Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000714

Physical Location & Seq

Genomic Coordinates Reverse (-)

7476084 .. 7477234

Gene Structure 1151 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1090200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 759 bp

ATGATGCTGGAACTGGTACCAGGACTTCAACCCTTAAGATTTAAAGATCTACCCATTAGCAACTTCGGAGGTTTGGATGACTTACTACAACTAATAGCAAAAATACACGATTCAAGGTCATCTTCAACCGTCATTTGGAACACCATGGACTGCCTTGAAAAATCATCGCTGGCACAACTTCAGAATGAGTACCAAATTCTATTGTTTCCTATCGGTCCTCTGCACAAAACTGTTCCATCTCCGTCTATAAGCTTGTTGAAAGAGGACCAGAGTTGTATGTCATGGCTCGACGAAAAAGCACACAACTCTGTCATCTATGTAAGCCTAGGAAGCATAGCATTAATGGACAGTAAAGAACAAGAGGAAATGGCATGGCAGGGTCACATAGTGAAGTGGACACCACAAAAGAAAGTCCTTGCACACAGCGCAGTGGGAGGGTTTTGGAGTCATTGCGGTTGGAATTCAACCCTAGAGAGTATCTCCGAAGGAGTCCCGTTGATATGTCAACCATATTTTGGGGACCAGAGAGTGAACTCGAGGTATTTGAGTCAAGTATGGGGAGTAGGTCTGGAATGGGATAATGATATGAACAGAGGACCAATAAAGAAAGCGATAAGAACACTGATGGTAAGCAAAGAAGGGGAACCAACAAGGCAAAGAGCAAAATATTTGAAGGTGAAAATTGAGCTTTCTATGAAGCAAGGTGGCTCTTCGTATAATTCCTTGAACGAATTAGTAGACCTTATCTTATCATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047254 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204

Pfam Domains

Protein Families

UDPGT

Protein Analysis

253

Amino Acids

28.39

Weight (kDa)

6.31

Isoelectric Point (pI)

48.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	121 - 210	3e-19	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26480 AT3G46650 AT3G46660 AT3G46670 AT3G46680 AT3G46690 AT3G46700 AT3G46720 AT5G05860 AT5G05870 AT5G37950 AT5G37950 AT5G38010 AT5G38040 AT5G59580 AT5G59590
fragaria_vesca	FvH4_3g37270 FvH4_3g37280 FvH4_3g37280 FvH4_3g37310
malus_domestica	MD00G1075200.v1.1 MD03G1081900.v1.1 MD03G1082100.v1.1 MD03G1082200.v1.1 MD03G1082400.v1.1 MD03G1082500.v1.1 MD11G1090200.v1.1 MD11G1090300.v1.1 MD11G1090500.v1.1
prunus_persica	Prupe.6G007700_v2.0.a1 Prupe.6G007700_v2.0.a1 Prupe.6G007800_v2.0.a1 Prupe.6G008000_v2.0.a1 Prupe.6G008200_v2.0.a1 Prupe.6G008300_v2.0.a1 Prupe.6G008400_v2.0.a1 Prupe.6G008600_v2.0.a1 Prupe.6G008700_v2.0.a1
pyrus_communis	pycom03g06530 pycom03g06540 pycom03g06550 pycom03g06570 pycom11g07520
rosa_chinensis	RchiOBHm_Chr4g0431001 RchiOBHm_Chr5g0067011 RchiOBHm_Chr5g0067091
rosa_laevigata	RLG00000035904 RLG00000035909 RLG00000035911
rosa_multiflora	Rmu_sc0000151.1_g000012 Rmu_sc0000151.1_g000013 Rmu_sc0006583.1_g000015
rosa_roxburghii	Rroxscaffold_1G00013980 Rroxscaffold_1G00014100
rosa_rugosa	Rorug05G0380800 Rorug05G0381400 Rorug05G0381600 Rorug05G0381700 Rorug05G0381700
rosa_samantha	Rh5AG440700 Rh5AG441400 Rh5BG457900 Rh5BG458600 Rh5BG458700 Rh5CG480800 Rh5CG480900 Rh5DG472900 Rh5DG473400 Rh5DG473600
rosa_wichuraiana	Rw4G026410 Rw5G041180 Rw5G041230 Rw5G041240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	16
AccB1I	GGYRCC	1 cut(s)	16
AccB7I	CCANNNNNTGG	1 cut(s)	515
AccI	GTMKAC	1 cut(s)	738
AciI	CCGC	1 cut(s)	453
AcsI	RAATTY	2 cut(s)	195, 460
AcuI	CTGAAG	1 cut(s)	164
AdeI	CACNNNGTG	1 cut(s)	388
AfaI	GTAC	2 cut(s)	18, 191
AfiI	CCNNNNNNNGG	2 cut(s)	135, 515
AflII	CTTAAG	1 cut(s)	34
AgsI	TTSAA	8 cut(s)	29, 114, 126, 158, 259, 465, 673, 727
AjnI	CCWGG	1 cut(s)	19
AluBI	AGCT	2 cut(s)	252, 688
AluI	AGCT	2 cut(s)	252, 688
Ama87I	CYCGRG	1 cut(s)	535
ApoI	RAATTY	2 cut(s)	195, 460
AseI	ATTAAT	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	16
AspA2I	CCTAGG	1 cut(s)	325
AspLEI	GCGC	1 cut(s)	428
AspS9I	GGNCC	4 cut(s)	215, 265, 520, 596
AsuHPI	GGTGA	1 cut(s)	688
AvaI	CYCGRG	1 cut(s)	535
AvaII	GGWCC	4 cut(s)	215, 265, 520, 596
AvrII	CCTAGG	1 cut(s)	325
BanI	GGYRCC	1 cut(s)	16
BarI	GAAGNNNNNNTAC	2 cut(s)	9, 41
BccI	CCATC	2 cut(s)	244, 619
BciT130I	CCWGG	1 cut(s)	21
BfaI	CTAG	2 cut(s)	326, 470
BfrI	CTTAAG	1 cut(s)	34
BglII	AGATCT	1 cut(s)	46
BlnI	CCTAGG	1 cut(s)	325
Bme1390I	CCNGG	1 cut(s)	21
Bme18I	GGWCC	4 cut(s)	215, 265, 520, 596
BmeT110I	CYCGRG	1 cut(s)	535
BmgT120I	GGNCC	4 cut(s)	215, 265, 520, 596
BmiI	GGNNCC	3 cut(s)	18, 521, 645
BmrFI	CCNGG	1 cut(s)	21
BplI	GAGNNNNNCTC	2 cut(s)	464, 496
BsaJI	CCNNGG	2 cut(s)	144, 325
Bsc4I	CCNNNNNNNGG	2 cut(s)	135, 515
Bse1I	ACTGG	1 cut(s)	18
Bse3DI	GCAATG	1 cut(s)	448
BseBI	CCWGG	1 cut(s)	21
BseDI	CCNNGG	2 cut(s)	144, 325
BseGI	GGATG	1 cut(s)	82
BseLI	CCNNNNNNNGG	2 cut(s)	135, 515
BseMI	GCAATG	1 cut(s)	448
BseNI	ACTGG	1 cut(s)	18
BsgI	GTGCAG	1 cut(s)	206
BshNI	GGYRCC	1 cut(s)	16
BsiHKCI	CYCGRG	1 cut(s)	535
BslFI	GGGAC	2 cut(s)	476, 533
BslI	CCNNNNNNNGG	2 cut(s)	135, 515
BsmFI	GGGAC	2 cut(s)	476, 533
BsoBI	CYCGRG	1 cut(s)	535
Bsp143I	GATC	1 cut(s)	46
Bsp19I	CCATGG	1 cut(s)	144
BspACI	CCGC	1 cut(s)	453
BspLI	GGNNCC	3 cut(s)	18, 521, 645
BspQI	GCTCTTC	1 cut(s)	715
BspT107I	GGYRCC	1 cut(s)	16
BspTI	CTTAAG	1 cut(s)	34
BsrDI	GCAATG	1 cut(s)	448
BsrI	ACTGG	1 cut(s)	18
BssECI	CCNNGG	2 cut(s)	144, 325
BssMI	GATC	1 cut(s)	46
BssT1I	CCWWGG	2 cut(s)	144, 325
Bst2UI	CCWGG	1 cut(s)	21
Bst4CI	ACNGT	3 cut(s)	130, 232, 350
Bst6I	CTCTTC	1 cut(s)	715
BstAFI	CTTAAG	1 cut(s)	34
BstC8I	GCNNGC	1 cut(s)	171
BstDSI	CCRYGG	1 cut(s)	144
BstF5I	GGATG	1 cut(s)	82
BstHHI	GCGC	1 cut(s)	428
BstKTI	GATC	1 cut(s)	49
BstMBI	GATC	1 cut(s)	46
BstMWI	GCNNNNNNNGC	2 cut(s)	330, 425
BstNI	CCWGG	1 cut(s)	21
BstSCI	CCNGG	1 cut(s)	19
BstX2I	RGATCY	1 cut(s)	46
BstYI	RGATCY	1 cut(s)	46
BtgI	CCRYGG	1 cut(s)	144
BtgZI	GCGATG	1 cut(s)	150
BtsCI	GGATG	1 cut(s)	82
BtsI	GCAGTG	1 cut(s)	435
BtsIMutI	CAGTG	2 cut(s)	435, 620
Cac8I	GCNNGC	1 cut(s)	171
CfoI	GCGC	1 cut(s)	428
Cfr13I	GGNCC	4 cut(s)	215, 265, 520, 596
Csp6I	GTAC	2 cut(s)	17, 190
CviAII	CATG	3 cut(s)	145, 282, 372
CviJI	RGCY	5 cut(s)	252, 286, 324, 688, 708
CviKI_1	RGCY	5 cut(s)	252, 286, 324, 688, 708
CviQI	GTAC	2 cut(s)	17, 190
DpnI	GATC	1 cut(s)	48
DpnII	GATC	1 cut(s)	46
DraI	TTTAAA	1 cut(s)	43
DraIII	CACNNNGTG	1 cut(s)	388
Eam1104I	CTCTTC	1 cut(s)	715
EarI	CTCTTC	1 cut(s)	715
Eco130I	CCWWGG	2 cut(s)	144, 325
Eco47I	GGWCC	4 cut(s)	215, 265, 520, 596
Eco57I	CTGAAG	1 cut(s)	164
Eco88I	CYCGRG	1 cut(s)	535
EcoRI	GAATTC	1 cut(s)	460
EcoRII	CCWGG	1 cut(s)	19
EcoT14I	CCWWGG	2 cut(s)	144, 325
ErhI	CCWWGG	2 cut(s)	144, 325
FaeI	CATG	3 cut(s)	148, 285, 375
FalI	AAGNNNNNCTT	2 cut(s)	106, 138
FaqI	GGGAC	2 cut(s)	476, 533
FatI	CATG	3 cut(s)	144, 281, 371
FblI	GTMKAC	1 cut(s)	738
FokI	GGATG	1 cut(s)	89
FspBI	CTAG	2 cut(s)	326, 470
GlaI	GCGC	1 cut(s)	427
HhaI	GCGC	1 cut(s)	428
Hin1II	CATG	3 cut(s)	148, 285, 375
Hin6I	GCGC	1 cut(s)	426
HinP1I	GCGC	1 cut(s)	426
HincII	GTYRAC	1 cut(s)	506
HindII	GTYRAC	1 cut(s)	506
HindIII	AAGCTT	1 cut(s)	250
HinfI	GANTC	4 cut(s)	110, 445, 489, 547
HphI	GGTGA	1 cut(s)	688
Hpy166II	GTNNAC	4 cut(s)	396, 506, 532, 739
Hpy188I	TCNGA	3 cut(s)	68, 183, 484
Hpy188III	TCNNGA	1 cut(s)	569
Hpy8I	GTNNAC	4 cut(s)	396, 506, 532, 739
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	3 cut(s)	479, 632, 667
HpyCH4III	ACNGT	3 cut(s)	130, 232, 350
HpyCH4V	TGCA	2 cut(s)	223, 419
HpyF10VI	GCNNNNNNNGC	2 cut(s)	330, 425
Hsp92II	CATG	3 cut(s)	148, 285, 375
HspAI	GCGC	1 cut(s)	426
KpnI	GGTACC	1 cut(s)	20
Kzo9I	GATC	1 cut(s)	46
LguI	GCTCTTC	1 cut(s)	715
LpnPI	CCDG	7 cut(s)	6, 33, 155, 281, 362, 536, 554
MaeI	CTAG	2 cut(s)	326, 470
MaeIII	GTNAC	1 cut(s)	380
MalI	GATC	1 cut(s)	48
MboI	GATC	1 cut(s)	46
MboII	GAAGA	2 cut(s)	114, 702
MflI	RGATCY	1 cut(s)	46
MluCI	AATT	5 cut(s)	195, 460, 681, 718, 731
MlyI	GAGTC	3 cut(s)	454, 498, 556
MmeI	TCCRAC	1 cut(s)	437
MnlI	CCTC	7 cut(s)	62, 228, 256, 355, 428, 531, 587
MseI	TTAA	3 cut(s)	35, 42, 341
MspCI	CTTAAG	1 cut(s)	34
MspR9I	CCNGG	1 cut(s)	21
MvaI	CCWGG	1 cut(s)	21
MwoI	GCNNNNNNNGC	2 cut(s)	330, 425
NcoI	CCATGG	1 cut(s)	144
NdeII	GATC	1 cut(s)	46
NlaIII	CATG	3 cut(s)	148, 285, 375
NlaIV	GGNNCC	3 cut(s)	18, 521, 645
NmuCI	GTSAC	1 cut(s)	380
PaeR7I	CTCGAG	1 cut(s)	535
PciSI	GCTCTTC	1 cut(s)	715
PfeI	GAWTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	515
PleI	GAGTC	3 cut(s)	453, 497, 555
PpsI	GAGTC	3 cut(s)	453, 497, 555
PshBI	ATTAAT	1 cut(s)	341
Psp6I	CCWGG	1 cut(s)	19
PspGI	CCWGG	1 cut(s)	19
PspN4I	GGNNCC	3 cut(s)	18, 521, 645
PspPI	GGNCC	4 cut(s)	215, 265, 520, 596
PspXI	VCTCGAGB	1 cut(s)	535
PsuI	RGATCY	1 cut(s)	46
RsaI	GTAC	2 cut(s)	18, 191
RsaNI	GTAC	2 cut(s)	17, 190
SapI	GCTCTTC	1 cut(s)	715
SaqAI	TTAA	3 cut(s)	35, 42, 341
Sau3AI	GATC	1 cut(s)	46
Sau96I	GGNCC	4 cut(s)	215, 265, 520, 596
SchI	GAGTC	3 cut(s)	454, 498, 556
ScrFI	CCNGG	1 cut(s)	21
SetI	ASST	9 cut(s)	73, 119, 254, 542, 568, 678, 690, 706, 744
Sfr274I	CTCGAG	1 cut(s)	535
SinI	GGWCC	4 cut(s)	215, 265, 520, 596
SlaI	CTCGAG	1 cut(s)	535
SmlI	CTYRAG	2 cut(s)	34, 535
SmoI	CTYRAG	2 cut(s)	34, 535
Sse9I	AATT	5 cut(s)	195, 460, 681, 718, 731
SsiI	CCGC	1 cut(s)	453
SspI	AATATT	1 cut(s)	668
SspMI	CTAG	2 cut(s)	326, 470
StyD4I	CCNGG	1 cut(s)	19
StyI	CCWWGG	2 cut(s)	144, 325
TaaI	ACNGT	3 cut(s)	130, 232, 350
TaqI	TCGA	2 cut(s)	288, 536
TaqII	GACCGA	1 cut(s)	203
TasI	AATT	5 cut(s)	195, 460, 681, 718, 731
TfiI	GAWTC	1 cut(s)	110
Tru1I	TTAA	3 cut(s)	35, 42, 341
Tru9I	TTAA	3 cut(s)	35, 42, 341
TscAI	CASTG	2 cut(s)	435, 627
TseFI	GTSAC	1 cut(s)	380
Tsp45I	GTSAC	1 cut(s)	380
TspDTI	ATGAA	2 cut(s)	602, 710
TspGWI	ACGGA	1 cut(s)	231
TspRI	CASTG	2 cut(s)	435, 627
Van91I	CCANNNNNTGG	1 cut(s)	515
Vha464I	CTTAAG	1 cut(s)	34
VpaK11BI	GGWCC	4 cut(s)	215, 265, 520, 596
VspI	ATTAAT	1 cut(s)	341
XapI	RAATTY	2 cut(s)	195, 460
XhoI	CTCGAG	1 cut(s)	535
XmaJI	CCTAGG	1 cut(s)	325
XmiI	GTMKAC	1 cut(s)	738
XspI	CTAG	2 cut(s)	326, 470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.