AT3G50280

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
18637735 .. 18639475
1741 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G50280.1

Sequence Viewer

Length: 1332 bp
ATGGCCGACGTAACTTTTATTTCCTCAAGCATTGTTCGACCTCAAATCATAAACCAAGAAGGTCGTGAAAAGATCCATCTAACTCCATTTGATCTTAATCTTCTCTATGTTGATTATACTCAAAGAGGTCTTCTCTTCCCCAAACCCGACCCGGAAACCCATTTCATCTCTCGATTAAGAACCTCTCTTTCTTCTGCTCTAGATATTTACTTCCCCTTCGCTGGTCGTCTTAACAAAGTTGAAAATCATGAAGACGAAACGGTGTCGTTTTACATCAATTGTGACGGCTCTGGTGCTAAATTCATCCATGCCGTATCCGATTCTGTTTCGGTAAGCGATCTTCTTCGACCTGATGGCTCTGTTCCTGACTTTTTCAGGATTTTCTATCCCATGAACGGTGTCAAAAGCATCGACGGCCTCTCGGAGCCCTTGCTTGCTTTACAAGTTACCGAGATGAGAGATGGAGTTTTCATCGGTTTTGGTTACAATCACATGGTCGCAGACGGTGCTTCCATCTGGAATTTCTTCAGGACTTGGTCAAAGATTTGCTCTAATGGTCAACGGGAGAATCTTCAACCTCTTGCTCTCAAAGGATTGTTCGTGGACGGGATGGATTTCCCGATACATATTCCGGTTTCAGACACAGAGACGTCACCACCAAGCCGTGAGCTTTCTCCGACATTCAAAGAGAGAGTTTTTCACTTCACAAAGAGGAATATCTCAGATCTCAAAGCTAAAGTCAACGGAGAAATTGGCTTGCGTGACCATAAAGTCTCGTCCTTACAAGCGGTCTCGGCTCACATGTGGCGATCAATCATTAGACACAGTGGTCTAAACCAAGAAGAAAAGACGCGTTGCTTTGTAGCAGTGGATCTAAGGCAGAGACTAAACCCTCCGCTTGACAAAGAGTGTTTTGGTCATGTGATCTATAACTCGGTAGTTACAACCACAGTGGGGGAGTTGCATGATCAGGGTCTAGGGTGGGCTTTTTTGCAAATAAATAATATGTTGAGATCTTTGACGAATGAAGACTATAGAATTTATGCTGAGAATTGGGTTAGAAATATGAAGATTCAAAAATCAGGTCTTGGAAGTAAAATGACTAGGGACTCTGTAATTGTGTCAAGCTCTCCTCGGTTTGAAGTGTACGATAACGATTTCGGTTGGGGCAAACCGATAGCGGTTCGAGCTGGACCGAGTAACAGTATTAGTGGCAAACTCGTGTTTTTTCGTGGGATTGAAGAAGGCTGTATTGATGTTCATGCGTTTCTATTGCCCGACGTACTTGTGAAACTACTGGCTGACGTGGAATTTCTGGAGAAGTGTGGCTAG

Protein Analysis

443

Amino Acids

49.96

Weight (kDa)

6.24

Isoelectric Point (pI)

35.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 3 - 437 5.6e-71 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 770, 828
AatII GACGTC 1 cut(s) 653
AccII CGCG 1 cut(s) 853
AciI CCGC 3 cut(s) 788, 896, 1181
AclWI GGATC 2 cut(s) 67, 879
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 299, 520, 1038, 1310
AcuI CTGAAG 1 cut(s) 511
AcyI GRCGYC 1 cut(s) 650
AfaI GTAC 2 cut(s) 1148, 1284
AfiI CCNNNNNNNGG 3 cut(s) 221, 395, 954
AflIII ACRYGT 2 cut(s) 801, 851
AgsI TTSAA 6 cut(s) 242, 575, 685, 1076, 1142, 1241
AjiI CACGTC 1 cut(s) 1306
AluBI AGCT 4 cut(s) 670, 734, 1128, 1190
AluI AGCT 4 cut(s) 670, 734, 1128, 1190
Alw26I GTCTC 4 cut(s) 641, 778, 796, 877
AlwI GGATC 2 cut(s) 67, 879
AoxI GGCC 2 cut(s) 3, 415
ApoI RAATTY 4 cut(s) 299, 520, 1038, 1310
ArsI GACNNNNNNTTYG 4 cut(s) 723, 755, 1069, 1101
Asp700I GAANNNNTTC 1 cut(s) 524
AspS9I GGNCC 1 cut(s) 1193
AsuC2I CCSGG 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 645
AvaII GGWCC 1 cut(s) 1193
BanII GRGCYC 1 cut(s) 429
BarI GAAGNNNNNNTAC 2 cut(s) 324, 356
BauI CACGAG 1 cut(s) 1220
BbsI GAAGAC 3 cut(s) 122, 258, 1035
BccI CCATC 5 cut(s) 84, 347, 455, 521, 604
BceAI ACGGC 4 cut(s) 296, 301, 430, 648
BciVI GTATCC 1 cut(s) 325
BclI TGATCA 1 cut(s) 967
BcnI CCSGG 1 cut(s) 152
BcoDI GTCTC 4 cut(s) 641, 778, 796, 877
BfaI CTAG 4 cut(s) 200, 977, 1104, 1330
BfmI CTRYAG 1 cut(s) 1033
BfuI GTATCC 1 cut(s) 325
BglII AGATCT 2 cut(s) 724, 1013
Bme1390I CCNGG 1 cut(s) 152
Bme18I GGWCC 1 cut(s) 1193
BmgBI CACGTC 1 cut(s) 1306
BmgT120I GGNCC 1 cut(s) 1193
BmiI GGNNCC 1 cut(s) 426
BmrFI CCNGG 1 cut(s) 152
BmsI GCATC 1 cut(s) 417
BpiI GAAGAC 3 cut(s) 122, 258, 1035
BplI GAGNNNNNCTC 2 cut(s) 117, 149
BpuEI CTTGAG 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 152
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 1 cut(s) 650
BsaI GGTCTC 1 cut(s) 796
BsaJI CCNNGG 1 cut(s) 1133
BsaWI WCCGGW 1 cut(s) 631
Bsc4I CCNNNNNNNGG 3 cut(s) 221, 395, 954
Bse1I ACTGG 1 cut(s) 1302
Bse8I GATNNNNATC 1 cut(s) 96
BseDI CCNNGG 1 cut(s) 1133
BseGI GGATG 2 cut(s) 303, 615
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 3 cut(s) 221, 395, 954
BseMII CTCAG 2 cut(s) 735, 1038
BseNI ACTGG 1 cut(s) 1302
BseRI GAGGAG 1 cut(s) 1122
Bsh1236I CGCG 1 cut(s) 853
BshFI GGCC 2 cut(s) 5, 417
BsiSI CCGG 2 cut(s) 152, 632
BslFI GGGAC 1 cut(s) 1121
BslI CCNNNNNNNGG 3 cut(s) 221, 395, 954
BsmAI GTCTC 4 cut(s) 641, 778, 796, 877
BsmBI CGTCTC 1 cut(s) 641
BsmFI GGGAC 1 cut(s) 1121
BsnI GGCC 2 cut(s) 5, 417
Bso31I GGTCTC 1 cut(s) 796
Bsp1286I GDGCHC 1 cut(s) 429
Bsp143I GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
BspACI CCGC 3 cut(s) 788, 896, 1181
BspANI GGCC 2 cut(s) 5, 417
BspCNI CTCAG 2 cut(s) 734, 1039
BspFNI CGCG 1 cut(s) 853
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 426
BspPI GGATC 2 cut(s) 67, 879
BspTNI GGTCTC 1 cut(s) 796
BsrI ACTGG 1 cut(s) 1302
BssECI CCNNGG 1 cut(s) 1133
BssMI GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
BssNI GRCGYC 1 cut(s) 650
BssSI CACGAG 1 cut(s) 1220
Bst2BI CACGAG 1 cut(s) 1220
Bst4CI ACNGT 6 cut(s) 262, 398, 506, 827, 952, 1205
Bst6I CTCTTC 1 cut(s) 140
BstACI GRCGYC 1 cut(s) 650
BstAPI GCANNNNNTGC 1 cut(s) 506
BstC8I GCNNGC 2 cut(s) 435, 758
BstDEI CTNAG 3 cut(s) 721, 875, 1047
BstF5I GGATG 2 cut(s) 303, 615
BstFNI CGCG 1 cut(s) 853
BstKTI GATC 9 cut(s) 75, 94, 340, 727, 812, 874, 927, 970, 1016
BstMAI GTCTC 4 cut(s) 641, 778, 796, 877
BstMBI GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
BstMWI GCNNNNNNNGC 4 cut(s) 414, 506, 794, 1187
BstNSI RCATGY 1 cut(s) 805
BstSCI CCNGG 1 cut(s) 150
BstSFI CTRYAG 1 cut(s) 1033
BstUI CGCG 1 cut(s) 853
BstV2I GAAGAC 3 cut(s) 122, 258, 1035
BstX2I RGATCY 4 cut(s) 72, 724, 871, 1013
BstYI RGATCY 4 cut(s) 72, 724, 871, 1013
BsuI GTATCC 1 cut(s) 325
BsuRI GGCC 2 cut(s) 5, 417
BtrI CACGTC 1 cut(s) 1306
BtsCI GGATG 2 cut(s) 303, 615
BtsI GCAGTG 1 cut(s) 873
BtsIMutI CAGTG 3 cut(s) 832, 873, 957
Cac8I GCNNGC 2 cut(s) 435, 758
CciI TCATGA 1 cut(s) 247
Cfr13I GGNCC 1 cut(s) 1193
CseI GACGC 1 cut(s) 859
Csp6I GTAC 2 cut(s) 1147, 1283
CspCI CAANNNNNGTGG 2 cut(s) 933, 968
CviAII CATG 8 cut(s) 248, 308, 391, 493, 802, 920, 965, 1262
CviQI GTAC 2 cut(s) 1147, 1283
DdeI CTNAG 3 cut(s) 721, 875, 1047
DpnI GATC 9 cut(s) 74, 93, 339, 726, 811, 873, 926, 969, 1015
DpnII GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
DrdI GACNNNNNNGTC 2 cut(s) 770, 828
DseDI GACNNNNNNGTC 2 cut(s) 770, 828
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco24I GRGCYC 1 cut(s) 429
Eco31I GGTCTC 1 cut(s) 796
Eco47I GGWCC 1 cut(s) 1193
Eco57I CTGAAG 1 cut(s) 511
EcoT38I GRGCYC 1 cut(s) 429
Esp3I CGTCTC 1 cut(s) 641
FaeI CATG 8 cut(s) 251, 311, 394, 496, 805, 923, 968, 1265
FaqI GGGAC 1 cut(s) 1121
FatI CATG 8 cut(s) 247, 307, 390, 492, 801, 919, 964, 1261
FbaI TGATCA 1 cut(s) 967
FokI GGATG 2 cut(s) 290, 622
FriOI GRGCYC 1 cut(s) 429
FspBI CTAG 4 cut(s) 200, 977, 1104, 1330
HaeIII GGCC 2 cut(s) 5, 417
HapII CCGG 2 cut(s) 152, 632
HgaI GACGC 1 cut(s) 859
Hin1I GRCGYC 1 cut(s) 650
Hin1II CATG 8 cut(s) 251, 311, 394, 496, 805, 923, 968, 1265
HincII GTYRAC 2 cut(s) 560, 742
HindII GTYRAC 2 cut(s) 560, 742
HinfI GANTC 4 cut(s) 320, 568, 1072, 1109
HpaII CCGG 2 cut(s) 152, 632
HphI GGTGA 1 cut(s) 645
Hpy166II GTNNAC 4 cut(s) 560, 604, 742, 1147
Hpy188I TCNGA 5 cut(s) 319, 424, 640, 678, 724
Hpy8I GTNNAC 4 cut(s) 560, 604, 742, 1147
Hpy99I CGWCG 3 cut(s) 11, 416, 1283
HpyAV CCTTC 3 cut(s) 53, 226, 1238
HpyCH4III ACNGT 6 cut(s) 262, 398, 506, 827, 952, 1205
HpyCH4IV ACGT 4 cut(s) 9, 650, 1281, 1305
HpyCH4V TGCA 2 cut(s) 964, 994
HpyF10VI GCNNNNNNNGC 4 cut(s) 414, 506, 794, 1187
HpyF3I CTNAG 3 cut(s) 721, 875, 1047
HpySE526I ACGT 4 cut(s) 9, 650, 1281, 1305
Hsp92I GRCGYC 1 cut(s) 650
Hsp92II CATG 8 cut(s) 251, 311, 394, 496, 805, 923, 968, 1265
Ksp22I TGATCA 1 cut(s) 967
Kzo9I GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
LmnI GCTCC 1 cut(s) 424
LweI GCATC 1 cut(s) 417
MaeI CTAG 4 cut(s) 200, 977, 1104, 1330
MaeII ACGT 4 cut(s) 9, 650, 1281, 1305
MaeIII GTNAC 8 cut(s) 10, 281, 445, 482, 651, 761, 940, 1199
MalI GATC 9 cut(s) 74, 93, 339, 726, 811, 873, 926, 969, 1015
MboI GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
MfeI CAATTG 1 cut(s) 277
MflI RGATCY 4 cut(s) 72, 724, 871, 1013
MhlI GDGCHC 1 cut(s) 429
MluCI AATT 8 cut(s) 277, 299, 520, 750, 1038, 1051, 1116, 1310
MluI ACGCGT 1 cut(s) 851
MlyI GAGTC 1 cut(s) 1103
MmeI TCCRAC 1 cut(s) 701
MnlI CCTC 9 cut(s) 34, 51, 119, 193, 428, 588, 705, 903, 1143
MroXI GAANNNNTTC 1 cut(s) 524
MseI TTAA 3 cut(s) 96, 176, 231
MspI CCGG 2 cut(s) 152, 632
MspR9I CCNGG 1 cut(s) 152
MunI CAATTG 1 cut(s) 277
MvnI CGCG 1 cut(s) 853
MwoI GCNNNNNNNGC 4 cut(s) 414, 506, 794, 1187
NciI CCSGG 1 cut(s) 152
NdeII GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
NlaIII CATG 8 cut(s) 251, 311, 394, 496, 805, 923, 968, 1265
NlaIV GGNNCC 1 cut(s) 426
NmeAIII GCCGAG 1 cut(s) 773
NmuCI GTSAC 3 cut(s) 281, 651, 761
NspI RCATGY 1 cut(s) 805
PagI TCATGA 1 cut(s) 247
PciI ACATGT 1 cut(s) 801
PdmI GAANNNNTTC 1 cut(s) 524
PfeI GAWTC 3 cut(s) 320, 568, 1072
PflFI GACNNNGTC 1 cut(s) 535
PleI GAGTC 1 cut(s) 1103
PpsI GAGTC 1 cut(s) 1103
PscI ACATGT 1 cut(s) 801
PspN4I GGNNCC 1 cut(s) 426
PspPI GGNCC 1 cut(s) 1193
PsuI RGATCY 4 cut(s) 72, 724, 871, 1013
PsyI GACNNNGTC 1 cut(s) 535
RsaI GTAC 2 cut(s) 1148, 1284
RsaNI GTAC 2 cut(s) 1147, 1283
SaqAI TTAA 3 cut(s) 96, 176, 231
Sau3AI GATC 9 cut(s) 72, 91, 337, 724, 809, 871, 924, 967, 1013
Sau96I GGNCC 1 cut(s) 1193
SchI GAGTC 1 cut(s) 1103
ScrFI CCNGG 1 cut(s) 152
SduI GDGCHC 1 cut(s) 429
SfaNI GCATC 1 cut(s) 417
SfcI CTRYAG 1 cut(s) 1033
SinI GGWCC 1 cut(s) 1193
SmlI CTYRAG 1 cut(s) 25
SmoI CTYRAG 1 cut(s) 25
Sse9I AATT 8 cut(s) 277, 299, 520, 750, 1038, 1051, 1116, 1310
SsiI CCGC 3 cut(s) 788, 896, 1181
SspMI CTAG 4 cut(s) 200, 977, 1104, 1330
StyD4I CCNGG 1 cut(s) 150
TaaI ACNGT 6 cut(s) 262, 398, 506, 827, 952, 1205
TaiI ACGT 4 cut(s) 12, 653, 1284, 1308
TaqI TCGA 5 cut(s) 37, 172, 346, 411, 1186
TaqII GACCGA 1 cut(s) 1210
TasI AATT 8 cut(s) 277, 299, 520, 750, 1038, 1051, 1116, 1310
TfiI GAWTC 3 cut(s) 320, 568, 1072
Tru1I TTAA 3 cut(s) 96, 176, 231
Tru9I TTAA 3 cut(s) 96, 176, 231
TscAI CASTG 3 cut(s) 832, 873, 957
TseFI GTSAC 3 cut(s) 281, 651, 761
Tsp45I GTSAC 3 cut(s) 281, 651, 761
TspDTI ATGAA 8 cut(s) 154, 264, 292, 407, 460, 1041, 1082, 1250
TspGWI ACGGA 1 cut(s) 759
TspRI CASTG 3 cut(s) 832, 873, 957
Tth111I GACNNNGTC 1 cut(s) 535
VpaK11BI GGWCC 1 cut(s) 1193
XapI RAATTY 4 cut(s) 299, 520, 1038, 1310
XbaI TCTAGA 1 cut(s) 199
XceI RCATGY 1 cut(s) 805
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 4 cut(s) 200, 977, 1104, 1330
ZraI GACGTC 1 cut(s) 651
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.