MD02G1175700.v1.1

Acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000375
Physical Location & Seq
Reverse (-)
15448867 .. 15449700
834 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1175700.v1.1.491

Sequence Viewer

Length: 834 bp
ATGAACCACACTGTTGTTGACGGAACTTCATTTTGGCACTTCTTTAATTCTTGGTCTGAAATTTCTCGTGGTTCTGATTCTGTATCGAAAGCTCATCTTCTTGAGCGTTCGTTTTTTTATGGCACCATTAGCACTCCCATTCGAATTCCCATATTCCCCAATACTCTTGGTCGGGATCAAGTCTTCGATGATAAAGTCATTGACAAGATCAACATCCCGGCTGTTGTACCATTACTAAAAGAAAGAATTTTTCACTTCTCAAGGGAAAAAATTGCTCAACTAAAAGCAAAAGCAAATGCTGAGACTGAAACTGAAAACCCTAATAGAAAAATCTCCTCCTTACAAGCAGTCCTAGCTCATCTTTGGTGGTCCATCATACGTATTCGTATTGGACATGGTCTTCACCCTGACAAAGAGTCTAGTTACCGGTTAATCATAGGCACCAGATCCCGATTGAACCCACCATTGCCACAACAGTATTTTGGCAATGCGCTTCAAGCCGGGACAGTGACCAAGAAAGCAGGCGATGTTCTAGAACGTGGGACTGGTTCTGTGGCTTGGGAAATGAACAAGATGGTAGCTTTGCATACAGAAGAGAAAGTGAGGAGCTTTTTGGAGTGTTGGGTACGAGAGCCGGAGTTTATGACAGTGGACAACTTGACCGGTAAAGCTTTGGTCACGAGCAGTTCGCCGCAGTTTGATGTGTACGGCAATGACTTCAGTTGGGGAAGGCCAGTTGGGGTGAGAACTGGTGCTGGGAACAAGTCACATGGGAAAATTTCAGTGTTTGCTGGAGATGAAGAGGGTAGGTTGAACTATAAGTATTTGAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

278

Amino Acids

31.22

Weight (kDa)

9.36

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 268 1e-37 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 122, 440
AciI CCGC 1 cut(s) 692
AclWI GGATC 2 cut(s) 183, 441
AcsI RAATTY 4 cut(s) 60, 144, 246, 777
AcuI CTGAAG 1 cut(s) 703
AfaI GTAC 3 cut(s) 228, 627, 707
AgeI ACCGGT 2 cut(s) 426, 662
AgsI TTSAA 3 cut(s) 457, 497, 814
AhdI GACNNNNNGTC 1 cut(s) 415
AjuI GAANNNNNNNTTGG 2 cut(s) 16, 48
AluBI AGCT 6 cut(s) 92, 356, 581, 609, 671, 831
AluI AGCT 6 cut(s) 92, 356, 581, 609, 671, 831
Alw26I GTCTC 1 cut(s) 296
AlwI GGATC 2 cut(s) 183, 441
AoxI GGCC 1 cut(s) 731
ApoI RAATTY 4 cut(s) 60, 144, 246, 777
AsiGI ACCGGT 2 cut(s) 426, 662
AspLEI GCGC 1 cut(s) 493
AspS9I GGNCC 1 cut(s) 369
AsuC2I CCSGG 2 cut(s) 218, 502
AsuHPI GGTGA 2 cut(s) 395, 754
AsuII TTCGAA 1 cut(s) 142
AvaII GGWCC 1 cut(s) 369
BanI GGYRCC 2 cut(s) 122, 440
BauI CACGAG 2 cut(s) 66, 679
BbsI GAAGAC 2 cut(s) 175, 392
BccI CCATC 2 cut(s) 380, 568
BceAI ACGGC 1 cut(s) 724
BcnI CCSGG 2 cut(s) 218, 502
BcoDI GTCTC 1 cut(s) 296
BfaI CTAG 3 cut(s) 353, 420, 533
BisI GCNGC 1 cut(s) 692
BlsI GCNGC 1 cut(s) 693
Bme1390I CCNGG 2 cut(s) 218, 502
Bme18I GGWCC 1 cut(s) 369
BmeRI GACNNNNNGTC 1 cut(s) 415
BmgT120I GGNCC 1 cut(s) 369
BmiI GGNNCC 2 cut(s) 124, 442
BmrFI CCNGG 2 cut(s) 218, 502
BpiI GAAGAC 2 cut(s) 175, 392
BpmI CTGGAG 1 cut(s) 813
Bpu14I TTCGAA 1 cut(s) 142
BpuEI CTTGAG 2 cut(s) 122, 244
BpuMI CCSGG 2 cut(s) 218, 502
BsaAI YACGTR 1 cut(s) 380
BsaBI GATNNNNATC 1 cut(s) 212
BsaWI WCCGGW 2 cut(s) 426, 662
Bse118I RCCGGY 2 cut(s) 426, 662
Bse1I ACTGG 3 cut(s) 550, 734, 754
Bse3DI GCAATG 3 cut(s) 464, 493, 718
Bse8I GATNNNNATC 1 cut(s) 212
BseGI GGATG 1 cut(s) 213
BseJI GATNNNNATC 1 cut(s) 212
BseMI GCAATG 3 cut(s) 464, 493, 718
BseMII CTCAG 1 cut(s) 291
BseNI ACTGG 3 cut(s) 550, 734, 754
BseRI GAGGAG 2 cut(s) 325, 619
BseYI CCCAGC 1 cut(s) 755
BshFI GGCC 1 cut(s) 733
BshNI GGYRCC 2 cut(s) 122, 440
BshTI ACCGGT 2 cut(s) 426, 662
BsiSI CCGG 5 cut(s) 218, 427, 501, 635, 663
BslFI GGGAC 2 cut(s) 517, 556
BsmAI GTCTC 1 cut(s) 296
BsmFI GGGAC 2 cut(s) 517, 556
BsnI GGCC 1 cut(s) 733
Bsp119I TTCGAA 1 cut(s) 142
Bsp143I GATC 3 cut(s) 175, 207, 446
BspACI CCGC 1 cut(s) 692
BspANI GGCC 1 cut(s) 733
BspCNI CTCAG 1 cut(s) 292
BspLI GGNNCC 2 cut(s) 124, 442
BspPI GGATC 2 cut(s) 183, 441
BspT104I TTCGAA 1 cut(s) 142
BspT107I GGYRCC 2 cut(s) 122, 440
BsrDI GCAATG 3 cut(s) 464, 493, 718
BsrFI RCCGGY 2 cut(s) 426, 662
BsrI ACTGG 3 cut(s) 550, 734, 754
BssAI RCCGGY 2 cut(s) 426, 662
BssMI GATC 3 cut(s) 175, 207, 446
BssSI CACGAG 2 cut(s) 66, 679
Bst2BI CACGAG 2 cut(s) 66, 679
Bst4CI ACNGT 4 cut(s) 13, 477, 508, 649
Bst6I CTCTTC 2 cut(s) 588, 795
BstBAI YACGTR 1 cut(s) 380
BstBI TTCGAA 1 cut(s) 142
BstC8I GCNNGC 1 cut(s) 523
BstDEI CTNAG 1 cut(s) 300
BstF5I GGATG 1 cut(s) 213
BstHHI GCGC 1 cut(s) 493
BstKTI GATC 3 cut(s) 178, 210, 449
BstMAI GTCTC 1 cut(s) 296
BstMBI GATC 3 cut(s) 175, 207, 446
BstMWI GCNNNNNNNGC 3 cut(s) 129, 353, 497
BstSCI CCNGG 2 cut(s) 216, 500
BstSNI TACGTA 1 cut(s) 380
BstV2I GAAGAC 2 cut(s) 175, 392
BstX2I RGATCY 1 cut(s) 446
BstYI RGATCY 1 cut(s) 446
BsuRI GGCC 1 cut(s) 733
BtgZI GCGATG 1 cut(s) 540
BtsCI GGATG 1 cut(s) 213
BtsIMutI CAGTG 4 cut(s) 9, 513, 654, 789
Cac8I GCNNGC 1 cut(s) 523
CfoI GCGC 1 cut(s) 493
Cfr10I RCCGGY 2 cut(s) 426, 662
Cfr13I GGNCC 1 cut(s) 369
Csp6I GTAC 3 cut(s) 227, 626, 706
CspAI ACCGGT 2 cut(s) 426, 662
CviAII CATG 2 cut(s) 395, 770
CviQI GTAC 3 cut(s) 227, 626, 706
DdeI CTNAG 1 cut(s) 300
DpnI GATC 3 cut(s) 177, 209, 448
DpnII GATC 3 cut(s) 175, 207, 446
DriI GACNNNNNGTC 1 cut(s) 415
Eam1104I CTCTTC 2 cut(s) 588, 795
Eam1105I GACNNNNNGTC 1 cut(s) 415
EarI CTCTTC 2 cut(s) 588, 795
Eco105I TACGTA 1 cut(s) 380
Eco47I GGWCC 1 cut(s) 369
Eco57I CTGAAG 1 cut(s) 703
EcoRI GAATTC 1 cut(s) 144
FaeI CATG 2 cut(s) 398, 773
FaiI YATR 9 cut(s) 120, 152, 377, 396, 437, 588, 644, 771, 819
FalI AAGNNNNNCTT 2 cut(s) 81, 113
FaqI GGGAC 2 cut(s) 517, 556
FatI CATG 2 cut(s) 394, 769
Fnu4HI GCNGC 1 cut(s) 692
FokI GGATG 1 cut(s) 200
Fsp4HI GCNGC 1 cut(s) 692
FspBI CTAG 3 cut(s) 353, 420, 533
GlaI GCGC 1 cut(s) 492
GluI GCNGC 1 cut(s) 692
GsaI CCCAGC 1 cut(s) 759
GsuI CTGGAG 1 cut(s) 813
HaeIII GGCC 1 cut(s) 733
HapII CCGG 5 cut(s) 218, 427, 501, 635, 663
HhaI GCGC 1 cut(s) 493
Hin1II CATG 2 cut(s) 398, 773
Hin6I GCGC 1 cut(s) 491
HinP1I GCGC 1 cut(s) 491
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 669
HinfI GANTC 2 cut(s) 77, 416
HpaII CCGG 5 cut(s) 218, 427, 501, 635, 663
HphI GGTGA 2 cut(s) 395, 754
Hpy166II GTNNAC 3 cut(s) 19, 652, 706
Hpy188I TCNGA 2 cut(s) 58, 76
Hpy188III TCNNGA 5 cut(s) 101, 173, 450, 533, 679
Hpy8I GTNNAC 3 cut(s) 19, 652, 706
HpyAV CCTTC 1 cut(s) 723
HpyCH4III ACNGT 4 cut(s) 13, 477, 508, 649
HpyCH4IV ACGT 2 cut(s) 379, 538
HpyCH4V TGCA 1 cut(s) 586
HpyF10VI GCNNNNNNNGC 3 cut(s) 129, 353, 497
HpyF3I CTNAG 1 cut(s) 300
HpySE526I ACGT 2 cut(s) 379, 538
Hsp92II CATG 2 cut(s) 398, 773
HspAI GCGC 1 cut(s) 491
Kzo9I GATC 3 cut(s) 175, 207, 446
LmnI GCTCC 1 cut(s) 606
MaeI CTAG 3 cut(s) 353, 420, 533
MaeII ACGT 2 cut(s) 379, 538
MaeIII GTNAC 4 cut(s) 422, 508, 676, 765
MalI GATC 3 cut(s) 177, 209, 448
MboI GATC 3 cut(s) 175, 207, 446
MboII GAAGA 5 cut(s) 89, 175, 392, 605, 812
MflI RGATCY 1 cut(s) 446
MluCI AATT 6 cut(s) 46, 60, 144, 246, 270, 777
MlyI GAGTC 1 cut(s) 425
MnlI CCTC 3 cut(s) 346, 597, 796
MseI TTAA 2 cut(s) 45, 431
MspI CCGG 5 cut(s) 218, 427, 501, 635, 663
MspR9I CCNGG 2 cut(s) 218, 502
MwoI GCNNNNNNNGC 3 cut(s) 129, 353, 497
NciI CCSGG 2 cut(s) 218, 502
NdeII GATC 3 cut(s) 175, 207, 446
NlaIII CATG 2 cut(s) 398, 773
NlaIV GGNNCC 2 cut(s) 124, 442
NmuCI GTSAC 3 cut(s) 508, 676, 765
NspV TTCGAA 1 cut(s) 142
PfeI GAWTC 1 cut(s) 77
PflFI GACNNNGTC 1 cut(s) 396
PinAI ACCGGT 2 cut(s) 426, 662
PkrI GCNGC 1 cut(s) 693
PleI GAGTC 1 cut(s) 424
PpsI GAGTC 1 cut(s) 424
Ppu21I YACGTR 1 cut(s) 380
PspFI CCCAGC 1 cut(s) 755
PspN4I GGNNCC 2 cut(s) 124, 442
PspPI GGNCC 1 cut(s) 369
PsuI RGATCY 1 cut(s) 446
PsyI GACNNNGTC 1 cut(s) 396
RsaI GTAC 3 cut(s) 228, 627, 707
RsaNI GTAC 3 cut(s) 227, 626, 706
SaqAI TTAA 2 cut(s) 45, 431
SatI GCNGC 1 cut(s) 692
Sau3AI GATC 3 cut(s) 175, 207, 446
Sau96I GGNCC 1 cut(s) 369
SchI GAGTC 1 cut(s) 425
ScrFI CCNGG 2 cut(s) 218, 502
SetI ASST 9 cut(s) 94, 358, 382, 541, 583, 611, 673, 812, 833
SfuI TTCGAA 1 cut(s) 142
SinI GGWCC 1 cut(s) 369
SmlI CTYRAG 2 cut(s) 101, 259
SmoI CTYRAG 2 cut(s) 101, 259
SnaBI TACGTA 1 cut(s) 380
Sse9I AATT 6 cut(s) 46, 60, 144, 246, 270, 777
SsiI CCGC 1 cut(s) 692
SspMI CTAG 3 cut(s) 353, 420, 533
StyD4I CCNGG 2 cut(s) 216, 500
TaaI ACNGT 4 cut(s) 13, 477, 508, 649
TaiI ACGT 2 cut(s) 382, 541
TaqI TCGA 3 cut(s) 86, 142, 186
TasI AATT 6 cut(s) 46, 60, 144, 246, 270, 777
TauI GCSGC 1 cut(s) 694
TfiI GAWTC 1 cut(s) 77
Tru1I TTAA 2 cut(s) 45, 431
Tru9I TTAA 2 cut(s) 45, 431
TscAI CASTG 4 cut(s) 16, 513, 654, 789
TseFI GTSAC 3 cut(s) 508, 676, 765
Tsp45I GTSAC 3 cut(s) 508, 676, 765
TspDTI ATGAA 4 cut(s) 17, 18, 581, 813
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 4 cut(s) 16, 513, 654, 789
Tth111I GACNNNGTC 1 cut(s) 396
VpaK11BI GGWCC 1 cut(s) 369
XapI RAATTY 4 cut(s) 60, 144, 246, 777
XbaI TCTAGA 1 cut(s) 532
XspI CTAG 3 cut(s) 353, 420, 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.