FvH4_3g37270

UDP-glycosyltransferase 76E2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
31966392 .. 31968386
1995 bp
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UTR
Exon/CDS
Intron
FvH4_3g37270.t1

Sequence Viewer

Length: 1359 bp
ATGGAGATGCAAAAGAGTACCCCGAGAGCTCAAAGATTGGTTTTAGTTCCATGTCCATGCCAAGGTCACATAAACCCGATGCTTCAGTTCGGTACGTTTCTTCACTCGAAGGGATTTTCCATTACCATCGTTCACACCCAGTTCAACTCTCCCAGCCCTTGCAACCACCCTGAGTTCACCTTCATTCCGATTCCTGATGGCCTAACTGTTCCTCTAGCCACATCTGGGAATATAATAGCTATTCTCTTGGCTATCAATGCATTTTGCAAAGCGAGTTTGGAACATTGTTTGACTACTCAAGTAATGAAACAAGAGCCGGAGAAGAAGATCACCTGCATCATCTACGACGAATTCATGTTCTTCTCTGCAGCTGCTGCTAATCATCTAAACATCCCAAGCATCATCCTTCGTACTACCAGTGCGGCCAATTTTCTTGCTCGTATCACTGTCATAGAACTTCATTCGAAAGGCCTCATTCCCTTCCCAGATTCTGTGTCATTCGACCTGGTGCCTCAAATCCATCCCATCAGATTCAAGGATCTGCCCATCTCACCCTGGGACACTATAGAAAAGTTTATGGAACTAATAATTGACGTGCATGATGTTAAGATATCTTCAGCCATCATTTGTAATACCACAGTCTGCCTTGACGAATCATCACTAGCATGGATCCAAAAACATAGCCGAGCACGGATTTTCTGCATGGGCCCTCTTCACAAAATCACAACAGCCGCCTCTAGAACACTTGAAGAGGACACAAGCTGCATTGAGTGGCTTGACAAGCAATCTCACAAATCAGTTATCTATGTCAGTTTGGGGAGTATAGCATCCATTGGTGAGAATGAACTAGCAGAAATGGCTTGGGGATTAGCTAACAGCAAGCAACCTTTCTTGTGGGTAATCAGACCTGGTTCCATTACCGACTCAGATTGGATAGAGCTGTTGCCTCAAGAGTTTAGAGAAGCTTTTGGAGAAAGAGGTTTCATAGTGAAATGGGCACCCCAAAGGGAAGTTTTGGCTCATGGCGCTGTGGGGGCGTTTTGGACTCATTGTGGCTGGAACTCAACTCTTGAAAGCATATCTGAAGGGGTTCCGATGATTTGCAAACCGTGTTTTAGTGATCAGAAGGTGCATGCAAGGCATGTGAGCAAAGTGTGGAAACTAGGTATAGAATTGGGAGATGAGTTTGAGAGGCGAGAGATAGAGAGAGCTGTTAGGAAAGTTTTGGTGGATAACGATGGGGAGGAAATCAGGGTGAGGGCCAAAGATATGAAGGAGAAAATACAAGTTTCTATGAGCAAGGGTGGATCTACCTACAATATCGTGAATGAGCTTGTTGAACTCATCATGGGATTCTAA

Protein Analysis

453

Amino Acids

50.72

Weight (kDa)

6.16

Isoelectric Point (pI)

40.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 261 - 412 1.4e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 341
Acc36I ACCTGC 1 cut(s) 341
AccB1I GGYRCC 2 cut(s) 508, 997
AciI CCGC 2 cut(s) 422, 732
AclWI GGATC 4 cut(s) 546, 664, 677, 1315
AcoI YGGCCR 1 cut(s) 423
AcsI RAATTY 1 cut(s) 350
AcuI CTGAAG 3 cut(s) 68, 600, 1104
AfaI GTAC 3 cut(s) 19, 94, 412
AfiI CCNNNNNNNGG 2 cut(s) 62, 225
AgsI TTSAA 5 cut(s) 145, 535, 749, 1073, 1340
AjiI CACGTC 1 cut(s) 595
AjnI CCWGG 3 cut(s) 504, 554, 907
AluBI AGCT 9 cut(s) 29, 239, 371, 762, 872, 940, 965, 1211, 1333
AluI AGCT 9 cut(s) 29, 239, 371, 762, 872, 940, 965, 1211, 1333
Alw21I GWGCWC 2 cut(s) 31, 691
AlwI GGATC 4 cut(s) 546, 664, 677, 1315
AlwNI CAGNNNCTG 2 cut(s) 374, 491
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 5 cut(s) 199, 423, 469, 706, 1260
ApaI GGGCCC 1 cut(s) 710
ApeKI GCWGC 4 cut(s) 368, 371, 374, 762
ApoI RAATTY 1 cut(s) 350
Asp700I GAANNNNTTC 1 cut(s) 1089
AspLEI GCGC 1 cut(s) 1028
AspS9I GGNCC 3 cut(s) 706, 707, 1260
AsuHPI GGTGA 5 cut(s) 169, 322, 543, 848, 1267
AsuII TTCGAA 1 cut(s) 464
AvaI CYCGRG 1 cut(s) 22
BaeGI GKGCMC 2 cut(s) 710, 1000
BamHI GGATCC 1 cut(s) 669
BanI GGYRCC 2 cut(s) 508, 997
BanII GRGCYC 2 cut(s) 31, 710
Bbv12I GWGCWC 2 cut(s) 31, 691
BbvI GCAGC 4 cut(s) 358, 361, 380, 749
BccI CCATC 7 cut(s) 134, 191, 528, 533, 554, 629, 1232
BciT130I CCWGG 3 cut(s) 506, 556, 909
BclI TGATCA 1 cut(s) 1120
BfaI CTAG 5 cut(s) 215, 662, 738, 848, 1163
BfmI CTRYAG 2 cut(s) 366, 564
BfoI RGCGCY 1 cut(s) 1029
BfuAI ACCTGC 1 cut(s) 341
BisI GCNGC 6 cut(s) 369, 372, 375, 423, 732, 763
BlsI GCNGC 6 cut(s) 370, 373, 376, 424, 733, 764
Bme1390I CCNGG 3 cut(s) 506, 556, 909
BmeT110I CYCGRG 1 cut(s) 22
BmgBI CACGTC 1 cut(s) 595
BmgT120I GGNCC 3 cut(s) 706, 707, 1260
BmiI GGNNCC 6 cut(s) 510, 671, 708, 913, 999, 1092
BmrFI CCNGG 3 cut(s) 506, 556, 909
BmrI ACTGGG 1 cut(s) 133
BmsI GCATC 4 cut(s) 69, 345, 408, 836
BmuI ACTGGG 1 cut(s) 133
Bpu14I TTCGAA 1 cut(s) 464
BpuEI CTTGAG 2 cut(s) 282, 933
BsaJI CCNNGG 3 cut(s) 61, 554, 555
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 225
Bse1I ACTGG 2 cut(s) 139, 417
BseBI CCWGG 3 cut(s) 506, 556, 909
BseDI CCNNGG 3 cut(s) 61, 554, 555
BseGI GGATG 4 cut(s) 390, 402, 520, 827
BseLI CCNNNNNNNGG 2 cut(s) 62, 225
BseMII CTCAG 2 cut(s) 162, 939
BseNI ACTGG 2 cut(s) 139, 417
BseSI GKGCMC 2 cut(s) 710, 1000
BseXI GCAGC 4 cut(s) 358, 361, 380, 749
BseYI CCCAGC 1 cut(s) 152
BshFI GGCC 5 cut(s) 201, 425, 471, 708, 1262
BshNI GGYRCC 2 cut(s) 508, 997
BsiHKAI GWGCWC 2 cut(s) 31, 691
BsiHKCI CYCGRG 1 cut(s) 22
BsiSI CCGG 1 cut(s) 317
BslFI GGGAC 1 cut(s) 572
BslI CCNNNNNNNGG 2 cut(s) 62, 225
BsmFI GGGAC 1 cut(s) 572
BsnI GGCC 5 cut(s) 201, 425, 471, 708, 1262
BsoBI CYCGRG 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 464
Bsp120I GGGCCC 1 cut(s) 706
Bsp1286I GDGCHC 4 cut(s) 31, 691, 710, 1000
Bsp143I GATC 5 cut(s) 327, 538, 669, 1120, 1307
BspACI CCGC 2 cut(s) 422, 732
BspANI GGCC 5 cut(s) 201, 425, 471, 708, 1262
BspCNI CTCAG 2 cut(s) 163, 938
BspLI GGNNCC 6 cut(s) 510, 671, 708, 913, 999, 1092
BspMAI CTGCAG 1 cut(s) 370
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 4 cut(s) 546, 664, 677, 1315
BspT104I TTCGAA 1 cut(s) 464
BspT107I GGYRCC 2 cut(s) 508, 997
BsrI ACTGG 2 cut(s) 139, 417
BssECI CCNNGG 3 cut(s) 61, 554, 555
BssMI GATC 5 cut(s) 327, 538, 669, 1120, 1307
BssT1I CCWWGG 1 cut(s) 61
Bst2UI CCWGG 3 cut(s) 506, 556, 909
Bst4CI ACNGT 4 cut(s) 208, 448, 640, 1110
Bst6I CTCTTC 2 cut(s) 717, 744
BstAPI GCANNNNNTGC 1 cut(s) 374
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 2 cut(s) 881, 1134
BstDEI CTNAG 2 cut(s) 171, 925
BstF5I GGATG 4 cut(s) 390, 402, 520, 827
BstH2I RGCGCY 1 cut(s) 1029
BstHHI GCGC 1 cut(s) 1028
BstKTI GATC 5 cut(s) 330, 541, 672, 1123, 1310
BstMBI GATC 5 cut(s) 327, 538, 669, 1120, 1307
BstMWI GCNNNNNNNGC 7 cut(s) 257, 374, 781, 857, 1025, 1034, 1138
BstNI CCWGG 3 cut(s) 506, 556, 909
BstNSI RCATGY 2 cut(s) 1136, 1145
BstSCI CCNGG 3 cut(s) 504, 554, 907
BstSFI CTRYAG 2 cut(s) 366, 564
BstSLI GKGCMC 2 cut(s) 710, 1000
BstV1I GCAGC 4 cut(s) 358, 361, 380, 749
BstX2I RGATCY 3 cut(s) 538, 669, 1307
BstYI RGATCY 3 cut(s) 538, 669, 1307
BsuRI GGCC 5 cut(s) 201, 425, 471, 708, 1262
BtrI CACGTC 1 cut(s) 595
BtsCI GGATG 4 cut(s) 390, 402, 520, 827
BtsIMutI CAGTG 2 cut(s) 424, 444
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 2 cut(s) 881, 1134
CaiI CAGNNNCTG 2 cut(s) 374, 491
CfoI GCGC 1 cut(s) 1028
Cfr13I GGNCC 3 cut(s) 706, 707, 1260
CsiI ACCWGGT 2 cut(s) 504, 907
Csp6I GTAC 3 cut(s) 18, 93, 411
CviQI GTAC 3 cut(s) 18, 93, 411
DdeI CTNAG 2 cut(s) 171, 925
DpnI GATC 5 cut(s) 329, 540, 671, 1122, 1309
DpnII GATC 5 cut(s) 327, 538, 669, 1120, 1307
EaeI YGGCCR 1 cut(s) 423
Eam1104I CTCTTC 2 cut(s) 717, 744
EarI CTCTTC 2 cut(s) 717, 744
Ecl136II GAGCTC 1 cut(s) 29
Eco130I CCWWGG 1 cut(s) 61
Eco147I AGGCCT 1 cut(s) 471
Eco24I GRGCYC 2 cut(s) 31, 710
Eco32I GATATC 1 cut(s) 612
Eco53kI GAGCTC 1 cut(s) 29
Eco57I CTGAAG 3 cut(s) 68, 600, 1104
Eco88I CYCGRG 1 cut(s) 22
EcoICRI GAGCTC 1 cut(s) 29
EcoO109I RGGNCCY 1 cut(s) 707
EcoRI GAATTC 1 cut(s) 350
EcoRII CCWGG 3 cut(s) 504, 554, 907
EcoRV GATATC 1 cut(s) 612
EcoT14I CCWWGG 1 cut(s) 61
EcoT22I ATGCAT 1 cut(s) 262
EcoT38I GRGCYC 2 cut(s) 31, 710
ErhI CCWWGG 1 cut(s) 61
FaqI GGGAC 1 cut(s) 572
FbaI TGATCA 1 cut(s) 1120
Fnu4HI GCNGC 6 cut(s) 369, 372, 375, 423, 732, 763
FokI GGATG 4 cut(s) 377, 389, 507, 814
FriOI GRGCYC 2 cut(s) 31, 710
Fsp4HI GCNGC 6 cut(s) 369, 372, 375, 423, 732, 763
FspBI CTAG 5 cut(s) 215, 662, 738, 848, 1163
GlaI GCGC 1 cut(s) 1027
GluI GCNGC 6 cut(s) 369, 372, 375, 423, 732, 763
GsaI CCCAGC 1 cut(s) 156
HaeII RGCGCY 1 cut(s) 1029
HaeIII GGCC 5 cut(s) 201, 425, 471, 708, 1262
HapII CCGG 1 cut(s) 317
HhaI GCGC 1 cut(s) 1028
Hin6I GCGC 1 cut(s) 1026
HinP1I GCGC 1 cut(s) 1026
HindIII AAGCTT 1 cut(s) 963
HinfI GANTC 7 cut(s) 190, 488, 531, 653, 923, 1045, 1353
HpaII CCGG 1 cut(s) 317
HphI GGTGA 5 cut(s) 169, 322, 543, 848, 1267
Hpy166II GTNNAC 2 cut(s) 133, 177
Hpy188I TCNGA 7 cut(s) 189, 530, 905, 928, 1084, 1095, 1125
Hpy188III TCNNGA 5 cut(s) 194, 738, 950, 1070, 1324
Hpy8I GTNNAC 2 cut(s) 133, 177
Hpy99I CGWCG 1 cut(s) 350
HpyAV CCTTC 7 cut(s) 103, 190, 416, 490, 1079, 1120, 1267
HpyCH4III ACNGT 4 cut(s) 208, 448, 640, 1110
HpyCH4IV ACGT 2 cut(s) 95, 594
HpyF10VI GCNNNNNNNGC 7 cut(s) 257, 374, 781, 857, 1025, 1034, 1138
HpyF3I CTNAG 2 cut(s) 171, 925
HpySE526I ACGT 2 cut(s) 95, 594
HspAI GCGC 1 cut(s) 1026
Ksp22I TGATCA 1 cut(s) 1120
Kzo9I GATC 5 cut(s) 327, 538, 669, 1120, 1307
Lsp1109I GCAGC 4 cut(s) 358, 361, 380, 749
LweI GCATC 4 cut(s) 69, 345, 408, 836
MabI ACCWGGT 2 cut(s) 504, 907
MaeI CTAG 5 cut(s) 215, 662, 738, 848, 1163
MaeII ACGT 2 cut(s) 95, 594
MaeIII GTNAC 1 cut(s) 65
MalI GATC 5 cut(s) 329, 540, 671, 1122, 1309
MboI GATC 5 cut(s) 327, 538, 669, 1120, 1307
MboII GAAGA 7 cut(s) 92, 334, 337, 352, 606, 704, 761
MflI RGATCY 3 cut(s) 538, 669, 1307
MhlI GDGCHC 4 cut(s) 31, 691, 710, 1000
MluCI AATT 4 cut(s) 350, 427, 588, 1172
MlyI GAGTC 2 cut(s) 917, 1039
Mph1103I ATGCAT 1 cut(s) 262
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 1 cut(s) 606
MslI CAYNNNNRTG 2 cut(s) 55, 664
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 1 cut(s) 317
MspR9I CCNGG 3 cut(s) 506, 556, 909
MvaI CCWGG 3 cut(s) 506, 556, 909
MwoI GCNNNNNNNGC 7 cut(s) 257, 374, 781, 857, 1025, 1034, 1138
NdeII GATC 5 cut(s) 327, 538, 669, 1120, 1307
NlaIV GGNNCC 6 cut(s) 510, 671, 708, 913, 999, 1092
NmeAIII GCCGAG 1 cut(s) 710
NmuCI GTSAC 1 cut(s) 65
NsiI ATGCAT 1 cut(s) 262
NspI RCATGY 2 cut(s) 1136, 1145
NspV TTCGAA 1 cut(s) 464
PaeI GCATGC 1 cut(s) 1136
PaqCI CACCTGC 1 cut(s) 341
PasI CCCWGGG 1 cut(s) 555
PceI AGGCCT 1 cut(s) 471
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 5 cut(s) 190, 488, 531, 653, 1353
PkrI GCNGC 6 cut(s) 370, 373, 376, 424, 733, 764
PleI GAGTC 2 cut(s) 917, 1039
PpsI GAGTC 2 cut(s) 917, 1039
Psp124BI GAGCTC 1 cut(s) 31
Psp6I CCWGG 3 cut(s) 504, 554, 907
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 3 cut(s) 504, 554, 907
PspN4I GGNNCC 6 cut(s) 510, 671, 708, 913, 999, 1092
PspOMI GGGCCC 1 cut(s) 706
PspPI GGNCC 3 cut(s) 706, 707, 1260
PstI CTGCAG 1 cut(s) 370
PstNI CAGNNNCTG 2 cut(s) 374, 491
PsuI RGATCY 3 cut(s) 538, 669, 1307
PvuII CAGCTG 1 cut(s) 371
RsaI GTAC 3 cut(s) 19, 94, 412
RsaNI GTAC 3 cut(s) 18, 93, 411
RseI CAYNNNNRTG 2 cut(s) 55, 664
SacI GAGCTC 1 cut(s) 31
SaqAI TTAA 1 cut(s) 606
SatI GCNGC 6 cut(s) 369, 372, 375, 423, 732, 763
Sau3AI GATC 5 cut(s) 327, 538, 669, 1120, 1307
Sau96I GGNCC 3 cut(s) 706, 707, 1260
SchI GAGTC 2 cut(s) 917, 1039
ScrFI CCNGG 3 cut(s) 506, 556, 909
SduI GDGCHC 4 cut(s) 31, 691, 710, 1000
SexAI ACCWGGT 2 cut(s) 504, 907
SfaNI GCATC 4 cut(s) 69, 345, 408, 836
SfcI CTRYAG 2 cut(s) 366, 564
SfuI TTCGAA 1 cut(s) 464
SmiMI CAYNNNNRTG 2 cut(s) 55, 664
SmlI CTYRAG 2 cut(s) 297, 948
SmoI CTYRAG 2 cut(s) 297, 948
SphI GCATGC 1 cut(s) 1136
Sse9I AATT 4 cut(s) 350, 427, 588, 1172
SseBI AGGCCT 1 cut(s) 471
SsiI CCGC 2 cut(s) 422, 732
SspMI CTAG 5 cut(s) 215, 662, 738, 848, 1163
SstI GAGCTC 1 cut(s) 31
StuI AGGCCT 1 cut(s) 471
StyD4I CCNGG 3 cut(s) 504, 554, 907
StyI CCWWGG 1 cut(s) 61
TaaI ACNGT 4 cut(s) 208, 448, 640, 1110
TaiI ACGT 2 cut(s) 98, 597
TaqI TCGA 3 cut(s) 107, 464, 501
TasI AATT 4 cut(s) 350, 427, 588, 1172
TauI GCSGC 2 cut(s) 425, 734
TfiI GAWTC 5 cut(s) 190, 488, 531, 653, 1353
Tru1I TTAA 1 cut(s) 606
Tru9I TTAA 1 cut(s) 606
TscAI CASTG 2 cut(s) 424, 451
TseFI GTSAC 1 cut(s) 65
TseI GCWGC 4 cut(s) 368, 371, 374, 762
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 7 cut(s) 172, 320, 343, 449, 858, 973, 1286
TspGWI ACGGA 1 cut(s) 706
TspRI CASTG 2 cut(s) 424, 451
XapI RAATTY 1 cut(s) 350
XbaI TCTAGA 1 cut(s) 737
XceI RCATGY 2 cut(s) 1136, 1145
XmnI GAANNNNTTC 1 cut(s) 1089
XspI CTAG 5 cut(s) 215, 662, 738, 848, 1163
Zsp2I ATGCAT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.