AT5G59590

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000714
Physical Location & Seq
Reverse (-)
24008865 .. 24010688
1824 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59590.1

Sequence Viewer

Length: 1350 bp
ATGGAGGAAAAGCAAGTGAAGGAGACAAGGATAGTGTTGGTTCCAGTTCCAGCTCAAGGTCATGTAACTCCGATGATGCAACTAGGAAAAGCTCTTCACTCAAAGGGTTTCTCCATCACTGTTGTTCTGACACAGTCTAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTCCATTTCCTCACCATCCCAGGCAGCTTAACTGAGTCTGATCTCCAAAACCTAGGACCACAAAAGTTTGTGCTCAAGCTCAATCAAATTTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAACTATTGCATGAACAATGTAATAATGATATTGCTTGTGTCGTCTACGATGAGTACATGTACTTCTCTCATGCTGCAGTAAAAGAGTTTCAACTTCCTAGTGTCGTCTTTAGCACGACAAGTGCTACTGCTTTTGTCTGTCGCTCTGTTTTGTCTAGAGTCAACGCAGAGTCGTTCTTGATCGACATGAAAGATCCTGAAACACAAGACAAAGTATTTCCAGGGTTGCATCCTCTGAGGTACAAGGATCTACCAACTTCAGTATTTGGGCCAATAGAGAGTACGCTCAAGGTTTACAGTGAGACTGTGAACACTCGAACAGCTTCCGCTGTTATCATCAACTCAGCAAGCTGTTTAGAGAGCTCATCTTTGGCAAGGTTGCAACAACAACTGCAAGTTCCGGTGTATCCTATAGGCCCACTTCATATTACAGCTTCAGCGCCTTCTAGTTTACTAGAAGAAGACAGGAGTTGCGTTGAGTGGTTGAACAAGCAAAAATCAAATTCAGTTATTTACATAAGCTTGGGAAGCTTGGCTCTAATGGACACCAAAGACATGTTGGAGATGGCTTGGGGATTAAGTAATAGCAACCAACCTTTCTTATGGGTGGTCAGACCGGGCTCTATTCCGGGGTCAGAATGGACAGAGTCCTTACCAGAGGAATTCAATAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCTCCGCAGATGGAAGTTCTCAGACATCCTGCAGTAGGAGGGTTTTGGAGTCACTGTGGATGGAACTCAACAGTAGAGAGCATCGGGGAAGGAGTTCCGATGATATGTAGGCCTTTCACCGGGGATCAGAAAGTCAATGCGAGGTACTTAGAGAGAGTTTGGAGAATTGGGGTTCAATTGGAGGGAGATCTGGATAAAGAAACTGTGGAGAGAGCTGTAGAGTGGTTGCTTGTGGATGAAGAAGGAGCAGAAATGAGGAAGAGAGCCATTGACTTGAAAGAAAAGATTGAAACCTCTGTTAGAAGTGGAGGTTCCTCATGCAGCTCACTAGACGACTTTGTTAATTCCATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

449

Amino Acids

50.1

Weight (kDa)

5.36

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 10 - 239 1.2e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 255 - 412 8.1e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 336
AciI CCGC 2 cut(s) 618, 1001
AclWI GGATC 3 cut(s) 479, 546, 1128
AcsI RAATTY 3 cut(s) 258, 793, 953
AcuI CTGAAG 2 cut(s) 534, 711
AfaI GTAC 5 cut(s) 347, 353, 533, 574, 1142
AfiI CCNNNNNNNGG 3 cut(s) 56, 1031, 1115
AflIII ACRYGT 2 cut(s) 348, 846
AgsI TTSAA 7 cut(s) 277, 383, 778, 958, 1172, 1273, 1286
AjnI CCWGG 2 cut(s) 190, 511
Alw21I GWGCWC 2 cut(s) 246, 656
Alw26I GTCTC 2 cut(s) 17, 587
AlwI GGATC 3 cut(s) 479, 546, 1128
AoxI GGCC 3 cut(s) 560, 706, 1106
ApeKI GCWGC 3 cut(s) 195, 365, 1317
ApoI RAATTY 3 cut(s) 258, 793, 953
Asp700I GAANNNNTTC 2 cut(s) 613, 1089
AspA2I CCTAGG 1 cut(s) 223
AspLEI GCGC 1 cut(s) 733
AspS9I GGNCC 3 cut(s) 227, 560, 707
AsuC2I CCSGG 3 cut(s) 909, 921, 1117
AsuHPI GGTGA 2 cut(s) 175, 1105
AvaII GGWCC 1 cut(s) 227
AvrII CCTAGG 1 cut(s) 223
BanII GRGCYC 3 cut(s) 656, 914, 1000
BarI GAAGNNNNNNTAC 2 cut(s) 338, 370
BbsI GAAGAC 1 cut(s) 759
Bbv12I GWGCWC 2 cut(s) 246, 656
BbvI GCAGC 3 cut(s) 207, 352, 1329
BccI CCATC 5 cut(s) 122, 194, 850, 1000, 1050
BciT130I CCWGG 2 cut(s) 192, 513
BciVI GTATCC 1 cut(s) 708
BcnI CCSGG 3 cut(s) 909, 921, 1117
BcoDI GTCTC 2 cut(s) 17, 587
BfaI CTAG 7 cut(s) 83, 224, 390, 447, 738, 746, 1325
BfmI CTRYAG 4 cut(s) 366, 702, 1026, 1212
BfoI RGCGCY 1 cut(s) 734
BfuI GTATCC 1 cut(s) 708
BglII AGATCT 1 cut(s) 1183
BisI GCNGC 3 cut(s) 196, 366, 1318
BlnI CCTAGG 1 cut(s) 223
BlsI GCNGC 3 cut(s) 197, 367, 1319
Bme1390I CCNGG 5 cut(s) 192, 513, 909, 921, 1117
Bme18I GGWCC 1 cut(s) 227
BmgT120I GGNCC 3 cut(s) 227, 560, 707
BmiI GGNNCC 3 cut(s) 42, 999, 1309
BmrFI CCNGG 5 cut(s) 192, 513, 909, 921, 1117
BmsI GCATC 3 cut(s) 66, 529, 1086
BpiI GAAGAC 1 cut(s) 759
BpuEI CTTGAG 3 cut(s) 39, 230, 563
BpuMI CCSGG 3 cut(s) 909, 921, 1117
BsaJI CCNNGG 5 cut(s) 190, 223, 512, 920, 1116
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 2 cut(s) 1036, 1066
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 1031, 1115
Bse1I ACTGG 1 cut(s) 44
BseBI CCWGG 2 cut(s) 192, 513
BseDI CCNNGG 5 cut(s) 190, 223, 512, 920, 1116
BseGI GGATG 5 cut(s) 186, 520, 1021, 1061, 1237
BseLI CCNNNNNNNGG 3 cut(s) 56, 1031, 1115
BseMII CTCAG 4 cut(s) 195, 518, 648, 1030
BseNI ACTGG 1 cut(s) 44
BseXI GCAGC 3 cut(s) 207, 352, 1329
BshFI GGCC 3 cut(s) 562, 708, 1108
BsiHKAI GWGCWC 2 cut(s) 246, 656
BsiSI CCGG 4 cut(s) 692, 908, 920, 1116
BslI CCNNNNNNNGG 3 cut(s) 56, 1031, 1115
BsmAI GTCTC 2 cut(s) 17, 587
BsnI GGCC 3 cut(s) 562, 708, 1108
Bsp1286I GDGCHC 4 cut(s) 246, 656, 914, 1000
Bsp143I GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
BspACI CCGC 2 cut(s) 618, 1001
BspANI GGCC 3 cut(s) 562, 708, 1108
BspCNI CTCAG 4 cut(s) 196, 519, 647, 1029
BspLI GGNNCC 3 cut(s) 42, 999, 1309
BspMAI CTGCAG 2 cut(s) 370, 1030
BspPI GGATC 3 cut(s) 479, 546, 1128
BspQI GCTCTTC 2 cut(s) 99, 157
BsrI ACTGG 1 cut(s) 44
BssECI CCNNGG 5 cut(s) 190, 223, 512, 920, 1116
BssMI GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
BssT1I CCWWGG 1 cut(s) 223
Bst2UI CCWGG 2 cut(s) 192, 513
Bst4CI ACNGT 7 cut(s) 121, 135, 590, 598, 1052, 1069, 1201
Bst6I CTCTTC 3 cut(s) 99, 157, 1250
BstC8I GCNNGC 2 cut(s) 271, 640
BstDEI CTNAG 5 cut(s) 204, 527, 634, 1016, 1144
BstENI CCTNNNNNAGG 1 cut(s) 1029
BstF5I GGATG 5 cut(s) 186, 520, 1021, 1061, 1237
BstH2I RGCGCY 1 cut(s) 734
BstHHI GCGC 1 cut(s) 733
BstKTI GATC 6 cut(s) 214, 474, 487, 541, 1123, 1186
BstMAI GTCTC 2 cut(s) 17, 587
BstMBI GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
BstMWI GCNNNNNNNGC 1 cut(s) 819
BstNI CCWGG 2 cut(s) 192, 513
BstNSI RCATGY 2 cut(s) 352, 850
BstSCI CCNGG 5 cut(s) 190, 511, 907, 919, 1115
BstSFI CTRYAG 4 cut(s) 366, 702, 1026, 1212
BstV1I GCAGC 3 cut(s) 207, 352, 1329
BstV2I GAAGAC 1 cut(s) 759
BstX2I RGATCY 3 cut(s) 484, 538, 1183
BstYI RGATCY 3 cut(s) 484, 538, 1183
BsuI GTATCC 1 cut(s) 708
BsuRI GGCC 3 cut(s) 562, 708, 1108
BtsCI GGATG 5 cut(s) 186, 520, 1021, 1061, 1237
BtsI GCAGTG 1 cut(s) 287
BtsIMutI CAGTG 4 cut(s) 117, 287, 595, 1048
Cac8I GCNNGC 2 cut(s) 271, 640
CfoI GCGC 1 cut(s) 733
Cfr13I GGNCC 3 cut(s) 227, 560, 707
Csp6I GTAC 5 cut(s) 346, 352, 532, 573, 1141
CviAII CATG 8 cut(s) 62, 302, 349, 362, 478, 847, 1314, 1345
CviQI GTAC 5 cut(s) 346, 352, 532, 573, 1141
DdeI CTNAG 5 cut(s) 204, 527, 634, 1016, 1144
DpnI GATC 6 cut(s) 213, 473, 486, 540, 1122, 1185
DpnII GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
Eam1104I CTCTTC 3 cut(s) 99, 157, 1250
EarI CTCTTC 3 cut(s) 99, 157, 1250
Ecl136II GAGCTC 1 cut(s) 654
Eco130I CCWWGG 1 cut(s) 223
Eco147I AGGCCT 1 cut(s) 1108
Eco24I GRGCYC 3 cut(s) 656, 914, 1000
Eco47I GGWCC 1 cut(s) 227
Eco53kI GAGCTC 1 cut(s) 654
Eco57I CTGAAG 2 cut(s) 534, 711
EcoICRI GAGCTC 1 cut(s) 654
EcoNI CCTNNNNNAGG 1 cut(s) 1029
EcoRI GAATTC 1 cut(s) 953
EcoRII CCWGG 2 cut(s) 190, 511
EcoT14I CCWWGG 1 cut(s) 223
EcoT38I GRGCYC 3 cut(s) 656, 914, 1000
ErhI CCWWGG 1 cut(s) 223
FaeI CATG 8 cut(s) 65, 305, 352, 365, 481, 850, 1317, 1348
FatI CATG 8 cut(s) 61, 301, 348, 361, 477, 846, 1313, 1344
FblI GTMKAC 1 cut(s) 336
Fnu4HI GCNGC 3 cut(s) 196, 366, 1318
FokI GGATG 5 cut(s) 173, 507, 1008, 1068, 1244
FriOI GRGCYC 3 cut(s) 656, 914, 1000
Fsp4HI GCNGC 3 cut(s) 196, 366, 1318
FspBI CTAG 7 cut(s) 83, 224, 390, 447, 738, 746, 1325
GlaI GCGC 1 cut(s) 732
GluI GCNGC 3 cut(s) 196, 366, 1318
HaeII RGCGCY 1 cut(s) 734
HaeIII GGCC 3 cut(s) 562, 708, 1108
HapII CCGG 4 cut(s) 692, 908, 920, 1116
HhaI GCGC 1 cut(s) 733
Hin1II CATG 8 cut(s) 65, 305, 352, 365, 481, 850, 1317, 1348
Hin6I GCGC 1 cut(s) 731
HinP1I GCGC 1 cut(s) 731
HincII GTYRAC 2 cut(s) 293, 454
HindII GTYRAC 2 cut(s) 293, 454
HindIII AAGCTT 3 cut(s) 271, 811, 820
HinfI GANTC 5 cut(s) 206, 450, 461, 938, 1045
HpaII CCGG 4 cut(s) 692, 908, 920, 1116
HphI GGTGA 2 cut(s) 175, 1105
Hpy166II GTNNAC 6 cut(s) 293, 337, 454, 586, 601, 743
Hpy188III TCNNGA 4 cut(s) 447, 469, 488, 1187
Hpy8I GTNNAC 6 cut(s) 293, 337, 454, 586, 601, 743
HpyAV CCTTC 4 cut(s) 13, 744, 1079, 1232
HpyCH4III ACNGT 7 cut(s) 121, 135, 590, 598, 1052, 1069, 1201
HpyCH4V TGCA 8 cut(s) 79, 301, 368, 520, 673, 685, 1028, 1317
HpyF10VI GCNNNNNNNGC 1 cut(s) 819
HpyF3I CTNAG 5 cut(s) 204, 527, 634, 1016, 1144
Hsp92II CATG 8 cut(s) 65, 305, 352, 365, 481, 850, 1317, 1348
HspAI GCGC 1 cut(s) 731
Kzo9I GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
LguI GCTCTTC 2 cut(s) 99, 157
LmnI GCTCC 2 cut(s) 1003, 1241
Lsp1109I GCAGC 3 cut(s) 207, 352, 1329
LweI GCATC 3 cut(s) 66, 529, 1086
MaeI CTAG 7 cut(s) 83, 224, 390, 447, 738, 746, 1325
MaeIII GTNAC 3 cut(s) 64, 980, 1046
MalI GATC 6 cut(s) 213, 473, 486, 540, 1122, 1185
MboI GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
MboII GAAGA 6 cut(s) 86, 144, 761, 764, 1247, 1267
MfeI CAATTG 1 cut(s) 1172
MflI RGATCY 3 cut(s) 484, 538, 1183
MhlI GDGCHC 4 cut(s) 246, 656, 914, 1000
MluCI AATT 6 cut(s) 258, 793, 953, 1161, 1172, 1339
MlyI GAGTC 5 cut(s) 215, 459, 470, 947, 1054
MmeI TCCRAC 1 cut(s) 831
MroXI GAANNNNTTC 2 cut(s) 613, 1089
MseI TTAA 3 cut(s) 200, 869, 1338
MspA1I CMGCKG 1 cut(s) 620
MspI CCGG 4 cut(s) 692, 908, 920, 1116
MspR9I CCNGG 5 cut(s) 192, 513, 909, 921, 1117
MunI CAATTG 1 cut(s) 1172
MvaI CCWGG 2 cut(s) 192, 513
MwoI GCNNNNNNNGC 1 cut(s) 819
NciI CCSGG 3 cut(s) 909, 921, 1117
NdeII GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
NlaIII CATG 8 cut(s) 65, 305, 352, 365, 481, 850, 1317, 1348
NlaIV GGNNCC 3 cut(s) 42, 999, 1309
NmuCI GTSAC 1 cut(s) 1046
NspI RCATGY 2 cut(s) 352, 850
PceI AGGCCT 1 cut(s) 1108
PciI ACATGT 2 cut(s) 348, 846
PciSI GCTCTTC 2 cut(s) 99, 157
PdmI GAANNNNTTC 2 cut(s) 613, 1089
PflFI GACNNNGTC 2 cut(s) 133, 937
PkrI GCNGC 3 cut(s) 197, 367, 1319
PleI GAGTC 5 cut(s) 214, 458, 469, 946, 1053
PpsI GAGTC 5 cut(s) 214, 458, 469, 946, 1053
PscI ACATGT 2 cut(s) 348, 846
Psp124BI GAGCTC 1 cut(s) 656
Psp6I CCWGG 2 cut(s) 190, 511
PspGI CCWGG 2 cut(s) 190, 511
PspN4I GGNNCC 3 cut(s) 42, 999, 1309
PspPI GGNCC 3 cut(s) 227, 560, 707
PstI CTGCAG 2 cut(s) 370, 1030
PsuI RGATCY 3 cut(s) 484, 538, 1183
PsyI GACNNNGTC 2 cut(s) 133, 937
RsaI GTAC 5 cut(s) 347, 353, 533, 574, 1142
RsaNI GTAC 5 cut(s) 346, 352, 532, 573, 1141
SacI GAGCTC 1 cut(s) 656
SapI GCTCTTC 2 cut(s) 99, 157
SaqAI TTAA 3 cut(s) 200, 869, 1338
SatI GCNGC 3 cut(s) 196, 366, 1318
Sau3AI GATC 6 cut(s) 211, 471, 484, 538, 1120, 1183
Sau96I GGNCC 3 cut(s) 227, 560, 707
SchI GAGTC 5 cut(s) 215, 459, 470, 947, 1054
ScrFI CCNGG 5 cut(s) 192, 513, 909, 921, 1117
SduI GDGCHC 4 cut(s) 246, 656, 914, 1000
SfaNI GCATC 3 cut(s) 66, 529, 1086
SfcI CTRYAG 4 cut(s) 366, 702, 1026, 1212
SinI GGWCC 1 cut(s) 227
SmlI CTYRAG 3 cut(s) 54, 245, 578
SmoI CTYRAG 3 cut(s) 54, 245, 578
Sse9I AATT 6 cut(s) 258, 793, 953, 1161, 1172, 1339
SseBI AGGCCT 1 cut(s) 1108
SsiI CCGC 2 cut(s) 618, 1001
SspMI CTAG 7 cut(s) 83, 224, 390, 447, 738, 746, 1325
SstI GAGCTC 1 cut(s) 656
StuI AGGCCT 1 cut(s) 1108
StyD4I CCNGG 5 cut(s) 190, 511, 907, 919, 1115
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 7 cut(s) 121, 135, 590, 598, 1052, 1069, 1201
TaqI TCGA 3 cut(s) 142, 474, 607
TasI AATT 6 cut(s) 258, 793, 953, 1161, 1172, 1339
TatI WGTACW 2 cut(s) 345, 351
Tru1I TTAA 3 cut(s) 200, 869, 1338
Tru9I TTAA 3 cut(s) 200, 869, 1338
TscAI CASTG 4 cut(s) 124, 287, 595, 1055
TseFI GTSAC 1 cut(s) 1046
TseI GCWGC 3 cut(s) 195, 365, 1317
Tsp45I GTSAC 1 cut(s) 1046
TspDTI ATGAA 4 cut(s) 318, 494, 704, 1248
TspRI CASTG 4 cut(s) 124, 287, 595, 1055
Tth111I GACNNNGTC 2 cut(s) 133, 937
VpaK11BI GGWCC 1 cut(s) 227
XagI CCTNNNNNAGG 1 cut(s) 1029
XapI RAATTY 3 cut(s) 258, 793, 953
XbaI TCTAGA 1 cut(s) 446
XceI RCATGY 2 cut(s) 352, 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 847
XmaJI CCTAGG 1 cut(s) 223
XmiI GTMKAC 1 cut(s) 336
XmnI GAANNNNTTC 2 cut(s) 613, 1089
XspI CTAG 7 cut(s) 83, 224, 390, 447, 738, 746, 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.