AT3G46720

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000714
Physical Location & Seq
Reverse (-)
17210619 .. 17212541
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46720.1

Sequence Viewer

Length: 1344 bp
ATGGAGAAAAATGCAGAGAAGAAAAGAATAGTGTTGGTTCCATTTCCATTACAAGGACATATCACTCCAATGATGCAACTTGGTCAAGCACTTAACCTGAAAGGCTTCTCGATTACCGTTGCTCTTGGAGATTCCAATCGAGTAAGTTCTACGCAACACTTCCCTGGTTTTCAATTTGTCACAATACCTGAAACCATACCACTATCTCAACACGAGGCACTCGGAGTTGTCGAGTTTGTGGTTACGCTCAACAAAACAAGCGAGACAAGTTTCAAGGACTGTATAGCTCATTTGTTGCTGCAACATGGAAATGATATTGCTTGTATCATTTACGACGAGCTCATGTACTTCTCTGAAGCTACAGCTAAGGATTTAAGGATTCCTAGTGTCATATTCACCACTGGTAGTGCTACAAATCATGTTTGTTCTTGTATTTTAAGCAAACTCAACGCCGAGAAGTTCTTGATCGACATGAAAGATCCTGAAGTGCAAAACATGGTGGTGGAAAATTTACATCCACTAAAATACAAAGACTTACCAACTTCAGGAATGGGGCCGCTAGAGCGATTTTTGGAGATTTGTGCCGAAGTTGTCAACAAAAGAACAGCTTCCGCTGTTATAATCAATACGTCAAGTTGTCTAGAGAGCTCGTCTCTGTCATGGCTGAAACAAGAACTCAGTATTCCAGTGTATCCATTAGGCCCTCTTCACATTACAACTTCAGCAAATTTTAGTTTACTTGAAGAGGACAGGAGCTGCATTGAATGGCTGAACAAGCAGAAACTGAGGTCAGTTATATACATAAGCGTAGGAAGCATAGCTCACATGGAAACCAAGGAAGTATTGGAGATGGCTTGGGGATTGTATAATAGCAACCAACCTTTTCTATGGGTAATCCGACCCGGTACAGAGTCAATGCCAGTGGAAGTCAGTAAGATTGTCTCGGAAAGAGGATGCATTGTGAAATGGGCGCCACAGAATGAAGTACTTGTGCATCCTGCAGTGGGAGGTTTCTGGAGCCACTGTGGATGGAACTCAACACTCGAGAGTATTGTGGAAGGAGTTCCAATGATTTGCAGACCGTTTAACGGTGAGCAGAAGTTAAACGCGATGTATATAGAAAGTGTTTGGAGAGTAGGGGTTCTGCTTCAAGGAGAAGTGGAGAGAGGATGTGTAGAGAGAGCTGTGAAGAGGTTGATTGTGGATGATGAAGGTGTAGGAATGAGGGAGAGAGCCCTTGTTTTAAAAGAGAAGCTCAATGCCTCTGTAAGAAGTGGAGGCTCTTCATACAATGCATTGGATGAGCTCGTCCATTACTTGGAGGCAGAGTATAGAAATACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0002239 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008194 GO:0009308 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009628 GO:0009690 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009894 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010118 GO:0010150 GO:0010154 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0022414 GO:0023052 GO:0031537 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034754 GO:0035251 GO:0042221 GO:0042445 GO:0042631 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046527 GO:0047254 GO:0047807 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050139 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0052640 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0080043 GO:0080044 GO:0080062 GO:0080090 GO:0090693 GO:0097305 GO:0097306 GO:0099402 GO:0104004 GO:1900000 GO:1901527 GO:1901564 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko00140 ko00380 ko00402 ko00830 ko00908 ko00980 ko01100 ko01110 ko04913 ko05204 map00140 map00380 map00402 map00830 map00908 map00980 map01100 map01110 map04913 map05204
Pfam Domains
Protein Families
UDPGT

Protein Analysis

447

Amino Acids

49.88

Weight (kDa)

5.71

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 261 - 403 2.6e-28 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 620
AccB1I GGYRCC 1 cut(s) 970
AccB7I CCANNNNNTGG 1 cut(s) 1318
AccII CGCG 1 cut(s) 1109
AciI CCGC 2 cut(s) 557, 612
AclWI GGATC 1 cut(s) 473
AcsI RAATTY 2 cut(s) 508, 727
AcuI CTGAAG 4 cut(s) 375, 504, 528, 705
AcyI GRCGYC 1 cut(s) 971
AfaI GTAC 3 cut(s) 347, 907, 987
AfiI CCNNNNNNNGG 5 cut(s) 53, 545, 1004, 1088, 1318
AgsI TTSAA 5 cut(s) 173, 274, 743, 764, 1151
AjnI CCWGG 1 cut(s) 163
Alw21I GWGCWC 3 cut(s) 342, 650, 1308
Alw26I GTCTC 3 cut(s) 257, 657, 946
AlwI GGATC 1 cut(s) 473
AlwNI CAGNNNCTG 2 cut(s) 756, 784
Ama87I CYCGRG 1 cut(s) 1043
AoxI GGCC 2 cut(s) 554, 700
ApeKI GCWGC 2 cut(s) 298, 756
ApoI RAATTY 2 cut(s) 508, 727
Asp700I GAANNNNTTC 3 cut(s) 104, 607, 1062
AspLEI GCGC 1 cut(s) 973
AspS9I GGNCC 2 cut(s) 554, 701
AsuC2I CCSGG 1 cut(s) 903
AsuHPI GGTGA 2 cut(s) 388, 1103
AvaI CYCGRG 1 cut(s) 1043
BanI GGYRCC 1 cut(s) 970
BanII GRGCYC 4 cut(s) 342, 650, 1237, 1308
BauI CACGAG 1 cut(s) 212
Bbv12I GWGCWC 3 cut(s) 342, 650, 1308
BbvI GCAGC 2 cut(s) 285, 743
BccI CCATC 2 cut(s) 844, 1023
BciT130I CCWGG 1 cut(s) 165
BciVI GTATCC 1 cut(s) 702
BcnI CCSGG 1 cut(s) 903
BcoDI GTCTC 3 cut(s) 257, 657, 946
BfaI CTAG 3 cut(s) 384, 560, 641
BfmI CTRYAG 2 cut(s) 360, 999
BfoI RGCGCY 1 cut(s) 974
BfuI GTATCC 1 cut(s) 702
BisI GCNGC 3 cut(s) 299, 557, 757
BlsI GCNGC 3 cut(s) 300, 558, 758
BmcAI AGTACT 1 cut(s) 987
Bme1390I CCNGG 2 cut(s) 165, 903
BmeT110I CYCGRG 1 cut(s) 1043
BmgT120I GGNCC 2 cut(s) 554, 701
BmiI GGNNCC 4 cut(s) 39, 555, 972, 1019
BmrFI CCNGG 2 cut(s) 165, 903
BmsI GCATC 3 cut(s) 63, 944, 1003
BplI GAGNNNNNCTC 2 cut(s) 637, 669
BpmI CTGGAG 1 cut(s) 1036
Bpu10I CCTNAGC 1 cut(s) 366
BpuMI CCSGG 1 cut(s) 903
BsaBI GATNNNNATC 1 cut(s) 135
BsaHI GRCGYC 1 cut(s) 971
BsaJI CCNNGG 2 cut(s) 163, 834
BsaXI ACNNNNNCTCC 4 cut(s) 1009, 1039, 1313, 1343
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 545, 1004, 1088, 1318
Bse1I ACTGG 3 cut(s) 406, 686, 920
Bse8I GATNNNNATC 1 cut(s) 135
BseBI CCWGG 1 cut(s) 165
BseDI CCNNGG 2 cut(s) 163, 834
BseGI GGATG 7 cut(s) 514, 959, 994, 1034, 1175, 1210, 1306
BseJI GATNNNNATC 1 cut(s) 135
BseLI CCNNNNNNNGG 5 cut(s) 53, 545, 1004, 1088, 1318
BseMII CTCAG 2 cut(s) 691, 776
BseNI ACTGG 3 cut(s) 406, 686, 920
BseXI GCAGC 2 cut(s) 285, 743
Bsh1236I CGCG 1 cut(s) 1109
BshFI GGCC 2 cut(s) 556, 702
BshNI GGYRCC 1 cut(s) 970
BsiHKAI GWGCWC 3 cut(s) 342, 650, 1308
BsiHKCI CYCGRG 1 cut(s) 1043
BsiSI CCGG 1 cut(s) 903
BslI CCNNNNNNNGG 5 cut(s) 53, 545, 1004, 1088, 1318
BsmAI GTCTC 3 cut(s) 257, 657, 946
BsmBI CGTCTC 1 cut(s) 657
BsnI GGCC 2 cut(s) 556, 702
BsoBI CYCGRG 1 cut(s) 1043
Bsp1286I GDGCHC 4 cut(s) 342, 650, 1237, 1308
Bsp143I GATC 2 cut(s) 465, 478
BspACI CCGC 2 cut(s) 557, 612
BspANI GGCC 2 cut(s) 556, 702
BspCNI CTCAG 2 cut(s) 690, 777
BspFNI CGCG 1 cut(s) 1109
BspLI GGNNCC 4 cut(s) 39, 555, 972, 1019
BspMAI CTGCAG 1 cut(s) 1003
BspPI GGATC 1 cut(s) 473
BspQI GCTCTTC 1 cut(s) 1288
BspT107I GGYRCC 1 cut(s) 970
BsrI ACTGG 3 cut(s) 406, 686, 920
BssECI CCNNGG 2 cut(s) 163, 834
BssMI GATC 2 cut(s) 465, 478
BssNI GRCGYC 1 cut(s) 971
BssSI CACGAG 1 cut(s) 212
BssT1I CCWWGG 1 cut(s) 834
Bst2BI CACGAG 1 cut(s) 212
Bst2UI CCWGG 1 cut(s) 165
Bst4CI ACNGT 5 cut(s) 118, 281, 1025, 1083, 1091
Bst6I CTCTTC 4 cut(s) 711, 738, 1184, 1288
BstACI GRCGYC 1 cut(s) 971
BstDEI CTNAG 3 cut(s) 366, 677, 785
BstF5I GGATG 7 cut(s) 514, 959, 994, 1034, 1175, 1210, 1306
BstFNI CGCG 1 cut(s) 1109
BstH2I RGCGCY 1 cut(s) 974
BstHHI GCGC 1 cut(s) 973
BstKTI GATC 2 cut(s) 468, 481
BstMAI GTCTC 3 cut(s) 257, 657, 946
BstMBI GATC 2 cut(s) 465, 478
BstMWI GCNNNNNNNGC 3 cut(s) 562, 775, 813
BstNI CCWGG 1 cut(s) 165
BstSCI CCNGG 2 cut(s) 163, 901
BstSFI CTRYAG 2 cut(s) 360, 999
BstUI CGCG 1 cut(s) 1109
BstV1I GCAGC 2 cut(s) 285, 743
BstX2I RGATCY 1 cut(s) 478
BstYI RGATCY 1 cut(s) 478
BsuI GTATCC 1 cut(s) 702
BsuRI GGCC 2 cut(s) 556, 702
BtgZI GCGATG 1 cut(s) 1124
BtsCI GGATG 7 cut(s) 514, 959, 994, 1034, 1175, 1210, 1306
BtsI GCAGTG 1 cut(s) 1008
BtsIMutI CAGTG 5 cut(s) 399, 693, 927, 1008, 1021
CaiI CAGNNNCTG 2 cut(s) 756, 784
CfoI GCGC 1 cut(s) 973
Cfr13I GGNCC 2 cut(s) 554, 701
Csp6I GTAC 3 cut(s) 346, 906, 986
CspCI CAANNNNNGTGG 2 cut(s) 903, 938
CviAII CATG 7 cut(s) 305, 343, 419, 472, 496, 660, 826
CviQI GTAC 3 cut(s) 346, 906, 986
DdeI CTNAG 3 cut(s) 366, 677, 785
DinI GGCGCC 1 cut(s) 972
DpnI GATC 2 cut(s) 467, 480
DpnII GATC 2 cut(s) 465, 478
DraI TTTAAA 1 cut(s) 1245
Eam1104I CTCTTC 4 cut(s) 711, 738, 1184, 1288
EarI CTCTTC 4 cut(s) 711, 738, 1184, 1288
Ecl136II GAGCTC 3 cut(s) 340, 648, 1306
Eco130I CCWWGG 1 cut(s) 834
Eco24I GRGCYC 4 cut(s) 342, 650, 1237, 1308
Eco53kI GAGCTC 3 cut(s) 340, 648, 1306
Eco57I CTGAAG 4 cut(s) 375, 504, 528, 705
Eco88I CYCGRG 1 cut(s) 1043
EcoICRI GAGCTC 3 cut(s) 340, 648, 1306
EcoO109I RGGNCCY 1 cut(s) 701
EcoRII CCWGG 1 cut(s) 163
EcoT14I CCWWGG 1 cut(s) 834
EcoT22I ATGCAT 2 cut(s) 959, 1297
EcoT38I GRGCYC 4 cut(s) 342, 650, 1237, 1308
EgeI GGCGCC 1 cut(s) 972
EheI GGCGCC 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 834
Esp3I CGTCTC 1 cut(s) 657
FaeI CATG 7 cut(s) 308, 346, 422, 475, 499, 663, 829
FalI AAGNNNNNCTT 2 cut(s) 592, 624
FatI CATG 7 cut(s) 304, 342, 418, 471, 495, 659, 825
Fnu4HI GCNGC 3 cut(s) 299, 557, 757
FokI GGATG 7 cut(s) 501, 966, 981, 1041, 1182, 1217, 1313
FriOI GRGCYC 4 cut(s) 342, 650, 1237, 1308
Fsp4HI GCNGC 3 cut(s) 299, 557, 757
FspBI CTAG 3 cut(s) 384, 560, 641
GlaI GCGC 1 cut(s) 972
GluI GCNGC 3 cut(s) 299, 557, 757
GsuI CTGGAG 1 cut(s) 1036
HaeII RGCGCY 1 cut(s) 974
HaeIII GGCC 2 cut(s) 556, 702
HapII CCGG 1 cut(s) 903
HhaI GCGC 1 cut(s) 973
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 7 cut(s) 308, 346, 422, 475, 499, 663, 829
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HinfI GANTC 3 cut(s) 131, 379, 911
HpaII CCGG 1 cut(s) 903
HphI GGTGA 2 cut(s) 388, 1103
Hpy166II GTNNAC 2 cut(s) 595, 737
Hpy188I TCNGA 4 cut(s) 224, 355, 899, 946
Hpy188III TCNNGA 7 cut(s) 109, 463, 482, 546, 641, 1015, 1045
Hpy8I GTNNAC 2 cut(s) 595, 737
Hpy99I CGWCG 1 cut(s) 338
HpyAV CCTTC 2 cut(s) 1052, 1205
HpyCH4III ACNGT 5 cut(s) 118, 281, 1025, 1083, 1091
HpyCH4IV ACGT 1 cut(s) 629
HpyF10VI GCNNNNNNNGC 3 cut(s) 562, 775, 813
HpyF3I CTNAG 3 cut(s) 366, 677, 785
HpySE526I ACGT 1 cut(s) 629
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 7 cut(s) 308, 346, 422, 475, 499, 663, 829
HspAI GCGC 1 cut(s) 971
KasI GGCGCC 1 cut(s) 970
Kzo9I GATC 2 cut(s) 465, 478
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 2 cut(s) 753, 1017
Lsp1109I GCAGC 2 cut(s) 285, 743
LweI GCATC 3 cut(s) 63, 944, 1003
MaeI CTAG 3 cut(s) 384, 560, 641
MaeII ACGT 1 cut(s) 629
MaeIII GTNAC 2 cut(s) 178, 241
MalI GATC 2 cut(s) 467, 480
MboI GATC 2 cut(s) 465, 478
MboII GAAGA 5 cut(s) 31, 698, 755, 1201, 1275
MflI RGATCY 1 cut(s) 478
MhlI GDGCHC 4 cut(s) 342, 650, 1237, 1308
MluCI AATT 3 cut(s) 173, 508, 727
Mly113I GGCGCC 1 cut(s) 971
MlyI GAGTC 1 cut(s) 920
MmeI TCCRAC 1 cut(s) 922
Mph1103I ATGCAT 2 cut(s) 959, 1297
MroXI GAANNNNTTC 3 cut(s) 104, 607, 1062
MseI TTAA 6 cut(s) 93, 374, 437, 1086, 1103, 1244
MslI CAYNNNNRTG 3 cut(s) 68, 309, 500
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 1 cut(s) 903
MspR9I CCNGG 2 cut(s) 165, 903
MvaI CCWGG 1 cut(s) 165
MvnI CGCG 1 cut(s) 1109
MwoI GCNNNNNNNGC 3 cut(s) 562, 775, 813
NarI GGCGCC 1 cut(s) 971
NciI CCSGG 1 cut(s) 903
NdeII GATC 2 cut(s) 465, 478
NlaIII CATG 7 cut(s) 308, 346, 422, 475, 499, 663, 829
NlaIV GGNNCC 4 cut(s) 39, 555, 972, 1019
NmeAIII GCCGAG 1 cut(s) 478
NmuCI GTSAC 1 cut(s) 178
NsiI ATGCAT 2 cut(s) 959, 1297
PaeR7I CTCGAG 1 cut(s) 1043
PciSI GCTCTTC 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PdmI GAANNNNTTC 3 cut(s) 104, 607, 1062
PfeI GAWTC 2 cut(s) 131, 379
PflMI CCANNNNNTGG 1 cut(s) 1318
PkrI GCNGC 3 cut(s) 300, 558, 758
PleI GAGTC 1 cut(s) 919
PluTI GGCGCC 1 cut(s) 974
PpsI GAGTC 1 cut(s) 919
PsiI TTATAA 1 cut(s) 620
Psp124BI GAGCTC 3 cut(s) 342, 650, 1308
Psp6I CCWGG 1 cut(s) 163
PspGI CCWGG 1 cut(s) 163
PspN4I GGNNCC 4 cut(s) 39, 555, 972, 1019
PspPI GGNCC 2 cut(s) 554, 701
PstI CTGCAG 1 cut(s) 1003
PstNI CAGNNNCTG 2 cut(s) 756, 784
PsuI RGATCY 1 cut(s) 478
RsaI GTAC 3 cut(s) 347, 907, 987
RsaNI GTAC 3 cut(s) 346, 906, 986
RseI CAYNNNNRTG 3 cut(s) 68, 309, 500
SacI GAGCTC 3 cut(s) 342, 650, 1308
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 6 cut(s) 93, 374, 437, 1086, 1103, 1244
SatI GCNGC 3 cut(s) 299, 557, 757
Sau3AI GATC 2 cut(s) 465, 478
Sau96I GGNCC 2 cut(s) 554, 701
ScaI AGTACT 1 cut(s) 987
SchI GAGTC 1 cut(s) 920
ScrFI CCNGG 2 cut(s) 165, 903
SduI GDGCHC 4 cut(s) 342, 650, 1237, 1308
SfaNI GCATC 3 cut(s) 63, 944, 1003
SfcI CTRYAG 2 cut(s) 360, 999
SfoI GGCGCC 1 cut(s) 972
Sfr274I CTCGAG 1 cut(s) 1043
SlaI CTCGAG 1 cut(s) 1043
SmiMI CAYNNNNRTG 3 cut(s) 68, 309, 500
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
Sse9I AATT 3 cut(s) 173, 508, 727
SsiI CCGC 2 cut(s) 557, 612
SspDI GGCGCC 1 cut(s) 970
SspMI CTAG 3 cut(s) 384, 560, 641
SstI GAGCTC 3 cut(s) 342, 650, 1308
StyD4I CCNGG 2 cut(s) 163, 901
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 5 cut(s) 118, 281, 1025, 1083, 1091
TaiI ACGT 1 cut(s) 632
TaqI TCGA 5 cut(s) 110, 139, 231, 468, 1044
TasI AATT 3 cut(s) 173, 508, 727
TatI WGTACW 2 cut(s) 345, 985
TauI GCSGC 1 cut(s) 559
TfiI GAWTC 2 cut(s) 131, 379
Tru1I TTAA 6 cut(s) 93, 374, 437, 1086, 1103, 1244
Tru9I TTAA 6 cut(s) 93, 374, 437, 1086, 1103, 1244
TscAI CASTG 5 cut(s) 406, 693, 927, 1008, 1028
TseFI GTSAC 1 cut(s) 178
TseI GCWGC 2 cut(s) 298, 756
Tsp45I GTSAC 1 cut(s) 178
TspDTI ATGAA 4 cut(s) 488, 996, 1224, 1275
TspRI CASTG 5 cut(s) 406, 693, 927, 1008, 1028
Van91I CCANNNNNTGG 1 cut(s) 1318
XapI RAATTY 2 cut(s) 508, 727
XbaI TCTAGA 1 cut(s) 640
XcmI CCANNNNNNNNNTGG 1 cut(s) 841
XhoI CTCGAG 1 cut(s) 1043
XmnI GAANNNNTTC 3 cut(s) 104, 607, 1062
XspI CTAG 3 cut(s) 384, 560, 641
ZrmI AGTACT 1 cut(s) 987
Zsp2I ATGCAT 2 cut(s) 959, 1297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.