Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009386.1

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Reverse (-)

39018 .. 41589

Gene Structure 2572 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009386.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

atgtttgtcaagctttctgctctcctagtactactagtacttctggcacccgcagaagcccaagacctcaatttcatctacaatgatggtttctctagcagttctggtcttaatctaagtctagacggcatagcagagatcacaccaaaaggtctcttgaagcttacgaaccacaccaaagagagaactgacagacgtggtcgtgccgtctaccctaacccggtaaccttcaaaaactcagaaaacgactccgctttctccttctccacctcctttatctttgccatccaatcagagtacactactgtcagcggccatggaatagcctttttcatcgctccgaccacaggcctccccggaggtacgtcgagccagtacctgaacctgttcaacgtctccaacaatgggaatttcaccaatcatgtttttgctgtggagcttgacacgatccagaacgcggaattcagtgacatcaatgataaccatgttgggatagacatcaatggcttgcagtctgtccaagctgctccagctggttattatgatggtcggtacttcaagaacctgagtcttatcagtcgacaagaaatgagagtttgggttgaatatgatggtaccaacaagcaaattgaagttactatggctccaattgctgttgcaactaaacccctaactccacttttgtctttgacatatgacctttccccaattctcaacagaaccatgtacaaaaccatgtatgttggcttttcctcttcaaatggtccgttcctcacctcccattctgtagtgggttggagctttaggatgaatggccaagctcaagaccttatagcttccaaacttcccaagttgcctagcattgcaggtaataagaggtccaggcttttcacctttggtgtgcctctgatttcagtgagtttggttttgctagtggtttctggggtgctttatgtcataagtaggaagaggaagtatgcagaagtgattgaagattgggagctagagtatggtcctcagaggtttaagtacaaagaattgtatatagccaccaaagggtttagggaaaaggagcttttgggaactgggggatttggtaaagtttatagaggtttattcccctcctctaaaattgagattgcagtgaagagggtgtcacatgaatcaacacaggggacgagggaatttgtagcagaaattgttagtattggccggcttcgtcaccggaatttagtacaactgttgggatattgcaggcgaaaaggggagctgcttttggtctatgactacatgcctaatggaagcttggacaaatacctctttgatcaacctgaggtgacccttaattggagccagaggtttaaagtcatcaaaggtgtggcttcagggctgttctatcttcatgaagaatgggaacaggttgtgattcatagagatgtgaaggccagtaatgtgttgctagatggggaattgaatggaaggctaggggatttcgggcttgcaagattatacgaccatggaacagaccctcaaactactcagctagttggaacactcgggtacctagctccagagtacacaagaacaggtcgggccaccacgaggacggacgtgtttgcttttggggcatttttgctcgaagttgcttgcggaaaaagaccaattaagacacagggtccagaagatgtgattttggttgcttgggtgttttcttgttggaatagaggtaacatcctagaggcaagagatcaaagccttggtactgattttgtggccgaggaagtggagttggtgttgaatcttgggcttttgtgctatcatttggacccagcggcaaggccaagcatgcgacaagtcgttcagtacttggccggtgatgttgctttgccggaagtgtcacttctcgggttttcttcgaatggattaacgattggacaccgtgaaggttttgatgactatgctaagtcgtatcagtcttcttttggcaataagttctcccattcatcatatgttccagagtcggcactactttcaggtggtcgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

681

Amino Acids

75.61

Weight (kDa)

7.22

Isoelectric Point (pI)

36.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	857
Acc65I	GGTACC	2 cut(s)	614, 1560
AccB1I	GGYRCC	3 cut(s)	46, 614, 1560
AccI	GTMKAC	2 cut(s)	210, 580
AccII	CGCG	1 cut(s)	458
AciI	CCGC	6 cut(s)	51, 252, 312, 458, 1650, 1832
AclWI	GGATC	1 cut(s)	442
AcoI	YGGCCR	5 cut(s)	313, 814, 1210, 1773, 1869
AcsI	RAATTY	4 cut(s)	409, 461, 1184, 1228
AcuI	CTGAAG	1 cut(s)	1368
AfiI	CCNNNNNNNGG	7 cut(s)	220, 347, 405, 457, 1056, 1347, 1602
AflIII	ACRYGT	1 cut(s)	1611
AhdI	GACNNNNNGTC	1 cut(s)	1674
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	2 cut(s)	197, 1612
AjnI	CCWGG	1 cut(s)	881
Alw26I	GTCTC	2 cut(s)	158, 400
AlwI	GGATC	1 cut(s)	442
AlwNI	CAGNNNCTG	1 cut(s)	379
Ama87I	CYCGRG	2 cut(s)	1556, 1904
AoxI	GGCC	9 cut(s)	313, 349, 814, 1210, 1443, 1593, 1773, 1838, 1869
ApeKI	GCWGC	2 cut(s)	524, 1270
ApoI	RAATTY	4 cut(s)	409, 461, 1184, 1228
Asp700I	GAANNNNTTC	1 cut(s)	386
Asp718I	GGTACC	2 cut(s)	614, 1560
AspS9I	GGNCC	6 cut(s)	764, 879, 1013, 1593, 1676, 1825
AsuC2I	CCSGG	2 cut(s)	221, 357
AsuHPI	GGTGA	6 cut(s)	406, 766, 883, 1214, 1348, 1886
AsuII	TTCGAA	1 cut(s)	1916
AvaI	CYCGRG	2 cut(s)	1556, 1904
AvaII	GGWCC	5 cut(s)	764, 879, 1013, 1676, 1825
AxyI	CCTNAGG	1 cut(s)	1332
BaeI	ACNNNNGTAYC	2 cut(s)	1544, 1577
BalI	TGGCCA	1 cut(s)	816
BanI	GGYRCC	3 cut(s)	46, 614, 1560
BauI	CACGAG	1 cut(s)	1600
BbsI	GAAGAC	1 cut(s)	1968
BbvI	GCAGC	2 cut(s)	511, 1257
BccI	CCATC	5 cut(s)	80, 293, 539, 605, 1457
BceAI	ACGGC	2 cut(s)	142, 191
BciT130I	CCWGG	1 cut(s)	883
BclI	TGATCA	1 cut(s)	1324
BcnI	CCSGG	2 cut(s)	221, 357
BcoDI	GTCTC	2 cut(s)	158, 400
BcuI	ACTAGT	1 cut(s)	34
BfmI	CTRYAG	1 cut(s)	786
BfuAI	ACCTGC	1 cut(s)	857
BisI	GCNGC	4 cut(s)	313, 525, 1271, 1833
BlsI	GCNGC	4 cut(s)	314, 526, 1272, 1834
BmcAI	AGTACT	3 cut(s)	30, 39, 1865
Bme1390I	CCNGG	3 cut(s)	221, 357, 883
Bme18I	GGWCC	5 cut(s)	764, 879, 1013, 1676, 1825
BmeRI	GACNNNNNGTC	1 cut(s)	1674
BmeT110I	CYCGRG	2 cut(s)	1556, 1904
BmgBI	CACGTC	2 cut(s)	197, 1612
BmgT120I	GGNCC	6 cut(s)	764, 879, 1013, 1593, 1676, 1825
BmiI	GGNNCC	7 cut(s)	48, 616, 645, 1352, 1562, 1677, 1827
BmrFI	CCNGG	3 cut(s)	221, 357, 883
BmrI	ACTGGG	1 cut(s)	1095
BmuI	ACTGGG	1 cut(s)	1095
BpiI	GAAGAC	1 cut(s)	1968
BpmI	CTGGAG	2 cut(s)	513, 1554
Bpu14I	TTCGAA	1 cut(s)	1916
BpuEI	CTTGAG	1 cut(s)	807
BpuMI	CCSGG	2 cut(s)	221, 357
BsaBI	GATNNNNATC	1 cut(s)	497
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	5 cut(s)	316, 355, 1516, 1756, 1776
BsaWI	WCCGGW	1 cut(s)	1224
BsaXI	ACNNNNNCTCC	6 cut(s)	628, 658, 992, 1022, 1778, 1808
Bsc4I	CCNNNNNNNGG	7 cut(s)	220, 347, 405, 457, 1056, 1347, 1602
Bse118I	RCCGGY	2 cut(s)	1212, 1871
Bse1I	ACTGG	3 cut(s)	373, 1090, 1446
Bse21I	CCTNAGG	1 cut(s)	1332
Bse3DI	GCAATG	1 cut(s)	861
Bse8I	GATNNNNATC	1 cut(s)	497
BseBI	CCWGG	1 cut(s)	883
BseDI	CCNNGG	5 cut(s)	316, 355, 1516, 1756, 1776
BseGI	GGATG	3 cut(s)	285, 813, 1731
BseJI	GATNNNNATC	1 cut(s)	497
BseLI	CCNNNNNNNGG	7 cut(s)	220, 347, 405, 457, 1056, 1347, 1602
BseMI	GCAATG	1 cut(s)	861
BseMII	CTCAG	5 cut(s)	252, 557, 1031, 1323, 1553
BseNI	ACTGG	3 cut(s)	373, 1090, 1446
BseRI	GAGGAG	1 cut(s)	1114
BseXI	GCAGC	2 cut(s)	511, 1257
BseYI	CCCAGC	1 cut(s)	1828
Bsh1236I	CGCG	1 cut(s)	458
BshFI	GGCC	9 cut(s)	315, 351, 816, 1212, 1445, 1595, 1775, 1840, 1871
BshNI	GGYRCC	3 cut(s)	46, 614, 1560
BsiHKCI	CYCGRG	2 cut(s)	1556, 1904
BsiSI	CCGG	6 cut(s)	221, 357, 1213, 1225, 1872, 1889
BslFI	GGGAC	1 cut(s)	1189
BslI	CCNNNNNNNGG	7 cut(s)	220, 347, 405, 457, 1056, 1347, 1602
BsmAI	GTCTC	2 cut(s)	158, 400
BsmBI	CGTCTC	1 cut(s)	400
BsmFI	GGGAC	1 cut(s)	1189
BsnI	GGCC	9 cut(s)	315, 351, 816, 1212, 1445, 1595, 1775, 1840, 1871
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	2 cut(s)	1556, 1904
Bsp119I	TTCGAA	1 cut(s)	1916
Bsp1407I	TGTACA	1 cut(s)	726
Bsp143I	GATC	4 cut(s)	138, 447, 1324, 1747
Bsp19I	CCATGG	2 cut(s)	316, 1516
BspACI	CCGC	6 cut(s)	51, 252, 312, 458, 1650, 1832
BspANI	GGCC	9 cut(s)	315, 351, 816, 1212, 1445, 1595, 1775, 1840, 1871
BspCNI	CTCAG	5 cut(s)	251, 558, 1030, 1324, 1552
BspFNI	CGCG	1 cut(s)	458
BspHI	TCATGA	1 cut(s)	1402
BspLI	GGNNCC	7 cut(s)	48, 616, 645, 1352, 1562, 1677, 1827
BspMI	ACCTGC	1 cut(s)	857
BspPI	GGATC	1 cut(s)	442
BspT104I	TTCGAA	1 cut(s)	1916
BspT107I	GGYRCC	3 cut(s)	46, 614, 1560
BspTNI	GGTCTC	1 cut(s)	158
BsrDI	GCAATG	1 cut(s)	861
BsrFI	RCCGGY	2 cut(s)	1212, 1871
BsrGI	TGTACA	1 cut(s)	726
BsrI	ACTGG	3 cut(s)	373, 1090, 1446
BssAI	RCCGGY	2 cut(s)	1212, 1871
BssECI	CCNNGG	5 cut(s)	316, 355, 1516, 1756, 1776
BssMI	GATC	4 cut(s)	138, 447, 1324, 1747
BssSI	CACGAG	1 cut(s)	1600
BssT1I	CCWWGG	3 cut(s)	316, 1516, 1756
Bst2BI	CACGAG	1 cut(s)	1600
Bst2UI	CCWGG	1 cut(s)	883
Bst4CI	ACNGT	3 cut(s)	307, 1242, 1940
Bst6I	CTCTTC	3 cut(s)	760, 962, 1142
BstAUI	TGTACA	1 cut(s)	726
BstBI	TTCGAA	1 cut(s)	1916
BstC8I	GCNNGC	6 cut(s)	509, 1214, 1256, 1500, 1648, 1847
BstDEI	CTNAG	7 cut(s)	116, 238, 566, 1017, 1332, 1539, 1962
BstDSI	CCRYGG	2 cut(s)	316, 1516
BstEII	GGTNACC	2 cut(s)	223, 1336
BstF5I	GGATG	3 cut(s)	285, 813, 1731
BstFNI	CGCG	1 cut(s)	458
BstKTI	GATC	4 cut(s)	141, 450, 1327, 1750
BstMAI	GTCTC	2 cut(s)	158, 400
BstMBI	GATC	4 cut(s)	138, 447, 1324, 1747
BstMWI	GCNNNNNNNGC	4 cut(s)	530, 650, 1625, 1846
BstNI	CCWGG	1 cut(s)	883
BstNSI	RCATGY	2 cut(s)	1294, 1849
BstPI	GGTNACC	2 cut(s)	223, 1336
BstSCI	CCNGG	3 cut(s)	219, 355, 881
BstSFI	CTRYAG	1 cut(s)	786
BstUI	CGCG	1 cut(s)	458
BstV1I	GCAGC	2 cut(s)	511, 1257
BstV2I	GAAGAC	1 cut(s)	1968
Bsu36I	CCTNAGG	1 cut(s)	1332
BsuRI	GGCC	9 cut(s)	315, 351, 816, 1212, 1445, 1595, 1775, 1840, 1871
BtgI	CCRYGG	2 cut(s)	316, 1516
BtgZI	GCGATG	1 cut(s)	319
BtrI	CACGTC	2 cut(s)	197, 1612
BtsCI	GGATG	3 cut(s)	285, 813, 1731
BtsI	GCAGTG	1 cut(s)	1149
BtsIMutI	CAGTG	3 cut(s)	472, 921, 1149
BveI	ACCTGC	1 cut(s)	857
Cac8I	GCNNGC	6 cut(s)	509, 1214, 1256, 1500, 1648, 1847
CaiI	CAGNNNCTG	1 cut(s)	379
CciI	TCATGA	1 cut(s)	1402
Cfr10I	RCCGGY	2 cut(s)	1212, 1871
Cfr13I	GGNCC	6 cut(s)	764, 879, 1013, 1593, 1676, 1825
DdeI	CTNAG	7 cut(s)	116, 238, 566, 1017, 1332, 1539, 1962
DpnI	GATC	4 cut(s)	140, 449, 1326, 1749
DpnII	GATC	4 cut(s)	138, 447, 1324, 1747
DraI	TTTAAA	1 cut(s)	1363
DriI	GACNNNNNGTC	1 cut(s)	1674
EaeI	YGGCCR	5 cut(s)	313, 814, 1210, 1773, 1869
Eam1104I	CTCTTC	3 cut(s)	760, 962, 1142
Eam1105I	GACNNNNNGTC	1 cut(s)	1674
EarI	CTCTTC	3 cut(s)	760, 962, 1142
Eco130I	CCWWGG	3 cut(s)	316, 1516, 1756
Eco147I	AGGCCT	1 cut(s)	351
Eco31I	GGTCTC	1 cut(s)	158
Eco47I	GGWCC	5 cut(s)	764, 879, 1013, 1676, 1825
Eco57I	CTGAAG	1 cut(s)	1368
Eco81I	CCTNAGG	1 cut(s)	1332
Eco88I	CYCGRG	2 cut(s)	1556, 1904
Eco91I	GGTNACC	2 cut(s)	223, 1336
EcoO65I	GGTNACC	2 cut(s)	223, 1336
EcoRI	GAATTC	1 cut(s)	461
EcoRII	CCWGG	1 cut(s)	881
EcoT14I	CCWWGG	3 cut(s)	316, 1516, 1756
ErhI	CCWWGG	3 cut(s)	316, 1516, 1756
Esp3I	CGTCTC	1 cut(s)	400
FalI	AAGNNNNNCTT	2 cut(s)	1884, 1916
FaqI	GGGAC	1 cut(s)	1189
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	2 cut(s)	694, 2008
FbaI	TGATCA	1 cut(s)	1324
FblI	GTMKAC	2 cut(s)	210, 580
Fnu4HI	GCNGC	4 cut(s)	313, 525, 1271, 1833
FokI	GGATG	3 cut(s)	272, 820, 1718
Fsp4HI	GCNGC	4 cut(s)	313, 525, 1271, 1833
GluI	GCNGC	4 cut(s)	313, 525, 1271, 1833
GsaI	CCCAGC	1 cut(s)	1832
GsuI	CTGGAG	2 cut(s)	513, 1554
HaeIII	GGCC	9 cut(s)	315, 351, 816, 1212, 1445, 1595, 1775, 1840, 1871
HapII	CCGG	6 cut(s)	221, 357, 1213, 1225, 1872, 1889
HincII	GTYRAC	1 cut(s)	581
HindII	GTYRAC	1 cut(s)	581
HindIII	AAGCTT	3 cut(s)	11, 161, 1303
HinfI	GANTC	6 cut(s)	248, 568, 1163, 1426, 1798, 2018
HpaII	CCGG	6 cut(s)	221, 357, 1213, 1225, 1872, 1889
HphI	GGTGA	6 cut(s)	406, 766, 883, 1214, 1348, 1886
Hpy166II	GTNNAC	4 cut(s)	211, 300, 581, 1578
Hpy188I	TCNGA	5 cut(s)	241, 295, 342, 909, 1020
Hpy188III	TCNNGA	9 cut(s)	122, 157, 451, 559, 824, 1403, 1571, 1679, 2015
Hpy8I	GTNNAC	4 cut(s)	211, 300, 581, 1578
Hpy99I	CGWCG	1 cut(s)	370
HpyAV	CCTTC	5 cut(s)	238, 271, 1435, 1473, 1937
HpyCH4III	ACNGT	3 cut(s)	307, 1242, 1940
HpyCH4IV	ACGT	4 cut(s)	196, 365, 393, 1611
HpyCH4V	TGCA	7 cut(s)	511, 659, 866, 980, 1142, 1254, 1502
HpyF10VI	GCNNNNNNNGC	4 cut(s)	530, 650, 1625, 1846
HpyF3I	CTNAG	7 cut(s)	116, 238, 566, 1017, 1332, 1539, 1962
HpySE526I	ACGT	4 cut(s)	196, 365, 393, 1611
KpnI	GGTACC	2 cut(s)	618, 1564
KroI	GCCGGC	1 cut(s)	1212
KroNI	GCCGGC	1 cut(s)	1214
Ksp22I	TGATCA	1 cut(s)	1324
Kzo9I	GATC	4 cut(s)	138, 447, 1324, 1747
Lsp1109I	GCAGC	2 cut(s)	511, 1257
MaeII	ACGT	4 cut(s)	196, 365, 393, 1611
MaeIII	GTNAC	8 cut(s)	223, 467, 634, 1155, 1220, 1336, 1727, 1896
MalI	GATC	4 cut(s)	140, 449, 1326, 1749
MboI	GATC	4 cut(s)	138, 447, 1324, 1747
MboII	GAAGA	9 cut(s)	747, 979, 1004, 1159, 1391, 1418, 1694, 1905, 1968
MfeI	CAATTG	1 cut(s)	648
MlsI	TGGCCA	1 cut(s)	816
MluNI	TGGCCA	1 cut(s)	816
MlyI	GAGTC	3 cut(s)	242, 577, 2027
MmeI	TCCRAC	5 cut(s)	365, 423, 776, 1528, 1697
Mox20I	TGGCCA	1 cut(s)	816
MroNI	GCCGGC	1 cut(s)	1212
MroXI	GAANNNNTTC	1 cut(s)	386
MscI	TGGCCA	1 cut(s)	816
MseI	TTAA	6 cut(s)	111, 1026, 1344, 1362, 1665, 1925
MslI	CAYNNNNRTG	1 cut(s)	1434
Msp20I	TGGCCA	1 cut(s)	816
MspA1I	CMGCKG	3 cut(s)	312, 533, 1832
MspI	CCGG	6 cut(s)	221, 357, 1213, 1225, 1872, 1889
MspR9I	CCNGG	3 cut(s)	221, 357, 883
MunI	CAATTG	1 cut(s)	648
MvaI	CCWGG	1 cut(s)	883
MvnI	CGCG	1 cut(s)	458
MwoI	GCNNNNNNNGC	4 cut(s)	530, 650, 1625, 1846
NaeI	GCCGGC	1 cut(s)	1214
NciI	CCSGG	2 cut(s)	221, 357
NcoI	CCATGG	2 cut(s)	316, 1516
NdeI	CATATG	2 cut(s)	694, 2008
NdeII	GATC	4 cut(s)	138, 447, 1324, 1747
NgoMIV	GCCGGC	1 cut(s)	1212
NlaIV	GGNNCC	7 cut(s)	48, 616, 645, 1352, 1562, 1677, 1827
NmeAIII	GCCGAG	1 cut(s)	1801
NmuCI	GTSAC	5 cut(s)	467, 1155, 1220, 1336, 1896
NspI	RCATGY	2 cut(s)	1294, 1849
NspV	TTCGAA	1 cut(s)	1916
PaeI	GCATGC	1 cut(s)	1849
PagI	TCATGA	1 cut(s)	1402
PceI	AGGCCT	1 cut(s)	351
PdiI	GCCGGC	1 cut(s)	1214
PdmI	GAANNNNTTC	1 cut(s)	386
PfeI	GAWTC	3 cut(s)	1163, 1426, 1798
PflFI	GACNNNGTC	1 cut(s)	198
PkrI	GCNGC	4 cut(s)	314, 526, 1272, 1834
PleI	GAGTC	3 cut(s)	242, 576, 2026
PpsI	GAGTC	3 cut(s)	242, 576, 2026
Psp6I	CCWGG	1 cut(s)	881
PspEI	GGTNACC	2 cut(s)	223, 1336
PspFI	CCCAGC	1 cut(s)	1828
PspGI	CCWGG	1 cut(s)	881
PspN4I	GGNNCC	7 cut(s)	48, 616, 645, 1352, 1562, 1677, 1827
PspPI	GGNCC	6 cut(s)	764, 879, 1013, 1593, 1676, 1825
PstNI	CAGNNNCTG	1 cut(s)	379
PsyI	GACNNNGTC	1 cut(s)	198
PvuII	CAGCTG	1 cut(s)	533
RseI	CAYNNNNRTG	1 cut(s)	1434
SalI	GTCGAC	1 cut(s)	579
SaqAI	TTAA	6 cut(s)	111, 1026, 1344, 1362, 1665, 1925
SatI	GCNGC	4 cut(s)	313, 525, 1271, 1833
Sau3AI	GATC	4 cut(s)	138, 447, 1324, 1747
Sau96I	GGNCC	6 cut(s)	764, 879, 1013, 1593, 1676, 1825
ScaI	AGTACT	3 cut(s)	30, 39, 1865
SchI	GAGTC	3 cut(s)	242, 577, 2027
ScrFI	CCNGG	3 cut(s)	221, 357, 883
SfcI	CTRYAG	1 cut(s)	786
SfuI	TTCGAA	1 cut(s)	1916
SinI	GGWCC	5 cut(s)	764, 879, 1013, 1676, 1825
SmiMI	CAYNNNNRTG	1 cut(s)	1434
SmlI	CTYRAG	1 cut(s)	822
SmoI	CTYRAG	1 cut(s)	822
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1849
SseBI	AGGCCT	1 cut(s)	351
SsiI	CCGC	6 cut(s)	51, 252, 312, 458, 1650, 1832
StuI	AGGCCT	1 cut(s)	351
StyD4I	CCNGG	3 cut(s)	219, 355, 881
StyI	CCWWGG	3 cut(s)	316, 1516, 1756
TaaI	ACNGT	3 cut(s)	307, 1242, 1940
TaiI	ACGT	4 cut(s)	199, 368, 396, 1614
TaqI	TCGA	4 cut(s)	368, 580, 1638, 1916
TatI	WGTACW	8 cut(s)	28, 37, 297, 726, 1029, 1234, 1575, 1863
TauI	GCSGC	2 cut(s)	315, 1835
TfiI	GAWTC	3 cut(s)	1163, 1426, 1798
Tru1I	TTAA	6 cut(s)	111, 1026, 1344, 1362, 1665, 1925
Tru9I	TTAA	6 cut(s)	111, 1026, 1344, 1362, 1665, 1925
TscAI	CASTG	3 cut(s)	472, 921, 1149
TseFI	GTSAC	5 cut(s)	467, 1155, 1220, 1336, 1896
TseI	GCWGC	2 cut(s)	524, 1270
Tsp45I	GTSAC	5 cut(s)	467, 1155, 1220, 1336, 1896
TspDTI	ATGAA	8 cut(s)	64, 322, 824, 1176, 1391, 1418, 1419, 1992
TspGWI	ACGGA	2 cut(s)	756, 1622
TspRI	CASTG	3 cut(s)	472, 921, 1149
Tth111I	GACNNNGTC	1 cut(s)	198
VpaK11BI	GGWCC	5 cut(s)	764, 879, 1013, 1676, 1825
XapI	RAATTY	4 cut(s)	409, 461, 1184, 1228
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	2 cut(s)	1294, 1849
XmiI	GTMKAC	2 cut(s)	210, 580
XmnI	GAANNNNTTC	1 cut(s)	386
ZrmI	AGTACT	3 cut(s)	30, 39, 1865

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.