AT5G38010

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
15158197 .. 15160314
2118 bp
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UTR
Exon/CDS
Intron
AT5G38010.1

Sequence Viewer

Length: 1362 bp
ATGGAGGAAAAGCAAGAGAGGAGGAGAAGGATCGTGTTGATTCCCGCTCCAGCACAAGGACACATATCTCCGATGATGCAACTTGCAAGAGCCCTTCACTTAAAGGGCTTCTCCATTACAGTTGCTCAAACCAAGTTCAATTACTTGAAGCCTTCAAAAGACTTAGCTGATTTTCAGTTTATCACCATCCCAGAGAGCTTACCAGCCTCGGATCTTAAGAATCTAGGACCAGTTTGGTTTCTTCTTAAACTCAATAAAGAGTGTGAGTTTAGCTTCAAGGAGTGTTTAGGTCAATTGTTGCTGCAAAAACAACTTATACCGGAAGAAGAGATCGCTTGTGTCATCTACGACGAGTTCATGTACTTTGCTGAAGCTGCAGCCAAAGAGTTTAACCTTCCCAAAGTTATTTTCAGTACCGAAAATGCGACGGCTTTTGCTTGTCGCTCTGCCATGTGCAAACTCTATGCAAAAGATGGTTTGGCTCCCCTTAAAGAAGGATGTGGGCGAGAAGAGGAGCTAGTGCCAAAGTTGCATCCCCTTAGATACAAAGACCTACCAACTTCAGCATTTGCACCAGTAGAAGCCTCAGTGGAAGTGTTTAAAAGTTCATGTGATAAAGGGACAGCTTCCGCTATGATAATCAACACAGTGAGGTGTCTAGAGATATCATCCTTGGAGTGGCTTCAACAAGAACTTAAGATTCCGATATATCCTATAGGCCCTCTTCACATGGTTTCTTCAGCTCCTCCTACGAGTCTACTAGACGAGAATGAGAGTTGCATTGATTGGCTGAACAAACAAAAGCCGAGCTCGGTGATTTACATAAGTTTGGGAAGCTTTACTTTGTTGGAAACTAAAGAAGTGTTGGAAATGGCTTCGGGCTTGGTTAGTAGTAACCAACACTTCTTGTGGGTGATTCGACCCGGGTCCATACTTGGTTCTGAATTGACTAATGAGGAATTATTGAGTATGATGGAAATACCGGATCGAGGCTACATTGTGAAATGGGCTCCACAAAAGCAAGTGCTTGCACATTCTGCGGTTGGAGCATTTTGGAGTCATTGTGGATGGAACTCGACTCTAGAGAGCATGGGTGAAGGAGTTCCGATGATTTGTAGGCCTTTTACTACTGATCAAAAGGTAAATGCGCGGTATGTGGAGTGTGTCTGGAGAGTTGGGGTTCAAGTGGAGGGTGAACTAAAGAGAGGAGTAGTCGAGAGAGCTGTGAAGAGGTTACTGGTGGATGAAGAAGGAGAAGAGATGAAGTTGAGAGCTCTCAGTTTGAAAGAGAAACTCAAAGTTTCTGTTCTACCGGGAGGTTCTTCACACAGTTCACTAGATGACTTAATCAAGACTCTATGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

453

Amino Acids

50.71

Weight (kDa)

5.89

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 270 - 423 1.3e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 47
AccI GTMKAC 1 cut(s) 757
AccII CGCG 1 cut(s) 1150
AciI CCGC 4 cut(s) 45, 630, 1040, 1150
AclWI GGATC 3 cut(s) 38, 219, 993
AcuI CTGAAG 3 cut(s) 390, 546, 723
AfaI GTAC 2 cut(s) 362, 415
AfiI CCNNNNNNNGG 3 cut(s) 56, 678, 989
AflII CTTAAG 2 cut(s) 215, 695
AgsI TTSAA 7 cut(s) 139, 148, 156, 277, 686, 1184, 1285
AjuI GAANNNNNNNTTGG 2 cut(s) 392, 424
Alw21I GWGCWC 2 cut(s) 812, 1276
AlwI GGATC 3 cut(s) 38, 219, 993
Ama87I CYCGRG 1 cut(s) 923
AoxI GGCC 2 cut(s) 718, 1118
ApeKI GCWGC 3 cut(s) 301, 374, 377
Asp700I GAANNNNTTC 1 cut(s) 1101
AspLEI GCGC 1 cut(s) 1150
AspS9I GGNCC 3 cut(s) 227, 719, 927
AsuC2I CCSGG 3 cut(s) 924, 925, 1314
AsuHPI GGTGA 5 cut(s) 175, 826, 925, 1106, 1205
AvaI CYCGRG 1 cut(s) 923
AvaII GGWCC 2 cut(s) 227, 927
BanII GRGCYC 4 cut(s) 94, 812, 1012, 1276
Bbv12I GWGCWC 2 cut(s) 812, 1276
BbvI GCAGC 3 cut(s) 288, 361, 389
BccI CCATC 4 cut(s) 194, 467, 967, 1062
BceAI ACGGC 1 cut(s) 444
BclI TGATCA 1 cut(s) 1132
BcnI CCSGG 3 cut(s) 924, 925, 1314
BfaI CTAG 6 cut(s) 224, 518, 659, 761, 1082, 1337
BfmI CTRYAG 2 cut(s) 375, 714
BfrI CTTAAG 2 cut(s) 215, 695
BisI GCNGC 3 cut(s) 302, 375, 378
BlsI GCNGC 3 cut(s) 303, 376, 379
Bme1390I CCNGG 3 cut(s) 924, 925, 1314
Bme18I GGWCC 2 cut(s) 227, 927
BmeT110I CYCGRG 1 cut(s) 923
BmgT120I GGNCC 3 cut(s) 227, 719, 927
BmiI GGNNCC 3 cut(s) 483, 928, 1011
BmrFI CCNGG 3 cut(s) 924, 925, 1314
BmsI GCATC 2 cut(s) 66, 541
BoxI GACNNNNGTC 1 cut(s) 925
BpmI CTGGAG 2 cut(s) 33, 1189
BpuMI CCSGG 3 cut(s) 924, 925, 1314
BsaJI CCNNGG 3 cut(s) 207, 672, 923
BsaWI WCCGGW 2 cut(s) 319, 982
BsaXI ACNNNNNCTCC 2 cut(s) 1048, 1078
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 678, 989
Bse1I ACTGG 3 cut(s) 230, 575, 1242
BseDI CCNNGG 3 cut(s) 207, 672, 923
BseGI GGATG 6 cut(s) 186, 503, 532, 668, 1073, 1249
BseLI CCNNNNNNNGG 3 cut(s) 56, 678, 989
BseMII CTCAG 2 cut(s) 600, 1291
BseNI ACTGG 3 cut(s) 230, 575, 1242
BseRI GAGGAG 5 cut(s) 34, 37, 527, 735, 1221
BseXI GCAGC 3 cut(s) 288, 361, 389
Bsh1236I CGCG 1 cut(s) 1150
BshFI GGCC 2 cut(s) 720, 1120
BsiHKAI GWGCWC 2 cut(s) 812, 1276
BsiHKCI CYCGRG 1 cut(s) 923
BsiSI CCGG 4 cut(s) 320, 924, 983, 1313
BslFI GGGAC 1 cut(s) 634
BslI CCNNNNNNNGG 3 cut(s) 56, 678, 989
BsmFI GGGAC 1 cut(s) 634
BsnI GGCC 2 cut(s) 720, 1120
BsoBI CYCGRG 1 cut(s) 923
Bsp1286I GDGCHC 4 cut(s) 94, 812, 1012, 1276
Bsp143I GATC 5 cut(s) 30, 211, 330, 985, 1132
BspACI CCGC 4 cut(s) 45, 630, 1040, 1150
BspANI GGCC 2 cut(s) 720, 1120
BspCNI CTCAG 2 cut(s) 599, 1290
BspFNI CGCG 1 cut(s) 1150
BspLI GGNNCC 3 cut(s) 483, 928, 1011
BspMAI CTGCAG 1 cut(s) 379
BspPI GGATC 3 cut(s) 38, 219, 993
BspTI CTTAAG 2 cut(s) 215, 695
BsrBI CCGCTC 1 cut(s) 47
BsrI ACTGG 3 cut(s) 230, 575, 1242
BssECI CCNNGG 3 cut(s) 207, 672, 923
BssMI GATC 5 cut(s) 30, 211, 330, 985, 1132
BssT1I CCWWGG 1 cut(s) 672
Bst4CI ACNGT 3 cut(s) 121, 649, 1331
Bst6I CTCTTC 5 cut(s) 321, 504, 729, 1223, 1251
BstAFI CTTAAG 2 cut(s) 215, 695
BstAPI GCANNNNNTGC 1 cut(s) 1037
BstC8I GCNNGC 1 cut(s) 1029
BstDEI CTNAG 4 cut(s) 163, 539, 586, 1277
BstF5I GGATG 6 cut(s) 186, 503, 532, 668, 1073, 1249
BstFNI CGCG 1 cut(s) 1150
BstHHI GCGC 1 cut(s) 1150
BstKTI GATC 5 cut(s) 33, 214, 333, 988, 1135
BstMBI GATC 5 cut(s) 30, 211, 330, 985, 1132
BstMWI GCNNNNNNNGC 4 cut(s) 374, 529, 1037, 1046
BstPAI GACNNNNGTC 1 cut(s) 925
BstSCI CCNGG 3 cut(s) 922, 923, 1312
BstSFI CTRYAG 2 cut(s) 375, 714
BstUI CGCG 1 cut(s) 1150
BstV1I GCAGC 3 cut(s) 288, 361, 389
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BsuRI GGCC 2 cut(s) 720, 1120
BtsCI GGATG 6 cut(s) 186, 503, 532, 668, 1073, 1249
BtsIMutI CAGTG 2 cut(s) 594, 654
Cac8I GCNNGC 1 cut(s) 1029
CfoI GCGC 1 cut(s) 1150
Cfr13I GGNCC 3 cut(s) 227, 719, 927
Cfr9I CCCGGG 1 cut(s) 923
Csp6I GTAC 2 cut(s) 361, 414
CviAII CATG 5 cut(s) 358, 451, 609, 730, 1090
CviQI GTAC 2 cut(s) 361, 414
DdeI CTNAG 4 cut(s) 163, 539, 586, 1277
DpnI GATC 5 cut(s) 32, 213, 332, 987, 1134
DpnII GATC 5 cut(s) 30, 211, 330, 985, 1132
DraI TTTAAA 1 cut(s) 601
Eam1104I CTCTTC 5 cut(s) 321, 504, 729, 1223, 1251
EarI CTCTTC 5 cut(s) 321, 504, 729, 1223, 1251
Ecl136II GAGCTC 2 cut(s) 810, 1274
Eco130I CCWWGG 1 cut(s) 672
Eco147I AGGCCT 1 cut(s) 1120
Eco24I GRGCYC 4 cut(s) 94, 812, 1012, 1276
Eco32I GATATC 1 cut(s) 666
Eco47I GGWCC 2 cut(s) 227, 927
Eco53kI GAGCTC 2 cut(s) 810, 1274
Eco57I CTGAAG 3 cut(s) 390, 546, 723
Eco88I CYCGRG 1 cut(s) 923
EcoICRI GAGCTC 2 cut(s) 810, 1274
EcoO109I RGGNCCY 1 cut(s) 719
EcoRV GATATC 1 cut(s) 666
EcoT14I CCWWGG 1 cut(s) 672
EcoT38I GRGCYC 4 cut(s) 94, 812, 1012, 1276
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 5 cut(s) 361, 454, 612, 733, 1093
FalI AAGNNNNNCTT 2 cut(s) 826, 858
FaqI GGGAC 1 cut(s) 634
FatI CATG 5 cut(s) 357, 450, 608, 729, 1089
FauI CCCGC 1 cut(s) 52
FbaI TGATCA 1 cut(s) 1132
FblI GTMKAC 1 cut(s) 757
Fnu4HI GCNGC 3 cut(s) 302, 375, 378
FokI GGATG 6 cut(s) 173, 510, 519, 655, 1080, 1256
FriOI GRGCYC 4 cut(s) 94, 812, 1012, 1276
Fsp4HI GCNGC 3 cut(s) 302, 375, 378
FspBI CTAG 6 cut(s) 224, 518, 659, 761, 1082, 1337
GlaI GCGC 1 cut(s) 1149
GluI GCNGC 3 cut(s) 302, 375, 378
GsuI CTGGAG 2 cut(s) 33, 1189
HaeIII GGCC 2 cut(s) 720, 1120
HapII CCGG 4 cut(s) 320, 924, 983, 1313
HhaI GCGC 1 cut(s) 1150
Hin1II CATG 5 cut(s) 361, 454, 612, 733, 1093
Hin6I GCGC 1 cut(s) 1148
HinP1I GCGC 1 cut(s) 1148
HindIII AAGCTT 1 cut(s) 835
HinfI GANTC 8 cut(s) 40, 220, 700, 754, 916, 1057, 1078, 1354
HpaII CCGG 4 cut(s) 320, 924, 983, 1313
HphI GGTGA 5 cut(s) 175, 826, 925, 1106, 1205
Hpy166II GTNNAC 3 cut(s) 758, 1196, 1334
Hpy188I TCNGA 5 cut(s) 72, 211, 705, 943, 1107
Hpy188III TCNNGA 5 cut(s) 659, 1082, 1168, 1216, 1351
Hpy8I GTNNAC 3 cut(s) 758, 1196, 1334
Hpy99I CGWCG 2 cut(s) 353, 430
HpyAV CCTTC 7 cut(s) 21, 104, 162, 404, 488, 1091, 1244
HpyCH4III ACNGT 3 cut(s) 121, 649, 1331
HpyF10VI GCNNNNNNNGC 4 cut(s) 374, 529, 1037, 1046
HpyF3I CTNAG 4 cut(s) 163, 539, 586, 1277
Hsp92II CATG 5 cut(s) 361, 454, 612, 733, 1093
HspAI GCGC 1 cut(s) 1148
Ksp22I TGATCA 1 cut(s) 1132
Kzo9I GATC 5 cut(s) 30, 211, 330, 985, 1132
LmnI GCTCC 6 cut(s) 52, 487, 514, 748, 1015, 1046
Lsp1109I GCAGC 3 cut(s) 288, 361, 389
LweI GCATC 2 cut(s) 66, 541
MaeI CTAG 6 cut(s) 224, 518, 659, 761, 1082, 1337
MaeIII GTNAC 2 cut(s) 893, 1233
MalI GATC 5 cut(s) 32, 213, 332, 987, 1134
MbiI CCGCTC 1 cut(s) 47
MboI GATC 5 cut(s) 30, 211, 330, 985, 1132
MfeI CAATTG 1 cut(s) 293
MflI RGATCY 1 cut(s) 211
MhlI GDGCHC 4 cut(s) 94, 812, 1012, 1276
MluCI AATT 4 cut(s) 139, 293, 944, 959
MlyI GAGTC 4 cut(s) 763, 1066, 1072, 1348
MmeI TCCRAC 3 cut(s) 828, 846, 1024
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 8 cut(s) 101, 216, 246, 390, 489, 600, 696, 1346
MspCI CTTAAG 2 cut(s) 215, 695
MspI CCGG 4 cut(s) 320, 924, 983, 1313
MspR9I CCNGG 3 cut(s) 924, 925, 1314
MunI CAATTG 1 cut(s) 293
MvnI CGCG 1 cut(s) 1150
MwoI GCNNNNNNNGC 4 cut(s) 374, 529, 1037, 1046
NciI CCSGG 3 cut(s) 924, 925, 1314
NdeII GATC 5 cut(s) 30, 211, 330, 985, 1132
NlaIII CATG 5 cut(s) 361, 454, 612, 733, 1093
NlaIV GGNNCC 3 cut(s) 483, 928, 1011
NmeAIII GCCGAG 1 cut(s) 831
PceI AGGCCT 1 cut(s) 1120
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 4 cut(s) 40, 220, 700, 916
PkrI GCNGC 3 cut(s) 303, 376, 379
PleI GAGTC 4 cut(s) 762, 1065, 1072, 1348
PpsI GAGTC 4 cut(s) 762, 1065, 1072, 1348
PshAI GACNNNNGTC 1 cut(s) 925
Psp124BI GAGCTC 2 cut(s) 812, 1276
PspN4I GGNNCC 3 cut(s) 483, 928, 1011
PspPI GGNCC 3 cut(s) 227, 719, 927
PstI CTGCAG 1 cut(s) 379
PsuI RGATCY 1 cut(s) 211
RsaI GTAC 2 cut(s) 362, 415
RsaNI GTAC 2 cut(s) 361, 414
SacI GAGCTC 2 cut(s) 812, 1276
SaqAI TTAA 8 cut(s) 101, 216, 246, 390, 489, 600, 696, 1346
SatI GCNGC 3 cut(s) 302, 375, 378
Sau3AI GATC 5 cut(s) 30, 211, 330, 985, 1132
Sau96I GGNCC 3 cut(s) 227, 719, 927
SchI GAGTC 4 cut(s) 763, 1066, 1072, 1348
ScrFI CCNGG 3 cut(s) 924, 925, 1314
SduI GDGCHC 4 cut(s) 94, 812, 1012, 1276
SfaNI GCATC 2 cut(s) 66, 541
SfcI CTRYAG 2 cut(s) 375, 714
SinI GGWCC 2 cut(s) 227, 927
SmaI CCCGGG 1 cut(s) 925
SmlI CTYRAG 2 cut(s) 215, 695
SmoI CTYRAG 2 cut(s) 215, 695
Sse9I AATT 4 cut(s) 139, 293, 944, 959
SseBI AGGCCT 1 cut(s) 1120
SsiI CCGC 4 cut(s) 45, 630, 1040, 1150
SspMI CTAG 6 cut(s) 224, 518, 659, 761, 1082, 1337
SstI GAGCTC 2 cut(s) 812, 1276
StuI AGGCCT 1 cut(s) 1120
StyD4I CCNGG 3 cut(s) 922, 923, 1312
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 3 cut(s) 121, 649, 1331
TaqI TCGA 4 cut(s) 919, 988, 1076, 1215
TasI AATT 4 cut(s) 139, 293, 944, 959
TatI WGTACW 1 cut(s) 360
TfiI GAWTC 4 cut(s) 40, 220, 700, 916
Tru1I TTAA 8 cut(s) 101, 216, 246, 390, 489, 600, 696, 1346
Tru9I TTAA 8 cut(s) 101, 216, 246, 390, 489, 600, 696, 1346
TscAI CASTG 2 cut(s) 594, 654
TseI GCWGC 3 cut(s) 301, 374, 377
TspDTI ATGAA 4 cut(s) 346, 597, 1260, 1277
TspMI CCCGGG 1 cut(s) 923
TspRI CASTG 2 cut(s) 594, 654
Vha464I CTTAAG 2 cut(s) 215, 695
VpaK11BI GGWCC 2 cut(s) 227, 927
XbaI TCTAGA 2 cut(s) 658, 1081
XmaI CCCGGG 1 cut(s) 923
XmiI GTMKAC 1 cut(s) 757
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 6 cut(s) 224, 518, 659, 761, 1082, 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.