AT3G46660

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000714
Physical Location & Seq
Reverse (-)
17189264 .. 17191167
1904 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46660.1

Sequence Viewer

Length: 1377 bp
ATGCAGGTTTTGGGAATGGAGGAAAAGCCTGCAAGGAGAAGCGTAGTGTTGGTTCCATTTCCAGCACAAGGACATATATCTCCAATGATGCAACTTGCCAAAACCCTTCACTTAAAGGGTTTCTCGATCACAGTTGTTCAGACTAAGTTCAATTACTTTAGCCCTTCAGATGACTTCACTCATGATTTTCAGTTCGTCACCATTCCAGAAAGCTTACCAGAGTCTGATTTCAAGAATCTCGGACCAATACAGTTTCTGTTTAAGCTCAACAAAGAGTGTAAGGTGAGCTTCAAGGACTGTTTGGGTCAGTTGGTGCTGCAACAAAGTAATGAGATCTCATGTGTCATCTACGATGAGTTCATGTACTTTGCTGAAGCTGCAGCCAAAGAGTGTAAGCTTCCAAACATCATTTTCAGCACAACAAGTGCCACGGCTTTCGCTTGCCGCTCTGTATTTGACAAACTATATGCAAACAATGTCCAAGCTCCCTTGAAAGAAACTAAAGGACAACAAGAAGAGCTAGTTCCGGAGTTTTATCCCTTGAGATATAAAGACTTTCCAGTTTCACGGTTTGCATCATTAGAGAGCATAATGGAGGTGTATAGGAATACAGTTGACAAACGGACAGCTTCCTCGGTGATAATCAACACTGCGAGCTGTCTAGAGAGCTCATCTCTGTCTTTTCTGCAACAACAACAGCTACAAATTCCAGTGTATCCTATAGGCCCTCTTCACATGGTGGCCTCAGCTCCTACAAGTCTGCTTGAAGAGAACAAGAGCTGCATCGAATGGTTGAACAAACAAAAGGTAAACTCGGTGATATACATAAGCATGGGAAGCATAGCTTTAATGGAAATCAACGAGATAATGGAAGTCGCGTCAGGATTGGCTGCTAGCAACCAACACTTCTTATGGGTGATCCGACCAGGGTCAATACCTGGTTCCGAGTGGATAGAGTCCATGCCTGAAGAGTTTAGTAAGATGGTTTTGGACCGAGGTTACATTGTGAAATGGGCTCCACAGAAGGAAGTACTTTCTCATCCTGCAGTAGGAGGGTTTTGGAGCCATTGTGGATGGAACTCGACACTAGAAAGCATCGGCCAAGGAGTTCCAATGATCTGCAGGCCATTTTCGGGTGATCAAAAGGTGAACGCTAGATACTTGGAGTGTGTATGGAAAATTGGGATTCAAGTGGAGGGTGAGCTAGACAGAGGAGTGGTCGAGAGAGCTGTGAAGAGGTTAATGGTTGACGAAGAAGGAGAGGAGATGAGGAAGAGAGCTTTCAGTTTAAAAGAGCAACTTAGAGCCTCTGTTAAAAGTGGAGGCTCTTCACACAACTCGCTAGAAGAGTTTGTACACTTCATAAGGACTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

458

Amino Acids

51.66

Weight (kDa)

5.94

Isoelectric Point (pI)

53.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 259 - 418 3.3e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 447
AccII CGCG 1 cut(s) 878
AccIII TCCGGA 1 cut(s) 526
AciI CCGC 1 cut(s) 445
AclWI GGATC 1 cut(s) 913
AcoI YGGCCR 1 cut(s) 1099
AcsI RAATTY 1 cut(s) 705
AcuI CTGAAG 3 cut(s) 150, 393, 987
AdeI CACNNNGTG 1 cut(s) 739
AfaI GTAC 3 cut(s) 365, 1032, 1356
AfiI CCNNNNNNNGG 3 cut(s) 68, 1049, 1133
AgsI TTSAA 7 cut(s) 151, 232, 292, 493, 767, 796, 1190
AjnI CCWGG 2 cut(s) 925, 937
Alw21I GWGCWC 1 cut(s) 671
AlwI GGATC 1 cut(s) 913
AlwNI CAGNNNCTG 2 cut(s) 224, 256
Aor13HI TCCGGA 1 cut(s) 526
AoxI GGCC 4 cut(s) 724, 741, 1099, 1124
ApeKI GCWGC 5 cut(s) 316, 377, 380, 780, 890
ApoI RAATTY 1 cut(s) 705
AspS9I GGNCC 3 cut(s) 242, 725, 991
AsuHPI GGTGA 8 cut(s) 190, 295, 649, 829, 928, 1148, 1159, 1211
AsuNHI GCTAGC 1 cut(s) 893
AvaII GGWCC 2 cut(s) 242, 991
BanII GRGCYC 2 cut(s) 671, 1018
BarI GAAGNNNNNNTAC 2 cut(s) 1338, 1370
Bbv12I GWGCWC 1 cut(s) 671
BbvCI CCTCAGC 1 cut(s) 745
BbvI GCAGC 5 cut(s) 303, 364, 392, 767, 877
BccI CCATC 2 cut(s) 976, 1068
BceAI ACGGC 1 cut(s) 447
BciT130I CCWGG 2 cut(s) 927, 939
BciVI GTATCC 1 cut(s) 726
BclI TGATCA 1 cut(s) 1138
BfaI CTAG 7 cut(s) 521, 662, 894, 1088, 1155, 1205, 1343
BfmI CTRYAG 4 cut(s) 378, 720, 1044, 1120
BfuI GTATCC 1 cut(s) 726
BglII AGATCT 1 cut(s) 333
BisI GCNGC 6 cut(s) 317, 378, 381, 445, 781, 891
BlsI GCNGC 6 cut(s) 318, 379, 382, 446, 782, 892
BmcAI AGTACT 1 cut(s) 1032
Bme1390I CCNGG 2 cut(s) 927, 939
Bme18I GGWCC 2 cut(s) 242, 991
BmgT120I GGNCC 3 cut(s) 242, 725, 991
BmiI GGNNCC 4 cut(s) 54, 943, 1017, 1064
BmrFI CCNGG 2 cut(s) 927, 939
BmsI GCATC 4 cut(s) 78, 584, 792, 1104
BmtI GCTAGC 1 cut(s) 897
BoxI GACNNNNGTC 1 cut(s) 928
BplI GAGNNNNNCTC 2 cut(s) 658, 690
Bpu10I CCTNAGC 1 cut(s) 745
BpuEI CTTGAG 1 cut(s) 562
BsaJI CCNNGG 5 cut(s) 429, 633, 926, 994, 1102
BsaWI WCCGGW 1 cut(s) 526
BsaXI ACNNNNNCTCC 2 cut(s) 1054, 1084
Bsc4I CCNNNNNNNGG 3 cut(s) 68, 1049, 1133
Bse1I ACTGG 2 cut(s) 560, 710
BseAI TCCGGA 1 cut(s) 526
BseBI CCWGG 2 cut(s) 927, 939
BseDI CCNNGG 5 cut(s) 429, 633, 926, 994, 1102
BseGI GGATG 2 cut(s) 1039, 1079
BseLI CCNNNNNNNGG 3 cut(s) 68, 1049, 1133
BseMII CTCAG 1 cut(s) 759
BseNI ACTGG 2 cut(s) 560, 710
BseRI GAGGAG 2 cut(s) 1227, 1277
BseXI GCAGC 5 cut(s) 303, 364, 392, 767, 877
Bsh1236I CGCG 1 cut(s) 878
BshFI GGCC 4 cut(s) 726, 743, 1101, 1126
BsiHKAI GWGCWC 1 cut(s) 671
BsiSI CCGG 1 cut(s) 527
BslI CCNNNNNNNGG 3 cut(s) 68, 1049, 1133
BsnI GGCC 4 cut(s) 726, 743, 1101, 1126
Bsp1286I GDGCHC 2 cut(s) 671, 1018
Bsp13I TCCGGA 1 cut(s) 526
Bsp1407I TGTACA 1 cut(s) 1354
Bsp143I GATC 5 cut(s) 126, 333, 918, 1116, 1138
BspACI CCGC 1 cut(s) 445
BspANI GGCC 4 cut(s) 726, 743, 1101, 1126
BspCNI CTCAG 1 cut(s) 758
BspEI TCCGGA 1 cut(s) 526
BspFNI CGCG 1 cut(s) 878
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 4 cut(s) 54, 943, 1017, 1064
BspMAI CTGCAG 3 cut(s) 382, 1048, 1124
BspOI GCTAGC 1 cut(s) 897
BspPI GGATC 1 cut(s) 913
BspQI GCTCTTC 2 cut(s) 510, 1333
BsrBI CCGCTC 1 cut(s) 447
BsrGI TGTACA 1 cut(s) 1354
BsrI ACTGG 2 cut(s) 560, 710
BssECI CCNNGG 5 cut(s) 429, 633, 926, 994, 1102
BssMI GATC 5 cut(s) 126, 333, 918, 1116, 1138
BssT1I CCWWGG 1 cut(s) 1102
Bst2UI CCWGG 2 cut(s) 927, 939
Bst4CI ACNGT 5 cut(s) 133, 252, 299, 570, 613
Bst6I CTCTTC 8 cut(s) 510, 735, 762, 963, 1229, 1268, 1333, 1341
BstAUI TGTACA 1 cut(s) 1354
BstC8I GCNNGC 5 cut(s) 30, 442, 655, 895, 1124
BstDEI CTNAG 3 cut(s) 144, 745, 1301
BstDSI CCRYGG 1 cut(s) 429
BstENI CCTNNNNNAGG 1 cut(s) 1047
BstF5I GGATG 2 cut(s) 1039, 1079
BstFNI CGCG 1 cut(s) 878
BstKTI GATC 5 cut(s) 129, 336, 921, 1119, 1141
BstMBI GATC 5 cut(s) 126, 333, 918, 1116, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 377, 837
BstNI CCWGG 2 cut(s) 927, 939
BstPAI GACNNNNGTC 1 cut(s) 928
BstSCI CCNGG 2 cut(s) 925, 937
BstSFI CTRYAG 4 cut(s) 378, 720, 1044, 1120
BstUI CGCG 1 cut(s) 878
BstV1I GCAGC 5 cut(s) 303, 364, 392, 767, 877
BstX2I RGATCY 1 cut(s) 333
BstYI RGATCY 1 cut(s) 333
BsuI GTATCC 1 cut(s) 726
BsuRI GGCC 4 cut(s) 726, 743, 1101, 1126
BtgI CCRYGG 1 cut(s) 429
BtsCI GGATG 2 cut(s) 1039, 1079
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 2 cut(s) 648, 717
Cac8I GCNNGC 5 cut(s) 30, 442, 655, 895, 1124
CaiI CAGNNNCTG 2 cut(s) 224, 256
CciI TCATGA 1 cut(s) 181
Cfr13I GGNCC 3 cut(s) 242, 725, 991
CseI GACGC 1 cut(s) 867
CsiI ACCWGGT 1 cut(s) 937
Csp6I GTAC 3 cut(s) 364, 1031, 1355
CviAII CATG 6 cut(s) 182, 339, 361, 736, 832, 961
CviQI GTAC 3 cut(s) 364, 1031, 1355
DdeI CTNAG 3 cut(s) 144, 745, 1301
DpnI GATC 5 cut(s) 128, 335, 920, 1118, 1140
DpnII GATC 5 cut(s) 126, 333, 918, 1116, 1138
DraI TTTAAA 1 cut(s) 1290
DraIII CACNNNGTG 1 cut(s) 739
EaeI YGGCCR 1 cut(s) 1099
Eam1104I CTCTTC 8 cut(s) 510, 735, 762, 963, 1229, 1268, 1333, 1341
EarI CTCTTC 8 cut(s) 510, 735, 762, 963, 1229, 1268, 1333, 1341
Ecl136II GAGCTC 1 cut(s) 669
Eco130I CCWWGG 1 cut(s) 1102
Eco24I GRGCYC 2 cut(s) 671, 1018
Eco47I GGWCC 2 cut(s) 242, 991
Eco53kI GAGCTC 1 cut(s) 669
Eco57I CTGAAG 3 cut(s) 150, 393, 987
EcoICRI GAGCTC 1 cut(s) 669
EcoNI CCTNNNNNAGG 1 cut(s) 1047
EcoO109I RGGNCCY 1 cut(s) 725
EcoRII CCWGG 2 cut(s) 925, 937
EcoT14I CCWWGG 1 cut(s) 1102
EcoT38I GRGCYC 2 cut(s) 671, 1018
ErhI CCWWGG 1 cut(s) 1102
FaeI CATG 6 cut(s) 185, 342, 364, 739, 835, 964
FalI AAGNNNNNCTT 6 cut(s) 272, 304, 829, 861, 1284, 1316
FatI CATG 6 cut(s) 181, 338, 360, 735, 831, 960
FbaI TGATCA 1 cut(s) 1138
Fnu4HI GCNGC 6 cut(s) 317, 378, 381, 445, 781, 891
FokI GGATG 2 cut(s) 1026, 1086
FriOI GRGCYC 2 cut(s) 671, 1018
Fsp4HI GCNGC 6 cut(s) 317, 378, 381, 445, 781, 891
FspBI CTAG 7 cut(s) 521, 662, 894, 1088, 1155, 1205, 1343
GluI GCNGC 6 cut(s) 317, 378, 381, 445, 781, 891
HaeIII GGCC 4 cut(s) 726, 743, 1101, 1126
HapII CCGG 1 cut(s) 527
HgaI GACGC 1 cut(s) 867
Hin1II CATG 6 cut(s) 185, 342, 364, 739, 835, 964
HincII GTYRAC 2 cut(s) 616, 1249
HindII GTYRAC 2 cut(s) 616, 1249
HindIII AAGCTT 2 cut(s) 211, 395
HinfI GANTC 5 cut(s) 221, 235, 956, 1186, 1369
HpaII CCGG 1 cut(s) 527
HphI GGTGA 8 cut(s) 190, 295, 649, 829, 928, 1148, 1159, 1211
Hpy166II GTNNAC 5 cut(s) 616, 811, 1150, 1249, 1357
Hpy188I TCNGA 6 cut(s) 141, 169, 226, 242, 923, 946
Hpy188III TCNNGA 8 cut(s) 124, 182, 206, 232, 527, 662, 882, 1222
Hpy8I GTNNAC 5 cut(s) 616, 811, 1150, 1249, 1357
HpyAV CCTTC 4 cut(s) 116, 174, 1018, 1250
HpyCH4III ACNGT 5 cut(s) 133, 252, 299, 570, 613
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 837
HpyF3I CTNAG 3 cut(s) 144, 745, 1301
Hsp92II CATG 6 cut(s) 185, 342, 364, 739, 835, 964
Kpn2I TCCGGA 1 cut(s) 526
Ksp22I TGATCA 1 cut(s) 1138
Kzo9I GATC 5 cut(s) 126, 333, 918, 1116, 1138
LguI GCTCTTC 2 cut(s) 510, 1333
LmnI GCTCC 4 cut(s) 490, 754, 1021, 1062
Lsp1109I GCAGC 5 cut(s) 303, 364, 392, 767, 877
LweI GCATC 4 cut(s) 78, 584, 792, 1104
MabI ACCWGGT 1 cut(s) 937
MaeI CTAG 7 cut(s) 521, 662, 894, 1088, 1155, 1205, 1343
MaeIII GTNAC 2 cut(s) 196, 998
MalI GATC 5 cut(s) 128, 335, 920, 1118, 1140
MbiI CCGCTC 1 cut(s) 447
MboI GATC 5 cut(s) 126, 333, 918, 1116, 1138
MboII GAAGA 9 cut(s) 527, 722, 779, 980, 1246, 1265, 1285, 1320, 1358
MflI RGATCY 1 cut(s) 333
MhlI GDGCHC 2 cut(s) 671, 1018
MluCI AATT 3 cut(s) 151, 705, 1179
MlyI GAGTC 3 cut(s) 230, 965, 1363
MmeI TCCRAC 1 cut(s) 946
MroI TCCGGA 1 cut(s) 526
MseI TTAA 6 cut(s) 113, 261, 848, 1241, 1289, 1314
MslI CAYNNNNRTG 1 cut(s) 830
MspI CCGG 1 cut(s) 527
MspR9I CCNGG 2 cut(s) 927, 939
MvaI CCWGG 2 cut(s) 927, 939
MvnI CGCG 1 cut(s) 878
MwoI GCNNNNNNNGC 2 cut(s) 377, 837
NdeII GATC 5 cut(s) 126, 333, 918, 1116, 1138
NheI GCTAGC 1 cut(s) 893
NlaIII CATG 6 cut(s) 185, 342, 364, 739, 835, 964
NlaIV GGNNCC 4 cut(s) 54, 943, 1017, 1064
NmuCI GTSAC 1 cut(s) 196
PagI TCATGA 1 cut(s) 181
PciSI GCTCTTC 2 cut(s) 510, 1333
PfeI GAWTC 2 cut(s) 235, 1186
PkrI GCNGC 6 cut(s) 318, 379, 382, 446, 782, 892
PleI GAGTC 3 cut(s) 229, 964, 1363
PpsI GAGTC 3 cut(s) 229, 964, 1363
PshAI GACNNNNGTC 1 cut(s) 928
Psp124BI GAGCTC 1 cut(s) 671
Psp6I CCWGG 2 cut(s) 925, 937
PspGI CCWGG 2 cut(s) 925, 937
PspN4I GGNNCC 4 cut(s) 54, 943, 1017, 1064
PspPI GGNCC 3 cut(s) 242, 725, 991
PsrI GAACNNNNNNTAC 4 cut(s) 36, 68, 1142, 1174
PstI CTGCAG 3 cut(s) 382, 1048, 1124
PstNI CAGNNNCTG 2 cut(s) 224, 256
PsuI RGATCY 1 cut(s) 333
RsaI GTAC 3 cut(s) 365, 1032, 1356
RsaNI GTAC 3 cut(s) 364, 1031, 1355
RseI CAYNNNNRTG 1 cut(s) 830
SacI GAGCTC 1 cut(s) 671
SapI GCTCTTC 2 cut(s) 510, 1333
SaqAI TTAA 6 cut(s) 113, 261, 848, 1241, 1289, 1314
SatI GCNGC 6 cut(s) 317, 378, 381, 445, 781, 891
Sau3AI GATC 5 cut(s) 126, 333, 918, 1116, 1138
Sau96I GGNCC 3 cut(s) 242, 725, 991
ScaI AGTACT 1 cut(s) 1032
SchI GAGTC 3 cut(s) 230, 965, 1363
ScrFI CCNGG 2 cut(s) 927, 939
SduI GDGCHC 2 cut(s) 671, 1018
SexAI ACCWGGT 1 cut(s) 937
SfaNI GCATC 4 cut(s) 78, 584, 792, 1104
SfcI CTRYAG 4 cut(s) 378, 720, 1044, 1120
SinI GGWCC 2 cut(s) 242, 991
SmiMI CAYNNNNRTG 1 cut(s) 830
SmlI CTYRAG 1 cut(s) 541
SmoI CTYRAG 1 cut(s) 541
Sse9I AATT 3 cut(s) 151, 705, 1179
SsiI CCGC 1 cut(s) 445
SspMI CTAG 7 cut(s) 521, 662, 894, 1088, 1155, 1205, 1343
SstI GAGCTC 1 cut(s) 671
StyD4I CCNGG 2 cut(s) 925, 937
StyI CCWWGG 1 cut(s) 1102
TaaI ACNGT 5 cut(s) 133, 252, 299, 570, 613
TaqI TCGA 4 cut(s) 125, 786, 1082, 1221
TaqII GACCGA 1 cut(s) 1008
TasI AATT 3 cut(s) 151, 705, 1179
TatI WGTACW 3 cut(s) 363, 1030, 1354
TauI GCSGC 1 cut(s) 447
TfiI GAWTC 2 cut(s) 235, 1186
Tru1I TTAA 6 cut(s) 113, 261, 848, 1241, 1289, 1314
Tru9I TTAA 6 cut(s) 113, 261, 848, 1241, 1289, 1314
TscAI CASTG 2 cut(s) 655, 717
TseFI GTSAC 1 cut(s) 196
TseI GCWGC 5 cut(s) 316, 377, 380, 780, 890
Tsp45I GTSAC 1 cut(s) 196
TspDTI ATGAA 2 cut(s) 349, 1351
TspGWI ACGGA 1 cut(s) 637
TspRI CASTG 2 cut(s) 655, 717
VpaK11BI GGWCC 2 cut(s) 242, 991
XagI CCTNNNNNAGG 1 cut(s) 1047
XapI RAATTY 1 cut(s) 705
XbaI TCTAGA 1 cut(s) 661
XspI CTAG 7 cut(s) 521, 662, 894, 1088, 1155, 1205, 1343
ZrmI AGTACT 1 cut(s) 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.