Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000714

Physical Location & Seq

Genomic Coordinates Forward (+)

640411 .. 645339

Gene Structure 4929 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G007700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGAAAAGAAAACACAGAGCTGTAAAAGGTTGGTTTTAGTCCCATGTCCATACCAAGGCCATATAAATCCAATGCTTCAGCTTGGTACCTTCCTTCACTCAAAGGGTTTTTCGATCACAATTGTTCACACTCATTTCAACTCTCCCAACCCTTCAAACCACCCTGAATTCACCTTCCTTCCGATACCAGATGGCCTCACTGAACACGAAATTTTGTCTGGGAATTTAGTAGCTATTCTGTTGGCTCTTAATGCCAATTGCAAAGCAAGCTTCCAGCAATGCTTGACTCAACTGATGGAGCAAGAACCACAGAACAGCATTAGCATCATCTATGATGACATCATGTACTTCTCTGAAGCTGTGGCTAATTATCTGAACATTCCAAGCATCGTCTTACGCACTGTCAGCATTACCAATTTTATTGCCCGCAGCACTGTCCTACAACTTCTTTCGAAAGGTTCCTTTCCCTTCCCAGAATCTATGTCACGGAACCCGGTTCCCGACCTTGATCCCCTCAGGTTCAAGGATCTTCCCATCTCCAACTTTGACACATATGAGAACTATTCAAAACTAGTAGTTAATTTACACAATGTCAGGACATCCTCAGCCGTCATTTGGAACACTGTGGACTGCCTTGAACAATCATCACTGGCACAGATCCAGCAACAATGTCAAGTTCCAATCTTCACCATAGGTCCTCTTCACAAGATTGCAACAGCAGCTTCAACTAGTTTACTAGAAGAGGACATGGGATGCATTGCGTGGCTTGACAAGCAATCCCACAACTCAGTTATCTATGTAAGCTTGGGAAGTGTAGCATCCATTAGTGAGAAAGAACTAGCTGAGATGGCTTGGGGGTTAGCTAAGAGCAAGCAACCTTTCCTGTGGGTGATCAGGCCCGGATCAATTTGTGGTTCTGATTGGATTGAGCTATTGCCTCAAGGTTTCATAGAAGCTATTGGAGAAAAAGGTTGCATTGTGAAATGGGCACCCCAGAGGCAAGTTCTGGCGCATGACGCGGTGGGTGGGTTTTGGAGCCATTGCGGCTGGAATTCAACGCTGGAAAGTTTATCAGAAGGGGTTCCGATGATATGTTGGCCGTGTTTTAGCGATCAGAAGGTGCATGCAAGGTATGTGAGCCAAGTATGTAAAATAGGGATACAACTGGAGAATGAATTAGAGAGGGGAGAGATAGAGAGAGCTGTTAGAAAACTTATGGTAGATGATGATGGGAAGGGAATCAGGGCGAGGGCCAAGGAATTGAAGGAGAAAATAGAAGTTAGTATGAAGGGTGGCTCTTCCTACCATTGCTTGAATGAGCTTGTGAAGCTTATAAGGTCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0047254 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204

Pfam Domains

Protein Families

UDPGT

Protein Analysis

449

Amino Acids

50.04

Weight (kDa)

6.13

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26480 AT3G46650 AT3G46660 AT3G46670 AT3G46680 AT3G46690 AT3G46700 AT3G46720 AT5G05860 AT5G05870 AT5G37950 AT5G37950 AT5G38010 AT5G38040 AT5G59580 AT5G59590
fragaria_vesca	FvH4_3g37270 FvH4_3g37280 FvH4_3g37280 FvH4_3g37310
malus_domestica	MD00G1075200.v1.1 MD03G1081900.v1.1 MD03G1082100.v1.1 MD03G1082200.v1.1 MD03G1082400.v1.1 MD03G1082500.v1.1 MD11G1090200.v1.1 MD11G1090300.v1.1 MD11G1090500.v1.1
prunus_persica	Prupe.6G007700_v2.0.a1 Prupe.6G007700_v2.0.a1 Prupe.6G007800_v2.0.a1 Prupe.6G008000_v2.0.a1 Prupe.6G008200_v2.0.a1 Prupe.6G008300_v2.0.a1 Prupe.6G008400_v2.0.a1 Prupe.6G008600_v2.0.a1 Prupe.6G008700_v2.0.a1
pyrus_communis	pycom03g06530 pycom03g06540 pycom03g06550 pycom03g06570 pycom11g07520
rosa_chinensis	RchiOBHm_Chr4g0431001 RchiOBHm_Chr5g0067011 RchiOBHm_Chr5g0067091
rosa_laevigata	RLG00000035904 RLG00000035909 RLG00000035911
rosa_multiflora	Rmu_sc0000151.1_g000012 Rmu_sc0000151.1_g000013 Rmu_sc0006583.1_g000015
rosa_roxburghii	Rroxscaffold_1G00013980 Rroxscaffold_1G00014100
rosa_rugosa	Rorug05G0380800 Rorug05G0381400 Rorug05G0381600 Rorug05G0381700 Rorug05G0381700
rosa_samantha	Rh5AG440700 Rh5AG441400 Rh5BG457900 Rh5BG458600 Rh5BG458700 Rh5CG480800 Rh5CG480900 Rh5DG472900 Rh5DG473400 Rh5DG473600
rosa_wichuraiana	Rw4G026410 Rw5G041180 Rw5G041230 Rw5G041240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1334
Acc65I	GGTACC	1 cut(s)	86
AccB1I	GGYRCC	2 cut(s)	86, 988
AccII	CGCG	1 cut(s)	1019
AciI	CCGC	3 cut(s)	427, 1019, 1044
AclWI	GGATC	4 cut(s)	503, 534, 652, 910
AcoI	YGGCCR	1 cut(s)	1097
AcsI	RAATTY	4 cut(s)	167, 210, 223, 1051
AcuI	CTGAAG	2 cut(s)	62, 375
AfaI	GTAC	2 cut(s)	88, 347
AfiI	CCNNNNNNNGG	2 cut(s)	56, 615
AgsI	TTSAA	9 cut(s)	139, 156, 523, 567, 638, 726, 1056, 1264, 1315
AhlI	ACTAGT	2 cut(s)	571, 728
AlwI	GGATC	4 cut(s)	503, 534, 652, 910
AoxI	GGCC	5 cut(s)	58, 193, 896, 1097, 1251
ApeKI	GCWGC	2 cut(s)	429, 719
ApoI	RAATTY	4 cut(s)	167, 210, 223, 1051
Asp700I	GAANNNNTTC	1 cut(s)	1080
Asp718I	GGTACC	1 cut(s)	86
AspLEI	GCGC	1 cut(s)	1012
AspS9I	GGNCC	3 cut(s)	695, 897, 1251
AsuC2I	CCSGG	2 cut(s)	494, 900
AsuHPI	GGTGA	3 cut(s)	163, 679, 901
AsuII	TTCGAA	1 cut(s)	452
AvaII	GGWCC	1 cut(s)	695
AxyI	CCTNAGG	1 cut(s)	515
BaeGI	GKGCMC	1 cut(s)	991
BanI	GGYRCC	2 cut(s)	86, 988
BbvCI	CCTCAGC	1 cut(s)	604
BbvI	GCAGC	2 cut(s)	441, 731
BccI	CCATC	5 cut(s)	185, 289, 542, 841, 1223
BceAI	ACGGC	2 cut(s)	593, 1084
BciVI	GTATCC	1 cut(s)	1152
BclI	TGATCA	1 cut(s)	891
BcnI	CCSGG	2 cut(s)	494, 900
BcuI	ACTAGT	2 cut(s)	571, 728
BfaI	CTAG	4 cut(s)	572, 729, 737, 839
BfuI	GTATCC	1 cut(s)	1152
BglI	GCCNNNNNGGC	1 cut(s)	1044
BisI	GCNGC	3 cut(s)	430, 720, 1045
BlsI	GCNGC	3 cut(s)	431, 721, 1046
Bme1390I	CCNGG	2 cut(s)	494, 900
Bme18I	GGWCC	1 cut(s)	695
BmgT120I	GGNCC	3 cut(s)	695, 897, 1251
BmiI	GGNNCC	7 cut(s)	88, 460, 491, 498, 990, 1037, 1083
BmrFI	CCNGG	2 cut(s)	494, 900
BmsI	GCATC	4 cut(s)	333, 396, 743, 827
BpmI	CTGGAG	1 cut(s)	1187
Bpu10I	CCTNAGC	1 cut(s)	604
Bpu14I	TTCGAA	1 cut(s)	452
BpuEI	CTTGAG	1 cut(s)	924
BpuMI	CCSGG	2 cut(s)	494, 900
BsaJI	CCNNGG	2 cut(s)	55, 1254
Bsc4I	CCNNNNNNNGG	2 cut(s)	56, 615
Bse1I	ACTGG	2 cut(s)	654, 1170
Bse21I	CCTNAGG	1 cut(s)	515
Bse3DI	GCAATG	4 cut(s)	284, 756, 1039, 1306
BseDI	CCNNGG	2 cut(s)	55, 1254
BseGI	GGATG	3 cut(s)	599, 758, 818
BseLI	CCNNNNNNNGG	2 cut(s)	56, 615
BseMI	GCAATG	4 cut(s)	284, 756, 1039, 1306
BseMII	CTCAG	4 cut(s)	529, 618, 801, 834
BseNI	ACTGG	2 cut(s)	654, 1170
BseSI	GKGCMC	1 cut(s)	991
BseXI	GCAGC	2 cut(s)	441, 731
Bsh1236I	CGCG	1 cut(s)	1019
BshFI	GGCC	5 cut(s)	60, 195, 898, 1099, 1253
BshNI	GGYRCC	2 cut(s)	86, 988
BsiSI	CCGG	2 cut(s)	494, 900
BslFI	GGGAC	1 cut(s)	26
BslI	CCNNNNNNNGG	2 cut(s)	56, 615
BsmFI	GGGAC	1 cut(s)	26
BsnI	GGCC	5 cut(s)	60, 195, 898, 1099, 1253
Bsp119I	TTCGAA	1 cut(s)	452
Bsp1286I	GDGCHC	1 cut(s)	991
Bsp143I	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
BspACI	CCGC	3 cut(s)	427, 1019, 1044
BspANI	GGCC	5 cut(s)	60, 195, 898, 1099, 1253
BspCNI	CTCAG	4 cut(s)	528, 617, 800, 835
BspFNI	CGCG	1 cut(s)	1019
BspLI	GGNNCC	7 cut(s)	88, 460, 491, 498, 990, 1037, 1083
BspPI	GGATC	4 cut(s)	503, 534, 652, 910
BspQI	GCTCTTC	1 cut(s)	1303
BspT104I	TTCGAA	1 cut(s)	452
BspT107I	GGYRCC	2 cut(s)	86, 988
BsrDI	GCAATG	4 cut(s)	284, 756, 1039, 1306
BsrI	ACTGG	2 cut(s)	654, 1170
BssECI	CCNNGG	2 cut(s)	55, 1254
BssMI	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
BssT1I	CCWWGG	2 cut(s)	55, 1254
Bst4CI	ACNGT	3 cut(s)	403, 436, 625
Bst6I	CTCTTC	3 cut(s)	705, 735, 1303
BstBI	TTCGAA	1 cut(s)	452
BstC8I	GCNNGC	4 cut(s)	268, 427, 872, 1125
BstDEI	CTNAG	5 cut(s)	515, 604, 787, 843, 864
BstF5I	GGATG	3 cut(s)	599, 758, 818
BstFNI	CGCG	1 cut(s)	1019
BstHHI	GCGC	1 cut(s)	1012
BstKTI	GATC	7 cut(s)	117, 511, 529, 660, 894, 905, 1114
BstMBI	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
BstMWI	GCNNNNNNNGC	9 cut(s)	251, 267, 405, 719, 772, 848, 1016, 1044, 1327
BstNSI	RCATGY	1 cut(s)	1127
BstSCI	CCNGG	2 cut(s)	492, 898
BstSLI	GKGCMC	1 cut(s)	991
BstUI	CGCG	1 cut(s)	1019
BstV1I	GCAGC	2 cut(s)	441, 731
BstX2I	RGATCY	2 cut(s)	526, 657
BstYI	RGATCY	2 cut(s)	526, 657
Bsu36I	CCTNAGG	1 cut(s)	515
BsuI	GTATCC	1 cut(s)	1152
BsuRI	GGCC	5 cut(s)	60, 195, 898, 1099, 1253
BtsCI	GGATG	3 cut(s)	599, 758, 818
BtsIMutI	CAGTG	5 cut(s)	198, 399, 432, 621, 647
Cac8I	GCNNGC	4 cut(s)	268, 427, 872, 1125
CfoI	GCGC	1 cut(s)	1012
Cfr13I	GGNCC	3 cut(s)	695, 897, 1251
CseI	GACGC	1 cut(s)	1025
Csp6I	GTAC	2 cut(s)	87, 346
CviAII	CATG	5 cut(s)	45, 343, 748, 1013, 1124
CviQI	GTAC	2 cut(s)	87, 346
DdeI	CTNAG	5 cut(s)	515, 604, 787, 843, 864
DpnI	GATC	7 cut(s)	116, 510, 528, 659, 893, 904, 1113
DpnII	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
EaeI	YGGCCR	1 cut(s)	1097
Eam1104I	CTCTTC	3 cut(s)	705, 735, 1303
EarI	CTCTTC	3 cut(s)	705, 735, 1303
Eco130I	CCWWGG	2 cut(s)	55, 1254
Eco47I	GGWCC	1 cut(s)	695
Eco57I	CTGAAG	2 cut(s)	62, 375
Eco81I	CCTNAGG	1 cut(s)	515
EcoO109I	RGGNCCY	1 cut(s)	695
EcoRI	GAATTC	2 cut(s)	167, 1051
EcoT14I	CCWWGG	2 cut(s)	55, 1254
EcoT22I	ATGCAT	1 cut(s)	758
ErhI	CCWWGG	2 cut(s)	55, 1254
FaeI	CATG	5 cut(s)	48, 346, 751, 1016, 1127
FaqI	GGGAC	1 cut(s)	26
FatI	CATG	5 cut(s)	44, 342, 747, 1012, 1123
FauI	CCCGC	1 cut(s)	434
FauNDI	CATATG	1 cut(s)	553
FbaI	TGATCA	1 cut(s)	891
Fnu4HI	GCNGC	3 cut(s)	430, 720, 1045
FokI	GGATG	3 cut(s)	586, 765, 805
Fsp4HI	GCNGC	3 cut(s)	430, 720, 1045
FspBI	CTAG	4 cut(s)	572, 729, 737, 839
GlaI	GCGC	1 cut(s)	1011
GluI	GCNGC	3 cut(s)	430, 720, 1045
GsuI	CTGGAG	1 cut(s)	1187
HaeIII	GGCC	5 cut(s)	60, 195, 898, 1099, 1253
HapII	CCGG	2 cut(s)	494, 900
HgaI	GACGC	1 cut(s)	1025
HhaI	GCGC	1 cut(s)	1012
Hin1II	CATG	5 cut(s)	48, 346, 751, 1016, 1127
Hin6I	GCGC	1 cut(s)	1010
HinP1I	GCGC	1 cut(s)	1010
HindIII	AAGCTT	3 cut(s)	268, 802, 1328
HinfI	GANTC	3 cut(s)	286, 476, 1239
HpaII	CCGG	2 cut(s)	494, 900
HphI	GGTGA	3 cut(s)	163, 679, 901
Hpy166II	GTNNAC	3 cut(s)	127, 628, 734
Hpy188I	TCNGA	7 cut(s)	183, 355, 375, 919, 1075, 1086, 1116
Hpy188III	TCNNGA	2 cut(s)	500, 595
Hpy8I	GTNNAC	3 cut(s)	127, 628, 734
HpyCH4III	ACNGT	3 cut(s)	403, 436, 625
HpyCH4V	TGCA	6 cut(s)	261, 713, 756, 975, 1123, 1127
HpyF10VI	GCNNNNNNNGC	9 cut(s)	251, 267, 405, 719, 772, 848, 1016, 1044, 1327
HpyF3I	CTNAG	5 cut(s)	515, 604, 787, 843, 864
Hsp92II	CATG	5 cut(s)	48, 346, 751, 1016, 1127
HspAI	GCGC	1 cut(s)	1010
KpnI	GGTACC	1 cut(s)	90
Ksp22I	TGATCA	1 cut(s)	891
Kzo9I	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
LguI	GCTCTTC	1 cut(s)	1303
LmnI	GCTCC	2 cut(s)	298, 1035
Lsp1109I	GCAGC	2 cut(s)	441, 731
LweI	GCATC	4 cut(s)	333, 396, 743, 827
MaeI	CTAG	4 cut(s)	572, 729, 737, 839
MaeIII	GTNAC	1 cut(s)	483
MalI	GATC	7 cut(s)	116, 510, 528, 659, 893, 904, 1113
MboI	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
MboII	GAAGA	5 cut(s)	521, 676, 692, 752, 1290
MfeI	CAATTG	2 cut(s)	120, 256
MflI	RGATCY	2 cut(s)	526, 657
MhlI	GDGCHC	1 cut(s)	991
MlyI	GAGTC	1 cut(s)	280
MmeI	TCCRAC	1 cut(s)	564
MnlI	CCTC	9 cut(s)	206, 524, 613, 708, 736, 948, 990, 1176, 1242
Mph1103I	ATGCAT	1 cut(s)	758
MroXI	GAANNNNTTC	1 cut(s)	1080
MseI	TTAA	2 cut(s)	249, 579
MspI	CCGG	2 cut(s)	494, 900
MspR9I	CCNGG	2 cut(s)	494, 900
MunI	CAATTG	2 cut(s)	120, 256
MvnI	CGCG	1 cut(s)	1019
MwoI	GCNNNNNNNGC	9 cut(s)	251, 267, 405, 719, 772, 848, 1016, 1044, 1327
NciI	CCSGG	2 cut(s)	494, 900
NdeI	CATATG	1 cut(s)	553
NdeII	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
NlaIII	CATG	5 cut(s)	48, 346, 751, 1016, 1127
NlaIV	GGNNCC	7 cut(s)	88, 460, 491, 498, 990, 1037, 1083
NmuCI	GTSAC	1 cut(s)	483
NsiI	ATGCAT	1 cut(s)	758
NspI	RCATGY	1 cut(s)	1127
NspV	TTCGAA	1 cut(s)	452
PaeI	GCATGC	1 cut(s)	1127
PciSI	GCTCTTC	1 cut(s)	1303
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	2 cut(s)	476, 1239
PkrI	GCNGC	3 cut(s)	431, 721, 1046
PleI	GAGTC	1 cut(s)	280
PpsI	GAGTC	1 cut(s)	280
PpuMI	RGGWCCY	1 cut(s)	695
PsiI	TTATAA	1 cut(s)	1334
Psp5II	RGGWCCY	1 cut(s)	695
PspN4I	GGNNCC	7 cut(s)	88, 460, 491, 498, 990, 1037, 1083
PspPI	GGNCC	3 cut(s)	695, 897, 1251
PspPPI	RGGWCCY	1 cut(s)	695
PsuI	RGATCY	2 cut(s)	526, 657
RsaI	GTAC	2 cut(s)	88, 347
RsaNI	GTAC	2 cut(s)	87, 346
SapI	GCTCTTC	1 cut(s)	1303
SaqAI	TTAA	2 cut(s)	249, 579
SatI	GCNGC	3 cut(s)	430, 720, 1045
Sau3AI	GATC	7 cut(s)	114, 508, 526, 657, 891, 902, 1111
Sau96I	GGNCC	3 cut(s)	695, 897, 1251
SchI	GAGTC	1 cut(s)	280
ScrFI	CCNGG	2 cut(s)	494, 900
SduI	GDGCHC	1 cut(s)	991
SfaNI	GCATC	4 cut(s)	333, 396, 743, 827
SfuI	TTCGAA	1 cut(s)	452
SinI	GGWCC	1 cut(s)	695
SmlI	CTYRAG	1 cut(s)	939
SmoI	CTYRAG	1 cut(s)	939
SpeI	ACTAGT	2 cut(s)	571, 728
SphI	GCATGC	1 cut(s)	1127
SsiI	CCGC	3 cut(s)	427, 1019, 1044
SspMI	CTAG	4 cut(s)	572, 729, 737, 839
StyD4I	CCNGG	2 cut(s)	492, 898
StyI	CCWWGG	2 cut(s)	55, 1254
TaaI	ACNGT	3 cut(s)	403, 436, 625
TaqI	TCGA	2 cut(s)	113, 452
TatI	WGTACW	1 cut(s)	345
TauI	GCSGC	1 cut(s)	1047
TfiI	GAWTC	2 cut(s)	476, 1239
Tru1I	TTAA	2 cut(s)	249, 579
Tru9I	TTAA	2 cut(s)	249, 579
TscAI	CASTG	5 cut(s)	205, 406, 439, 628, 654
TseFI	GTSAC	1 cut(s)	483
TseI	GCWGC	2 cut(s)	429, 719
Tsp45I	GTSAC	1 cut(s)	483
TspDTI	ATGAA	3 cut(s)	937, 1188, 1301
TspGWI	ACGGA	1 cut(s)	502
TspRI	CASTG	5 cut(s)	205, 406, 439, 628, 654
VpaK11BI	GGWCC	1 cut(s)	695
XapI	RAATTY	4 cut(s)	167, 210, 223, 1051
XceI	RCATGY	1 cut(s)	1127
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	4 cut(s)	572, 729, 737, 839
Zsp2I	ATGCAT	1 cut(s)	758

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.