AT5G05870

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000714
Physical Location & Seq
Forward (+)
1767630 .. 1769477
1848 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G05870.1

Sequence Viewer

Length: 1395 bp
ATGGAGAAGAGAAACGAGAGACAAGTGATTCTTTTTCCTCTACCATTACAAGGTTGCATAAACCCTATGCTTCAGCTAGCAAAGATCCTTTACTCAAGAGGTTTTTCGATCACCATCATCCACACGCGCTTCAACGCGCCCAAATCTTCAGACCATCCTCTCTTCACTTTCTTACAAATCCGCGACGGCTTGTCTGAATCTCAGACTCAATCTCGTGATCTTTTGCTTCAACTCACGCTTCTCAACAACAATTGTCAGATCCCATTTCGAGAGTGTTTGGCTAAACTCATTAAACCTAGTTCAGATTCAGGAACAGAGGATAGGAAAATTAGCTGTGTGATCGATGATTCCGGTTGGGTTTTCACACAATCCGTGGCGGAGAGTTTTAATCTTCCTCGATTTGTCCTCTGTGCTTATAAGTTCTCTTTCTTTCTCGGACATTTTCTTGTTCCTCAGATTCGTCGTGAAGGGTTTCTTCCAGTACCAGATTCGGAGGCAGATGATCTAGTTCCTGAGTTTCCACCGCTTCGAAAGAAAGATCTTTCGAGAATTATGGGAACCAGCGCTCAGAGTAAGCCTCTAGATGCTTACTTGCTTAAGATACTCGACGCGACGAAGCCAGCTTCAGGGATTATAGTTATGTCCTGCAAAGAGCTTGACCATGATTCACTTGCTGAGTCCAACAAAGTTTTCAGCATTCCGATATTTCCCATTGGCCCTTTTCACATTCATGACGTCCCAGCCTCGTCTAGCAGCTTGTTAGAACCGGACCAGAGTTGCATTCCATGGTTAGATATGCGTGAAACGAGATCAGTAGTCTACGTGAGCTTAGGGAGCATTGCGAGTCTTAACGAGTCTGACTTCTTGGAGATTGCTTGTGGACTAAGAAACACCAACCAATCCTTCTTGTGGGTTGTCCGGCCTGGTTCAGTCCATGGCAGAGATTGGATCGAATCATTACCTTCAGGGTTCATGGAAAGTCTCGATGGTAAAGGAAAGATAGTGAGATGGGCACCGCAGCTAGACGTTCTTGCGCATAGAGCCACGGGAGGGTTTTTGACTCATAATGGATGGAACTCGACATTAGAGAGTATATGCGAAGGAGTACCTATGATCTGCTTGCCTTGTAAGTGGGACCAATTTGTAAACGCGAGATTCATAAGCGAAGTTTGGAGGGTTGGGATTCACTTGGAAGGTCGGATAGAGCGAAGAGAAATCGAGAGAGCTGTTATAAGACTAATGGTTGAGTCGAAAGGAGAAGAGATTCGAGGTAGAATCAAAGTCTTGCGAGACGAAGTAAGAAGGTCAGTTAAACAAGGAGGTTCGTCATATCGATCTTTAGATGAGTTGGTTGATCGTATATCAATCATCATCGAGCCACTAGTGCCTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

464

Amino Acids

52.36

Weight (kDa)

6.58

Isoelectric Point (pI)

58.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 270 - 414 7.6e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 417, 1232
AatII GACGTC 1 cut(s) 738
Acc16I TGCGCA 1 cut(s) 1035
AccB1I GGYRCC 1 cut(s) 1012
AccI GTMKAC 1 cut(s) 819
AccII CGCG 5 cut(s) 127, 137, 183, 611, 1151
AciI CCGC 4 cut(s) 181, 377, 524, 1016
AclWI GGATC 3 cut(s) 79, 253, 956
AcuI CTGAAG 4 cut(s) 56, 132, 609, 948
AcyI GRCGYC 1 cut(s) 735
AfaI GTAC 2 cut(s) 483, 1107
AfeI AGCGCT 1 cut(s) 565
AfiI CCNNNNNNNGG 4 cut(s) 50, 626, 909, 1050
AflII CTTAAG 1 cut(s) 596
AgsI TTSAA 2 cut(s) 133, 230
AhdI GACNNNNNGTC 1 cut(s) 190
AhlI ACTAGT 1 cut(s) 1381
AjnI CCWGG 1 cut(s) 922
AjuI GAANNNNNNNTTGG 4 cut(s) 674, 706, 887, 919
AluBI AGCT 8 cut(s) 76, 333, 623, 655, 756, 828, 1021, 1226
AluI AGCT 8 cut(s) 76, 333, 623, 655, 756, 828, 1021, 1226
Alw26I GTCTC 3 cut(s) 13, 986, 1284
AlwI GGATC 3 cut(s) 79, 253, 956
Aor51HI AGCGCT 1 cut(s) 565
AoxI GGCC 2 cut(s) 715, 920
ApeKI GCWGC 2 cut(s) 753, 1018
Asp700I GAANNNNTTC 2 cut(s) 471, 1263
AspLEI GCGC 4 cut(s) 129, 139, 566, 1036
AspS9I GGNCC 3 cut(s) 716, 769, 1135
AsuHPI GGTGA 1 cut(s) 103
AsuII TTCGAA 1 cut(s) 529
AsuNHI GCTAGC 1 cut(s) 76
AvaII GGWCC 2 cut(s) 769, 1135
BaeGI GKGCMC 1 cut(s) 1015
BanI GGYRCC 1 cut(s) 1012
BauI CACGAG 1 cut(s) 213
BbvI GCAGC 2 cut(s) 765, 1030
BccI CCATC 5 cut(s) 122, 162, 980, 1002, 1065
BceAI ACGGC 1 cut(s) 202
BciT130I CCWGG 1 cut(s) 924
BcoDI GTCTC 3 cut(s) 13, 986, 1284
BcuI ACTAGT 1 cut(s) 1381
BfaI CTAG 7 cut(s) 77, 297, 506, 581, 750, 1022, 1382
BfoI RGCGCY 1 cut(s) 567
BfrI CTTAAG 1 cut(s) 596
BglII AGATCT 1 cut(s) 538
BisI GCNGC 2 cut(s) 754, 1019
BlsI GCNGC 2 cut(s) 755, 1020
Bme1390I CCNGG 1 cut(s) 924
Bme18I GGWCC 2 cut(s) 769, 1135
BmeRI GACNNNNNGTC 1 cut(s) 190
BmgT120I GGNCC 3 cut(s) 716, 769, 1135
BmiI GGNNCC 3 cut(s) 559, 1014, 1136
BmrFI CCNGG 1 cut(s) 924
BmsI GCATC 1 cut(s) 574
BmtI GCTAGC 1 cut(s) 80
BplI GAGNNNNNCTC 2 cut(s) 562, 594
Bpu10I CCTNAGC 1 cut(s) 829
Bpu14I TTCGAA 1 cut(s) 529
BpuEI CTTGAG 1 cut(s) 79
Bsa29I ATCGAT 2 cut(s) 342, 1333
BsaAI YACGTR 2 cut(s) 823, 1392
BsaBI GATNNNNATC 1 cut(s) 113
BsaHI GRCGYC 1 cut(s) 735
BsaJI CCNNGG 4 cut(s) 372, 785, 934, 1044
BsaWI WCCGGW 2 cut(s) 350, 766
Bsc4I CCNNNNNNNGG 4 cut(s) 50, 626, 909, 1050
Bse1I ACTGG 1 cut(s) 479
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 113
BseBI CCWGG 1 cut(s) 924
BseCI ATCGAT 2 cut(s) 342, 1333
BseDI CCNNGG 4 cut(s) 372, 785, 934, 1044
BseGI GGATG 3 cut(s) 117, 154, 1076
BseJI GATNNNNATC 1 cut(s) 113
BseLI CCNNNNNNNGG 4 cut(s) 50, 626, 909, 1050
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 5 cut(s) 215, 467, 504, 581, 666
BseNI ACTGG 1 cut(s) 479
BseSI GKGCMC 1 cut(s) 1015
BseXI GCAGC 2 cut(s) 765, 1030
BseYI CCCAGC 1 cut(s) 739
Bsh1236I CGCG 5 cut(s) 127, 137, 183, 611, 1151
BshFI GGCC 2 cut(s) 717, 922
BshNI GGYRCC 1 cut(s) 1012
BshVI ATCGAT 2 cut(s) 342, 1333
BsiSI CCGG 3 cut(s) 351, 767, 919
BslFI GGGAC 2 cut(s) 722, 1148
BslI CCNNNNNNNGG 4 cut(s) 50, 626, 909, 1050
BsmAI GTCTC 3 cut(s) 13, 986, 1284
BsmBI CGTCTC 1 cut(s) 1284
BsmFI GGGAC 2 cut(s) 722, 1148
BsmI GAATGC 2 cut(s) 696, 780
BsnI GGCC 2 cut(s) 717, 922
Bsp119I TTCGAA 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 1015
Bsp19I CCATGG 2 cut(s) 785, 934
BspACI CCGC 4 cut(s) 181, 377, 524, 1016
BspANI GGCC 2 cut(s) 717, 922
BspCNI CTCAG 5 cut(s) 214, 466, 505, 580, 667
BspDI ATCGAT 2 cut(s) 342, 1333
BspFNI CGCG 5 cut(s) 127, 137, 183, 611, 1151
BspHI TCATGA 1 cut(s) 730
BspLI GGNNCC 3 cut(s) 559, 1014, 1136
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 3 cut(s) 79, 253, 956
BspT104I TTCGAA 1 cut(s) 529
BspT107I GGYRCC 1 cut(s) 1012
BspTI CTTAAG 1 cut(s) 596
BsrDI GCAATG 1 cut(s) 837
BsrI ACTGG 1 cut(s) 479
BssECI CCNNGG 4 cut(s) 372, 785, 934, 1044
BssNI GRCGYC 1 cut(s) 735
BssSI CACGAG 1 cut(s) 213
BssT1I CCWWGG 2 cut(s) 785, 934
Bst2BI CACGAG 1 cut(s) 213
Bst2UI CCWGG 1 cut(s) 924
Bst6I CTCTTC 4 cut(s) 2, 167, 1204, 1254
BstACI GRCGYC 1 cut(s) 735
BstAFI CTTAAG 1 cut(s) 596
BstBAI YACGTR 2 cut(s) 823, 1392
BstBI TTCGAA 1 cut(s) 529
BstC8I GCNNGC 3 cut(s) 78, 621, 1121
BstDEI CTNAG 7 cut(s) 201, 453, 513, 567, 675, 829, 884
BstDSI CCRYGG 4 cut(s) 372, 785, 934, 1044
BstF5I GGATG 3 cut(s) 117, 154, 1076
BstFNI CGCG 5 cut(s) 127, 137, 183, 611, 1151
BstH2I RGCGCY 1 cut(s) 567
BstHHI GCGC 4 cut(s) 129, 139, 566, 1036
BstMAI GTCTC 3 cut(s) 13, 986, 1284
BstMWI GCNNNNNNNGC 3 cut(s) 834, 1040, 1384
BstNI CCWGG 1 cut(s) 924
BstSCI CCNGG 1 cut(s) 922
BstSLI GKGCMC 1 cut(s) 1015
BstUI CGCG 5 cut(s) 127, 137, 183, 611, 1151
BstV1I GCAGC 2 cut(s) 765, 1030
BstX2I RGATCY 3 cut(s) 84, 258, 538
BstYI RGATCY 3 cut(s) 84, 258, 538
Bsu15I ATCGAT 2 cut(s) 342, 1333
BsuRI GGCC 2 cut(s) 717, 922
BsuTUI ATCGAT 2 cut(s) 342, 1333
BtgI CCRYGG 4 cut(s) 372, 785, 934, 1044
BtsCI GGATG 3 cut(s) 117, 154, 1076
Cac8I GCNNGC 3 cut(s) 78, 621, 1121
CciI TCATGA 1 cut(s) 730
CfoI GCGC 4 cut(s) 129, 139, 566, 1036
Cfr13I GGNCC 3 cut(s) 716, 769, 1135
ClaI ATCGAT 2 cut(s) 342, 1333
CseI GACGC 1 cut(s) 617
Csp6I GTAC 2 cut(s) 482, 1106
CviAII CATG 5 cut(s) 662, 731, 786, 935, 973
CviQI GTAC 2 cut(s) 482, 1106
DdeI CTNAG 7 cut(s) 201, 453, 513, 567, 675, 829, 884
DriI GACNNNNNGTC 1 cut(s) 190
Eam1104I CTCTTC 4 cut(s) 2, 167, 1204, 1254
Eam1105I GACNNNNNGTC 1 cut(s) 190
EarI CTCTTC 4 cut(s) 2, 167, 1204, 1254
EciI GGCGGA 1 cut(s) 392
Eco130I CCWWGG 2 cut(s) 785, 934
Eco47I GGWCC 2 cut(s) 769, 1135
Eco47III AGCGCT 1 cut(s) 565
Eco57I CTGAAG 4 cut(s) 56, 132, 609, 948
EcoRII CCWGG 1 cut(s) 922
EcoT14I CCWWGG 2 cut(s) 785, 934
ErhI CCWWGG 2 cut(s) 785, 934
Esp3I CGTCTC 1 cut(s) 1284
FaeI CATG 5 cut(s) 665, 734, 789, 938, 976
FalI AAGNNNNNCTT 4 cut(s) 15, 47, 459, 491
FaqI GGGAC 2 cut(s) 722, 1148
FatI CATG 5 cut(s) 661, 730, 785, 934, 972
FblI GTMKAC 1 cut(s) 819
Fnu4HI GCNGC 2 cut(s) 754, 1019
FokI GGATG 3 cut(s) 104, 141, 1083
Fsp4HI GCNGC 2 cut(s) 754, 1019
FspBI CTAG 7 cut(s) 77, 297, 506, 581, 750, 1022, 1382
FspI TGCGCA 1 cut(s) 1035
GlaI GCGC 4 cut(s) 128, 138, 565, 1035
GluI GCNGC 2 cut(s) 754, 1019
GsaI CCCAGC 1 cut(s) 743
HaeII RGCGCY 1 cut(s) 567
HaeIII GGCC 2 cut(s) 717, 922
HapII CCGG 3 cut(s) 351, 767, 919
HgaI GACGC 1 cut(s) 617
HhaI GCGC 4 cut(s) 129, 139, 566, 1036
Hin1I GRCGYC 1 cut(s) 735
Hin1II CATG 5 cut(s) 665, 734, 789, 938, 976
Hin6I GCGC 4 cut(s) 127, 137, 564, 1034
HinP1I GCGC 4 cut(s) 127, 137, 564, 1034
HpaII CCGG 3 cut(s) 351, 767, 919
HphI GGTGA 1 cut(s) 103
Hpy166II GTNNAC 3 cut(s) 820, 881, 1147
Hpy8I GTNNAC 3 cut(s) 820, 881, 1147
Hpy99I CGWCG 4 cut(s) 188, 465, 611, 616
HpyAV CCTTC 6 cut(s) 461, 913, 972, 1094, 1187, 1296
HpyCH4IV ACGT 4 cut(s) 735, 822, 1026, 1391
HpyCH4V TGCA 3 cut(s) 57, 648, 780
HpyF10VI GCNNNNNNNGC 3 cut(s) 834, 1040, 1384
HpyF3I CTNAG 7 cut(s) 201, 453, 513, 567, 675, 829, 884
HpySE526I ACGT 4 cut(s) 735, 822, 1026, 1391
Hsp92I GRCGYC 1 cut(s) 735
Hsp92II CATG 5 cut(s) 665, 734, 789, 938, 976
HspAI GCGC 4 cut(s) 127, 137, 564, 1034
LmnI GCTCC 1 cut(s) 834
Lsp1109I GCAGC 2 cut(s) 765, 1030
LweI GCATC 1 cut(s) 574
MaeI CTAG 7 cut(s) 77, 297, 506, 581, 750, 1022, 1382
MaeII ACGT 4 cut(s) 735, 822, 1026, 1391
MboII GAAGA 7 cut(s) 19, 138, 154, 383, 467, 1221, 1271
MfeI CAATTG 1 cut(s) 250
MflI RGATCY 3 cut(s) 84, 258, 538
MhlI GDGCHC 1 cut(s) 1015
MluCI AATT 4 cut(s) 250, 327, 549, 1139
MlyI GAGTC 6 cut(s) 199, 686, 853, 863, 1054, 1256
MmeI TCCRAC 2 cut(s) 705, 1178
MroXI GAANNNNTTC 2 cut(s) 471, 1263
MseI TTAA 5 cut(s) 291, 387, 597, 849, 1311
MslI CAYNNNNRTG 1 cut(s) 729
MspCI CTTAAG 1 cut(s) 596
MspI CCGG 3 cut(s) 351, 767, 919
MspR9I CCNGG 1 cut(s) 924
MunI CAATTG 1 cut(s) 250
Mva1269I GAATGC 2 cut(s) 696, 780
MvaI CCWGG 1 cut(s) 924
MvnI CGCG 5 cut(s) 127, 137, 183, 611, 1151
MwoI GCNNNNNNNGC 3 cut(s) 834, 1040, 1384
NcoI CCATGG 2 cut(s) 785, 934
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 5 cut(s) 665, 734, 789, 938, 976
NlaIV GGNNCC 3 cut(s) 559, 1014, 1136
NsbI TGCGCA 1 cut(s) 1035
NspV TTCGAA 1 cut(s) 529
PagI TCATGA 1 cut(s) 730
PcsI WCGNNNNNNNCGW 1 cut(s) 1204
PctI GAATGC 2 cut(s) 696, 780
PdmI GAANNNNTTC 2 cut(s) 471, 1263
PkrI GCNGC 2 cut(s) 755, 1020
PleI GAGTC 6 cut(s) 199, 685, 852, 862, 1054, 1255
PpsI GAGTC 6 cut(s) 199, 685, 852, 862, 1054, 1255
Ppu21I YACGTR 2 cut(s) 823, 1392
PsiI TTATAA 2 cut(s) 417, 1232
Psp6I CCWGG 1 cut(s) 922
PspFI CCCAGC 1 cut(s) 739
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 3 cut(s) 559, 1014, 1136
PspPI GGNCC 3 cut(s) 716, 769, 1135
PsuI RGATCY 3 cut(s) 84, 258, 538
RsaI GTAC 2 cut(s) 483, 1107
RsaNI GTAC 2 cut(s) 482, 1106
RseI CAYNNNNRTG 1 cut(s) 729
SaqAI TTAA 5 cut(s) 291, 387, 597, 849, 1311
SatI GCNGC 2 cut(s) 754, 1019
Sau96I GGNCC 3 cut(s) 716, 769, 1135
SchI GAGTC 6 cut(s) 199, 686, 853, 863, 1054, 1256
ScrFI CCNGG 1 cut(s) 924
SduI GDGCHC 1 cut(s) 1015
SfaNI GCATC 1 cut(s) 574
SfuI TTCGAA 1 cut(s) 529
SinI GGWCC 2 cut(s) 769, 1135
SmiMI CAYNNNNRTG 1 cut(s) 729
SmlI CTYRAG 2 cut(s) 94, 596
SmoI CTYRAG 2 cut(s) 94, 596
SpeI ACTAGT 1 cut(s) 1381
Sse9I AATT 4 cut(s) 250, 327, 549, 1139
SsiI CCGC 4 cut(s) 181, 377, 524, 1016
SspMI CTAG 7 cut(s) 77, 297, 506, 581, 750, 1022, 1382
StyD4I CCNGG 1 cut(s) 922
StyI CCWWGG 2 cut(s) 785, 934
TaiI ACGT 4 cut(s) 738, 825, 1029, 1394
TasI AATT 4 cut(s) 250, 327, 549, 1139
Tru1I TTAA 5 cut(s) 291, 387, 597, 849, 1311
Tru9I TTAA 5 cut(s) 291, 387, 597, 849, 1311
TseI GCWGC 2 cut(s) 753, 1018
TspDTI ATGAA 3 cut(s) 719, 961, 1147
TspGWI ACGGA 1 cut(s) 361
Vha464I CTTAAG 1 cut(s) 596
VpaK11BI GGWCC 2 cut(s) 769, 1135
XbaI TCTAGA 1 cut(s) 580
XmiI GTMKAC 1 cut(s) 819
XmnI GAANNNNTTC 2 cut(s) 471, 1263
XspI CTAG 7 cut(s) 77, 297, 506, 581, 750, 1022, 1382
ZraI GACGTC 1 cut(s) 736
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.