Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003492.1

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Reverse (-)

50029 .. 52439

Gene Structure 2411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003492.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

atgtttgtcaagctttctgctctcctagtaccactagtacttctggcacacgcagaagcccaagacctcaatttcatctacaatgatggtttctctggccgttctggtcttaatctcagtctagacggcatagcagagatcacaccagaaggtctcttgaagcttacaaaccacaccaaacagagaggtggtcatgccttctaccctaacccagtaaccttcaagaactcagagaacgactccgctttctccttctccaccaactttatctttgccatccaaccagagtacactacttccagcggcgatggaatggcctttgtcatcgctccgacgagaggcctccccggaggtctgtcgaaccagtacctgagcctgttcaacccctccaacaatgggaagttcaccaatcatatttttgctgtggagcttgacacgatccagacgctggaattcggtgacatcaatgacaaccatgttgggatcgacatcaatggcttgagctctgtcacagctgctccagctggttattttgatggtcagttcaaggacctgactcttattagtggtaaagaaatgagagtttgggttgaatataatggtaccaagaagcaaattgaagtcactatggctccaattggtgttgcaactaaacccgcaactccacttttgtctttgaaatatgacctttccccaattctcaacaaaaccatgtatgttggcttttcctcttcaaatggtccgttcctcacctcccattctgtagtgggttggagctttaggatgaatggtcaagctcaagaccttatagcttccaaacttcccaagttgcctagcattgcaggtaaaaagaggtccaagtttttcacctttggtgtgcctctgatttcagtgagtttggttttgctagtggtttctggggtgcttcatgtcataagaaggaagaggaagtttgcagaagtgcttgaagattgggagctagagtatggtcctcagaggtttaagtacaaagagctgtatatagccaccaaagggtttagggaaaaggagcttttgggaactgggggatttggtaaagtttatagaggtttattaccctcctctgaagttgagattgcagtgaagaaggtatcacttgaatcaagacaggggatgaaggaatttgtagcagaaattgttagtattggccggcttcgtcaccggaatttagtacaactgtcgggatattgcaggcgaaaagaggagctgcttttggtctatgactacatgccaaacggaagcttggacaaatacctctttgatcaacctgaggtgacccttaattggagccagaggtttaaagtcatcaaaggtgtggcttcagggctgctctatcttcatgaagaatgggaacaggttgtgattcatagagatgtgaaggcaagtaatgtgttgttagatggggaattcaatggaaggctaggagattttgggcttgcaagattatacgaccatggaacagaccctcaaactactcatatagttggaacactcgggtacctagccccagagcacacaagaacaggtcgggccaccacgagcaccgacgtgtttgctttcggggcatttttgctcgaagttgcttgcggaaaaaggccaattaagacacagggtccagaacatgtgattttggttgattgggtgttttcttgttggaataggagtaacatccttgaggcaagagatcagagctttggtacggattttgtagccgaggaagtggagttggtgttgaaacttgggcttttatgctctcattcggagccagcggcaagaccaagcatgcgacaagtcgttcagtacttggccaatgatgttgctttgccgaaagtgtcacttcttgggccttcttctagtggcttaacggttggacaccgtgaaggttttgatgactatgctatgtcgtatcagtcttccttaggcaaggggtcctcccattcatcatatgtcacagagtcgtcacaactttcaggtggtcgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

673

Amino Acids

74.25

Weight (kDa)

7.29

Isoelectric Point (pI)

35.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	833
Acc65I	GGTACC	2 cut(s)	602, 1536
AccB1I	GGYRCC	2 cut(s)	602, 1536
AccB7I	CCANNNNNTGG	1 cut(s)	448
AciI	CCGC	5 cut(s)	243, 303, 657, 1626, 1808
AclWI	GGATC	2 cut(s)	433, 491
AcoI	YGGCCR	3 cut(s)	97, 1186, 1845
AcsI	RAATTY	4 cut(s)	452, 1160, 1204, 1445
AcuI	CTGAAG	2 cut(s)	1125, 1344
AfiI	CCNNNNNNNGG	5 cut(s)	338, 396, 448, 1032, 1323
AflIII	ACRYGT	2 cut(s)	1587, 1660
AhdI	GACNNNNNGTC	1 cut(s)	1650
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	1588
AleI	CACNNNNGTG	1 cut(s)	1586
Alw21I	GWGCWC	3 cut(s)	506, 1554, 1583
Alw26I	GTCTC	1 cut(s)	158
AlwI	GGATC	2 cut(s)	433, 491
AlwNI	CAGNNNCTG	2 cut(s)	370, 448
Ama87I	CYCGRG	1 cut(s)	1532
AoxI	GGCC	8 cut(s)	97, 315, 340, 1186, 1569, 1634, 1845, 1883
ApeKI	GCWGC	3 cut(s)	515, 1246, 1366
ApoI	RAATTY	4 cut(s)	452, 1160, 1204, 1445
Asp718I	GGTACC	2 cut(s)	602, 1536
AspS9I	GGNCC	8 cut(s)	550, 740, 855, 989, 1569, 1652, 1883, 1968
AsuC2I	CCSGG	1 cut(s)	348
AsuHPI	GGTGA	6 cut(s)	397, 470, 742, 859, 1190, 1324
AvaI	CYCGRG	1 cut(s)	1532
AvaII	GGWCC	6 cut(s)	550, 740, 855, 989, 1652, 1968
AxyI	CCTNAGG	2 cut(s)	1308, 1957
BaeI	ACNNNNGTAYC	2 cut(s)	1520, 1553
BalI	TGGCCA	1 cut(s)	1847
BanI	GGYRCC	2 cut(s)	602, 1536
BanII	GRGCYC	1 cut(s)	506
BauI	CACGAG	1 cut(s)	1576
BbsI	GAAGAC	1 cut(s)	1944
Bbv12I	GWGCWC	3 cut(s)	506, 1554, 1583
BbvI	GCAGC	3 cut(s)	502, 1233, 1353
BccI	CCATC	5 cut(s)	80, 284, 302, 530, 1433
BceAI	ACGGC	2 cut(s)	84, 142
BcgI	CGANNNNNNTGC	2 cut(s)	1574, 1608
BclI	TGATCA	1 cut(s)	1300
BcnI	CCSGG	1 cut(s)	348
BcoDI	GTCTC	1 cut(s)	158
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	9 cut(s)	26, 35, 122, 834, 908, 980, 1460, 1541, 1893
BfmI	CTRYAG	1 cut(s)	762
BfuAI	ACCTGC	1 cut(s)	833
BisI	GCNGC	5 cut(s)	304, 516, 1247, 1367, 1809
BlsI	GCNGC	5 cut(s)	305, 517, 1248, 1368, 1810
BmcAI	AGTACT	2 cut(s)	39, 1841
Bme1390I	CCNGG	1 cut(s)	348
Bme18I	GGWCC	6 cut(s)	550, 740, 855, 989, 1652, 1968
BmeRI	GACNNNNNGTC	1 cut(s)	1650
BmeT110I	CYCGRG	1 cut(s)	1532
BmgBI	CACGTC	1 cut(s)	1588
BmgT120I	GGNCC	8 cut(s)	550, 740, 855, 989, 1569, 1652, 1883, 1968
BmiI	GGNNCC	7 cut(s)	604, 633, 1328, 1538, 1653, 1803, 1969
BmrFI	CCNGG	1 cut(s)	348
BmrI	ACTGGG	2 cut(s)	206, 1071
BmuI	ACTGGG	2 cut(s)	206, 1071
BpiI	GAAGAC	1 cut(s)	1944
BplI	GAGNNNNNCTC	2 cut(s)	224, 256
BpmI	CTGGAG	1 cut(s)	504
Bpu10I	CCTNAGC	1 cut(s)	371
BpuEI	CTTGAG	3 cut(s)	520, 783, 1733
BpuMI	CCSGG	1 cut(s)	348
BsaBI	GATNNNNATC	1 cut(s)	488
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	3 cut(s)	346, 1492, 1752
BsaWI	WCCGGW	1 cut(s)	1200
BsaXI	ACNNNNNCTCC	8 cut(s)	502, 532, 616, 646, 968, 998, 1754, 1784
Bsc4I	CCNNNNNNNGG	5 cut(s)	338, 396, 448, 1032, 1323
Bse118I	RCCGGY	1 cut(s)	1188
Bse1I	ACTGG	3 cut(s)	212, 364, 1066
Bse21I	CCTNAGG	2 cut(s)	1308, 1957
Bse3DI	GCAATG	1 cut(s)	837
Bse8I	GATNNNNATC	1 cut(s)	488
BseDI	CCNNGG	3 cut(s)	346, 1492, 1752
BseGI	GGATG	4 cut(s)	276, 789, 1158, 1707
BseJI	GATNNNNATC	1 cut(s)	488
BseLI	CCNNNNNNNGG	5 cut(s)	338, 396, 448, 1032, 1323
BseMI	GCAATG	1 cut(s)	837
BseMII	CTCAG	5 cut(s)	130, 243, 362, 1007, 1299
BseNI	ACTGG	3 cut(s)	212, 364, 1066
BseRI	GAGGAG	2 cut(s)	1090, 1256
BseXI	GCAGC	3 cut(s)	502, 1233, 1353
BshFI	GGCC	8 cut(s)	99, 317, 342, 1188, 1571, 1636, 1847, 1885
BshNI	GGYRCC	2 cut(s)	602, 1536
BsiHKAI	GWGCWC	3 cut(s)	506, 1554, 1583
BsiHKCI	CYCGRG	1 cut(s)	1532
BsiSI	CCGG	3 cut(s)	348, 1189, 1201
BslI	CCNNNNNNNGG	5 cut(s)	338, 396, 448, 1032, 1323
BsmAI	GTCTC	1 cut(s)	158
BsnI	GGCC	8 cut(s)	99, 317, 342, 1188, 1571, 1636, 1847, 1885
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	1 cut(s)	1532
Bsp1286I	GDGCHC	3 cut(s)	506, 1554, 1583
Bsp143I	GATC	5 cut(s)	138, 438, 483, 1300, 1723
Bsp19I	CCATGG	1 cut(s)	1492
BspACI	CCGC	5 cut(s)	243, 303, 657, 1626, 1808
BspANI	GGCC	8 cut(s)	99, 317, 342, 1188, 1571, 1636, 1847, 1885
BspCNI	CTCAG	5 cut(s)	129, 242, 363, 1006, 1300
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	7 cut(s)	604, 633, 1328, 1538, 1653, 1803, 1969
BspMI	ACCTGC	1 cut(s)	833
BspPI	GGATC	2 cut(s)	433, 491
BspT107I	GGYRCC	2 cut(s)	602, 1536
BspTNI	GGTCTC	1 cut(s)	158
BsrDI	GCAATG	1 cut(s)	837
BsrFI	RCCGGY	1 cut(s)	1188
BsrI	ACTGG	3 cut(s)	212, 364, 1066
BssAI	RCCGGY	1 cut(s)	1188
BssECI	CCNNGG	3 cut(s)	346, 1492, 1752
BssMI	GATC	5 cut(s)	138, 438, 483, 1300, 1723
BssSI	CACGAG	1 cut(s)	1576
BssT1I	CCWWGG	1 cut(s)	1492
Bst2BI	CACGAG	1 cut(s)	1576
Bst4CI	ACNGT	3 cut(s)	1218, 1906, 1916
Bst6I	CTCTTC	2 cut(s)	736, 938
BstC8I	GCNNGC	6 cut(s)	1190, 1232, 1476, 1624, 1806, 1823
BstDEI	CTNAG	6 cut(s)	116, 229, 371, 993, 1308, 1957
BstDSI	CCRYGG	1 cut(s)	1492
BstEII	GGTNACC	1 cut(s)	1312
BstF5I	GGATG	4 cut(s)	276, 789, 1158, 1707
BstKTI	GATC	5 cut(s)	141, 441, 486, 1303, 1726
BstMAI	GTCTC	1 cut(s)	158
BstMBI	GATC	5 cut(s)	138, 438, 483, 1300, 1723
BstMWI	GCNNNNNNNGC	2 cut(s)	521, 1601
BstNSI	RCATGY	3 cut(s)	1270, 1664, 1825
BstPI	GGTNACC	1 cut(s)	1312
BstSCI	CCNGG	1 cut(s)	346
BstSFI	CTRYAG	1 cut(s)	762
BstV1I	GCAGC	3 cut(s)	502, 1233, 1353
BstV2I	GAAGAC	1 cut(s)	1944
Bsu36I	CCTNAGG	2 cut(s)	1308, 1957
BsuRI	GGCC	8 cut(s)	99, 317, 342, 1188, 1571, 1636, 1847, 1885
BtgI	CCRYGG	1 cut(s)	1492
BtgZI	GCGATG	2 cut(s)	310, 321
BtrI	CACGTC	1 cut(s)	1588
BtsCI	GGATG	4 cut(s)	276, 789, 1158, 1707
BtsI	GCAGTG	1 cut(s)	1125
BtsIMutI	CAGTG	2 cut(s)	897, 1125
BveI	ACCTGC	1 cut(s)	833
Cac8I	GCNNGC	6 cut(s)	1190, 1232, 1476, 1624, 1806, 1823
CaiI	CAGNNNCTG	2 cut(s)	370, 448
CciI	TCATGA	1 cut(s)	1378
Cfr10I	RCCGGY	1 cut(s)	1188
Cfr13I	GGNCC	8 cut(s)	550, 740, 855, 989, 1569, 1652, 1883, 1968
CseI	GACGC	1 cut(s)	454
CviAII	CATG	9 cut(s)	194, 476, 712, 929, 1267, 1379, 1493, 1661, 1822
DdeI	CTNAG	6 cut(s)	116, 229, 371, 993, 1308, 1957
DpnI	GATC	5 cut(s)	140, 440, 485, 1302, 1725
DpnII	GATC	5 cut(s)	138, 438, 483, 1300, 1723
DraI	TTTAAA	1 cut(s)	1339
DriI	GACNNNNNGTC	1 cut(s)	1650
EaeI	YGGCCR	3 cut(s)	97, 1186, 1845
Eam1104I	CTCTTC	2 cut(s)	736, 938
Eam1105I	GACNNNNNGTC	1 cut(s)	1650
EarI	CTCTTC	2 cut(s)	736, 938
Ecl136II	GAGCTC	1 cut(s)	504
Eco130I	CCWWGG	1 cut(s)	1492
Eco147I	AGGCCT	1 cut(s)	342
Eco24I	GRGCYC	1 cut(s)	506
Eco31I	GGTCTC	1 cut(s)	158
Eco47I	GGWCC	6 cut(s)	550, 740, 855, 989, 1652, 1968
Eco53kI	GAGCTC	1 cut(s)	504
Eco57I	CTGAAG	2 cut(s)	1125, 1344
Eco81I	CCTNAGG	2 cut(s)	1308, 1957
Eco88I	CYCGRG	1 cut(s)	1532
Eco91I	GGTNACC	1 cut(s)	1312
EcoICRI	GAGCTC	1 cut(s)	504
EcoO109I	RGGNCCY	2 cut(s)	550, 1968
EcoO65I	GGTNACC	1 cut(s)	1312
EcoRI	GAATTC	2 cut(s)	452, 1445
EcoT14I	CCWWGG	1 cut(s)	1492
EcoT38I	GRGCYC	1 cut(s)	506
ErhI	CCWWGG	1 cut(s)	1492
FaeI	CATG	9 cut(s)	197, 479, 715, 932, 1270, 1382, 1496, 1664, 1825
FalI	AAGNNNNNCTT	2 cut(s)	1860, 1892
FatI	CATG	9 cut(s)	193, 475, 711, 928, 1266, 1378, 1492, 1660, 1821
FauI	CCCGC	1 cut(s)	664
FauNDI	CATATG	1 cut(s)	1984
FbaI	TGATCA	1 cut(s)	1300
Fnu4HI	GCNGC	5 cut(s)	304, 516, 1247, 1367, 1809
FokI	GGATG	4 cut(s)	263, 796, 1165, 1694
FriOI	GRGCYC	1 cut(s)	506
Fsp4HI	GCNGC	5 cut(s)	304, 516, 1247, 1367, 1809
FspBI	CTAG	9 cut(s)	26, 35, 122, 834, 908, 980, 1460, 1541, 1893
GluI	GCNGC	5 cut(s)	304, 516, 1247, 1367, 1809
GsuI	CTGGAG	1 cut(s)	504
HaeIII	GGCC	8 cut(s)	99, 317, 342, 1188, 1571, 1636, 1847, 1885
HapII	CCGG	3 cut(s)	348, 1189, 1201
HgaI	GACGC	1 cut(s)	454
Hin1II	CATG	9 cut(s)	197, 479, 715, 932, 1270, 1382, 1496, 1664, 1825
HindIII	AAGCTT	3 cut(s)	11, 161, 1279
HinfI	GANTC	5 cut(s)	239, 556, 1139, 1402, 1994
HpaII	CCGG	3 cut(s)	348, 1189, 1201
HphI	GGTGA	6 cut(s)	397, 470, 742, 859, 1190, 1324
Hpy166II	GTNNAC	2 cut(s)	291, 405
Hpy188I	TCNGA	7 cut(s)	232, 333, 885, 996, 1105, 1728, 1801
Hpy188III	TCNNGA	9 cut(s)	122, 157, 223, 442, 800, 1143, 1221, 1379, 1655
Hpy8I	GTNNAC	2 cut(s)	291, 405
Hpy99I	CGWCG	2 cut(s)	337, 1589
HpyCH4III	ACNGT	3 cut(s)	1218, 1906, 1916
HpyCH4IV	ACGT	1 cut(s)	1587
HpyCH4V	TGCA	6 cut(s)	647, 842, 956, 1118, 1230, 1478
HpyF10VI	GCNNNNNNNGC	2 cut(s)	521, 1601
HpyF3I	CTNAG	6 cut(s)	116, 229, 371, 993, 1308, 1957
HpySE526I	ACGT	1 cut(s)	1587
Hsp92II	CATG	9 cut(s)	197, 479, 715, 932, 1270, 1382, 1496, 1664, 1825
KpnI	GGTACC	2 cut(s)	606, 1540
KroI	GCCGGC	1 cut(s)	1188
KroNI	GCCGGC	1 cut(s)	1190
Ksp22I	TGATCA	1 cut(s)	1300
Kzo9I	GATC	5 cut(s)	138, 438, 483, 1300, 1723
Lsp1109I	GCAGC	3 cut(s)	502, 1233, 1353
MaeI	CTAG	9 cut(s)	26, 35, 122, 834, 908, 980, 1460, 1541, 1893
MaeII	ACGT	1 cut(s)	1587
MalI	GATC	5 cut(s)	140, 440, 485, 1302, 1725
MboI	GATC	5 cut(s)	138, 438, 483, 1300, 1723
MboII	GAAGA	8 cut(s)	723, 955, 980, 1135, 1367, 1394, 1881, 1944
MfeI	CAATTG	1 cut(s)	636
MhlI	GDGCHC	3 cut(s)	506, 1554, 1583
MlsI	TGGCCA	1 cut(s)	1847
MluNI	TGGCCA	1 cut(s)	1847
MlyI	GAGTC	3 cut(s)	233, 550, 2003
MmeI	TCCRAC	7 cut(s)	304, 356, 414, 752, 1504, 1673, 1888
Mox20I	TGGCCA	1 cut(s)	1847
MroNI	GCCGGC	1 cut(s)	1188
MscI	TGGCCA	1 cut(s)	1847
MseI	TTAA	6 cut(s)	111, 1002, 1320, 1338, 1641, 1901
MslI	CAYNNNNRTG	2 cut(s)	1410, 1586
Msp20I	TGGCCA	1 cut(s)	1847
MspA1I	CMGCKG	4 cut(s)	303, 515, 524, 1808
MspI	CCGG	3 cut(s)	348, 1189, 1201
MspR9I	CCNGG	1 cut(s)	348
MunI	CAATTG	1 cut(s)	636
MwoI	GCNNNNNNNGC	2 cut(s)	521, 1601
NaeI	GCCGGC	1 cut(s)	1190
NciI	CCSGG	1 cut(s)	348
NcoI	CCATGG	1 cut(s)	1492
NdeI	CATATG	1 cut(s)	1984
NdeII	GATC	5 cut(s)	138, 438, 483, 1300, 1723
NgoMIV	GCCGGC	1 cut(s)	1188
NlaIII	CATG	9 cut(s)	197, 479, 715, 932, 1270, 1382, 1496, 1664, 1825
NlaIV	GGNNCC	7 cut(s)	604, 633, 1328, 1538, 1653, 1803, 1969
NmeAIII	GCCGAG	1 cut(s)	1777
NmuCI	GTSAC	8 cut(s)	458, 508, 622, 1196, 1312, 1872, 1987, 1998
NspI	RCATGY	3 cut(s)	1270, 1664, 1825
OliI	CACNNNNGTG	1 cut(s)	1586
PaeI	GCATGC	1 cut(s)	1825
PagI	TCATGA	1 cut(s)	1378
PceI	AGGCCT	1 cut(s)	342
PciI	ACATGT	1 cut(s)	1660
PdiI	GCCGGC	1 cut(s)	1190
PfeI	GAWTC	2 cut(s)	1139, 1402
PflMI	CCANNNNNTGG	1 cut(s)	448
PkrI	GCNGC	5 cut(s)	305, 517, 1248, 1368, 1810
PleI	GAGTC	3 cut(s)	233, 550, 2002
PpsI	GAGTC	3 cut(s)	233, 550, 2002
PpuMI	RGGWCCY	2 cut(s)	550, 1968
PscI	ACATGT	1 cut(s)	1660
Psp124BI	GAGCTC	1 cut(s)	506
Psp5II	RGGWCCY	2 cut(s)	550, 1968
PspEI	GGTNACC	1 cut(s)	1312
PspN4I	GGNNCC	7 cut(s)	604, 633, 1328, 1538, 1653, 1803, 1969
PspPI	GGNCC	8 cut(s)	550, 740, 855, 989, 1569, 1652, 1883, 1968
PspPPI	RGGWCCY	2 cut(s)	550, 1968
PstNI	CAGNNNCTG	2 cut(s)	370, 448
PvuII	CAGCTG	2 cut(s)	515, 524
RseI	CAYNNNNRTG	2 cut(s)	1410, 1586
SacI	GAGCTC	1 cut(s)	506
SaqAI	TTAA	6 cut(s)	111, 1002, 1320, 1338, 1641, 1901
SatI	GCNGC	5 cut(s)	304, 516, 1247, 1367, 1809
Sau3AI	GATC	5 cut(s)	138, 438, 483, 1300, 1723
Sau96I	GGNCC	8 cut(s)	550, 740, 855, 989, 1569, 1652, 1883, 1968
ScaI	AGTACT	2 cut(s)	39, 1841
SchI	GAGTC	3 cut(s)	233, 550, 2003
ScrFI	CCNGG	1 cut(s)	348
SduI	GDGCHC	3 cut(s)	506, 1554, 1583
SfcI	CTRYAG	1 cut(s)	762
SinI	GGWCC	6 cut(s)	550, 740, 855, 989, 1652, 1968
SmiMI	CAYNNNNRTG	2 cut(s)	1410, 1586
SmlI	CTYRAG	3 cut(s)	499, 798, 1712
SmoI	CTYRAG	3 cut(s)	499, 798, 1712
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1825
SseBI	AGGCCT	1 cut(s)	342
SsiI	CCGC	5 cut(s)	243, 303, 657, 1626, 1808
SspMI	CTAG	9 cut(s)	26, 35, 122, 834, 908, 980, 1460, 1541, 1893
SstI	GAGCTC	1 cut(s)	506
StuI	AGGCCT	1 cut(s)	342
StyD4I	CCNGG	1 cut(s)	346
StyI	CCWWGG	1 cut(s)	1492
TaaI	ACNGT	3 cut(s)	1218, 1906, 1916
TaiI	ACGT	1 cut(s)	1590
TaqI	TCGA	3 cut(s)	359, 486, 1614
TatI	WGTACW	5 cut(s)	37, 288, 1005, 1210, 1839
TauI	GCSGC	2 cut(s)	306, 1811
TfiI	GAWTC	2 cut(s)	1139, 1402
Tru1I	TTAA	6 cut(s)	111, 1002, 1320, 1338, 1641, 1901
Tru9I	TTAA	6 cut(s)	111, 1002, 1320, 1338, 1641, 1901
TscAI	CASTG	2 cut(s)	897, 1125
TseFI	GTSAC	8 cut(s)	458, 508, 622, 1196, 1312, 1872, 1987, 1998
TseI	GCWGC	3 cut(s)	515, 1246, 1366
Tsp45I	GTSAC	8 cut(s)	458, 508, 622, 1196, 1312, 1872, 1987, 1998
TspDTI	ATGAA	8 cut(s)	64, 800, 917, 1169, 1367, 1394, 1395, 1968
TspGWI	ACGGA	3 cut(s)	732, 1290, 1754
TspRI	CASTG	2 cut(s)	897, 1125
Van91I	CCANNNNNTGG	1 cut(s)	448
VpaK11BI	GGWCC	6 cut(s)	550, 740, 855, 989, 1652, 1968
XapI	RAATTY	4 cut(s)	452, 1160, 1204, 1445
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	3 cut(s)	1270, 1664, 1825
XspI	CTAG	9 cut(s)	26, 35, 122, 834, 908, 980, 1460, 1541, 1893
ZrmI	AGTACT	2 cut(s)	39, 1841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.