Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000375

Physical Location & Seq

Genomic Coordinates Reverse (-)

17667445 .. 17669192

Gene Structure 1748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG188500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGCGCCTTCTATACATTAAAATCATATTAATTAACCTCATAATCTCCACCACCAAAGGCGCCTTCAACTTTGAAACCAGTGTAATCCAGATAGGGGAAACCATGACTCGGATTCGGCATATCTCCACTAGTACTGTCCAACCAACGAGTCACAATGGTCAGTTAGCTCCTAGAATCGAGTTGACTCCATGGGATCTTCGAATTATCAAACTTGACTACATCCAAAAGGGGCTTCTCTTCCACAAATATTATTCATCAGAGAATGAAATGAACCAGATCAGCTTGGTCCAACACCTAATATCCTCACTTTCTCAAGCTTTGGACATCTTCTACCCACTTGCCGGCCGCCTTGCAGTGACCGAAAATAAAGATAATAGTACCTCGTGTGTTTTCATCAATTGTAATGACGCCGGAGTCGAATTCTTACACGCAGCTGCTGATTGTGTCACAGTGGCCGATATCCTAGATTCCGTGGACGTTCCTGATGACATTGTCTGCCAACTCCTTCCCATGAATGGTGTTCGGAACTATGAAGGCATTTCGAAACCATTGCTTGCAGTGCAAGTAACTGAGCTTGTTGATGGCATCTTCATCGGTTGCAGCATTAACCACTCAGTTGTGGATGGTACCTCTTACTGGCATTTCCTTAATACTTGGTCTGAAATCTCTCGTTCTGGCTCTGTTCATCAGATGACCCCTCCTATTTTTCATCGTCAATTTCTTGATGGCGTTATTGAACTCCCAATTCACCTACCCTTACCTTACAATGAATTACTCCCAAGTCAGCAGCAGATTATGGATCAATCCTCTTCAGTCTCTTTACGAACAAGGGTTTTTCATTTTCCAAAAGAAAAGGTTGCACAGCTCAAAGCAAAGGCCAATGCTGAGAGGGGTACCAATAACATCTCCTCCCTTCAAGCACTCATGGCCCATTTCTGGTGCGCCACAATACGTAGCAGACATGATTTAAACCCTGATGATGAGGTTAGTTATTTCATTGCGACAGGATTGAGACAAAGATTGAAGCCACCATTGCCAAAAGAATACTTTGGGAATGCGCTTGAAGGGATTTCTGTTAAGTCCACTGCAGGTGAGCTGCTACAAAATGGGATAGGATGGGCTGCTTTGCATATAAACAAGAAGATTACCTCCATCACATCTGATGTAAGTGATGATGCAAGAAAGTATGTAGAGAATTTTGCAAAAAATCCGACGTTTTTCCCAAATCTGAGGGATATTCTACAAAGTCAAACTAGTACTACTGCGTTGCTCACAGGAAGCTCACCGCGGTTCAATGTTTATGGCAATGATTTTGGGTGGGGGAGGCCGCTCTGCTTGCGTGGTGGAGCTGCAGAAAAAAAGAATGGGATGTTAATGGTGTATCCTGGGGACAAAGAAGGAAGTATTGAATTTTTTGCTTGCCTCTTGCCTGAGACTCTACAAGCTATGGCAGGTGACGCAAAGTTCATGGAAGCTGTGCTCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009696 GO:0009697 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010817 GO:0016053 GO:0016999 GO:0017000 GO:0017144 GO:0018958 GO:0019438 GO:0019752 GO:0031347 GO:0032101 GO:0032787 GO:0042221 GO:0042445 GO:0042446 GO:0042537 GO:0043207 GO:0043436 GO:0043900 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0046189 GO:0046394 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080134 GO:1900150 GO:1900424 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

495

Amino Acids

55.14

Weight (kDa)

6.28

Isoelectric Point (pI)

35.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	38 - 488	9.4e-82	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca	FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica	MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica	Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis	pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis	RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata	RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora	Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii	Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa	Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha	Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana	Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1079, 1442
AasI	GACNNNNNNGTC	1 cut(s)	413
Acc36I	ACCTGC	2 cut(s)	1079, 1442
Acc65I	GGTACC	2 cut(s)	626, 893
AccB1I	GGYRCC	3 cut(s)	59, 626, 893
AccBSI	CCGCTC	1 cut(s)	1330
AccII	CGCG	1 cut(s)	1288
AciI	CCGC	4 cut(s)	346, 1286, 1288, 1328
AclWI	GGATC	2 cut(s)	201, 807
AcoI	YGGCCR	2 cut(s)	343, 453
AcsI	RAATTY	3 cut(s)	419, 1195, 1409
AcuI	CTGAAG	1 cut(s)	795
AcyI	GRCGYC	2 cut(s)	60, 408
AfaI	GTAC	5 cut(s)	133, 379, 628, 895, 1258
AfiI	CCNNNNNNNGG	6 cut(s)	94, 108, 341, 515, 636, 936
AgsI	TTSAA	8 cut(s)	67, 74, 737, 917, 1024, 1064, 1294, 1409
AhlI	ACTAGT	2 cut(s)	128, 1253
AjnI	CCWGG	1 cut(s)	1384
AjuI	GAANNNNNNNTTGG	4 cut(s)	47, 79, 216, 248
Alw21I	GWGCWC	1 cut(s)	1482
Alw26I	GTCTC	3 cut(s)	820, 1006, 1427
AlwI	GGATC	2 cut(s)	201, 807
AlwNI	CAGNNNCTG	1 cut(s)	437
AoxI	GGCC	5 cut(s)	343, 453, 876, 927, 1325
ApeKI	GCWGC	7 cut(s)	431, 434, 600, 787, 1096, 1121, 1349
ApoI	RAATTY	3 cut(s)	419, 1195, 1409
AseI	ATTAAT	1 cut(s)	29
Asp718I	GGTACC	2 cut(s)	626, 893
AspLEI	GCGC	4 cut(s)	6, 62, 944, 1060
AspS9I	GGNCC	2 cut(s)	286, 928
AsuHPI	GGTGA	4 cut(s)	740, 1103, 1275, 1466
AsuII	TTCGAA	2 cut(s)	199, 542
AvaII	GGWCC	1 cut(s)	286
BanI	GGYRCC	3 cut(s)	59, 626, 893
BauI	CACGAG	1 cut(s)	382
Bbv12I	GWGCWC	1 cut(s)	1482
BbvI	GCAGC	7 cut(s)	421, 443, 612, 799, 1083, 1108, 1336
BccI	CCATC	5 cut(s)	575, 617, 719, 1110, 1160
BcgI	CGANNNNNNTGC	4 cut(s)	532, 566, 574, 608
BciT130I	CCWGG	1 cut(s)	1386
BciVI	GTATCC	1 cut(s)	1392
BcoDI	GTCTC	3 cut(s)	820, 1006, 1427
BcuI	ACTAGT	2 cut(s)	128, 1253
BfaI	CTAG	4 cut(s)	129, 171, 464, 1254
BfmI	CTRYAG	2 cut(s)	1086, 1350
BfoI	RGCGCY	1 cut(s)	63
BfuAI	ACCTGC	2 cut(s)	1079, 1442
BfuI	GTATCC	1 cut(s)	1392
BisI	GCNGC	9 cut(s)	346, 432, 435, 601, 788, 1097, 1122, 1328, 1350
BlsI	GCNGC	9 cut(s)	347, 433, 436, 602, 789, 1098, 1123, 1329, 1351
BmcAI	AGTACT	2 cut(s)	133, 1258
Bme1390I	CCNGG	1 cut(s)	1386
Bme18I	GGWCC	1 cut(s)	286
BmgT120I	GGNCC	2 cut(s)	286, 928
BmiI	GGNNCC	3 cut(s)	61, 628, 895
BmrFI	CCNGG	1 cut(s)	1386
BmsI	GCATC	2 cut(s)	594, 1165
Bpu14I	TTCGAA	2 cut(s)	199, 542
BpuEI	CTTGAG	1 cut(s)	297
BsaAI	YACGTR	1 cut(s)	953
BsaHI	GRCGYC	2 cut(s)	60, 408
BsaJI	CCNNGG	4 cut(s)	188, 471, 1286, 1385
BsaXI	ACNNNNNCTCC	2 cut(s)	893, 923
Bsc4I	CCNNNNNNNGG	6 cut(s)	94, 108, 341, 515, 636, 936
Bse118I	RCCGGY	1 cut(s)	341
Bse1I	ACTGG	2 cut(s)	78, 641
Bse3DI	GCAATG	4 cut(s)	548, 996, 1031, 1312
BseBI	CCWGG	1 cut(s)	1386
BseDI	CCNNGG	4 cut(s)	188, 471, 1286, 1385
BseGI	GGATG	4 cut(s)	219, 628, 1121, 1374
BseLI	CCNNNNNNNGG	6 cut(s)	94, 108, 341, 515, 636, 936
BseMI	GCAATG	4 cut(s)	548, 996, 1031, 1312
BseMII	CTCAG	5 cut(s)	561, 627, 876, 1220, 1422
BseNI	ACTGG	2 cut(s)	78, 641
BseRI	GAGGAG	1 cut(s)	898
BseX3I	CGGCCG	1 cut(s)	343
BseXI	GCAGC	7 cut(s)	421, 443, 612, 799, 1083, 1108, 1336
Bsh1236I	CGCG	1 cut(s)	1288
Bsh1285I	CGRYCG	1 cut(s)	346
BshFI	GGCC	5 cut(s)	345, 455, 878, 929, 1327
BshNI	GGYRCC	3 cut(s)	59, 626, 893
BsiEI	CGRYCG	1 cut(s)	346
BsiHKAI	GWGCWC	1 cut(s)	1482
BsiSI	CCGG	2 cut(s)	342, 411
BslFI	GGGAC	1 cut(s)	1403
BslI	CCNNNNNNNGG	6 cut(s)	94, 108, 341, 515, 636, 936
BsmAI	GTCTC	3 cut(s)	820, 1006, 1427
BsmFI	GGGAC	1 cut(s)	1403
BsmI	GAATGC	1 cut(s)	1060
BsnI	GGCC	5 cut(s)	345, 455, 878, 929, 1327
Bsp119I	TTCGAA	2 cut(s)	199, 542
Bsp1286I	GDGCHC	1 cut(s)	1482
Bsp143I	GATC	3 cut(s)	193, 276, 799
Bsp19I	CCATGG	1 cut(s)	188
BspACI	CCGC	4 cut(s)	346, 1286, 1288, 1328
BspANI	GGCC	5 cut(s)	345, 455, 878, 929, 1327
BspCNI	CTCAG	5 cut(s)	562, 626, 877, 1221, 1423
BspFNI	CGCG	1 cut(s)	1288
BspLI	GGNNCC	3 cut(s)	61, 628, 895
BspMAI	CTGCAG	2 cut(s)	1090, 1354
BspMI	ACCTGC	2 cut(s)	1079, 1442
BspPI	GGATC	2 cut(s)	201, 807
BspT104I	TTCGAA	2 cut(s)	199, 542
BspT107I	GGYRCC	3 cut(s)	59, 626, 893
BsrBI	CCGCTC	1 cut(s)	1330
BsrDI	GCAATG	4 cut(s)	548, 996, 1031, 1312
BsrFI	RCCGGY	1 cut(s)	341
BsrI	ACTGG	2 cut(s)	78, 641
BssAI	RCCGGY	1 cut(s)	341
BssECI	CCNNGG	4 cut(s)	188, 471, 1286, 1385
BssMI	GATC	3 cut(s)	193, 276, 799
BssNI	GRCGYC	2 cut(s)	60, 408
BssSI	CACGAG	1 cut(s)	382
BssT1I	CCWWGG	1 cut(s)	188
Bst2BI	CACGAG	1 cut(s)	382
Bst2UI	CCWGG	1 cut(s)	1386
Bst4CI	ACNGT	2 cut(s)	136, 451
Bst6I	CTCTTC	2 cut(s)	242, 814
BstACI	GRCGYC	2 cut(s)	60, 408
BstBAI	YACGTR	1 cut(s)	953
BstBI	TTCGAA	2 cut(s)	199, 542
BstC8I	GCNNGC	4 cut(s)	343, 555, 1337, 1420
BstDEI	CTNAG	6 cut(s)	570, 613, 885, 1229, 1431, 1481
BstDSI	CCRYGG	3 cut(s)	188, 471, 1286
BstF5I	GGATG	4 cut(s)	219, 628, 1121, 1374
BstFNI	CGCG	1 cut(s)	1288
BstH2I	RGCGCY	1 cut(s)	63
BstHHI	GCGC	4 cut(s)	6, 62, 944, 1060
BstKTI	GATC	3 cut(s)	196, 279, 802
BstMAI	GTCTC	3 cut(s)	820, 1006, 1427
BstMBI	GATC	3 cut(s)	193, 276, 799
BstMCI	CGRYCG	1 cut(s)	346
BstMWI	GCNNNNNNNGC	5 cut(s)	559, 926, 1033, 1336, 1457
BstNI	CCWGG	1 cut(s)	1386
BstSCI	CCNGG	1 cut(s)	1384
BstSFI	CTRYAG	2 cut(s)	1086, 1350
BstSNI	TACGTA	1 cut(s)	953
BstUI	CGCG	1 cut(s)	1288
BstV1I	GCAGC	7 cut(s)	421, 443, 612, 799, 1083, 1108, 1336
BstX2I	RGATCY	1 cut(s)	193
BstYI	RGATCY	1 cut(s)	193
BstZI	CGGCCG	1 cut(s)	343
BsuI	GTATCC	1 cut(s)	1392
BsuRI	GGCC	5 cut(s)	345, 455, 878, 929, 1327
BtgI	CCRYGG	3 cut(s)	188, 471, 1286
BtsCI	GGATG	4 cut(s)	219, 628, 1121, 1374
BtsI	GCAGTG	3 cut(s)	360, 564, 1083
BtsIMutI	CAGTG	5 cut(s)	85, 360, 456, 564, 1083
BveI	ACCTGC	2 cut(s)	1079, 1442
Cac8I	GCNNGC	4 cut(s)	343, 555, 1337, 1420
CaiI	CAGNNNCTG	1 cut(s)	437
CfoI	GCGC	4 cut(s)	6, 62, 944, 1060
Cfr10I	RCCGGY	1 cut(s)	341
Cfr13I	GGNCC	2 cut(s)	286, 928
Cfr42I	CCGCGG	1 cut(s)	1289
CseI	GACGC	2 cut(s)	416, 1466
Csp6I	GTAC	5 cut(s)	132, 378, 627, 894, 1257
CviAII	CATG	6 cut(s)	103, 189, 511, 925, 962, 1468
CviQI	GTAC	5 cut(s)	132, 378, 627, 894, 1257
DdeI	CTNAG	6 cut(s)	570, 613, 885, 1229, 1431, 1481
DinI	GGCGCC	1 cut(s)	61
DpnI	GATC	3 cut(s)	195, 278, 801
DpnII	GATC	3 cut(s)	193, 276, 799
DraI	TTTAAA	1 cut(s)	969
DrdI	GACNNNNNNGTC	1 cut(s)	413
DseDI	GACNNNNNNGTC	1 cut(s)	413
EaeI	YGGCCR	2 cut(s)	343, 453
EagI	CGGCCG	1 cut(s)	343
Eam1104I	CTCTTC	2 cut(s)	242, 814
EarI	CTCTTC	2 cut(s)	242, 814
EclXI	CGGCCG	1 cut(s)	343
Eco105I	TACGTA	1 cut(s)	953
Eco130I	CCWWGG	1 cut(s)	188
Eco32I	GATATC	1 cut(s)	460
Eco47I	GGWCC	1 cut(s)	286
Eco52I	CGGCCG	1 cut(s)	343
Eco57I	CTGAAG	1 cut(s)	795
EcoRI	GAATTC	1 cut(s)	419
EcoRII	CCWGG	1 cut(s)	1384
EcoRV	GATATC	1 cut(s)	460
EcoT14I	CCWWGG	1 cut(s)	188
EgeI	GGCGCC	1 cut(s)	61
EheI	GGCGCC	1 cut(s)	61
ErhI	CCWWGG	1 cut(s)	188
FaeI	CATG	6 cut(s)	106, 192, 514, 928, 965, 1471
FaqI	GGGAC	1 cut(s)	1403
FatI	CATG	6 cut(s)	102, 188, 510, 924, 961, 1467
Fnu4HI	GCNGC	9 cut(s)	346, 432, 435, 601, 788, 1097, 1122, 1328, 1350
FokI	GGATG	4 cut(s)	206, 635, 1128, 1381
Fsp4HI	GCNGC	9 cut(s)	346, 432, 435, 601, 788, 1097, 1122, 1328, 1350
FspBI	CTAG	4 cut(s)	129, 171, 464, 1254
GlaI	GCGC	4 cut(s)	5, 61, 943, 1059
GluI	GCNGC	9 cut(s)	346, 432, 435, 601, 788, 1097, 1122, 1328, 1350
HaeII	RGCGCY	1 cut(s)	63
HaeIII	GGCC	5 cut(s)	345, 455, 878, 929, 1327
HapII	CCGG	2 cut(s)	342, 411
HgaI	GACGC	2 cut(s)	416, 1466
HhaI	GCGC	4 cut(s)	6, 62, 944, 1060
Hin1I	GRCGYC	2 cut(s)	60, 408
Hin1II	CATG	6 cut(s)	106, 192, 514, 928, 965, 1471
Hin6I	GCGC	4 cut(s)	4, 60, 942, 1058
HinP1I	GCGC	4 cut(s)	4, 60, 942, 1058
HincII	GTYRAC	1 cut(s)	183
HindII	GTYRAC	1 cut(s)	183
HindIII	AAGCTT	1 cut(s)	315
HinfI	GANTC	8 cut(s)	106, 112, 148, 174, 184, 414, 467, 1435
HpaII	CCGG	2 cut(s)	342, 411
HphI	GGTGA	4 cut(s)	740, 1103, 1275, 1466
Hpy166II	GTNNAC	3 cut(s)	183, 475, 1083
Hpy188I	TCNGA	9 cut(s)	111, 259, 525, 661, 690, 1162, 1212, 1230, 1484
Hpy188III	TCNNGA	3 cut(s)	88, 482, 722
Hpy8I	GTNNAC	3 cut(s)	183, 475, 1083
Hpy99I	CGWCG	1 cut(s)	1216
HpyAV	CCTTC	7 cut(s)	17, 73, 515, 527, 923, 1058, 1391
HpyCH4III	ACNGT	2 cut(s)	136, 451
HpyCH4IV	ACGT	3 cut(s)	477, 952, 1214
HpyF10VI	GCNNNNNNNGC	5 cut(s)	559, 926, 1033, 1336, 1457
HpyF3I	CTNAG	6 cut(s)	570, 613, 885, 1229, 1431, 1481
HpySE526I	ACGT	3 cut(s)	477, 952, 1214
Hsp92I	GRCGYC	2 cut(s)	60, 408
Hsp92II	CATG	6 cut(s)	106, 192, 514, 928, 965, 1471
HspAI	GCGC	4 cut(s)	4, 60, 942, 1058
KasI	GGCGCC	1 cut(s)	59
KpnI	GGTACC	2 cut(s)	630, 897
KroI	GCCGGC	1 cut(s)	341
KroNI	GCCGGC	1 cut(s)	343
KspI	CCGCGG	1 cut(s)	1289
Kzo9I	GATC	3 cut(s)	193, 276, 799
LmnI	GCTCC	2 cut(s)	172, 1346
Lsp1109I	GCAGC	7 cut(s)	421, 443, 612, 799, 1083, 1108, 1336
LweI	GCATC	2 cut(s)	594, 1165
MaeI	CTAG	4 cut(s)	129, 171, 464, 1254
MaeII	ACGT	3 cut(s)	477, 952, 1214
MaeIII	GTNAC	5 cut(s)	149, 355, 445, 565, 1454
MalI	GATC	3 cut(s)	195, 278, 801
MbiI	CCGCTC	1 cut(s)	1330
MboI	GATC	3 cut(s)	193, 276, 799
MboII	GAAGA	6 cut(s)	188, 229, 319, 580, 801, 1153
MfeI	CAATTG	1 cut(s)	397
MflI	RGATCY	1 cut(s)	193
MhlI	GDGCHC	1 cut(s)	1482
MluCI	AATT	9 cut(s)	30, 201, 397, 419, 716, 744, 770, 1195, 1409
Mly113I	GGCGCC	1 cut(s)	60
MlyI	GAGTC	5 cut(s)	100, 157, 178, 423, 1429
MmeI	TCCRAC	3 cut(s)	163, 313, 1235
MroNI	GCCGGC	1 cut(s)	341
MseI	TTAA	8 cut(s)	18, 29, 33, 606, 648, 968, 1077, 1373
MspA1I	CMGCKG	2 cut(s)	434, 1288
MspI	CCGG	2 cut(s)	342, 411
MspR9I	CCNGG	1 cut(s)	1386
MunI	CAATTG	1 cut(s)	397
Mva1269I	GAATGC	1 cut(s)	1060
MvaI	CCWGG	1 cut(s)	1386
MvnI	CGCG	1 cut(s)	1288
MwoI	GCNNNNNNNGC	5 cut(s)	559, 926, 1033, 1336, 1457
NaeI	GCCGGC	1 cut(s)	343
NarI	GGCGCC	1 cut(s)	60
NcoI	CCATGG	1 cut(s)	188
NdeII	GATC	3 cut(s)	193, 276, 799
NgoMIV	GCCGGC	1 cut(s)	341
NlaIII	CATG	6 cut(s)	106, 192, 514, 928, 965, 1471
NlaIV	GGNNCC	3 cut(s)	61, 628, 895
NmuCI	GTSAC	4 cut(s)	149, 355, 445, 1454
NspV	TTCGAA	2 cut(s)	199, 542
PacI	TTAATTAA	1 cut(s)	33
PaqCI	CACCTGC	2 cut(s)	1079, 1442
PcsI	WCGNNNNNNNCGW	1 cut(s)	414
PctI	GAATGC	1 cut(s)	1060
PdiI	GCCGGC	1 cut(s)	343
PfeI	GAWTC	3 cut(s)	112, 174, 467
PflFI	GACNNNGTC	1 cut(s)	491
PkrI	GCNGC	9 cut(s)	347, 433, 436, 602, 789, 1098, 1123, 1329, 1351
PleI	GAGTC	5 cut(s)	100, 156, 178, 422, 1429
PluTI	GGCGCC	1 cut(s)	63
PpsI	GAGTC	5 cut(s)	100, 156, 178, 422, 1429
Ppu21I	YACGTR	1 cut(s)	953
PshBI	ATTAAT	1 cut(s)	29
Psp6I	CCWGG	1 cut(s)	1384
PspGI	CCWGG	1 cut(s)	1384
PspN4I	GGNNCC	3 cut(s)	61, 628, 895
PspPI	GGNCC	2 cut(s)	286, 928
PstI	CTGCAG	2 cut(s)	1090, 1354
PstNI	CAGNNNCTG	1 cut(s)	437
PsuI	RGATCY	1 cut(s)	193
PsyI	GACNNNGTC	1 cut(s)	491
PvuII	CAGCTG	1 cut(s)	434
RsaI	GTAC	5 cut(s)	133, 379, 628, 895, 1258
RsaNI	GTAC	5 cut(s)	132, 378, 627, 894, 1257
SacII	CCGCGG	1 cut(s)	1289
SaqAI	TTAA	8 cut(s)	18, 29, 33, 606, 648, 968, 1077, 1373
SatI	GCNGC	9 cut(s)	346, 432, 435, 601, 788, 1097, 1122, 1328, 1350
Sau3AI	GATC	3 cut(s)	193, 276, 799
Sau96I	GGNCC	2 cut(s)	286, 928
ScaI	AGTACT	2 cut(s)	133, 1258
SchI	GAGTC	5 cut(s)	100, 157, 178, 423, 1429
ScrFI	CCNGG	1 cut(s)	1386
SduI	GDGCHC	1 cut(s)	1482
SfaNI	GCATC	2 cut(s)	594, 1165
SfcI	CTRYAG	2 cut(s)	1086, 1350
SfoI	GGCGCC	1 cut(s)	61
Sfr303I	CCGCGG	1 cut(s)	1289
SfuI	TTCGAA	2 cut(s)	199, 542
SgrBI	CCGCGG	1 cut(s)	1289
SinI	GGWCC	1 cut(s)	286
SmlI	CTYRAG	1 cut(s)	312
SmoI	CTYRAG	1 cut(s)	312
SnaBI	TACGTA	1 cut(s)	953
SpeI	ACTAGT	2 cut(s)	128, 1253
Sse9I	AATT	9 cut(s)	30, 201, 397, 419, 716, 744, 770, 1195, 1409
SsiI	CCGC	4 cut(s)	346, 1286, 1288, 1328
SspDI	GGCGCC	1 cut(s)	59
SspI	AATATT	1 cut(s)	248
SspMI	CTAG	4 cut(s)	129, 171, 464, 1254
StyD4I	CCNGG	1 cut(s)	1384
StyI	CCWWGG	1 cut(s)	188
TaaI	ACNGT	2 cut(s)	136, 451
TaiI	ACGT	3 cut(s)	480, 955, 1217
TaqI	TCGA	4 cut(s)	177, 199, 417, 542
TaqII	GACCGA	1 cut(s)	374
TasI	AATT	9 cut(s)	30, 201, 397, 419, 716, 744, 770, 1195, 1409
TatI	WGTACW	2 cut(s)	131, 1256
TauI	GCSGC	2 cut(s)	348, 1330
TfiI	GAWTC	3 cut(s)	112, 174, 467
Tru1I	TTAA	8 cut(s)	18, 29, 33, 606, 648, 968, 1077, 1373
Tru9I	TTAA	8 cut(s)	18, 29, 33, 606, 648, 968, 1077, 1373
TscAI	CASTG	5 cut(s)	85, 360, 456, 564, 1090
TseFI	GTSAC	4 cut(s)	149, 355, 445, 1454
TseI	GCWGC	7 cut(s)	431, 434, 600, 787, 1096, 1121, 1349
Tsp45I	GTSAC	4 cut(s)	149, 355, 445, 1454
TspGWI	ACGGA	1 cut(s)	460
TspRI	CASTG	5 cut(s)	85, 360, 456, 564, 1090
Tth111I	GACNNNGTC	1 cut(s)	491
VpaK11BI	GGWCC	1 cut(s)	286
VspI	ATTAAT	1 cut(s)	29
XapI	RAATTY	3 cut(s)	419, 1195, 1409
XspI	CTAG	4 cut(s)	129, 171, 464, 1254
ZrmI	AGTACT	2 cut(s)	133, 1258

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.