Rw5G041180

UDP-glycosyltransferase 76E2-like

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
72579454 .. 72582464
3011 bp
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UTR
Exon/CDS
Intron
Rw5G041180.1

Sequence Viewer

Length: 1362 bp
ATGGAGATGCAAAAGAGAACCCCGAGAGGTCAGAGACTGGTCCTAGTTCCAACTCCATACCAAGGCCACATAAACCCAATGCTTCAGTTGGGTACGTTTCTTCACTCAAAGGGATTTTCCATTACCATCGTTCACACCCATTTCAACTCTCCAAGCCCTTCCAACCACCCTGAGTTCACATTCATTCCGATTCAAGACGGCCTAACTGTTCCTCTAGTCTCATCCGGGAATATAATAGCTATTCTGTTGGCTCTCAATGCCAATTGCAAATCGAGTTTCGAACAATGTTTAACTACTCAAGTAATGAAACAAGAACCGGAGAAGAAGATCACCTGCATCATCTACGATGAATTCATGTACTTCTCTGAAGCTGCTGCTAATTATCTGAATATTCCAAGCATCATCCTCCGTACTACCAGTGCAGCCAACTTTCATGCTCGATCTACCGTCGTAGATCTTCATTCAAAAGGCCACATTCCCTTCCCAGAGTCCATGTCATCGGAGCCGGTGCCCCAACTTCATCCCCTCAGATTCAAGGATCTGCCCATCTCACCCTGGGACACGTTAGAAAACTTCTTAAAACTAGTAGTTAAGTCGCATGATGTTGGGAGATCTTCGGCCATAATTTGTAATACCATAGACTGCCTTGACCAATCATCACTAGCACGGATCCAAAAACATTGCCAAGTACCGATCTTCTGCGTAGGCCCTCTTCACAAAATCACAACAGCGGCCTCTAGTAGTTTACTTGAAGAGGACTCATGCTGCATTGAGTGGCTTGACAAGCAATCTCACAAGTCAGTTATCTATGTCAGTTTGGGGAGTATAGCATCCATTGGTGAGAAAGAACTGGCAGAAATGGCTTGGGGATTAGCCAACAGCCAGCAACCTTTTTTGTGGGTGATCAGACCTGGCTCCATTACCGGCTCCGATTGGATCGAGCTATTGCCTCAAGAGTTTAGAGAAGCTATTGGAGAAAGAGGTTTCATAGTGAAATGGGCACCCCAAAGGGAAGTTTTGGCTCATGGTGCTGTGGGCGCGTTTTGGACCCATTGTGGCTGGAATTCAACTCTTGAAAGCATATCTGAAGGGGTTCCGATGATTTGCAAACCATGTTTTGGTGATCAGAAGGTGCATGCGAGGTATGTTAGCAAAGTATGGAGACTAGGTTTAGAATTGGAGGATGAGTTTGAGAGAGGAGAGATAGAGAGAGCTGTTAGGAAACTCATGGTAAATAGTGATGGGGAAGAAATAAGGGCGAGGGCCAAGGATATGAAAGAGAAAATACAAGTTTCTATGAGCAAGGGTGGATCTAACTACAAAAGAAAGAGTGAACTTGTTGAATTCATTATGGCATTCTAA

Protein Analysis

453

Amino Acids

50.81

Weight (kDa)

6.6

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 264 - 412 3.1e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 341
Acc36I ACCTGC 1 cut(s) 341
AccB1I GGYRCC 2 cut(s) 508, 1000
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccII CGCG 1 cut(s) 1040
AciI CCGC 1 cut(s) 731
AclWI GGATC 5 cut(s) 546, 664, 677, 944, 1318
AcoI YGGCCR 1 cut(s) 618
AcsI RAATTY 3 cut(s) 350, 1063, 1343
AcuI CTGAAG 3 cut(s) 68, 387, 1107
AfaI GTAC 4 cut(s) 94, 359, 412, 690
AfiI CCNNNNNNNGG 2 cut(s) 62, 1118
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 8 cut(s) 145, 194, 465, 535, 752, 1068, 1076, 1343
AhlI ACTAGT 1 cut(s) 583
AjnI CCWGG 2 cut(s) 554, 910
AluBI AGCT 5 cut(s) 239, 371, 943, 968, 1214
AluI AGCT 5 cut(s) 239, 371, 943, 968, 1214
Alw26I GTCTC 3 cut(s) 28, 223, 1156
AlwI GGATC 5 cut(s) 546, 664, 677, 944, 1318
AlwNI CAGNNNCTG 1 cut(s) 37
Ama87I CYCGRG 1 cut(s) 22
AoxI GGCC 7 cut(s) 64, 199, 469, 618, 706, 732, 1263
ApeKI GCWGC 4 cut(s) 371, 374, 422, 765
ApoI RAATTY 3 cut(s) 350, 1063, 1343
Asp700I GAANNNNTTC 1 cut(s) 1092
AspLEI GCGC 1 cut(s) 1040
AspS9I GGNCC 4 cut(s) 40, 707, 1047, 1263
AsuC2I CCSGG 1 cut(s) 226
AsuHPI GGTGA 5 cut(s) 322, 543, 851, 913, 1133
AsuII TTCGAA 1 cut(s) 279
AvaI CYCGRG 1 cut(s) 22
AvaII GGWCC 2 cut(s) 40, 1047
BaeGI GKGCMC 2 cut(s) 513, 1003
BamHI GGATCC 1 cut(s) 669
BanI GGYRCC 2 cut(s) 508, 1000
BarI GAAGNNNNNNTAC 2 cut(s) 696, 728
BbvI GCAGC 4 cut(s) 358, 361, 434, 752
BccI CCATC 3 cut(s) 134, 554, 1235
BceAI ACGGC 1 cut(s) 214
BciT130I CCWGG 2 cut(s) 556, 912
BclI TGATCA 2 cut(s) 903, 1123
BcnI CCSGG 1 cut(s) 226
BcoDI GTCTC 3 cut(s) 28, 223, 1156
BcuI ACTAGT 1 cut(s) 583
BfaI CTAG 6 cut(s) 44, 215, 584, 662, 738, 1166
BfuAI ACCTGC 1 cut(s) 341
BglII AGATCT 2 cut(s) 454, 611
BisI GCNGC 5 cut(s) 372, 375, 423, 732, 766
BlsI GCNGC 5 cut(s) 373, 376, 424, 733, 767
Bme1390I CCNGG 3 cut(s) 226, 556, 912
Bme18I GGWCC 2 cut(s) 40, 1047
BmeT110I CYCGRG 1 cut(s) 22
BmgT120I GGNCC 4 cut(s) 40, 707, 1047, 1263
BmiI GGNNCC 8 cut(s) 504, 510, 671, 916, 928, 1002, 1049, 1095
BmrFI CCNGG 3 cut(s) 226, 556, 912
BmsI GCATC 3 cut(s) 345, 408, 839
Bpu14I TTCGAA 1 cut(s) 279
BpuEI CTTGAG 2 cut(s) 282, 936
BpuMI CCSGG 1 cut(s) 226
BsaJI CCNNGG 4 cut(s) 61, 554, 555, 1266
BsaWI WCCGGW 1 cut(s) 316
BsaXI ACNNNNNCTCC 4 cut(s) 1153, 1172, 1183, 1202
Bsc4I CCNNNNNNNGG 2 cut(s) 62, 1118
Bse118I RCCGGY 2 cut(s) 505, 923
Bse1I ACTGG 3 cut(s) 42, 417, 855
Bse3DI GCAATG 1 cut(s) 679
BseBI CCWGG 2 cut(s) 556, 912
BseDI CCNNGG 4 cut(s) 61, 554, 555, 1266
BseGI GGATG 5 cut(s) 221, 402, 520, 830, 1189
BseLI CCNNNNNNNGG 2 cut(s) 62, 1118
BseMI GCAATG 1 cut(s) 679
BseMII CTCAG 2 cut(s) 162, 541
BseNI ACTGG 3 cut(s) 42, 417, 855
BseRI GAGGAG 1 cut(s) 1212
BseSI GKGCMC 2 cut(s) 513, 1003
BseXI GCAGC 4 cut(s) 358, 361, 434, 752
BsgI GTGCAG 1 cut(s) 441
Bsh1236I CGCG 1 cut(s) 1040
BshFI GGCC 7 cut(s) 66, 201, 471, 620, 708, 734, 1265
BshNI GGYRCC 2 cut(s) 508, 1000
BsiHKCI CYCGRG 1 cut(s) 22
BsiSI CCGG 4 cut(s) 225, 317, 506, 924
BslFI GGGAC 1 cut(s) 572
BslI CCNNNNNNNGG 2 cut(s) 62, 1118
BsmAI GTCTC 3 cut(s) 28, 223, 1156
BsmFI GGGAC 1 cut(s) 572
BsmI GAATGC 1 cut(s) 1355
BsnI GGCC 7 cut(s) 66, 201, 471, 620, 708, 734, 1265
BsoBI CYCGRG 1 cut(s) 22
Bsp119I TTCGAA 1 cut(s) 279
Bsp1286I GDGCHC 2 cut(s) 513, 1003
BspACI CCGC 1 cut(s) 731
BspANI GGCC 7 cut(s) 66, 201, 471, 620, 708, 734, 1265
BspCNI CTCAG 2 cut(s) 163, 540
BspFNI CGCG 1 cut(s) 1040
BspLI GGNNCC 8 cut(s) 504, 510, 671, 916, 928, 1002, 1049, 1095
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 5 cut(s) 546, 664, 677, 944, 1318
BspT104I TTCGAA 1 cut(s) 279
BspT107I GGYRCC 2 cut(s) 508, 1000
BsrDI GCAATG 1 cut(s) 679
BsrFI RCCGGY 2 cut(s) 505, 923
BsrI ACTGG 3 cut(s) 42, 417, 855
BssAI RCCGGY 2 cut(s) 505, 923
BssECI CCNNGG 4 cut(s) 61, 554, 555, 1266
BssT1I CCWWGG 2 cut(s) 61, 1266
Bst2UI CCWGG 2 cut(s) 556, 912
Bst4CI ACNGT 2 cut(s) 208, 448
Bst6I CTCTTC 2 cut(s) 717, 747
BstBI TTCGAA 1 cut(s) 279
BstC8I GCNNGC 2 cut(s) 884, 1137
BstDEI CTNAG 2 cut(s) 171, 527
BstF5I GGATG 5 cut(s) 221, 402, 520, 830, 1189
BstFNI CGCG 1 cut(s) 1040
BstHHI GCGC 1 cut(s) 1040
BstMAI GTCTC 3 cut(s) 28, 223, 1156
BstMWI GCNNNNNNNGC 5 cut(s) 257, 784, 860, 1028, 1037
BstNI CCWGG 2 cut(s) 556, 912
BstNSI RCATGY 1 cut(s) 1139
BstSCI CCNGG 3 cut(s) 224, 554, 910
BstSLI GKGCMC 2 cut(s) 513, 1003
BstUI CGCG 1 cut(s) 1040
BstV1I GCAGC 4 cut(s) 358, 361, 434, 752
BstX2I RGATCY 5 cut(s) 454, 538, 611, 669, 1310
BstYI RGATCY 5 cut(s) 454, 538, 611, 669, 1310
BsuRI GGCC 7 cut(s) 66, 201, 471, 620, 708, 734, 1265
BtsCI GGATG 5 cut(s) 221, 402, 520, 830, 1189
BtsIMutI CAGTG 1 cut(s) 424
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 2 cut(s) 884, 1137
CaiI CAGNNNCTG 1 cut(s) 37
CfoI GCGC 1 cut(s) 1040
Cfr10I RCCGGY 2 cut(s) 505, 923
Cfr13I GGNCC 4 cut(s) 40, 707, 1047, 1263
Csp6I GTAC 4 cut(s) 93, 358, 411, 689
CviAII CATG 9 cut(s) 355, 434, 493, 599, 762, 1025, 1113, 1136, 1228
CviQI GTAC 4 cut(s) 93, 358, 411, 689
DdeI CTNAG 2 cut(s) 171, 527
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 2 cut(s) 717, 747
EarI CTCTTC 2 cut(s) 717, 747
Eco130I CCWWGG 2 cut(s) 61, 1266
Eco47I GGWCC 2 cut(s) 40, 1047
Eco57I CTGAAG 3 cut(s) 68, 387, 1107
Eco88I CYCGRG 1 cut(s) 22
EcoO109I RGGNCCY 1 cut(s) 707
EcoRI GAATTC 3 cut(s) 350, 1063, 1343
EcoRII CCWGG 2 cut(s) 554, 910
EcoT14I CCWWGG 2 cut(s) 61, 1266
ErhI CCWWGG 2 cut(s) 61, 1266
FaeI CATG 9 cut(s) 358, 437, 496, 602, 765, 1028, 1116, 1139, 1231
FaqI GGGAC 1 cut(s) 572
FatI CATG 9 cut(s) 354, 433, 492, 598, 761, 1024, 1112, 1135, 1227
FbaI TGATCA 2 cut(s) 903, 1123
Fnu4HI GCNGC 5 cut(s) 372, 375, 423, 732, 766
FokI GGATG 5 cut(s) 208, 389, 507, 817, 1196
Fsp4HI GCNGC 5 cut(s) 372, 375, 423, 732, 766
FspBI CTAG 6 cut(s) 44, 215, 584, 662, 738, 1166
GlaI GCGC 1 cut(s) 1039
GluI GCNGC 5 cut(s) 372, 375, 423, 732, 766
HaeIII GGCC 7 cut(s) 66, 201, 471, 620, 708, 734, 1265
HapII CCGG 4 cut(s) 225, 317, 506, 924
HhaI GCGC 1 cut(s) 1040
Hin1II CATG 9 cut(s) 358, 437, 496, 602, 765, 1028, 1116, 1139, 1231
Hin6I GCGC 1 cut(s) 1038
HinP1I GCGC 1 cut(s) 1038
HinfI GANTC 4 cut(s) 190, 488, 531, 758
HpaII CCGG 4 cut(s) 225, 317, 506, 924
HphI GGTGA 5 cut(s) 322, 543, 851, 913, 1133
Hpy166II GTNNAC 4 cut(s) 133, 177, 746, 1334
Hpy188III TCNNGA 3 cut(s) 194, 953, 1073
Hpy8I GTNNAC 4 cut(s) 133, 177, 746, 1334
Hpy99I CGWCG 1 cut(s) 452
HpyAV CCTTC 4 cut(s) 168, 490, 1082, 1123
HpyCH4III ACNGT 2 cut(s) 208, 448
HpyCH4IV ACGT 2 cut(s) 95, 563
HpyCH4V TGCA 7 cut(s) 10, 267, 336, 422, 768, 1107, 1135
HpyF10VI GCNNNNNNNGC 5 cut(s) 257, 784, 860, 1028, 1037
HpyF3I CTNAG 2 cut(s) 171, 527
HpySE526I ACGT 2 cut(s) 95, 563
Hsp92II CATG 9 cut(s) 358, 437, 496, 602, 765, 1028, 1116, 1139, 1231
HspAI GCGC 1 cut(s) 1038
Ksp22I TGATCA 2 cut(s) 903, 1123
LmnI GCTCC 3 cut(s) 502, 920, 932
Lsp1109I GCAGC 4 cut(s) 358, 361, 434, 752
LweI GCATC 3 cut(s) 345, 408, 839
MaeI CTAG 6 cut(s) 44, 215, 584, 662, 738, 1166
MaeII ACGT 2 cut(s) 95, 563
MboII GAAGA 9 cut(s) 92, 334, 337, 449, 606, 688, 704, 764, 1259
MfeI CAATTG 1 cut(s) 262
MflI RGATCY 5 cut(s) 454, 538, 611, 669, 1310
MhlI GDGCHC 2 cut(s) 513, 1003
MluCI AATT 7 cut(s) 262, 350, 379, 624, 1063, 1175, 1343
MlyI GAGTC 2 cut(s) 497, 752
MmeI TCCRAC 2 cut(s) 74, 186
MroXI GAANNNNTTC 1 cut(s) 1092
MseI TTAA 3 cut(s) 290, 578, 591
MspA1I CMGCKG 1 cut(s) 731
MspI CCGG 4 cut(s) 225, 317, 506, 924
MspR9I CCNGG 3 cut(s) 226, 556, 912
MunI CAATTG 1 cut(s) 262
Mva1269I GAATGC 1 cut(s) 1355
MvaI CCWGG 2 cut(s) 556, 912
MvnI CGCG 1 cut(s) 1040
MwoI GCNNNNNNNGC 5 cut(s) 257, 784, 860, 1028, 1037
NciI CCSGG 1 cut(s) 226
NlaIII CATG 9 cut(s) 358, 437, 496, 602, 765, 1028, 1116, 1139, 1231
NlaIV GGNNCC 8 cut(s) 504, 510, 671, 916, 928, 1002, 1049, 1095
NspI RCATGY 1 cut(s) 1139
NspV TTCGAA 1 cut(s) 279
PaeI GCATGC 1 cut(s) 1139
PaqCI CACCTGC 1 cut(s) 341
PasI CCCWGGG 1 cut(s) 555
PctI GAATGC 1 cut(s) 1355
PdmI GAANNNNTTC 1 cut(s) 1092
PfeI GAWTC 2 cut(s) 190, 531
PflMI CCANNNNNTGG 1 cut(s) 1118
PfoI TCCNGGA 1 cut(s) 224
PkrI GCNGC 5 cut(s) 373, 376, 424, 733, 767
PleI GAGTC 2 cut(s) 496, 752
PpsI GAGTC 2 cut(s) 496, 752
Psp6I CCWGG 2 cut(s) 554, 910
PspGI CCWGG 2 cut(s) 554, 910
PspN4I GGNNCC 8 cut(s) 504, 510, 671, 916, 928, 1002, 1049, 1095
PspPI GGNCC 4 cut(s) 40, 707, 1047, 1263
PstNI CAGNNNCTG 1 cut(s) 37
PsuI RGATCY 5 cut(s) 454, 538, 611, 669, 1310
RsaI GTAC 4 cut(s) 94, 359, 412, 690
RsaNI GTAC 4 cut(s) 93, 358, 411, 689
SaqAI TTAA 3 cut(s) 290, 578, 591
SatI GCNGC 5 cut(s) 372, 375, 423, 732, 766
Sau96I GGNCC 4 cut(s) 40, 707, 1047, 1263
SchI GAGTC 2 cut(s) 497, 752
ScrFI CCNGG 3 cut(s) 226, 556, 912
SduI GDGCHC 2 cut(s) 513, 1003
SfaNI GCATC 3 cut(s) 345, 408, 839
SfuI TTCGAA 1 cut(s) 279
SinI GGWCC 2 cut(s) 40, 1047
SmlI CTYRAG 2 cut(s) 297, 951
SmoI CTYRAG 2 cut(s) 297, 951
SpeI ACTAGT 1 cut(s) 583
SphI GCATGC 1 cut(s) 1139
Sse9I AATT 7 cut(s) 262, 350, 379, 624, 1063, 1175, 1343
SsiI CCGC 1 cut(s) 731
SspI AATATT 1 cut(s) 391
SspMI CTAG 6 cut(s) 44, 215, 584, 662, 738, 1166
StyD4I CCNGG 3 cut(s) 224, 554, 910
StyI CCWWGG 2 cut(s) 61, 1266
TaaI ACNGT 2 cut(s) 208, 448
TaiI ACGT 2 cut(s) 98, 566
TaqI TCGA 4 cut(s) 272, 279, 439, 939
TasI AATT 7 cut(s) 262, 350, 379, 624, 1063, 1175, 1343
TatI WGTACW 1 cut(s) 357
TauI GCSGC 1 cut(s) 734
TfiI GAWTC 2 cut(s) 190, 531
Tru1I TTAA 3 cut(s) 290, 578, 591
Tru9I TTAA 3 cut(s) 290, 578, 591
TscAI CASTG 1 cut(s) 424
TseI GCWGC 4 cut(s) 371, 374, 422, 765
TspGWI ACGGA 2 cut(s) 398, 682
TspRI CASTG 1 cut(s) 424
Van91I CCANNNNNTGG 1 cut(s) 1118
VpaK11BI GGWCC 2 cut(s) 40, 1047
XapI RAATTY 3 cut(s) 350, 1063, 1343
XceI RCATGY 1 cut(s) 1139
XmnI GAANNNNTTC 1 cut(s) 1092
XspI CTAG 6 cut(s) 44, 215, 584, 662, 738, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.