FvH4_3g37280

UDP-glycosyltransferase 76E2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
31972735 .. 31974865
2131 bp
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UTR
Exon/CDS
Intron
FvH4_3g37280.t1

Sequence Viewer

Length: 1350 bp
ATGGAGATGCAAGGTCAAAGATTGGTTCTGGTTCCATGTCCATACCAAGGCCACATAAACCCTATGCTTCAGTTAGGTACGTTTCTTCACTCGAAAGGATTTTCCATTACCATCGTTCACACCCAATTCAACTCTCCTAGCCCTTCCAACCACCCGGAGTTCACCTTCATTCCGATTCCTGATGGCCTAACTGTTCCTCTAGTCTCATCTGGGAATATAGTAGCTATTCTGTTGGCCATCAATGCAAATTGCAAATCGAGTTTCGAACAATGTTTGACTACTCAAGTAATGGAACAAGAACCGGAGAAGAAGATCACCTGCATCATCTATGATGAATTCATGTACTTCTCTGCAGCTGCTGCTAATCATCTAAACATCCCAAGCATCATCCTCCGTACTACCAGTGCGGCCAATTTTCTTGCTCGTAGCACTGTCATAGAACTTCATTCGAAAGGCCACATTCCCTTCCCAGAGTCTGTGTCATTGGACCCGGTGCCCCAACTTCATCTTCTCAGATTTAAGGATCTGCCCATCTCAACCTTTGACACATTAGAGAACTTTTTGAGAGTAGTAGTTAACTCGCATGATGTTAGGAGATCTTCAGCCATAGTTTGTAATACCACAGTCTGCCTTGATCAATCATCACTAGCACAGATCCAAGAACATTGCCAAGTACCGATCTTTTGCGTAGGCCCTCTTCACAAACTCAATACAGCGGCCCCTATTAGTAGTTTACTTGAAGAGGACACAAGTTGTATTGAGTGGCTTGACAAGCAGTCTCACAAGTCAGTTATCTACGTCAGTTTGGGGAGTGTAGCATCCATTGGTGAGAAAGAACTAGCAGAAATGACTTGGGGATTAGCTAACAGCAAGCAACCTTTCTTGTGGGTGATCAGACCTGGCTCCATTAACGGTTCAGATTGGATAGAGCTGTTGCCTCAAGAGTTTAGAGAAGCTATTGGAGAAAGAGGTTTCATAGTGAAATGGGCACCCCAAAGGGAAGTTTTGGCTCATGGCGCTGTGGGGGCGTTTTGGACTCATTGTGGCTGGAATTCAACTCTTGAAAGAATATCGGAAGGGGTTCCGATGATTTGCAAACCGTGTTTCGGTGATCAGAAGGTGCATGCAAGGCATGTTAGCGAAGTATGGAGACTAGGTATAGAATTGGGGGATGTGTTTGAGAGGGGAGAGATAGAGAGAGCTGTTAGGAAAGTTTTGGTGGATAACGATGGGGAGGAAATCAGGGTGAGGGCTAAGGATATGAAGGAGAAAATACAAGTTTCTATGAGCAGTGGTGGATCTACCTACAATTTCTTGAATAAGCTTGTTGAACTCATCATCAGATTCTAA

Protein Analysis

450

Amino Acids

50.13

Weight (kDa)

5.98

Isoelectric Point (pI)

44.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 80 - 409 3e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 326
Acc36I ACCTGC 1 cut(s) 326
AccB1I GGYRCC 2 cut(s) 493, 988
AciI CCGC 2 cut(s) 407, 716
AclWI GGATC 3 cut(s) 531, 649, 1306
AcoI YGGCCR 2 cut(s) 234, 408
AcsI RAATTY 2 cut(s) 335, 1051
AcuI CTGAAG 2 cut(s) 53, 585
AfaI GTAC 4 cut(s) 79, 344, 397, 675
AfiI CCNNNNNNNGG 2 cut(s) 47, 1106
AgsI TTSAA 6 cut(s) 130, 740, 1056, 1064, 1318, 1331
AhdI GACNNNNNGTC 1 cut(s) 775
AjnI CCWGG 1 cut(s) 898
AjuI GAANNNNNNNTTGG 2 cut(s) 492, 524
AluBI AGCT 7 cut(s) 224, 356, 863, 931, 956, 1202, 1324
AluI AGCT 7 cut(s) 224, 356, 863, 931, 956, 1202, 1324
Alw26I GTCTC 3 cut(s) 208, 783, 1144
AlwI GGATC 3 cut(s) 531, 649, 1306
AlwNI CAGNNNCTG 2 cut(s) 359, 476
AoxI GGCC 7 cut(s) 49, 184, 234, 408, 454, 691, 717
ApeKI GCWGC 3 cut(s) 353, 356, 359
ApoI RAATTY 2 cut(s) 335, 1051
Asp700I GAANNNNTTC 1 cut(s) 1080
AspLEI GCGC 1 cut(s) 1019
AspS9I GGNCC 3 cut(s) 487, 692, 718
AsuC2I CCSGG 2 cut(s) 155, 491
AsuHPI GGTGA 6 cut(s) 154, 307, 839, 901, 1121, 1258
AsuII TTCGAA 2 cut(s) 264, 449
AvaII GGWCC 1 cut(s) 487
BaeGI GKGCMC 2 cut(s) 498, 991
BalI TGGCCA 1 cut(s) 236
BanI GGYRCC 2 cut(s) 493, 988
BarI GAAGNNNNNNTAC 2 cut(s) 681, 713
BbvI GCAGC 3 cut(s) 343, 346, 365
BccI CCATC 5 cut(s) 119, 176, 245, 539, 1223
BciT130I CCWGG 1 cut(s) 900
BclI TGATCA 3 cut(s) 634, 891, 1111
BcnI CCSGG 2 cut(s) 155, 491
BcoDI GTCTC 3 cut(s) 208, 783, 1144
BfaI CTAG 5 cut(s) 138, 200, 647, 839, 1154
BfmI CTRYAG 1 cut(s) 351
BfoI RGCGCY 1 cut(s) 1020
BfuAI ACCTGC 1 cut(s) 326
BglII AGATCT 1 cut(s) 596
BisI GCNGC 5 cut(s) 354, 357, 360, 408, 717
BlsI GCNGC 5 cut(s) 355, 358, 361, 409, 718
Bme1390I CCNGG 3 cut(s) 155, 491, 900
Bme18I GGWCC 1 cut(s) 487
BmeRI GACNNNNNGTC 1 cut(s) 775
BmgT120I GGNCC 3 cut(s) 487, 692, 718
BmiI GGNNCC 7 cut(s) 33, 489, 495, 720, 904, 990, 1083
BmrFI CCNGG 3 cut(s) 155, 491, 900
BmsI GCATC 3 cut(s) 330, 393, 827
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu14I TTCGAA 2 cut(s) 264, 449
BpuEI CTTGAG 2 cut(s) 267, 924
BpuMI CCSGG 2 cut(s) 155, 491
BsaJI CCNNGG 1 cut(s) 46
BsaWI WCCGGW 1 cut(s) 301
BsaXI ACNNNNNCTCC 2 cut(s) 1141, 1171
Bsc4I CCNNNNNNNGG 2 cut(s) 47, 1106
Bse1I ACTGG 1 cut(s) 402
Bse3DI GCAATG 1 cut(s) 664
BseBI CCWGG 1 cut(s) 900
BseDI CCNNGG 1 cut(s) 46
BseGI GGATG 4 cut(s) 375, 387, 818, 1177
BseLI CCNNNNNNNGG 2 cut(s) 47, 1106
BseMI GCAATG 1 cut(s) 664
BseMII CTCAG 1 cut(s) 526
BseNI ACTGG 1 cut(s) 402
BseSI GKGCMC 2 cut(s) 498, 991
BseXI GCAGC 3 cut(s) 343, 346, 365
BshFI GGCC 7 cut(s) 51, 186, 236, 410, 456, 693, 719
BshNI GGYRCC 2 cut(s) 493, 988
BsiSI CCGG 3 cut(s) 155, 302, 491
BslI CCNNNNNNNGG 2 cut(s) 47, 1106
BsmAI GTCTC 3 cut(s) 208, 783, 1144
BsnI GGCC 7 cut(s) 51, 186, 236, 410, 456, 693, 719
Bsp119I TTCGAA 2 cut(s) 264, 449
Bsp1286I GDGCHC 2 cut(s) 498, 991
Bsp143I GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
BspACI CCGC 2 cut(s) 407, 716
BspANI GGCC 7 cut(s) 51, 186, 236, 410, 456, 693, 719
BspCNI CTCAG 1 cut(s) 525
BspLI GGNNCC 7 cut(s) 33, 489, 495, 720, 904, 990, 1083
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 326
BspPI GGATC 3 cut(s) 531, 649, 1306
BspT104I TTCGAA 2 cut(s) 264, 449
BspT107I GGYRCC 2 cut(s) 493, 988
BsrDI GCAATG 1 cut(s) 664
BsrI ACTGG 1 cut(s) 402
BssECI CCNNGG 1 cut(s) 46
BssMI GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
BssT1I CCWWGG 1 cut(s) 46
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 5 cut(s) 193, 433, 625, 914, 1101
Bst6I CTCTTC 2 cut(s) 702, 735
BstAPI GCANNNNNTGC 1 cut(s) 359
BstBI TTCGAA 2 cut(s) 264, 449
BstC8I GCNNGC 2 cut(s) 872, 1125
BstDEI CTNAG 2 cut(s) 512, 1254
BstF5I GGATG 4 cut(s) 375, 387, 818, 1177
BstH2I RGCGCY 1 cut(s) 1020
BstHHI GCGC 1 cut(s) 1019
BstKTI GATC 9 cut(s) 315, 526, 599, 637, 657, 681, 894, 1114, 1301
BstMAI GTCTC 3 cut(s) 208, 783, 1144
BstMBI GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
BstMWI GCNNNNNNNGC 6 cut(s) 242, 359, 772, 1016, 1025, 1129
BstNI CCWGG 1 cut(s) 900
BstNSI RCATGY 2 cut(s) 1127, 1136
BstSCI CCNGG 3 cut(s) 153, 489, 898
BstSFI CTRYAG 1 cut(s) 351
BstSLI GKGCMC 2 cut(s) 498, 991
BstV1I GCAGC 3 cut(s) 343, 346, 365
BstX2I RGATCY 4 cut(s) 523, 596, 654, 1298
BstYI RGATCY 4 cut(s) 523, 596, 654, 1298
BsuRI GGCC 7 cut(s) 51, 186, 236, 410, 456, 693, 719
BtsCI GGATG 4 cut(s) 375, 387, 818, 1177
BtsI GCAGTG 1 cut(s) 1297
BtsIMutI CAGTG 3 cut(s) 409, 429, 1297
BveI ACCTGC 1 cut(s) 326
Cac8I GCNNGC 2 cut(s) 872, 1125
CaiI CAGNNNCTG 2 cut(s) 359, 476
CfoI GCGC 1 cut(s) 1019
Cfr13I GGNCC 3 cut(s) 487, 692, 718
Csp6I GTAC 4 cut(s) 78, 343, 396, 674
CviAII CATG 6 cut(s) 36, 340, 584, 1013, 1124, 1133
CviQI GTAC 4 cut(s) 78, 343, 396, 674
DdeI CTNAG 2 cut(s) 512, 1254
DpnI GATC 9 cut(s) 314, 525, 598, 636, 656, 680, 893, 1113, 1300
DpnII GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
DriI GACNNNNNGTC 1 cut(s) 775
EaeI YGGCCR 2 cut(s) 234, 408
Eam1104I CTCTTC 2 cut(s) 702, 735
Eam1105I GACNNNNNGTC 1 cut(s) 775
EarI CTCTTC 2 cut(s) 702, 735
Eco130I CCWWGG 1 cut(s) 46
Eco47I GGWCC 1 cut(s) 487
Eco57I CTGAAG 2 cut(s) 53, 585
EcoO109I RGGNCCY 1 cut(s) 692
EcoRI GAATTC 2 cut(s) 335, 1051
EcoRII CCWGG 1 cut(s) 898
EcoT14I CCWWGG 1 cut(s) 46
ErhI CCWWGG 1 cut(s) 46
FaeI CATG 6 cut(s) 39, 343, 587, 1016, 1127, 1136
FatI CATG 6 cut(s) 35, 339, 583, 1012, 1123, 1132
FbaI TGATCA 3 cut(s) 634, 891, 1111
Fnu4HI GCNGC 5 cut(s) 354, 357, 360, 408, 717
FokI GGATG 4 cut(s) 362, 374, 805, 1184
Fsp4HI GCNGC 5 cut(s) 354, 357, 360, 408, 717
FspBI CTAG 5 cut(s) 138, 200, 647, 839, 1154
GlaI GCGC 1 cut(s) 1018
GluI GCNGC 5 cut(s) 354, 357, 360, 408, 717
HaeII RGCGCY 1 cut(s) 1020
HaeIII GGCC 7 cut(s) 51, 186, 236, 410, 456, 693, 719
HapII CCGG 3 cut(s) 155, 302, 491
HhaI GCGC 1 cut(s) 1019
Hin1II CATG 6 cut(s) 39, 343, 587, 1016, 1127, 1136
Hin6I GCGC 1 cut(s) 1017
HinP1I GCGC 1 cut(s) 1017
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HindIII AAGCTT 1 cut(s) 1322
HinfI GANTC 4 cut(s) 175, 473, 1036, 1344
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 3 cut(s) 155, 302, 491
HphI GGTGA 6 cut(s) 154, 307, 839, 901, 1121, 1258
Hpy166II GTNNAC 4 cut(s) 118, 162, 577, 734
Hpy188I TCNGA 8 cut(s) 174, 515, 896, 919, 1075, 1086, 1116, 1343
Hpy188III TCNNGA 4 cut(s) 179, 941, 1061, 1315
Hpy8I GTNNAC 4 cut(s) 118, 162, 577, 734
HpyAV CCTTC 6 cut(s) 153, 175, 475, 1070, 1111, 1258
HpyCH4III ACNGT 5 cut(s) 193, 433, 625, 914, 1101
HpyCH4IV ACGT 2 cut(s) 80, 798
HpyCH4V TGCA 8 cut(s) 10, 245, 252, 321, 353, 1095, 1123, 1127
HpyF10VI GCNNNNNNNGC 6 cut(s) 242, 359, 772, 1016, 1025, 1129
HpyF3I CTNAG 2 cut(s) 512, 1254
HpySE526I ACGT 2 cut(s) 80, 798
Hsp92II CATG 6 cut(s) 39, 343, 587, 1016, 1127, 1136
HspAI GCGC 1 cut(s) 1017
Ksp22I TGATCA 3 cut(s) 634, 891, 1111
KspAI GTTAAC 1 cut(s) 577
Kzo9I GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
LmnI GCTCC 1 cut(s) 908
Lsp1109I GCAGC 3 cut(s) 343, 346, 365
LweI GCATC 3 cut(s) 330, 393, 827
MaeI CTAG 5 cut(s) 138, 200, 647, 839, 1154
MaeII ACGT 2 cut(s) 80, 798
MalI GATC 9 cut(s) 314, 525, 598, 636, 656, 680, 893, 1113, 1300
MboI GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
MboII GAAGA 7 cut(s) 77, 319, 322, 500, 591, 689, 752
MflI RGATCY 4 cut(s) 523, 596, 654, 1298
MhlI GDGCHC 2 cut(s) 498, 991
MlsI TGGCCA 1 cut(s) 236
MluCI AATT 7 cut(s) 125, 247, 335, 412, 1051, 1163, 1309
MluNI TGGCCA 1 cut(s) 236
MlyI GAGTC 2 cut(s) 482, 1030
MmeI TCCRAC 1 cut(s) 171
MnlI CCTC 9 cut(s) 207, 401, 705, 736, 948, 962, 1176, 1228, 1242
Mox20I TGGCCA 1 cut(s) 236
MroXI GAANNNNTTC 1 cut(s) 1080
MscI TGGCCA 1 cut(s) 236
MseI TTAA 3 cut(s) 519, 576, 909
Msp20I TGGCCA 1 cut(s) 236
MspA1I CMGCKG 2 cut(s) 356, 716
MspI CCGG 3 cut(s) 155, 302, 491
MspR9I CCNGG 3 cut(s) 155, 491, 900
MvaI CCWGG 1 cut(s) 900
MwoI GCNNNNNNNGC 6 cut(s) 242, 359, 772, 1016, 1025, 1129
NciI CCSGG 2 cut(s) 155, 491
NdeII GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
NlaIII CATG 6 cut(s) 39, 343, 587, 1016, 1127, 1136
NlaIV GGNNCC 7 cut(s) 33, 489, 495, 720, 904, 990, 1083
NspI RCATGY 2 cut(s) 1127, 1136
NspV TTCGAA 2 cut(s) 264, 449
PaeI GCATGC 1 cut(s) 1127
PaqCI CACCTGC 1 cut(s) 326
PdmI GAANNNNTTC 1 cut(s) 1080
PfeI GAWTC 2 cut(s) 175, 1344
PkrI GCNGC 5 cut(s) 355, 358, 361, 409, 718
PleI GAGTC 2 cut(s) 481, 1030
PpsI GAGTC 2 cut(s) 481, 1030
Psp6I CCWGG 1 cut(s) 898
PspGI CCWGG 1 cut(s) 898
PspN4I GGNNCC 7 cut(s) 33, 489, 495, 720, 904, 990, 1083
PspPI GGNCC 3 cut(s) 487, 692, 718
PstI CTGCAG 1 cut(s) 355
PstNI CAGNNNCTG 2 cut(s) 359, 476
PsuI RGATCY 4 cut(s) 523, 596, 654, 1298
PvuII CAGCTG 1 cut(s) 356
RsaI GTAC 4 cut(s) 79, 344, 397, 675
RsaNI GTAC 4 cut(s) 78, 343, 396, 674
SaqAI TTAA 3 cut(s) 519, 576, 909
SatI GCNGC 5 cut(s) 354, 357, 360, 408, 717
Sau3AI GATC 9 cut(s) 312, 523, 596, 634, 654, 678, 891, 1111, 1298
Sau96I GGNCC 3 cut(s) 487, 692, 718
SchI GAGTC 2 cut(s) 482, 1030
ScrFI CCNGG 3 cut(s) 155, 491, 900
SduI GDGCHC 2 cut(s) 498, 991
SfaNI GCATC 3 cut(s) 330, 393, 827
SfcI CTRYAG 1 cut(s) 351
SfuI TTCGAA 2 cut(s) 264, 449
SinI GGWCC 1 cut(s) 487
SmlI CTYRAG 2 cut(s) 282, 939
SmoI CTYRAG 2 cut(s) 282, 939
SphI GCATGC 1 cut(s) 1127
Sse9I AATT 7 cut(s) 125, 247, 335, 412, 1051, 1163, 1309
SsiI CCGC 2 cut(s) 407, 716
SspMI CTAG 5 cut(s) 138, 200, 647, 839, 1154
StyD4I CCNGG 3 cut(s) 153, 489, 898
StyI CCWWGG 1 cut(s) 46
TaaI ACNGT 5 cut(s) 193, 433, 625, 914, 1101
TaiI ACGT 2 cut(s) 83, 801
TaqI TCGA 4 cut(s) 92, 257, 264, 449
TasI AATT 7 cut(s) 125, 247, 335, 412, 1051, 1163, 1309
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 410, 719
TfiI GAWTC 2 cut(s) 175, 1344
Tru1I TTAA 3 cut(s) 519, 576, 909
Tru9I TTAA 3 cut(s) 519, 576, 909
TscAI CASTG 3 cut(s) 409, 436, 1297
TseI GCWGC 3 cut(s) 353, 356, 359
TspDTI ATGAA 7 cut(s) 157, 328, 348, 434, 494, 964, 1277
TspGWI ACGGA 1 cut(s) 383
TspRI CASTG 3 cut(s) 409, 436, 1297
VpaK11BI GGWCC 1 cut(s) 487
XapI RAATTY 2 cut(s) 335, 1051
XceI RCATGY 2 cut(s) 1127, 1136
XmnI GAANNNNTTC 1 cut(s) 1080
XspI CTAG 5 cut(s) 138, 200, 647, 839, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.