Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000714

Physical Location & Seq

Genomic Coordinates Forward (+)

653120 .. 655026

Gene Structure 1907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G008000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGAAAAGAAATCACAGAGTGGTCAACTGTTGGTCTTAGTTCCATGCCCATACCAAGGCCACATAAACCCTATGCTTAAGCTGGGTACCTTCCTTCACTCAAAGGGCTTTTCCATTTCAATTGTTCACACCCATTTCAACTCTCCAAACCCTTCAAACCACCCCGAATTCACCTTCTTTCCAATACCAGATGGCTTAACTGCTGATGAGATTTCATCTGGGAATGTAGTAGCTATTGTGTTTGCTGTTAACGCCAATTGCAAAGCGAGTTTCAAACACTGCTTGACTGATAGAGTGACGGAACACGAACCGCAGAACAAAATCACCAGTATCATCTATGATGAACTTATGTACTTCTCTGAATCTGTGGCTAATGATCTAAACATTCCAAGAATCCTCTTACACACGCAAAGTGCAACCAATTTTATTGCTCGCAATGCTGTAATACGACTTCATTCGAAAGGTTGCACTCCCTTCCCAGAATCTATGTTAGCGAACTCGGTGGACGAGCTTCATCCCCTCCGGTTTAAGGATCTGCCCATTACCATTTTCGACACACTTGAAAACTATTCGAAACTATTGGCTATTGCCAACAATGTTAGGACATCCTCAGCCATCATTTGGAACACCCTGGACTGCCTTGAACAATCATCACTAGCAAAGGTCCAGCAACAATGTCAAGTTCCAATCTTCTCCATAGGTCCTCTTCACAAGATTGCAACAGTAGCCTCCAGTAGTTTACTAGAAGAAGACACAGGCTGTGTTGCGTGGCTTGACAAACAATCCCATAACTCAGTTATCTATGTAAGCTTGGGGAGTCTAGCATCCATCAGTGAGAAAGAACTAGCCGAAATGGCTTGGGGATTAATTAACAGCAGGCAACCTTTTTTGTGGGTGATTAGGCCCGGATCAATTTGTGGTTCTGATTGGATCGAGCTACTGCCTCAAGGTTTCCTAGAAGCTGTTGGAGAAAGAAGTTGCATCGTGAAATGGGCACCCCAGATGGAAGTCTTGGCACATGGCGCAGTGGGCGGGTTCTGGAGCCATTGTGGTTGGAACTCAACCCTGGAAAGTATATCTGAAGGCGTTCCGATGTTATGCAGGCCGTGCTTTAGTGATCAGAAGGTGAATGCAAGGTATGTAAGCGAAGTATGGAAAATAGGGATACAATTGGAGAATGAATTAGAGAGGGGAGAGATAGAGAGAGCTGTTAGGAAACTTCTGGTAGATGATGATGGGAAGGGAATGAGGGTGAGGGCCAAGGAGTTGAAGGAGAAAATAGAAGTTAGTATGAAGGGTGGCTCTACCGACCATTTCTTGAATGAGCTTGTGGAGGTTATAAAGTCATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047254 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204

Pfam Domains

Protein Families

UDPGT

Protein Analysis

451

Amino Acids

50.05

Weight (kDa)

5.86

Isoelectric Point (pI)

35.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26480 AT3G46650 AT3G46660 AT3G46670 AT3G46680 AT3G46690 AT3G46700 AT3G46720 AT5G05860 AT5G05870 AT5G37950 AT5G37950 AT5G38010 AT5G38040 AT5G59580 AT5G59590
fragaria_vesca	FvH4_3g37270 FvH4_3g37280 FvH4_3g37280 FvH4_3g37310
malus_domestica	MD00G1075200.v1.1 MD03G1081900.v1.1 MD03G1082100.v1.1 MD03G1082200.v1.1 MD03G1082400.v1.1 MD03G1082500.v1.1 MD11G1090200.v1.1 MD11G1090300.v1.1 MD11G1090500.v1.1
prunus_persica	Prupe.6G007700_v2.0.a1 Prupe.6G007700_v2.0.a1 Prupe.6G007800_v2.0.a1 Prupe.6G008000_v2.0.a1 Prupe.6G008200_v2.0.a1 Prupe.6G008300_v2.0.a1 Prupe.6G008400_v2.0.a1 Prupe.6G008600_v2.0.a1 Prupe.6G008700_v2.0.a1
pyrus_communis	pycom03g06530 pycom03g06540 pycom03g06550 pycom03g06570 pycom11g07520
rosa_chinensis	RchiOBHm_Chr4g0431001 RchiOBHm_Chr5g0067011 RchiOBHm_Chr5g0067091
rosa_laevigata	RLG00000035904 RLG00000035909 RLG00000035911
rosa_multiflora	Rmu_sc0000151.1_g000012 Rmu_sc0000151.1_g000013 Rmu_sc0006583.1_g000015
rosa_roxburghii	Rroxscaffold_1G00013980 Rroxscaffold_1G00014100
rosa_rugosa	Rorug05G0380800 Rorug05G0381400 Rorug05G0381600 Rorug05G0381700 Rorug05G0381700
rosa_samantha	Rh5AG440700 Rh5AG441400 Rh5BG457900 Rh5BG458600 Rh5BG458700 Rh5CG480800 Rh5CG480900 Rh5DG472900 Rh5DG473400 Rh5DG473600
rosa_wichuraiana	Rw4G026410 Rw5G041180 Rw5G041230 Rw5G041240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1340
Acc65I	GGTACC	1 cut(s)	86
AccB1I	GGYRCC	2 cut(s)	86, 994
AccB7I	CCANNNNNTGG	1 cut(s)	621
AciI	CCGC	2 cut(s)	311, 1032
AclWI	GGATC	3 cut(s)	540, 916, 938
AcsI	RAATTY	1 cut(s)	167
AcuI	CTGAAG	1 cut(s)	1101
AdeI	CACNNNGTG	1 cut(s)	20
AfaI	GTAC	2 cut(s)	88, 353
AfiI	CCNNNNNNNGG	3 cut(s)	56, 529, 621
AflII	CTTAAG	1 cut(s)	77
AgsI	TTSAA	8 cut(s)	120, 139, 156, 274, 563, 644, 1270, 1321
AjnI	CCWGG	2 cut(s)	630, 1065
AluBI	AGCT	8 cut(s)	82, 233, 511, 810, 937, 962, 1208, 1327
AluI	AGCT	8 cut(s)	82, 233, 511, 810, 937, 962, 1208, 1327
AlwI	GGATC	3 cut(s)	540, 916, 938
AoxI	GGCC	4 cut(s)	58, 902, 1103, 1257
ApoI	RAATTY	1 cut(s)	167
AseI	ATTAAT	1 cut(s)	866
Asp700I	GAANNNNTTC	1 cut(s)	1086
Asp718I	GGTACC	1 cut(s)	86
AspLEI	GCGC	1 cut(s)	1025
AspS9I	GGNCC	4 cut(s)	664, 701, 903, 1257
AsuC2I	CCSGG	1 cut(s)	906
AsuHPI	GGTGA	5 cut(s)	163, 316, 907, 1138, 1264
AsuII	TTCGAA	2 cut(s)	458, 572
AvaII	GGWCC	2 cut(s)	664, 701
BaeGI	GKGCMC	1 cut(s)	997
BanI	GGYRCC	2 cut(s)	86, 994
BarI	GAAGNNNNNNTAC	2 cut(s)	435, 467
BbsI	GAAGAC	1 cut(s)	756
BbvCI	CCTCAGC	1 cut(s)	610
BccI	CCATC	5 cut(s)	185, 623, 836, 997, 1229
BceAI	ACGGC	1 cut(s)	1090
BciT130I	CCWGG	2 cut(s)	632, 1067
BciVI	GTATCC	1 cut(s)	1158
BclI	TGATCA	1 cut(s)	1117
BcnI	CCSGG	1 cut(s)	906
BfaI	CTAG	5 cut(s)	656, 743, 821, 845, 956
BfrI	CTTAAG	1 cut(s)	77
BfuI	GTATCC	1 cut(s)	1158
BglI	GCCNNNNNGGC	1 cut(s)	854
Bme1390I	CCNGG	3 cut(s)	632, 906, 1067
Bme18I	GGWCC	2 cut(s)	664, 701
BmgT120I	GGNCC	4 cut(s)	664, 701, 903, 1257
BmiI	GGNNCC	3 cut(s)	88, 996, 1043
BmrFI	CCNGG	3 cut(s)	632, 906, 1067
BmsI	GCATC	2 cut(s)	833, 990
BpiI	GAAGAC	1 cut(s)	756
BpmI	CTGGAG	2 cut(s)	715, 1060
Bpu10I	CCTNAGC	1 cut(s)	610
Bpu14I	TTCGAA	2 cut(s)	458, 572
BpuEI	CTTGAG	1 cut(s)	930
BpuMI	CCSGG	1 cut(s)	906
BsaJI	CCNNGG	4 cut(s)	55, 630, 1065, 1260
BsaWI	WCCGGW	1 cut(s)	522
BsaXI	ACNNNNNCTCC	2 cut(s)	1033, 1063
Bsc4I	CCNNNNNNNGG	3 cut(s)	56, 529, 621
Bse1I	ACTGG	2 cut(s)	327, 732
Bse3DI	GCAATG	1 cut(s)	442
BseBI	CCWGG	2 cut(s)	632, 1067
BseDI	CCNNGG	4 cut(s)	55, 630, 1065, 1260
BseGI	GGATG	3 cut(s)	514, 605, 824
BseLI	CCNNNNNNNGG	3 cut(s)	56, 529, 621
BseMI	GCAATG	1 cut(s)	442
BseMII	CTCAG	2 cut(s)	624, 807
BseNI	ACTGG	2 cut(s)	327, 732
BseSI	GKGCMC	1 cut(s)	997
BseYI	CCCAGC	1 cut(s)	82
BshFI	GGCC	4 cut(s)	60, 904, 1105, 1259
BshNI	GGYRCC	2 cut(s)	86, 994
BsiSI	CCGG	2 cut(s)	523, 906
BslI	CCNNNNNNNGG	3 cut(s)	56, 529, 621
BsmI	GAATGC	1 cut(s)	1135
BsnI	GGCC	4 cut(s)	60, 904, 1105, 1259
Bsp119I	TTCGAA	2 cut(s)	458, 572
Bsp1286I	GDGCHC	1 cut(s)	997
Bsp143I	GATC	5 cut(s)	376, 532, 908, 930, 1117
BspACI	CCGC	2 cut(s)	311, 1032
BspANI	GGCC	4 cut(s)	60, 904, 1105, 1259
BspCNI	CTCAG	2 cut(s)	623, 806
BspLI	GGNNCC	3 cut(s)	88, 996, 1043
BspPI	GGATC	3 cut(s)	540, 916, 938
BspT104I	TTCGAA	2 cut(s)	458, 572
BspT107I	GGYRCC	2 cut(s)	86, 994
BspTI	CTTAAG	1 cut(s)	77
BsrDI	GCAATG	1 cut(s)	442
BsrI	ACTGG	2 cut(s)	327, 732
BssECI	CCNNGG	4 cut(s)	55, 630, 1065, 1260
BssMI	GATC	5 cut(s)	376, 532, 908, 930, 1117
BssT1I	CCWWGG	2 cut(s)	55, 1260
Bst2UI	CCWGG	2 cut(s)	632, 1067
Bst4CI	ACNGT	2 cut(s)	30, 724
Bst6I	CTCTTC	1 cut(s)	711
BstAFI	CTTAAG	1 cut(s)	77
BstAPI	GCANNNNNTGC	1 cut(s)	1107
BstBI	TTCGAA	2 cut(s)	458, 572
BstC8I	GCNNGC	3 cut(s)	433, 878, 1103
BstDEI	CTNAG	3 cut(s)	37, 610, 793
BstF5I	GGATG	3 cut(s)	514, 605, 824
BstHHI	GCGC	1 cut(s)	1025
BstKTI	GATC	5 cut(s)	379, 535, 911, 933, 1120
BstMBI	GATC	5 cut(s)	376, 532, 908, 930, 1117
BstMWI	GCNNNNNNNGC	7 cut(s)	251, 437, 725, 854, 1022, 1029, 1107
BstNI	CCWGG	2 cut(s)	632, 1067
BstSCI	CCNGG	3 cut(s)	630, 904, 1065
BstSLI	GKGCMC	1 cut(s)	997
BstV2I	GAAGAC	1 cut(s)	756
BstX2I	RGATCY	1 cut(s)	532
BstYI	RGATCY	1 cut(s)	532
BsuI	GTATCC	1 cut(s)	1158
BsuRI	GGCC	4 cut(s)	60, 904, 1105, 1259
BtsCI	GGATG	3 cut(s)	514, 605, 824
BtsI	GCAGTG	2 cut(s)	277, 1032
BtsIMutI	CAGTG	3 cut(s)	277, 838, 1032
Cac8I	GCNNGC	3 cut(s)	433, 878, 1103
CfoI	GCGC	1 cut(s)	1025
Cfr13I	GGNCC	4 cut(s)	664, 701, 903, 1257
Csp6I	GTAC	2 cut(s)	87, 352
CviAII	CATG	2 cut(s)	45, 1019
CviQI	GTAC	2 cut(s)	87, 352
DdeI	CTNAG	3 cut(s)	37, 610, 793
DpnI	GATC	5 cut(s)	378, 534, 910, 932, 1119
DpnII	GATC	5 cut(s)	376, 532, 908, 930, 1117
DraIII	CACNNNGTG	1 cut(s)	20
Eam1104I	CTCTTC	1 cut(s)	711
EarI	CTCTTC	1 cut(s)	711
Eco130I	CCWWGG	2 cut(s)	55, 1260
Eco47I	GGWCC	2 cut(s)	664, 701
Eco57I	CTGAAG	1 cut(s)	1101
EcoO109I	RGGNCCY	1 cut(s)	701
EcoRI	GAATTC	1 cut(s)	167
EcoRII	CCWGG	2 cut(s)	630, 1065
EcoT14I	CCWWGG	2 cut(s)	55, 1260
ErhI	CCWWGG	2 cut(s)	55, 1260
FaeI	CATG	2 cut(s)	48, 1022
FatI	CATG	2 cut(s)	44, 1018
FauI	CCCGC	1 cut(s)	1025
FbaI	TGATCA	1 cut(s)	1117
FokI	GGATG	3 cut(s)	501, 592, 811
FspBI	CTAG	5 cut(s)	656, 743, 821, 845, 956
GlaI	GCGC	1 cut(s)	1024
GsaI	CCCAGC	1 cut(s)	86
GsuI	CTGGAG	2 cut(s)	715, 1060
HaeIII	GGCC	4 cut(s)	60, 904, 1105, 1259
HapII	CCGG	2 cut(s)	523, 906
HhaI	GCGC	1 cut(s)	1025
Hin1II	CATG	2 cut(s)	48, 1022
Hin6I	GCGC	1 cut(s)	1023
HinP1I	GCGC	1 cut(s)	1023
HincII	GTYRAC	2 cut(s)	26, 250
HindII	GTYRAC	2 cut(s)	26, 250
HindIII	AAGCTT	1 cut(s)	808
HinfI	GANTC	4 cut(s)	362, 393, 482, 817
HpaI	GTTAAC	1 cut(s)	250
HpaII	CCGG	2 cut(s)	523, 906
HphI	GGTGA	5 cut(s)	163, 316, 907, 1138, 1264
Hpy166II	GTNNAC	5 cut(s)	26, 127, 250, 505, 740
Hpy188I	TCNGA	5 cut(s)	361, 925, 1081, 1092, 1122
Hpy188III	TCNNGA	3 cut(s)	985, 1039, 1318
Hpy8I	GTNNAC	5 cut(s)	26, 127, 250, 505, 740
HpyCH4III	ACNGT	2 cut(s)	30, 724
HpyCH4V	TGCA	7 cut(s)	261, 416, 468, 719, 981, 1101, 1133
HpyF10VI	GCNNNNNNNGC	7 cut(s)	251, 437, 725, 854, 1022, 1029, 1107
HpyF3I	CTNAG	3 cut(s)	37, 610, 793
Hsp92II	CATG	2 cut(s)	48, 1022
HspAI	GCGC	1 cut(s)	1023
KpnI	GGTACC	1 cut(s)	90
Ksp22I	TGATCA	1 cut(s)	1117
KspAI	GTTAAC	1 cut(s)	250
Kzo9I	GATC	5 cut(s)	376, 532, 908, 930, 1117
LmnI	GCTCC	1 cut(s)	1041
LweI	GCATC	2 cut(s)	833, 990
MaeI	CTAG	5 cut(s)	656, 743, 821, 845, 956
MaeIII	GTNAC	1 cut(s)	295
MalI	GATC	5 cut(s)	378, 534, 910, 932, 1119
MboI	GATC	5 cut(s)	376, 532, 908, 930, 1117
MboII	GAAGA	4 cut(s)	682, 698, 758, 761
MfeI	CAATTG	3 cut(s)	120, 256, 1169
MflI	RGATCY	1 cut(s)	532
MhlI	GDGCHC	1 cut(s)	997
MluCI	AATT	8 cut(s)	120, 167, 256, 421, 867, 912, 1169, 1181
MlyI	GAGTC	1 cut(s)	826
MmeI	TCCRAC	2 cut(s)	946, 1034
MroXI	GAANNNNTTC	1 cut(s)	1086
MseI	TTAA	7 cut(s)	78, 197, 249, 528, 866, 870, 1351
MspCI	CTTAAG	1 cut(s)	77
MspI	CCGG	2 cut(s)	523, 906
MspR9I	CCNGG	3 cut(s)	632, 906, 1067
MunI	CAATTG	3 cut(s)	120, 256, 1169
Mva1269I	GAATGC	1 cut(s)	1135
MvaI	CCWGG	2 cut(s)	632, 1067
MwoI	GCNNNNNNNGC	7 cut(s)	251, 437, 725, 854, 1022, 1029, 1107
NciI	CCSGG	1 cut(s)	906
NdeII	GATC	5 cut(s)	376, 532, 908, 930, 1117
NlaIII	CATG	2 cut(s)	48, 1022
NlaIV	GGNNCC	3 cut(s)	88, 996, 1043
NmuCI	GTSAC	1 cut(s)	295
NspV	TTCGAA	2 cut(s)	458, 572
PacI	TTAATTAA	1 cut(s)	870
PctI	GAATGC	1 cut(s)	1135
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	3 cut(s)	362, 393, 482
PflMI	CCANNNNNTGG	1 cut(s)	621
PleI	GAGTC	1 cut(s)	825
PpsI	GAGTC	1 cut(s)	825
PpuMI	RGGWCCY	1 cut(s)	701
PshBI	ATTAAT	1 cut(s)	866
PsiI	TTATAA	1 cut(s)	1340
Psp5II	RGGWCCY	1 cut(s)	701
Psp6I	CCWGG	2 cut(s)	630, 1065
PspFI	CCCAGC	1 cut(s)	82
PspGI	CCWGG	2 cut(s)	630, 1065
PspN4I	GGNNCC	3 cut(s)	88, 996, 1043
PspPI	GGNCC	4 cut(s)	664, 701, 903, 1257
PspPPI	RGGWCCY	1 cut(s)	701
PsuI	RGATCY	1 cut(s)	532
RsaI	GTAC	2 cut(s)	88, 353
RsaNI	GTAC	2 cut(s)	87, 352
SaqAI	TTAA	7 cut(s)	78, 197, 249, 528, 866, 870, 1351
Sau3AI	GATC	5 cut(s)	376, 532, 908, 930, 1117
Sau96I	GGNCC	4 cut(s)	664, 701, 903, 1257
SchI	GAGTC	1 cut(s)	826
ScrFI	CCNGG	3 cut(s)	632, 906, 1067
SduI	GDGCHC	1 cut(s)	997
SfaNI	GCATC	2 cut(s)	833, 990
SfuI	TTCGAA	2 cut(s)	458, 572
SinI	GGWCC	2 cut(s)	664, 701
SmlI	CTYRAG	2 cut(s)	77, 945
SmoI	CTYRAG	2 cut(s)	77, 945
Sse9I	AATT	8 cut(s)	120, 167, 256, 421, 867, 912, 1169, 1181
SsiI	CCGC	2 cut(s)	311, 1032
SspMI	CTAG	5 cut(s)	656, 743, 821, 845, 956
StyD4I	CCNGG	3 cut(s)	630, 904, 1065
StyI	CCWWGG	2 cut(s)	55, 1260
TaaI	ACNGT	2 cut(s)	30, 724
TaqI	TCGA	4 cut(s)	458, 552, 572, 933
TasI	AATT	8 cut(s)	120, 167, 256, 421, 867, 912, 1169, 1181
TatI	WGTACW	1 cut(s)	351
TfiI	GAWTC	3 cut(s)	362, 393, 482
Tru1I	TTAA	7 cut(s)	78, 197, 249, 528, 866, 870, 1351
Tru9I	TTAA	7 cut(s)	78, 197, 249, 528, 866, 870, 1351
TscAI	CASTG	3 cut(s)	284, 838, 1032
TseFI	GTSAC	1 cut(s)	295
Tsp45I	GTSAC	1 cut(s)	295
TspDTI	ATGAA	6 cut(s)	204, 357, 443, 503, 1194, 1307
TspGWI	ACGGA	1 cut(s)	314
TspRI	CASTG	3 cut(s)	284, 838, 1032
Van91I	CCANNNNNTGG	1 cut(s)	621
Vha464I	CTTAAG	1 cut(s)	77
VpaK11BI	GGWCC	2 cut(s)	664, 701
VspI	ATTAAT	1 cut(s)	866
XapI	RAATTY	1 cut(s)	167
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	5 cut(s)	656, 743, 821, 845, 956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.