AT3G46700

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000714
Physical Location & Seq
Reverse (-)
17200167 .. 17202074
1908 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46700.1

Sequence Viewer

Length: 1344 bp
ATGGAGAAAAGAGTAGAGAAGAGAAGGATAGTGTTGGTTCCACTTCCATTACTAGGACATTTCACTCCGATGATGCAACTCGGCCAAGCCCTTATCTTGAAGGGATTCTCAATTATAGTTCCTCAGGGAGAATTCAATCGAGTAAACTCTTCGCAGAAGTTCCCTGGTTTTCAATTTATCACCATACCAGATTCTGAACTCGAGGCAAATGGACCAGTCGGGTCTCTAACACAGCTCAACAAAATTATGGAGGCAAGCTTCAAGGACTGTATAAGGCAGTTGTTGAAACAACAAGGCAATGATATTGCATGTATCATCTACGACGAGTTCATGTATTTTTGTGGAGCCGTAGCTGAGGAGTTGAAGCTTCCCAATTTCATCTTCAGTACTCAAACTGCTACACATAAAGTTTGCTGCAATGTTTTAAGCAAACTTAATGCCAAGAAGTACTTGATCGACATGGAAGAGCATGACGTGCAAAACAAGGTAGTGGAAAATATGCATCCATTAAGATACAAAGACTTACCAACTGCAACATTTGGAGAACTAGAACCTTTTTTGGAGCTCTGTAGAGATGTAGTCAACAAAAGAACAGCCTCTGCTGTTATCATCAACACCGTGACCTGTCTAGAGAGCTCGTCTCTCACAAGGCTGCAACAAGAACTCCAAATTCCGGTGTATCCATTAGGCCCTCTTCACATTACAGATTCATCGACAGGATTTACTGTGCTGCAAGAGGATAGGAGCTGCGTTGAATGGCTGAACAAGCAGAAACCAAGGTCTGTCATATACATAAGTTTAGGAAGCATGGTTCTCATGGAAACCAAGGAGATGTTAGAGATGGCTTGGGGAATGTTGAATAGCAACCAACCTTTCTTATGGGTCATCCGACCTGGATCTGTCTCAGGCTCCGAGGGGATAGAGTCATTGCCAGAGGAAGTCAGTAAGATGGTTTTAGAGAAAGGATACATTGTGAAATGGGCACCACAAATAGAAGTACTAGGACATCCCTCAGTGGGAGGCTTTTGGAGCCACTGTGGATGGAACTCAACACTCGAGAGCATTGTGGAAGGAGTTCCAATGATTTGCAGGCCTTATCAAGGCGAGCAGATGTTAAATGCAATATATCTAGAGAGTGTATGGAGAATAGGGATTCAGGTAGGAGGTGAACTGGAAAGAGGAGCCGTCGAGAGAGCTGTGAAGAGGTTGATTGTGGATAAAGAAGGTGCAAGCATGAGGGAGAGAACCCTTGTTTTAAAAGAGAAGCTCAAAGCCTCTATTAGAGGTGGAGGCTCCTCATGCAATGCATTAGATGAGCTTGTCAAGCACTTGAAGACAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

447

Amino Acids

50.19

Weight (kDa)

6.15

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 237 - 407 6.2e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 982
AclWI GGATC 1 cut(s) 904
AcoI YGGCCR 1 cut(s) 82
AcsI RAATTY 2 cut(s) 131, 669
AcuI CTGAAG 1 cut(s) 367
AfaI GTAC 3 cut(s) 388, 449, 999
AfiI CCNNNNNNNGG 4 cut(s) 53, 673, 1016, 1100
AgsI TTSAA 9 cut(s) 100, 136, 173, 262, 286, 364, 755, 859, 1333
AjiI CACGTC 1 cut(s) 475
AjnI CCWGG 2 cut(s) 163, 892
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AloI GAACNNNNNNTCC 2 cut(s) 795, 827
Alw21I GWGCWC 2 cut(s) 567, 638
Alw26I GTCTC 3 cut(s) 228, 645, 907
AlwI GGATC 1 cut(s) 904
AlwNI CAGNNNCTG 2 cut(s) 194, 599
Ama87I CYCGRG 2 cut(s) 200, 1055
AoxI GGCC 3 cut(s) 82, 688, 1091
ApeKI GCWGC 4 cut(s) 414, 652, 730, 747
ApoI RAATTY 2 cut(s) 131, 669
Asp700I GAANNNNTTC 2 cut(s) 104, 1074
AspS9I GGNCC 2 cut(s) 212, 689
AsuHPI GGTGA 2 cut(s) 172, 1178
AvaI CYCGRG 2 cut(s) 200, 1055
AvaII GGWCC 1 cut(s) 212
AxyI CCTNAGG 1 cut(s) 123
BaeGI GKGCMC 1 cut(s) 985
BanI GGYRCC 1 cut(s) 982
BanII GRGCYC 2 cut(s) 567, 638
BbsI GAAGAC 1 cut(s) 1340
Bbv12I GWGCWC 2 cut(s) 567, 638
BbvCI CCTCAGC 1 cut(s) 354
BbvI GCAGC 4 cut(s) 401, 639, 717, 734
BccI CCATC 3 cut(s) 835, 943, 1035
BceAI ACGGC 2 cut(s) 332, 1169
BciT130I CCWGG 2 cut(s) 165, 894
BciVI GTATCC 2 cut(s) 690, 959
BcoDI GTCTC 3 cut(s) 228, 645, 907
BfaI CTAG 5 cut(s) 53, 548, 629, 1001, 1130
BfmI CTRYAG 1 cut(s) 568
BfuI GTATCC 2 cut(s) 690, 959
BisI GCNGC 4 cut(s) 415, 653, 731, 748
BlsI GCNGC 4 cut(s) 416, 654, 732, 749
BmcAI AGTACT 3 cut(s) 388, 449, 999
Bme1390I CCNGG 2 cut(s) 165, 894
Bme18I GGWCC 1 cut(s) 212
BmeT110I CYCGRG 2 cut(s) 200, 1055
BmgBI CACGTC 1 cut(s) 475
BmgT120I GGNCC 2 cut(s) 212, 689
BmiI GGNNCC 7 cut(s) 39, 346, 910, 984, 1031, 1183, 1294
BmrFI CCNGG 2 cut(s) 165, 894
BmsI GCATC 2 cut(s) 63, 511
BpiI GAAGAC 1 cut(s) 1340
BplI GAGNNNNNCTC 2 cut(s) 625, 657
Bpu10I CCTNAGC 1 cut(s) 354
BsaI GGTCTC 1 cut(s) 228
BsaJI CCNNGG 4 cut(s) 163, 776, 825, 912
BsaWI WCCGGW 1 cut(s) 673
BsaXI ACNNNNNCTCC 4 cut(s) 648, 678, 1021, 1051
Bsc4I CCNNNNNNNGG 4 cut(s) 53, 673, 1016, 1100
Bse1I ACTGG 2 cut(s) 215, 1176
Bse21I CCTNAGG 1 cut(s) 123
Bse3DI GCAATG 4 cut(s) 304, 424, 926, 1309
BseBI CCWGG 2 cut(s) 165, 894
BseDI CCNNGG 4 cut(s) 163, 776, 825, 912
BseGI GGATG 4 cut(s) 502, 885, 1006, 1046
BseLI CCNNNNNNNGG 4 cut(s) 53, 673, 1016, 1100
BseMI GCAATG 4 cut(s) 304, 424, 926, 1309
BseMII CTCAG 4 cut(s) 137, 345, 918, 1026
BseNI ACTGG 2 cut(s) 215, 1176
BseRI GAGGAG 3 cut(s) 371, 1194, 1285
BseSI GKGCMC 1 cut(s) 985
BseXI GCAGC 4 cut(s) 401, 639, 717, 734
BshFI GGCC 3 cut(s) 84, 690, 1093
BshNI GGYRCC 1 cut(s) 982
BsiHKAI GWGCWC 2 cut(s) 567, 638
BsiHKCI CYCGRG 2 cut(s) 200, 1055
BsiSI CCGG 1 cut(s) 674
BslI CCNNNNNNNGG 4 cut(s) 53, 673, 1016, 1100
BsmAI GTCTC 3 cut(s) 228, 645, 907
BsmBI CGTCTC 1 cut(s) 645
BsnI GGCC 3 cut(s) 84, 690, 1093
Bso31I GGTCTC 1 cut(s) 228
BsoBI CYCGRG 2 cut(s) 200, 1055
Bsp1286I GDGCHC 3 cut(s) 567, 638, 985
Bsp143I GATC 2 cut(s) 453, 896
BspANI GGCC 3 cut(s) 84, 690, 1093
BspCNI CTCAG 4 cut(s) 136, 346, 917, 1025
BspLI GGNNCC 7 cut(s) 39, 346, 910, 984, 1031, 1183, 1294
BspPI GGATC 1 cut(s) 904
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 1 cut(s) 982
BspTNI GGTCTC 1 cut(s) 228
BsrDI GCAATG 4 cut(s) 304, 424, 926, 1309
BsrI ACTGG 2 cut(s) 215, 1176
BssECI CCNNGG 4 cut(s) 163, 776, 825, 912
BssMI GATC 2 cut(s) 453, 896
BssT1I CCWWGG 2 cut(s) 776, 825
Bst2UI CCWGG 2 cut(s) 165, 894
Bst4CI ACNGT 4 cut(s) 269, 619, 727, 1037
Bst6I CTCTTC 5 cut(s) 14, 154, 459, 699, 1196
BstAPI GCANNNNNTGC 1 cut(s) 475
BstC8I GCNNGC 4 cut(s) 256, 1091, 1106, 1231
BstDEI CTNAG 4 cut(s) 123, 354, 904, 1012
BstENI CCTNNNNNAGG 1 cut(s) 1098
BstF5I GGATG 4 cut(s) 502, 885, 1006, 1046
BstKTI GATC 2 cut(s) 456, 899
BstMAI GTCTC 3 cut(s) 228, 645, 907
BstMBI GATC 2 cut(s) 453, 896
BstMWI GCNNNNNNNGC 5 cut(s) 475, 766, 1029, 1299, 1324
BstNI CCWGG 2 cut(s) 165, 894
BstNSI RCATGY 1 cut(s) 312
BstSCI CCNGG 2 cut(s) 163, 892
BstSFI CTRYAG 1 cut(s) 568
BstSLI GKGCMC 1 cut(s) 985
BstV1I GCAGC 4 cut(s) 401, 639, 717, 734
BstV2I GAAGAC 1 cut(s) 1340
BstX2I RGATCY 1 cut(s) 896
BstYI RGATCY 1 cut(s) 896
Bsu36I CCTNAGG 1 cut(s) 123
BsuI GTATCC 2 cut(s) 690, 959
BsuRI GGCC 3 cut(s) 84, 690, 1093
BtrI CACGTC 1 cut(s) 475
BtsCI GGATG 4 cut(s) 502, 885, 1006, 1046
BtsIMutI CAGTG 2 cut(s) 1020, 1033
Cac8I GCNNGC 4 cut(s) 256, 1091, 1106, 1231
CaiI CAGNNNCTG 2 cut(s) 194, 599
Cfr13I GGNCC 2 cut(s) 212, 689
Csp6I GTAC 3 cut(s) 387, 448, 998
CviAII CATG 8 cut(s) 309, 331, 460, 470, 808, 817, 1234, 1299
CviQI GTAC 3 cut(s) 387, 448, 998
DdeI CTNAG 4 cut(s) 123, 354, 904, 1012
DpnI GATC 2 cut(s) 455, 898
DpnII GATC 2 cut(s) 453, 896
DraI TTTAAA 1 cut(s) 1257
EaeI YGGCCR 1 cut(s) 82
Eam1104I CTCTTC 5 cut(s) 14, 154, 459, 699, 1196
EarI CTCTTC 5 cut(s) 14, 154, 459, 699, 1196
Ecl136II GAGCTC 2 cut(s) 565, 636
Eco130I CCWWGG 2 cut(s) 776, 825
Eco147I AGGCCT 1 cut(s) 1093
Eco24I GRGCYC 2 cut(s) 567, 638
Eco31I GGTCTC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 212
Eco53kI GAGCTC 2 cut(s) 565, 636
Eco57I CTGAAG 1 cut(s) 367
Eco81I CCTNAGG 1 cut(s) 123
Eco88I CYCGRG 2 cut(s) 200, 1055
EcoICRI GAGCTC 2 cut(s) 565, 636
EcoNI CCTNNNNNAGG 1 cut(s) 1098
EcoO109I RGGNCCY 1 cut(s) 689
EcoRI GAATTC 1 cut(s) 131
EcoRII CCWGG 2 cut(s) 163, 892
EcoT14I CCWWGG 2 cut(s) 776, 825
EcoT22I ATGCAT 2 cut(s) 504, 1309
EcoT38I GRGCYC 2 cut(s) 567, 638
ErhI CCWWGG 2 cut(s) 776, 825
Esp3I CGTCTC 1 cut(s) 645
FaeI CATG 8 cut(s) 312, 334, 463, 473, 811, 820, 1237, 1302
FalI AAGNNNNNCTT 2 cut(s) 434, 466
FatI CATG 8 cut(s) 308, 330, 459, 469, 807, 816, 1233, 1298
Fnu4HI GCNGC 4 cut(s) 415, 653, 731, 748
FokI GGATG 4 cut(s) 489, 872, 993, 1053
FriOI GRGCYC 2 cut(s) 567, 638
Fsp4HI GCNGC 4 cut(s) 415, 653, 731, 748
FspBI CTAG 5 cut(s) 53, 548, 629, 1001, 1130
GluI GCNGC 4 cut(s) 415, 653, 731, 748
HaeIII GGCC 3 cut(s) 84, 690, 1093
HapII CCGG 1 cut(s) 674
Hin1II CATG 8 cut(s) 312, 334, 463, 473, 811, 820, 1237, 1302
HincII GTYRAC 1 cut(s) 583
HindII GTYRAC 1 cut(s) 583
HindIII AAGCTT 2 cut(s) 256, 365
HinfI GANTC 5 cut(s) 105, 191, 707, 923, 1153
HpaII CCGG 1 cut(s) 674
HphI GGTGA 2 cut(s) 172, 1178
Hpy166II GTNNAC 3 cut(s) 145, 583, 1169
Hpy188I TCNGA 4 cut(s) 69, 196, 890, 913
Hpy188III TCNNGA 5 cut(s) 97, 629, 1057, 1130, 1189
Hpy8I GTNNAC 3 cut(s) 145, 583, 1169
Hpy99I CGWCG 2 cut(s) 326, 1190
HpyAV CCTTC 4 cut(s) 18, 94, 1064, 1217
HpyCH4III ACNGT 4 cut(s) 269, 619, 727, 1037
HpyCH4IV ACGT 1 cut(s) 474
HpyF10VI GCNNNNNNNGC 5 cut(s) 475, 766, 1029, 1299, 1324
HpyF3I CTNAG 4 cut(s) 123, 354, 904, 1012
HpySE526I ACGT 1 cut(s) 474
Hsp92II CATG 8 cut(s) 312, 334, 463, 473, 811, 820, 1237, 1302
Kzo9I GATC 2 cut(s) 453, 896
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 7 cut(s) 344, 562, 744, 914, 1029, 1181, 1298
Lsp1109I GCAGC 4 cut(s) 401, 639, 717, 734
LweI GCATC 2 cut(s) 63, 511
MaeI CTAG 5 cut(s) 53, 548, 629, 1001, 1130
MaeII ACGT 1 cut(s) 474
MaeIII GTNAC 1 cut(s) 619
MalI GATC 2 cut(s) 455, 898
MboI GATC 2 cut(s) 453, 896
MboII GAAGA 6 cut(s) 31, 141, 373, 476, 686, 1213
MflI RGATCY 1 cut(s) 896
MhlI GDGCHC 3 cut(s) 567, 638, 985
MluCI AATT 6 cut(s) 111, 131, 173, 243, 373, 669
MlyI GAGTC 1 cut(s) 932
MmeI TCCRAC 1 cut(s) 913
Mph1103I ATGCAT 2 cut(s) 504, 1309
MroXI GAANNNNTTC 2 cut(s) 104, 1074
MseI TTAA 5 cut(s) 425, 435, 509, 1115, 1256
MslI CAYNNNNRTG 1 cut(s) 68
MspI CCGG 1 cut(s) 674
MspR9I CCNGG 2 cut(s) 165, 894
MvaI CCWGG 2 cut(s) 165, 894
MwoI GCNNNNNNNGC 5 cut(s) 475, 766, 1029, 1299, 1324
NdeII GATC 2 cut(s) 453, 896
NlaIII CATG 8 cut(s) 312, 334, 463, 473, 811, 820, 1237, 1302
NlaIV GGNNCC 7 cut(s) 39, 346, 910, 984, 1031, 1183, 1294
NmeAIII GCCGAG 1 cut(s) 60
NmuCI GTSAC 1 cut(s) 619
NsiI ATGCAT 2 cut(s) 504, 1309
NspI RCATGY 1 cut(s) 312
PaeR7I CTCGAG 2 cut(s) 200, 1055
PceI AGGCCT 1 cut(s) 1093
PciSI GCTCTTC 1 cut(s) 459
PdmI GAANNNNTTC 2 cut(s) 104, 1074
PfeI GAWTC 4 cut(s) 105, 191, 707, 1153
PkrI GCNGC 4 cut(s) 416, 654, 732, 749
PleI GAGTC 1 cut(s) 931
PpsI GAGTC 1 cut(s) 931
Psp124BI GAGCTC 2 cut(s) 567, 638
Psp6I CCWGG 2 cut(s) 163, 892
PspGI CCWGG 2 cut(s) 163, 892
PspN4I GGNNCC 7 cut(s) 39, 346, 910, 984, 1031, 1183, 1294
PspPI GGNCC 2 cut(s) 212, 689
PspXI VCTCGAGB 1 cut(s) 200
PstNI CAGNNNCTG 2 cut(s) 194, 599
PsuI RGATCY 1 cut(s) 896
RsaI GTAC 3 cut(s) 388, 449, 999
RsaNI GTAC 3 cut(s) 387, 448, 998
RseI CAYNNNNRTG 1 cut(s) 68
SacI GAGCTC 2 cut(s) 567, 638
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 5 cut(s) 425, 435, 509, 1115, 1256
SatI GCNGC 4 cut(s) 415, 653, 731, 748
Sau3AI GATC 2 cut(s) 453, 896
Sau96I GGNCC 2 cut(s) 212, 689
ScaI AGTACT 3 cut(s) 388, 449, 999
SchI GAGTC 1 cut(s) 932
ScrFI CCNGG 2 cut(s) 165, 894
SduI GDGCHC 3 cut(s) 567, 638, 985
SfaNI GCATC 2 cut(s) 63, 511
SfcI CTRYAG 1 cut(s) 568
Sfr274I CTCGAG 2 cut(s) 200, 1055
SinI GGWCC 1 cut(s) 212
SlaI CTCGAG 2 cut(s) 200, 1055
SmiMI CAYNNNNRTG 1 cut(s) 68
SmlI CTYRAG 2 cut(s) 200, 1055
SmoI CTYRAG 2 cut(s) 200, 1055
Sse9I AATT 6 cut(s) 111, 131, 173, 243, 373, 669
SseBI AGGCCT 1 cut(s) 1093
SspMI CTAG 5 cut(s) 53, 548, 629, 1001, 1130
SstI GAGCTC 2 cut(s) 567, 638
StuI AGGCCT 1 cut(s) 1093
StyD4I CCNGG 2 cut(s) 163, 892
StyI CCWWGG 2 cut(s) 776, 825
TaaI ACNGT 4 cut(s) 269, 619, 727, 1037
TaiI ACGT 1 cut(s) 477
TaqI TCGA 6 cut(s) 139, 201, 456, 713, 1056, 1188
TasI AATT 6 cut(s) 111, 131, 173, 243, 373, 669
TatI WGTACW 3 cut(s) 386, 447, 997
TfiI GAWTC 4 cut(s) 105, 191, 707, 1153
Tru1I TTAA 5 cut(s) 425, 435, 509, 1115, 1256
Tru9I TTAA 5 cut(s) 425, 435, 509, 1115, 1256
TscAI CASTG 2 cut(s) 1020, 1040
TseFI GTSAC 1 cut(s) 619
TseI GCWGC 4 cut(s) 414, 652, 730, 747
Tsp45I GTSAC 1 cut(s) 619
TspDTI ATGAA 3 cut(s) 319, 367, 699
TspRI CASTG 2 cut(s) 1020, 1040
VpaK11BI GGWCC 1 cut(s) 212
XagI CCTNNNNNAGG 1 cut(s) 1098
XapI RAATTY 2 cut(s) 131, 669
XbaI TCTAGA 2 cut(s) 628, 1129
XceI RCATGY 1 cut(s) 312
XhoI CTCGAG 2 cut(s) 200, 1055
XmnI GAANNNNTTC 2 cut(s) 104, 1074
XspI CTAG 5 cut(s) 53, 548, 629, 1001, 1130
ZrmI AGTACT 3 cut(s) 388, 449, 999
Zsp2I ATGCAT 2 cut(s) 504, 1309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.