AT3G46650

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000714
Physical Location & Seq
Reverse (-)
17185453 .. 17187821
2369 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46650.1

Sequence Viewer

Length: 1308 bp
ATGGAGAAGAAAATGGAAGCAAAGAGAAGGATAGTGTTAGTTCCAATTCCAGCACAAGGTCATGTAACTCCACTGATGCAACTTGGGAAAGTACTTAACTCGAAGGGCTTCTCAATTACAGTTGTTGAGGGACATTTCAATCAAGTAAGCTCTTCTTCTCAACACTTCCCTGGTTTTCAGTTTGTCACCATAAAAGAAAGCTTACCAGAGTCTGAATTCGAGAAACTCGGAGGAATCGAGTCTATGATAACGCTCAACAAAACAAGCGAGGCAAGCTTCAAGGACTGTATAAGTCAGTTGTTGCTACAACAAGGCAATGATATTGCATGTATCATTTACGACGAGTACATGTACTTCTGTGGAGCTGCAGCTAAGGAGTTCAGCATTCCTAGTGTCATATTCAGCACTCAAAGTGCTGCAAATTACGTTTCACATCCTGATATGCAAGACAAGGTGGTGGAAAATTTGTATCCATTACGATACAAAGACCTACCGACTTCAGGAATGGGGCCACTAGATCGATTTTTTGAGCTCTGTAGGGAAGTAGCCAACAAAAGAACAGCTTCAGCTGTTATCATCAACACGGTGAGCTGTCTAGAGAGCTCGTCTCTGTCATGGCTGGAACAAAAAGTAGGAATTTCTGTGTATCCATTAGGCCCTCTTCACATGACAGATTCATCACCTTCTAGTTTACTTGAAGAGGACAGGAGCTGCATTGAATGGCTGAACAAGCAGAAACCAAAGTCAGTGATATACATAAGCATAGGAACACTTGGTCAAATGGAAACCAAGGAAGTTTTGGAGATGTCTTGGGGGTTGTGTAATAGCAACCAACCATTTCTATGGGTTATCCGAGCGGGTTCTATCCTTGGCACTAACGGAATAGAGTCATTGCCAGAGGATGTCAATAAAATGGTCTCTGAAAGAGGATACATTGTGAAACGAGCACCGCAGATAGAAGTACTTGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACTCAATACTCGAGAGCATTGGAGAAGGAGTTCCAATGATTTGCAAGCCCTTTCATGGCGAGCAAAAGTTGAATGCAATGTACTTGGAGTGTGTTTGGAAAATTGGGATTCAAGTGGAGGGTGATCTAGAAAGAGGAGCGGTCGAGAGAGCTGTGAAGAGGTTAACGGTTTTCGAAGAAGGAGAGGAAATGAGAAAGAGAGCCGTCACTTTGAAGGAGGAGCTGAGAGCCTCTGTTAGAGGTGGAGGTTCTTTACACAACTCGCTAAAGGAGTTTGAACACTTCATGATGACTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

435

Amino Acids

48.53

Weight (kDa)

5.79

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 243 - 391 9.7e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 857, 1148
AciI CCGC 3 cut(s) 857, 950, 1148
AcsI RAATTY 3 cut(s) 215, 463, 636
AcuI CTGAAG 2 cut(s) 483, 549
AfaI GTAC 5 cut(s) 93, 347, 353, 963, 1091
AfiI CCNNNNNNNGG 4 cut(s) 56, 500, 980, 1064
AflIII ACRYGT 1 cut(s) 348
AgsI TTSAA 8 cut(s) 139, 280, 698, 719, 1081, 1121, 1222, 1286
AjnI CCWGG 1 cut(s) 169
AloI GAACNNNNNNTCC 2 cut(s) 1023, 1055
Alw21I GWGCWC 3 cut(s) 534, 605, 949
Alw26I GTCTC 2 cut(s) 612, 922
AlwNI CAGNNNCTG 2 cut(s) 212, 711
Ama87I CYCGRG 1 cut(s) 1019
AoxI GGCC 2 cut(s) 509, 655
ApeKI GCWGC 4 cut(s) 365, 368, 416, 711
ApoI RAATTY 3 cut(s) 215, 463, 636
Asp700I GAANNNNTTC 3 cut(s) 107, 562, 1038
AspS9I GGNCC 2 cut(s) 509, 656
AsuHPI GGTGA 4 cut(s) 178, 598, 672, 1142
AsuII TTCGAA 1 cut(s) 1182
AvaI CYCGRG 1 cut(s) 1019
BanII GRGCYC 2 cut(s) 534, 605
BarI GAAGNNNNNNTAC 2 cut(s) 338, 370
Bbv12I GWGCWC 3 cut(s) 534, 605, 949
BbvI GCAGC 4 cut(s) 352, 380, 403, 698
BccI CCATC 1 cut(s) 999
BceAI ACGGC 1 cut(s) 1196
BciT130I CCWGG 1 cut(s) 171
BciVI GTATCC 3 cut(s) 480, 657, 923
BcoDI GTCTC 2 cut(s) 612, 922
BfaI CTAG 5 cut(s) 390, 515, 596, 687, 1136
BfmI CTRYAG 3 cut(s) 366, 535, 975
BfuI GTATCC 3 cut(s) 480, 657, 923
BisI GCNGC 4 cut(s) 366, 369, 417, 712
BlsI GCNGC 4 cut(s) 367, 370, 418, 713
BmcAI AGTACT 2 cut(s) 93, 963
Bme1390I CCNGG 1 cut(s) 171
BmeT110I CYCGRG 1 cut(s) 1019
BmgT120I GGNCC 2 cut(s) 509, 656
BmiI GGNNCC 2 cut(s) 510, 995
BmrFI CCNGG 1 cut(s) 171
BmsI GCATC 1 cut(s) 66
BplI GAGNNNNNCTC 2 cut(s) 592, 624
BpmI CTGGAG 1 cut(s) 1012
Bpu10I CCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 1 cut(s) 1182
Bsa29I ATCGAT 1 cut(s) 520
BsaI GGTCTC 1 cut(s) 922
BsaJI CCNNGG 3 cut(s) 169, 789, 868
BsaXI ACNNNNNCTCC 4 cut(s) 985, 1015, 1023, 1053
Bsc4I CCNNNNNNNGG 4 cut(s) 56, 500, 980, 1064
Bse3DI GCAATG 3 cut(s) 322, 890, 1092
BseBI CCWGG 1 cut(s) 171
BseCI ATCGAT 1 cut(s) 520
BseDI CCNNGG 3 cut(s) 169, 789, 868
BseGI GGATG 4 cut(s) 433, 907, 970, 1010
BseLI CCNNNNNNNGG 4 cut(s) 56, 500, 980, 1064
BseMI GCAATG 3 cut(s) 322, 890, 1092
BseMII CTCAG 1 cut(s) 1223
BseRI GAGGAG 2 cut(s) 1158, 1241
BseXI GCAGC 4 cut(s) 352, 380, 403, 698
Bsh1285I CGRYCG 1 cut(s) 1152
BshFI GGCC 2 cut(s) 511, 657
BshVI ATCGAT 1 cut(s) 520
BsiEI CGRYCG 1 cut(s) 1152
BsiHKAI GWGCWC 3 cut(s) 534, 605, 949
BsiHKCI CYCGRG 1 cut(s) 1019
BslFI GGGAC 1 cut(s) 144
BslI CCNNNNNNNGG 4 cut(s) 56, 500, 980, 1064
BsmAI GTCTC 2 cut(s) 612, 922
BsmBI CGTCTC 1 cut(s) 612
BsmFI GGGAC 1 cut(s) 144
BsmI GAATGC 2 cut(s) 384, 1087
BsnI GGCC 2 cut(s) 511, 657
Bso31I GGTCTC 1 cut(s) 922
BsoBI CYCGRG 1 cut(s) 1019
Bsp119I TTCGAA 1 cut(s) 1182
Bsp1286I GDGCHC 3 cut(s) 534, 605, 949
Bsp143I GATC 2 cut(s) 517, 1132
BspACI CCGC 3 cut(s) 857, 950, 1148
BspANI GGCC 2 cut(s) 511, 657
BspCNI CTCAG 1 cut(s) 1224
BspDI ATCGAT 1 cut(s) 520
BspHI TCATGA 1 cut(s) 1293
BspLI GGNNCC 2 cut(s) 510, 995
BspMAI CTGCAG 2 cut(s) 370, 979
BspQI GCTCTTC 1 cut(s) 157
BspT104I TTCGAA 1 cut(s) 1182
BspTNI GGTCTC 1 cut(s) 922
BsrBI CCGCTC 2 cut(s) 857, 1148
BsrDI GCAATG 3 cut(s) 322, 890, 1092
BssECI CCNNGG 3 cut(s) 169, 789, 868
BssMI GATC 2 cut(s) 517, 1132
BssT1I CCWWGG 2 cut(s) 789, 868
Bst2UI CCWGG 1 cut(s) 171
Bst4CI ACNGT 5 cut(s) 121, 287, 586, 1001, 1177
Bst6I CTCTTC 4 cut(s) 157, 666, 693, 1160
BstBI TTCGAA 1 cut(s) 1182
BstC8I GCNNGC 3 cut(s) 274, 1055, 1070
BstDEI CTNAG 2 cut(s) 372, 1232
BstF5I GGATG 4 cut(s) 433, 907, 970, 1010
BstKTI GATC 2 cut(s) 520, 1135
BstMAI GTCTC 2 cut(s) 612, 922
BstMBI GATC 2 cut(s) 517, 1132
BstMCI CGRYCG 1 cut(s) 1152
BstMWI GCNNNNNNNGC 3 cut(s) 273, 730, 993
BstNI CCWGG 1 cut(s) 171
BstNSI RCATGY 2 cut(s) 330, 352
BstSCI CCNGG 1 cut(s) 169
BstSFI CTRYAG 3 cut(s) 366, 535, 975
BstV1I GCAGC 4 cut(s) 352, 380, 403, 698
BstXI CCANNNNNNTGG 1 cut(s) 843
Bsu15I ATCGAT 1 cut(s) 520
BsuI GTATCC 3 cut(s) 480, 657, 923
BsuRI GGCC 2 cut(s) 511, 657
BsuTUI ATCGAT 1 cut(s) 520
BtsCI GGATG 4 cut(s) 433, 907, 970, 1010
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 4 cut(s) 71, 753, 984, 997
Cac8I GCNNGC 3 cut(s) 274, 1055, 1070
CaiI CAGNNNCTG 2 cut(s) 212, 711
CciI TCATGA 1 cut(s) 1293
Cfr13I GGNCC 2 cut(s) 509, 656
ClaI ATCGAT 1 cut(s) 520
Csp6I GTAC 5 cut(s) 92, 346, 352, 962, 1090
CviAII CATG 7 cut(s) 62, 327, 349, 615, 667, 1064, 1294
CviQI GTAC 5 cut(s) 92, 346, 352, 962, 1090
DdeI CTNAG 2 cut(s) 372, 1232
DpnI GATC 2 cut(s) 519, 1134
DpnII GATC 2 cut(s) 517, 1132
Eam1104I CTCTTC 4 cut(s) 157, 666, 693, 1160
EarI CTCTTC 4 cut(s) 157, 666, 693, 1160
Ecl136II GAGCTC 2 cut(s) 532, 603
Eco130I CCWWGG 2 cut(s) 789, 868
Eco24I GRGCYC 2 cut(s) 534, 605
Eco31I GGTCTC 1 cut(s) 922
Eco53kI GAGCTC 2 cut(s) 532, 603
Eco57I CTGAAG 2 cut(s) 483, 549
Eco88I CYCGRG 1 cut(s) 1019
EcoICRI GAGCTC 2 cut(s) 532, 603
EcoO109I RGGNCCY 1 cut(s) 656
EcoRI GAATTC 1 cut(s) 215
EcoRII CCWGG 1 cut(s) 169
EcoT14I CCWWGG 2 cut(s) 789, 868
EcoT38I GRGCYC 2 cut(s) 534, 605
ErhI CCWWGG 2 cut(s) 789, 868
Esp3I CGTCTC 1 cut(s) 612
FaeI CATG 7 cut(s) 65, 330, 352, 618, 670, 1067, 1297
FalI AAGNNNNNCTT 4 cut(s) 139, 171, 547, 579
FaqI GGGAC 1 cut(s) 144
FatI CATG 7 cut(s) 61, 326, 348, 614, 666, 1063, 1293
FauI CCCGC 1 cut(s) 850
Fnu4HI GCNGC 4 cut(s) 366, 369, 417, 712
FokI GGATG 4 cut(s) 420, 914, 957, 1017
FriOI GRGCYC 2 cut(s) 534, 605
Fsp4HI GCNGC 4 cut(s) 366, 369, 417, 712
FspBI CTAG 5 cut(s) 390, 515, 596, 687, 1136
GluI GCNGC 4 cut(s) 366, 369, 417, 712
GsuI CTGGAG 1 cut(s) 1012
HaeIII GGCC 2 cut(s) 511, 657
Hin1II CATG 7 cut(s) 65, 330, 352, 618, 670, 1067, 1297
HincII GTYRAC 1 cut(s) 1173
HindII GTYRAC 1 cut(s) 1173
HindIII AAGCTT 2 cut(s) 199, 274
HinfI GANTC 7 cut(s) 209, 234, 239, 674, 887, 1117, 1300
HpaI GTTAAC 1 cut(s) 1173
HphI GGTGA 4 cut(s) 178, 598, 672, 1142
Hpy166II GTNNAC 2 cut(s) 692, 1173
Hpy188I TCNGA 4 cut(s) 214, 230, 854, 922
Hpy188III TCNNGA 9 cut(s) 220, 437, 501, 596, 991, 1021, 1136, 1153, 1294
Hpy8I GTNNAC 2 cut(s) 692, 1173
Hpy99I CGWCG 1 cut(s) 344
HpyAV CCTTC 6 cut(s) 21, 97, 693, 1028, 1181, 1216
HpyCH4III ACNGT 5 cut(s) 121, 287, 586, 1001, 1177
HpyCH4IV ACGT 1 cut(s) 426
HpyCH4V TGCA 9 cut(s) 79, 326, 368, 419, 445, 714, 977, 1053, 1085
HpyF10VI GCNNNNNNNGC 3 cut(s) 273, 730, 993
HpyF3I CTNAG 2 cut(s) 372, 1232
HpySE526I ACGT 1 cut(s) 426
Hsp92II CATG 7 cut(s) 65, 330, 352, 618, 670, 1067, 1297
KspAI GTTAAC 1 cut(s) 1173
Kzo9I GATC 2 cut(s) 517, 1132
LguI GCTCTTC 1 cut(s) 157
LmnI GCTCC 5 cut(s) 362, 708, 993, 1145, 1228
Lsp1109I GCAGC 4 cut(s) 352, 380, 403, 698
LweI GCATC 1 cut(s) 66
MaeI CTAG 5 cut(s) 390, 515, 596, 687, 1136
MaeII ACGT 1 cut(s) 426
MaeIII GTNAC 3 cut(s) 64, 184, 1213
MalI GATC 2 cut(s) 519, 1134
MbiI CCGCTC 2 cut(s) 857, 1148
MboI GATC 2 cut(s) 517, 1132
MboII GAAGA 7 cut(s) 19, 144, 147, 653, 710, 1177, 1196
MhlI GDGCHC 3 cut(s) 534, 605, 949
MluCI AATT 7 cut(s) 45, 114, 215, 421, 463, 636, 1110
MlyI GAGTC 4 cut(s) 218, 248, 896, 1294
MroXI GAANNNNTTC 3 cut(s) 107, 562, 1038
MseI TTAA 2 cut(s) 96, 1172
MslI CAYNNNNRTG 1 cut(s) 841
MspA1I CMGCKG 1 cut(s) 569
MspR9I CCNGG 1 cut(s) 171
Mva1269I GAATGC 2 cut(s) 384, 1087
MvaI CCWGG 1 cut(s) 171
MwoI GCNNNNNNNGC 3 cut(s) 273, 730, 993
NdeII GATC 2 cut(s) 517, 1132
NlaIII CATG 7 cut(s) 65, 330, 352, 618, 670, 1067, 1297
NlaIV GGNNCC 2 cut(s) 510, 995
NmuCI GTSAC 2 cut(s) 184, 1213
NspI RCATGY 2 cut(s) 330, 352
NspV TTCGAA 1 cut(s) 1182
PaeR7I CTCGAG 1 cut(s) 1019
PagI TCATGA 1 cut(s) 1293
PciI ACATGT 1 cut(s) 348
PciSI GCTCTTC 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 234
PctI GAATGC 2 cut(s) 384, 1087
PdmI GAANNNNTTC 3 cut(s) 107, 562, 1038
PfeI GAWTC 3 cut(s) 234, 674, 1117
PkrI GCNGC 4 cut(s) 367, 370, 418, 713
PleI GAGTC 4 cut(s) 217, 247, 895, 1294
PpsI GAGTC 4 cut(s) 217, 247, 895, 1294
PscI ACATGT 1 cut(s) 348
Psp124BI GAGCTC 2 cut(s) 534, 605
Psp6I CCWGG 1 cut(s) 169
PspGI CCWGG 1 cut(s) 169
PspN4I GGNNCC 2 cut(s) 510, 995
PspPI GGNCC 2 cut(s) 509, 656
PstI CTGCAG 2 cut(s) 370, 979
PstNI CAGNNNCTG 2 cut(s) 212, 711
PvuII CAGCTG 1 cut(s) 569
RsaI GTAC 5 cut(s) 93, 347, 353, 963, 1091
RsaNI GTAC 5 cut(s) 92, 346, 352, 962, 1090
RseI CAYNNNNRTG 1 cut(s) 841
SacI GAGCTC 2 cut(s) 534, 605
SapI GCTCTTC 1 cut(s) 157
SaqAI TTAA 2 cut(s) 96, 1172
SatI GCNGC 4 cut(s) 366, 369, 417, 712
Sau3AI GATC 2 cut(s) 517, 1132
Sau96I GGNCC 2 cut(s) 509, 656
ScaI AGTACT 2 cut(s) 93, 963
SchI GAGTC 4 cut(s) 218, 248, 896, 1294
ScrFI CCNGG 1 cut(s) 171
SduI GDGCHC 3 cut(s) 534, 605, 949
SfaNI GCATC 1 cut(s) 66
SfcI CTRYAG 3 cut(s) 366, 535, 975
Sfr274I CTCGAG 1 cut(s) 1019
SfuI TTCGAA 1 cut(s) 1182
SlaI CTCGAG 1 cut(s) 1019
SmiMI CAYNNNNRTG 1 cut(s) 841
SmlI CTYRAG 1 cut(s) 1019
SmoI CTYRAG 1 cut(s) 1019
Sse9I AATT 7 cut(s) 45, 114, 215, 421, 463, 636, 1110
SsiI CCGC 3 cut(s) 857, 950, 1148
SspMI CTAG 5 cut(s) 390, 515, 596, 687, 1136
SstI GAGCTC 2 cut(s) 534, 605
StyD4I CCNGG 1 cut(s) 169
StyI CCWWGG 2 cut(s) 789, 868
TaaI ACNGT 5 cut(s) 121, 287, 586, 1001, 1177
TaiI ACGT 1 cut(s) 429
TaqI TCGA 7 cut(s) 101, 219, 237, 520, 1020, 1152, 1182
TasI AATT 7 cut(s) 45, 114, 215, 421, 463, 636, 1110
TatI WGTACW 5 cut(s) 91, 345, 351, 961, 1089
TfiI GAWTC 3 cut(s) 234, 674, 1117
Tru1I TTAA 2 cut(s) 96, 1172
Tru9I TTAA 2 cut(s) 96, 1172
TscAI CASTG 4 cut(s) 78, 753, 984, 1004
TseFI GTSAC 2 cut(s) 184, 1213
TseI GCWGC 4 cut(s) 365, 368, 416, 711
Tsp45I GTSAC 2 cut(s) 184, 1213
TspDTI ATGAA 3 cut(s) 666, 1052, 1282
TspGWI ACGGA 1 cut(s) 894
TspRI CASTG 4 cut(s) 78, 753, 984, 1004
XapI RAATTY 3 cut(s) 215, 463, 636
XbaI TCTAGA 2 cut(s) 595, 1135
XceI RCATGY 2 cut(s) 330, 352
XcmI CCANNNNNNNNNTGG 1 cut(s) 796
XhoI CTCGAG 1 cut(s) 1019
XmnI GAANNNNTTC 3 cut(s) 107, 562, 1038
XspI CTAG 5 cut(s) 390, 515, 596, 687, 1136
ZrmI AGTACT 2 cut(s) 93, 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.