I GATC 3 cut(s) 144, 453, 1816
LmnI GCTCC 8 cut(s) 365, 442, 538, 655, 792, 994, 1066, 1855
Lsp1109I GCAGC 2 cut(s) 517, 1532
LweI GCATC 3 cut(s) 1290, 1365, 1610
MaeI CTAG 4 cut(s) 32, 852, 998, 1894
MaeIII GTNAC 6 cut(s) 229, 473, 640, 1214, 1633, 1660
MalI GATC 3 cut(s) 146, 455, 1818
MboI GATC 3 cut(s) 144, 453, 1816
MboII GAAGA 8 cut(s) 741, 973, 998, 1153, 1265, 1276, 1404, 1699
MfeI CAATTG 2 cut(s) 654, 1263
MflI RGATCY 1 cut(s) 1816
MhlI GDGCHC 1 cut(s) 370
MlsI TGGCCA 2 cut(s) 105, 810
MluNI TGGCCA 2 cut(s) 105, 810
MlyI GAGTC 1 cut(s) 583
MmeI TCCRAC 3 cut(s) 371, 429, 770
Mox20I TGGCCA 2 cut(s) 105, 810
Mph1103I ATGCAT 1 cut(s) 1502
MroNI GCCGGC 1 cut(s) 1206
MroXI GAANNNNTTC 1 cut(s) 1272
MscI TGGCCA 2 cut(s) 105, 810
MseI TTAA 5 cut(s) 117, 1020, 1056, 1383, 1643
MslI CAYNNNNRTG 1 cut(s) 1841
Msp20I TGGCCA 2 cut(s) 105, 810
MspA1I CMGCKG 3 cut(s) 318, 539, 1234
MspI CCGG 4 cut(s) 363, 1207, 1219, 1356
MspR9I CCNGG 3 cut(s) 363, 386, 1655
MunI CAATTG 2 cut(s) 654, 1263
MvaI CCWGG 2 cut(s) 386, 1655
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 2 cut(s) 536, 656
NaeI GCCGGC 1 cut(s) 1208
NciI CCSGG 1 cut(s) 363
NcoI CCATGG 1 cut(s) 322
NdeI CATATG 1 cut(s) 700
NdeII GATC 3 cut(s) 144, 453, 1816
NgoMIV GCCGGC 1 cut(s) 1206
NlaIII CATG 9 cut(s) 212, 326, 431, 494, 733, 880, 1157, 1300, 1846
NlaIV GGNNCC 5 cut(s) 54, 356, 622, 651, 1521
NmuCI GTSAC 4 cut(s) 473, 1214, 1633, 1660
NsiI ATGCAT 1 cut(s) 1502
PagI TCATGA 1 cut(s) 1842
PaqCI CACCTGC 1 cut(s) 851
PcsI WCGNNNNNNNCGW 1 cut(s) 1656
PdiI GCCGGC 1 cut(s) 1208
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 3 cut(s) 327, 1157, 1427
PflMI CCANNNNNTGG 1 cut(s) 385
PkrI GCNGC 5 cut(s) 320, 532, 1280, 1361, 1547
PleI GAGTC 1 cut(s) 582
PpsI GAGTC 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 370
Psp6I CCWGG 2 cut(s) 384, 1653
PspGI CCWGG 2 cut(s) 384, 1653
PspN4I GGNNCC 5 cut(s) 54, 356, 622, 651, 1521
PspPI GGNCC 6 cut(s) 355, 388, 758, 873, 1007, 1755
PstNI CAGNNNCTG 1 cut(s) 385
PsuI RGATCY 1 cut(s) 1816
PvuII CAGCTG 2 cut(s) 539, 1234
RsaI GTAC 8 cut(s) 54, 305, 383, 560, 622, 1025, 1230, 1888
RsaNI GTAC 8 cut(s) 53, 304, 382, 559, 621, 1024, 1229, 1887
RseI CAYNNNNRTG 1 cut(s) 1841
SacI GAGCTC 1 cut(s) 370
SalI GTCGAC 1 cut(s) 585
SaqAI TTAA 5 cut(s) 117, 1020, 1056, 1383, 1643
SatI GCNGC 5 cut(s) 319, 531, 1279, 1360, 1546
Sau3AI GATC 3 cut(s) 144, 453, 1816
Sau96I GGNCC 6 cut(s) 355, 388, 758, 873, 1007, 1755
SchI GAGTC 1 cut(s) 583
ScrFI CCNGG 3 cut(s) 363, 386, 1655
SduI GDGCHC 1 cut(s) 370
SfaNI GCATC 3 cut(s) 1290, 1365, 1610
SinI GGWCC 4 cut(s) 758, 873, 1007, 1755
SmiMI CAYNNNNRTG 1 cut(s) 1841
SmlI CTYRAG 1 cut(s) 816
SmoI CTYRAG 1 cut(s) 816
SpeI ACTAGT 1 cut(s) 31
SsiI CCGC 7 cut(s) 258, 318, 464, 1279, 1306, 1360, 1628
SspMI CTAG 4 cut(s) 32, 852, 998, 1894
SstI GAGCTC 1 cut(s) 370
StyD4I CCNGG 3 cut(s) 361, 384, 1653
StyI CCWWGG 3 cut(s) 322, 1513, 1523
TaaI ACNGT 2 cut(s) 158, 1886
TaqI TCGA 2 cut(s) 525, 586
TatI WGTACW 3 cut(s) 303, 1023, 1228
TauI GCSGC 3 cut(s) 321, 1281, 1362
TfiI GAWTC 3 cut(s) 327, 1157, 1427
Tru1I TTAA 5 cut(s) 117, 1020, 1056, 1383, 1643
Tru9I TTAA 5 cut(s) 117, 1020, 1056, 1383, 1643
TscAI CASTG 6 cut(s) 130, 478, 1143, 1329, 1717, 1757
TseFI GTSAC 4 cut(s) 473, 1214, 1633, 1660
TseI GCWGC 2 cut(s) 530, 1545
Tsp45I GTSAC 4 cut(s) 473, 1214, 1633, 1660
TspDTI ATGAA 6 cut(s) 70, 818, 1170, 1187, 1285, 1831
TspGWI ACGGA 2 cut(s) 750, 898
TspRI CASTG 6 cut(s) 130, 478, 1143, 1329, 1717, 1757
Van91I CCANNNNNTGG 1 cut(s) 385
VpaK11BI GGWCC 4 cut(s) 758, 873, 1007, 1755
XapI RAATTY 5 cut(s) 415, 467, 1178, 1327, 1760
XcmI CCANNNNNNNNNTGG 1 cut(s) 1796
XmiI GTMKAC 2 cut(s) 129, 586
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 4 cut(s) 32, 852, 998, 1894
Zsp2I ATGCAT 1 cut(s) 1502
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.