AT3G46670

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000714
Physical Location & Seq
Reverse (-)
17192589 .. 17194397
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46670.1

Sequence Viewer

Length: 1356 bp
ATGGAGGAAAAGCCGGCGGGCAGAAGAGTAGTGTTGGTTGCAGTTCCAGCTCAAGGACATATCTCTCCAATAATGCAACTTGCAAAAACACTTCACTTGAAGGGTTTCTCAATCACAATCGCTCAGACAAAGTTCAATTACTTTAGCCCTTCAGATGACTTCACTGATTTTCAGTTTGTCACCATTCCAGAAAGCTTACCAGAGTCTGATTTTGAGGATCTCGGGCCAATAGAGTTTCTGCATAAGCTCAACAAAGAGTGTCAGGTGAGCTTCAAAGACTGTTTGGGTCAGTTGTTGCTGCAACAAGGTAATGAGATAGCCTGTGTTGTCTACGACGAGTTCATGTACTTTGCTGAAGCTGCAGCCAAAGAGTTTAAGCTTCCAAACGTCATTTTCAGCACCACAAGTGCCACGGCTTTTGTTTGCCGCTCTGCATTCGACAAACTTTATGCAAACAGTATCCTGACTCCCTTGAAAGAACCCAAAGGACAACAAAACGAGCTAGTGCCAGAGTTTCATCCCCTGAGATGCAAAGACTTTCCGGTTTCACATTGGGCATCATTAGAAAGCATGATGGAGCTGTATAGGAATACAGTTGACAAACGGACAGCTTCCTCGGTGATAATCAACACAGCGAGCTGTCTAGAGAGCTCATCTCTGTCTCGTCTGCAGCAACAGCTACAAATTCCAGTTTATCCTATAGGCCCTCTTCACCTGGTGGCATCAGCTTCTACGAGTCTTCTTGAAGAGAACAAGAGCTGTATTGAATGGTTGAACAAACAAAAGAAAAACTCTGTGATATTCGTAAGCTTGGGAAGCTTAGCTTTGATGGAAATCAATGAGGTGATAGAAACTGCTTTGGGATTGGATAGTAGCAAGCAACAGTTCTTGTGGGTCATTCGGCCAGGGTCAGTACGTGGTTCGGAATGGATAGAGAACTTGCCTAAGGAGTTTAGTAAGATAATTTCGGGTCGAGGTTACATTGTGAAATGGGCTCCACAGAAGGAAGTACTTTCTCATCCTGCAGTAGGAGGATTTTGGAGCCATTGCGGATGGAACTCGACACTAGAGAGCATCGGGGAAGGAGTTCCAATGATTTGCAAGCCGTTTTCCAGTGATCAAATGGTGAATGCGAGATACTTGGAGTGTGTATGGAAAATTGGGATTCAAGTTGAGGGTGATCTAGACAGAGGAGCGGTCGAGAGAGCTGTGAGGAGGTTAATGGTGGAGGAAGAAGGGGAGGGGATGAGGAAGAGAGCTATCAGTTTGAAAGAGCAACTTAGAGCCTCTGTTATAAGTGGAGGTTCTTCACACAACTCGCTAGAGGAGTTTGTACACTACATGAGGACTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

451

Amino Acids

50.56

Weight (kDa)

5.89

Isoelectric Point (pI)

50.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 220 - 410 7.6e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1295
AccBSI CCGCTC 2 cut(s) 429, 1196
AccI GTMKAC 1 cut(s) 330
AciI CCGC 4 cut(s) 17, 427, 1050, 1196
AclWI GGATC 1 cut(s) 225
AcoI YGGCCR 1 cut(s) 902
AcsI RAATTY 1 cut(s) 684
AcuI CTGAAG 2 cut(s) 135, 375
AdeI CACNNNGTG 1 cut(s) 718
AfaI GTAC 4 cut(s) 347, 915, 1011, 1335
AfiI CCNNNNNNNGG 2 cut(s) 53, 1028
AgsI TTSAA 9 cut(s) 100, 136, 274, 475, 746, 767, 775, 1169, 1270
AjnI CCWGG 2 cut(s) 714, 904
Alw21I GWGCWC 1 cut(s) 653
Alw26I GTCTC 1 cut(s) 666
AlwI GGATC 1 cut(s) 225
AlwNI CAGNNNCTG 1 cut(s) 206
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 3 cut(s) 224, 703, 902
ApeKI GCWGC 4 cut(s) 298, 359, 362, 670
ApoI RAATTY 1 cut(s) 684
Asp700I GAANNNNTTC 2 cut(s) 104, 1086
AspS9I GGNCC 2 cut(s) 224, 704
AsuHPI GGTGA 7 cut(s) 172, 277, 631, 704, 856, 1138, 1190
AvaI CYCGRG 1 cut(s) 221
AxyI CCTNAGG 1 cut(s) 945
BanII GRGCYC 2 cut(s) 653, 997
BbsI GAAGAC 1 cut(s) 731
Bbv12I GWGCWC 1 cut(s) 653
BbvI GCAGC 4 cut(s) 285, 346, 374, 682
BccI CCATC 3 cut(s) 568, 823, 1047
BceAI ACGGC 2 cut(s) 429, 1090
BciT130I CCWGG 2 cut(s) 716, 906
BciVI GTATCC 1 cut(s) 470
BclI TGATCA 1 cut(s) 1117
BcoDI GTCTC 1 cut(s) 666
BfaI CTAG 5 cut(s) 503, 644, 1067, 1184, 1322
BfmI CTRYAG 4 cut(s) 360, 668, 699, 1023
BfuI GTATCC 1 cut(s) 470
BisI GCNGC 5 cut(s) 299, 360, 363, 427, 671
BlpI GCTNAGC 1 cut(s) 820
BlsI GCNGC 5 cut(s) 300, 361, 364, 428, 672
BmcAI AGTACT 1 cut(s) 1011
Bme1390I CCNGG 2 cut(s) 716, 906
BmeT110I CYCGRG 1 cut(s) 221
BmgT120I GGNCC 2 cut(s) 224, 704
BmiI GGNNCC 2 cut(s) 996, 1043
BmrFI CCNGG 2 cut(s) 716, 906
BmsI GCATC 4 cut(s) 518, 566, 731, 1083
BpiI GAAGAC 1 cut(s) 731
BplI GAGNNNNNCTC 2 cut(s) 640, 672
Bpu1102I GCTNAGC 1 cut(s) 820
BpuEI CTTGAG 1 cut(s) 36
BsaAI YACGTR 1 cut(s) 917
BsaBI GATNNNNATC 1 cut(s) 833
BsaJI CCNNGG 3 cut(s) 411, 615, 905
BsaWI WCCGGW 1 cut(s) 541
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 1028
Bse118I RCCGGY 1 cut(s) 13
Bse1I ACTGG 2 cut(s) 689, 1113
Bse21I CCTNAGG 1 cut(s) 945
Bse3DI GCAATG 1 cut(s) 1045
Bse8I GATNNNNATC 1 cut(s) 833
BseBI CCWGG 2 cut(s) 716, 906
BseDI CCNNGG 3 cut(s) 411, 615, 905
BseGI GGATG 4 cut(s) 517, 1018, 1058, 1251
BseJI GATNNNNATC 1 cut(s) 833
BseLI CCNNNNNNNGG 2 cut(s) 53, 1028
BseMI GCAATG 1 cut(s) 1045
BseMII CTCAG 2 cut(s) 137, 515
BseNI ACTGG 2 cut(s) 689, 1113
BseRI GAGGAG 3 cut(s) 1206, 1228, 1340
BseXI GCAGC 4 cut(s) 285, 346, 374, 682
Bsh1285I CGRYCG 1 cut(s) 1200
BshFI GGCC 3 cut(s) 226, 705, 904
BsiEI CGRYCG 1 cut(s) 1200
BsiHKAI GWGCWC 1 cut(s) 653
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 2 cut(s) 14, 542
BslI CCNNNNNNNGG 2 cut(s) 53, 1028
BsmAI GTCTC 1 cut(s) 666
BsmI GAATGC 2 cut(s) 434, 1135
BsnI GGCC 3 cut(s) 226, 705, 904
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 2 cut(s) 653, 997
Bsp1407I TGTACA 1 cut(s) 1333
Bsp143I GATC 3 cut(s) 217, 1117, 1180
Bsp1720I GCTNAGC 1 cut(s) 820
BspACI CCGC 4 cut(s) 17, 427, 1050, 1196
BspANI GGCC 3 cut(s) 226, 705, 904
BspCNI CTCAG 2 cut(s) 136, 516
BspLI GGNNCC 2 cut(s) 996, 1043
BspMAI CTGCAG 3 cut(s) 364, 672, 1027
BspPI GGATC 1 cut(s) 225
BsrBI CCGCTC 2 cut(s) 429, 1196
BsrDI GCAATG 1 cut(s) 1045
BsrFI RCCGGY 1 cut(s) 13
BsrGI TGTACA 1 cut(s) 1333
BsrI ACTGG 2 cut(s) 689, 1113
BssAI RCCGGY 1 cut(s) 13
BssECI CCNNGG 3 cut(s) 411, 615, 905
BssMI GATC 3 cut(s) 217, 1117, 1180
Bst2UI CCWGG 2 cut(s) 716, 906
Bst4CI ACNGT 4 cut(s) 281, 458, 595, 885
Bst6I CTCTTC 4 cut(s) 19, 714, 741, 1247
BstAUI TGTACA 1 cut(s) 1333
BstBAI YACGTR 1 cut(s) 917
BstC8I GCNNGC 5 cut(s) 15, 19, 637, 878, 1103
BstDEI CTNAG 5 cut(s) 123, 524, 820, 945, 1280
BstDSI CCRYGG 1 cut(s) 411
BstENI CCTNNNNNAGG 1 cut(s) 1026
BstF5I GGATG 4 cut(s) 517, 1018, 1058, 1251
BstKTI GATC 3 cut(s) 220, 1120, 1183
BstMAI GTCTC 1 cut(s) 666
BstMBI GATC 3 cut(s) 217, 1117, 1180
BstMCI CGRYCG 1 cut(s) 1200
BstMWI GCNNNNNNNGC 4 cut(s) 47, 359, 676, 816
BstNI CCWGG 2 cut(s) 716, 906
BstSCI CCNGG 2 cut(s) 714, 904
BstSFI CTRYAG 4 cut(s) 360, 668, 699, 1023
BstV1I GCAGC 4 cut(s) 285, 346, 374, 682
BstV2I GAAGAC 1 cut(s) 731
BstX2I RGATCY 1 cut(s) 217
BstYI RGATCY 1 cut(s) 217
Bsu36I CCTNAGG 1 cut(s) 945
BsuI GTATCC 1 cut(s) 470
BsuRI GGCC 3 cut(s) 226, 705, 904
BtgI CCRYGG 1 cut(s) 411
BtsCI GGATG 4 cut(s) 517, 1018, 1058, 1251
BtsIMutI CAGTG 2 cut(s) 162, 1120
Cac8I GCNNGC 5 cut(s) 15, 19, 637, 878, 1103
CaiI CAGNNNCTG 1 cut(s) 206
Cfr10I RCCGGY 1 cut(s) 13
Cfr13I GGNCC 2 cut(s) 224, 704
CsiI ACCWGGT 1 cut(s) 714
Csp6I GTAC 4 cut(s) 346, 914, 1010, 1334
CspCI CAANNNNNGTGG 2 cut(s) 400, 435
CviAII CATG 3 cut(s) 343, 571, 1342
CviQI GTAC 4 cut(s) 346, 914, 1010, 1334
DdeI CTNAG 5 cut(s) 123, 524, 820, 945, 1280
DpnI GATC 3 cut(s) 219, 1119, 1182
DpnII GATC 3 cut(s) 217, 1117, 1180
DraIII CACNNNGTG 1 cut(s) 718
EaeI YGGCCR 1 cut(s) 902
Eam1104I CTCTTC 4 cut(s) 19, 714, 741, 1247
EarI CTCTTC 4 cut(s) 19, 714, 741, 1247
Ecl136II GAGCTC 1 cut(s) 651
Eco24I GRGCYC 2 cut(s) 653, 997
Eco53kI GAGCTC 1 cut(s) 651
Eco57I CTGAAG 2 cut(s) 135, 375
Eco81I CCTNAGG 1 cut(s) 945
Eco88I CYCGRG 1 cut(s) 221
EcoICRI GAGCTC 1 cut(s) 651
EcoNI CCTNNNNNAGG 1 cut(s) 1026
EcoO109I RGGNCCY 1 cut(s) 704
EcoRII CCWGG 2 cut(s) 714, 904
EcoT38I GRGCYC 2 cut(s) 653, 997
FaeI CATG 3 cut(s) 346, 574, 1345
FalI AAGNNNNNCTT 4 cut(s) 808, 840, 1263, 1295
FatI CATG 3 cut(s) 342, 570, 1341
FauI CCCGC 1 cut(s) 10
FbaI TGATCA 1 cut(s) 1117
FblI GTMKAC 1 cut(s) 330
Fnu4HI GCNGC 5 cut(s) 299, 360, 363, 427, 671
FokI GGATG 4 cut(s) 504, 1005, 1065, 1258
FriOI GRGCYC 2 cut(s) 653, 997
Fsp4HI GCNGC 5 cut(s) 299, 360, 363, 427, 671
FspBI CTAG 5 cut(s) 503, 644, 1067, 1184, 1322
GluI GCNGC 5 cut(s) 299, 360, 363, 427, 671
HaeIII GGCC 3 cut(s) 226, 705, 904
HapII CCGG 2 cut(s) 14, 542
Hin1II CATG 3 cut(s) 346, 574, 1345
HincII GTYRAC 1 cut(s) 598
HindII GTYRAC 1 cut(s) 598
HindIII AAGCTT 4 cut(s) 193, 377, 808, 817
HinfI GANTC 5 cut(s) 203, 466, 736, 1165, 1348
HpaII CCGG 2 cut(s) 14, 542
HphI GGTGA 7 cut(s) 172, 277, 631, 704, 856, 1138, 1190
Hpy166II GTNNAC 3 cut(s) 331, 598, 1336
Hpy188I TCNGA 4 cut(s) 126, 154, 208, 925
Hpy188III TCNNGA 6 cut(s) 188, 463, 644, 743, 1184, 1201
Hpy8I GTNNAC 3 cut(s) 331, 598, 1336
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 5 cut(s) 94, 159, 997, 1076, 1229
HpyCH4III ACNGT 4 cut(s) 281, 458, 595, 885
HpyCH4IV ACGT 2 cut(s) 387, 916
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 359, 676, 816
HpyF3I CTNAG 5 cut(s) 123, 524, 820, 945, 1280
HpySE526I ACGT 2 cut(s) 387, 916
Hsp92II CATG 3 cut(s) 346, 574, 1345
KroI GCCGGC 1 cut(s) 13
KroNI GCCGGC 1 cut(s) 15
Ksp22I TGATCA 1 cut(s) 1117
Kzo9I GATC 3 cut(s) 217, 1117, 1180
LmnI GCTCC 4 cut(s) 577, 1000, 1041, 1193
Lsp1109I GCAGC 4 cut(s) 285, 346, 374, 682
LweI GCATC 4 cut(s) 518, 566, 731, 1083
MabI ACCWGGT 1 cut(s) 714
MaeI CTAG 5 cut(s) 503, 644, 1067, 1184, 1322
MaeII ACGT 2 cut(s) 387, 916
MaeIII GTNAC 2 cut(s) 178, 977
MalI GATC 3 cut(s) 219, 1119, 1182
MbiI CCGCTC 2 cut(s) 429, 1196
MboI GATC 3 cut(s) 217, 1117, 1180
MboII GAAGA 7 cut(s) 36, 701, 731, 758, 1244, 1264, 1299
MflI RGATCY 1 cut(s) 217
MhlI GDGCHC 2 cut(s) 653, 997
MluCI AATT 4 cut(s) 136, 684, 963, 1158
MlyI GAGTC 4 cut(s) 212, 460, 745, 1342
MroNI GCCGGC 1 cut(s) 13
MroXI GAANNNNTTC 2 cut(s) 104, 1086
MseI TTAA 2 cut(s) 375, 1220
MspI CCGG 2 cut(s) 14, 542
MspR9I CCNGG 2 cut(s) 716, 906
Mva1269I GAATGC 2 cut(s) 434, 1135
MvaI CCWGG 2 cut(s) 716, 906
MwoI GCNNNNNNNGC 4 cut(s) 47, 359, 676, 816
NaeI GCCGGC 1 cut(s) 15
NdeII GATC 3 cut(s) 217, 1117, 1180
NgoMIV GCCGGC 1 cut(s) 13
NlaIII CATG 3 cut(s) 346, 574, 1345
NlaIV GGNNCC 2 cut(s) 996, 1043
NmuCI GTSAC 1 cut(s) 178
PctI GAATGC 2 cut(s) 434, 1135
PdiI GCCGGC 1 cut(s) 15
PdmI GAANNNNTTC 2 cut(s) 104, 1086
PfeI GAWTC 1 cut(s) 1165
PkrI GCNGC 5 cut(s) 300, 361, 364, 428, 672
PleI GAGTC 4 cut(s) 211, 460, 744, 1342
PpsI GAGTC 4 cut(s) 211, 460, 744, 1342
Ppu21I YACGTR 1 cut(s) 917
PsiI TTATAA 1 cut(s) 1295
Psp124BI GAGCTC 1 cut(s) 653
Psp6I CCWGG 2 cut(s) 714, 904
PspGI CCWGG 2 cut(s) 714, 904
PspN4I GGNNCC 2 cut(s) 996, 1043
PspPI GGNCC 2 cut(s) 224, 704
PstI CTGCAG 3 cut(s) 364, 672, 1027
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 1 cut(s) 217
RsaI GTAC 4 cut(s) 347, 915, 1011, 1335
RsaNI GTAC 4 cut(s) 346, 914, 1010, 1334
SacI GAGCTC 1 cut(s) 653
SaqAI TTAA 2 cut(s) 375, 1220
SatI GCNGC 5 cut(s) 299, 360, 363, 427, 671
Sau3AI GATC 3 cut(s) 217, 1117, 1180
Sau96I GGNCC 2 cut(s) 224, 704
ScaI AGTACT 1 cut(s) 1011
SchI GAGTC 4 cut(s) 212, 460, 745, 1342
ScrFI CCNGG 2 cut(s) 716, 906
SduI GDGCHC 2 cut(s) 653, 997
SexAI ACCWGGT 1 cut(s) 714
SfaNI GCATC 4 cut(s) 518, 566, 731, 1083
SfcI CTRYAG 4 cut(s) 360, 668, 699, 1023
SmlI CTYRAG 1 cut(s) 51
SmoI CTYRAG 1 cut(s) 51
Sse9I AATT 4 cut(s) 136, 684, 963, 1158
SsiI CCGC 4 cut(s) 17, 427, 1050, 1196
SspMI CTAG 5 cut(s) 503, 644, 1067, 1184, 1322
SstI GAGCTC 1 cut(s) 653
StyD4I CCNGG 2 cut(s) 714, 904
TaaI ACNGT 4 cut(s) 281, 458, 595, 885
TaiI ACGT 2 cut(s) 390, 919
TaqI TCGA 4 cut(s) 438, 973, 1061, 1200
TasI AATT 4 cut(s) 136, 684, 963, 1158
TatI WGTACW 3 cut(s) 345, 1009, 1333
TauI GCSGC 1 cut(s) 429
TfiI GAWTC 1 cut(s) 1165
Tru1I TTAA 2 cut(s) 375, 1220
Tru9I TTAA 2 cut(s) 375, 1220
TscAI CASTG 2 cut(s) 169, 1120
TseFI GTSAC 1 cut(s) 178
TseI GCWGC 4 cut(s) 298, 359, 362, 670
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 2 cut(s) 331, 506
TspGWI ACGGA 1 cut(s) 619
TspRI CASTG 2 cut(s) 169, 1120
XagI CCTNNNNNAGG 1 cut(s) 1026
XapI RAATTY 1 cut(s) 684
XbaI TCTAGA 2 cut(s) 643, 1183
XcmI CCANNNNNNNNNTGG 1 cut(s) 1120
XmiI GTMKAC 1 cut(s) 330
XmnI GAANNNNTTC 2 cut(s) 104, 1086
XspI CTAG 5 cut(s) 503, 644, 1067, 1184, 1322
ZrmI AGTACT 1 cut(s) 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.