Rorug02G0133200

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
11505236 .. 11506575
1340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0133200.1

Sequence Viewer

Length: 966 bp
ATGGTGAACATGAGTGAGGTAAGTCACCAAAGGATCAAAACCAATGGAATATGGATGCACATAGCAGAACAAGGGACAGGGCCTCTTGTGCTTCTTCTCCATGGCTTCCCCGAAATATGGTACTCGTGGCGCCATCAAATTGGTTACTTGGCTAAACATGGCTACCATGTGGTTGCACCAGATATGAGAGGCTATGGTGACACTGACTCACCTCTCAGCCCTAGCTCATACTCTCTTCTTCACCTTGTTGGAGACCTTATTGATCTTCTTGACCATTTTGGTCAACAACAGGCATTTGTGGTGGGACATGACTATGGAGCTATTGTTGCTTGGCATCTGAGTCTGTTCCGGCCTGATAGAGTCAAGGCATTGGTTGCACTATCTGCTCCGTACTTTGAACCATCTTCAAGTATCAGGAGTATTGAATCTTTCAGGCAAGGTTTTGGTGAAGGATGTTATGTTTGTCAGTTTCAGGAACCGGGAAGGGCAGAAAGATCTTTTGCGAGATATGACTATTTGACAGTGATGAAGAAGTTCTTGCTGTATAACAAGACAGATTATCTGGTAGCTCCACCTGGGATGGAGCTTATAGATTATCTGGAGACACCAGCAAAATTGCCACCATGGATAACTGAGGAGGACCTCCAAGTCTATGCTGAAAAGTTTGAGGAATCTGGTTTCACTGGTGCTCTCAATTATTTTCGAACCCTTGAGTCGTACTGGGAGCTAATGGGACCATGGCGAGGAAAAAGGATTAGTGTTCCAGCAAAGTTCATTCTAGGTGACAAAGATATTGGTTATGATGCTCTGGGCACCGGAGAATATGTGAAAGGAGATGTTTTCAAGAGTCTGGTACCGAACCTGGAAGTCGTAATTTTAGATGGTCACCATTTTATCCAGCAAGAGAAACCTCAGGAAGTCTCCCACGAAATTCTCTCCTTCATAAGCGAATTTTCTACAGAATAG

Protein Analysis

321

Amino Acids

36.58

Weight (kDa)

5.37

Isoelectric Point (pI)

43.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 28 - 138 5.7e-29 alpha/beta hydrolase fold
Hydrolase_4 PF12146 29 - 139 5.5e-14 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 30 - 308 8.2e-21 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 647
Acc65I GGTACC 1 cut(s) 853
AccB1I GGYRCC 3 cut(s) 129, 812, 853
AclWI GGATC 1 cut(s) 41
AcsI RAATTY 2 cut(s) 930, 950
AcyI GRCGYC 1 cut(s) 130
AfaI GTAC 4 cut(s) 122, 392, 719, 855
AfiI CCNNNNNNNGG 2 cut(s) 117, 743
AgsI TTSAA 4 cut(s) 398, 408, 425, 844
AjnI CCWGG 2 cut(s) 574, 861
AluBI AGCT 5 cut(s) 225, 320, 569, 586, 727
AluI AGCT 5 cut(s) 225, 320, 569, 586, 727
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 3 cut(s) 246, 596, 925
AlwI GGATC 1 cut(s) 41
AoxI GGCC 2 cut(s) 80, 350
ApoI RAATTY 2 cut(s) 930, 950
Asp700I GAANNNNTTC 1 cut(s) 533
Asp718I GGTACC 1 cut(s) 853
AspLEI GCGC 1 cut(s) 132
AspS9I GGNCC 3 cut(s) 80, 640, 734
AsuC2I CCSGG 1 cut(s) 480
AsuHPI GGTGA 8 cut(s) 16, 17, 201, 209, 233, 458, 794, 878
AsuII TTCGAA 1 cut(s) 703
AvaII GGWCC 2 cut(s) 640, 734
AxyI CCTNAGG 1 cut(s) 912
BaeGI GKGCMC 1 cut(s) 815
BanI GGYRCC 3 cut(s) 129, 812, 853
BauI CACGAG 1 cut(s) 124
Bbv12I GWGCWC 1 cut(s) 691
BccI CCATC 4 cut(s) 141, 409, 574, 875
BciT130I CCWGG 2 cut(s) 576, 863
BcnI CCSGG 1 cut(s) 480
BcoDI GTCTC 3 cut(s) 246, 596, 925
BfaI CTAG 2 cut(s) 222, 779
BfmI CTRYAG 1 cut(s) 957
BfoI RGCGCY 1 cut(s) 133
BglII AGATCT 1 cut(s) 494
Bme1390I CCNGG 3 cut(s) 480, 576, 863
Bme18I GGWCC 2 cut(s) 640, 734
BmgT120I GGNCC 3 cut(s) 80, 640, 734
BmiI GGNNCC 5 cut(s) 131, 477, 735, 814, 855
BmrFI CCNGG 3 cut(s) 480, 576, 863
BmrI ACTGGG 1 cut(s) 730
BmsI GCATC 3 cut(s) 45, 343, 793
BmuI ACTGGG 1 cut(s) 730
BpmI CTGGAG 1 cut(s) 620
Bpu14I TTCGAA 1 cut(s) 703
BpuEI CTTGAG 1 cut(s) 731
BpuMI CCSGG 1 cut(s) 480
BsaHI GRCGYC 1 cut(s) 130
BsaI GGTCTC 1 cut(s) 246
BsaJI CCNNGG 4 cut(s) 100, 575, 623, 737
BsaWI WCCGGW 1 cut(s) 815
BsaXI ACNNNNNCTCC 4 cut(s) 309, 339, 810, 840
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 743
Bse1I ACTGG 2 cut(s) 688, 725
Bse21I CCTNAGG 1 cut(s) 912
BseBI CCWGG 2 cut(s) 576, 863
BseDI CCNNGG 4 cut(s) 100, 575, 623, 737
BseGI GGATG 3 cut(s) 60, 458, 585
BseLI CCNNNNNNNGG 2 cut(s) 117, 743
BseMII CTCAG 4 cut(s) 229, 329, 624, 926
BseNI ACTGG 2 cut(s) 688, 725
BseRI GAGGAG 1 cut(s) 650
BseSI GKGCMC 1 cut(s) 815
BshFI GGCC 2 cut(s) 82, 352
BshNI GGYRCC 3 cut(s) 129, 812, 853
BsiHKAI GWGCWC 1 cut(s) 691
BsiSI CCGG 3 cut(s) 349, 479, 816
BslFI GGGAC 3 cut(s) 88, 318, 747
BslI CCNNNNNNNGG 2 cut(s) 117, 743
BsmAI GTCTC 3 cut(s) 246, 596, 925
BsmFI GGGAC 3 cut(s) 88, 318, 747
BsnI GGCC 2 cut(s) 82, 352
Bso31I GGTCTC 1 cut(s) 246
Bsp119I TTCGAA 1 cut(s) 703
Bsp1286I GDGCHC 2 cut(s) 691, 815
Bsp143I GATC 3 cut(s) 33, 262, 494
Bsp19I CCATGG 3 cut(s) 100, 623, 737
BspANI GGCC 2 cut(s) 82, 352
BspCNI CTCAG 4 cut(s) 228, 330, 625, 925
BspLI GGNNCC 5 cut(s) 131, 477, 735, 814, 855
BspPI GGATC 1 cut(s) 41
BspT104I TTCGAA 1 cut(s) 703
BspT107I GGYRCC 3 cut(s) 129, 812, 853
BspTNI GGTCTC 1 cut(s) 246
BsrI ACTGG 2 cut(s) 688, 725
BssECI CCNNGG 4 cut(s) 100, 575, 623, 737
BssMI GATC 3 cut(s) 33, 262, 494
BssNI GRCGYC 1 cut(s) 130
BssSI CACGAG 1 cut(s) 124
BssT1I CCWWGG 3 cut(s) 100, 623, 737
Bst2BI CACGAG 1 cut(s) 124
Bst2UI CCWGG 2 cut(s) 576, 863
Bst4CI ACNGT 1 cut(s) 523
Bst6I CTCTTC 1 cut(s) 240
BstACI GRCGYC 1 cut(s) 130
BstAPI GCANNNNNTGC 2 cut(s) 374, 383
BstBI TTCGAA 1 cut(s) 703
BstDEI CTNAG 4 cut(s) 215, 338, 633, 912
BstDSI CCRYGG 3 cut(s) 100, 623, 737
BstEII GGTNACC 1 cut(s) 884
BstF5I GGATG 3 cut(s) 60, 458, 585
BstH2I RGCGCY 1 cut(s) 133
BstHHI GCGC 1 cut(s) 132
BstKTI GATC 3 cut(s) 36, 265, 497
BstMAI GTCTC 3 cut(s) 246, 596, 925
BstMBI GATC 3 cut(s) 33, 262, 494
BstMWI GCNNNNNNNGC 4 cut(s) 88, 326, 374, 383
BstNI CCWGG 2 cut(s) 576, 863
BstPI GGTNACC 1 cut(s) 884
BstSCI CCNGG 3 cut(s) 478, 574, 861
BstSFI CTRYAG 1 cut(s) 957
BstSLI GKGCMC 1 cut(s) 815
BstX2I RGATCY 1 cut(s) 494
BstXI CCANNNNNNTGG 1 cut(s) 140
BstYI RGATCY 1 cut(s) 494
Bsu36I CCTNAGG 1 cut(s) 912
BsuRI GGCC 2 cut(s) 82, 352
BtgI CCRYGG 3 cut(s) 100, 623, 737
BtsCI GGATG 3 cut(s) 60, 458, 585
BtsIMutI CAGTG 3 cut(s) 201, 528, 681
CfoI GCGC 1 cut(s) 132
Cfr13I GGNCC 3 cut(s) 80, 640, 734
Csp6I GTAC 4 cut(s) 121, 391, 718, 854
CviAII CATG 7 cut(s) 10, 101, 158, 167, 308, 624, 738
CviQI GTAC 4 cut(s) 121, 391, 718, 854
DdeI CTNAG 4 cut(s) 215, 338, 633, 912
DinI GGCGCC 1 cut(s) 131
DpnI GATC 3 cut(s) 35, 264, 496
DpnII GATC 3 cut(s) 33, 262, 494
DrdI GACNNNNNNGTC 1 cut(s) 647
DseDI GACNNNNNNGTC 1 cut(s) 647
Eam1104I CTCTTC 1 cut(s) 240
EarI CTCTTC 1 cut(s) 240
Eco130I CCWWGG 3 cut(s) 100, 623, 737
Eco31I GGTCTC 1 cut(s) 246
Eco47I GGWCC 2 cut(s) 640, 734
Eco81I CCTNAGG 1 cut(s) 912
Eco91I GGTNACC 1 cut(s) 884
EcoO109I RGGNCCY 2 cut(s) 80, 640
EcoO65I GGTNACC 1 cut(s) 884
EcoRII CCWGG 2 cut(s) 574, 861
EcoT14I CCWWGG 3 cut(s) 100, 623, 737
EgeI GGCGCC 1 cut(s) 131
EheI GGCGCC 1 cut(s) 131
ErhI CCWWGG 3 cut(s) 100, 623, 737
FaeI CATG 7 cut(s) 13, 104, 161, 170, 311, 627, 741
FalI AAGNNNNNCTT 2 cut(s) 521, 553
FaqI GGGAC 3 cut(s) 88, 318, 747
FatI CATG 7 cut(s) 9, 100, 157, 166, 307, 623, 737
FokI GGATG 3 cut(s) 67, 465, 592
FspBI CTAG 2 cut(s) 222, 779
GlaI GCGC 1 cut(s) 131
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 1 cut(s) 133
HaeIII GGCC 2 cut(s) 82, 352
HapII CCGG 3 cut(s) 349, 479, 816
HhaI GCGC 1 cut(s) 132
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 7 cut(s) 13, 104, 161, 170, 311, 627, 741
Hin6I GCGC 1 cut(s) 130
HinP1I GCGC 1 cut(s) 130
HincII GTYRAC 1 cut(s) 284
HindII GTYRAC 1 cut(s) 284
HinfI GANTC 7 cut(s) 206, 340, 360, 425, 671, 713, 847
HpaII CCGG 3 cut(s) 349, 479, 816
HphI GGTGA 8 cut(s) 16, 17, 201, 209, 233, 458, 794, 878
Hpy166II GTNNAC 2 cut(s) 7, 284
Hpy188I TCNGA 1 cut(s) 339
Hpy188III TCNNGA 6 cut(s) 269, 415, 473, 599, 844, 914
Hpy8I GTNNAC 2 cut(s) 7, 284
HpyAV CCTTC 3 cut(s) 443, 477, 949
HpyCH4III ACNGT 1 cut(s) 523
HpyCH4V TGCA 3 cut(s) 58, 176, 377
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 326, 374, 383
HpyF3I CTNAG 4 cut(s) 215, 338, 633, 912
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 7 cut(s) 13, 104, 161, 170, 311, 627, 741
HspAI GCGC 1 cut(s) 130
KasI GGCGCC 1 cut(s) 129
KpnI GGTACC 1 cut(s) 857
Kzo9I GATC 3 cut(s) 33, 262, 494
LmnI GCTCC 5 cut(s) 317, 391, 574, 583, 724
LweI GCATC 3 cut(s) 45, 343, 793
MaeI CTAG 2 cut(s) 222, 779
MaeIII GTNAC 5 cut(s) 23, 143, 197, 782, 884
MalI GATC 3 cut(s) 35, 264, 496
MboI GATC 3 cut(s) 33, 262, 494
MboII GAAGA 6 cut(s) 86, 227, 230, 257, 396, 541
MflI RGATCY 1 cut(s) 494
MhlI GDGCHC 2 cut(s) 691, 815
MluCI AATT 6 cut(s) 138, 614, 694, 873, 930, 950
Mly113I GGCGCC 1 cut(s) 130
MlyI GAGTC 5 cut(s) 200, 349, 369, 722, 856
MmeI TCCRAC 1 cut(s) 229
MroXI GAANNNNTTC 1 cut(s) 533
MslI CAYNNNNRTG 1 cut(s) 312
MspI CCGG 3 cut(s) 349, 479, 816
MspR9I CCNGG 3 cut(s) 480, 576, 863
MvaI CCWGG 2 cut(s) 576, 863
MwoI GCNNNNNNNGC 4 cut(s) 88, 326, 374, 383
NarI GGCGCC 1 cut(s) 130
NciI CCSGG 1 cut(s) 480
NcoI CCATGG 3 cut(s) 100, 623, 737
NdeII GATC 3 cut(s) 33, 262, 494
NlaIII CATG 7 cut(s) 13, 104, 161, 170, 311, 627, 741
NlaIV GGNNCC 5 cut(s) 131, 477, 735, 814, 855
NmuCI GTSAC 4 cut(s) 23, 197, 782, 884
NspV TTCGAA 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 2 cut(s) 425, 671
PleI GAGTC 5 cut(s) 200, 348, 368, 721, 855
PluTI GGCGCC 1 cut(s) 133
PpsI GAGTC 5 cut(s) 200, 348, 368, 721, 855
PpuMI RGGWCCY 1 cut(s) 640
Psp5II RGGWCCY 1 cut(s) 640
Psp6I CCWGG 2 cut(s) 574, 861
PspEI GGTNACC 1 cut(s) 884
PspGI CCWGG 2 cut(s) 574, 861
PspN4I GGNNCC 5 cut(s) 131, 477, 735, 814, 855
PspPI GGNCC 3 cut(s) 80, 640, 734
PspPPI RGGWCCY 1 cut(s) 640
PsuI RGATCY 1 cut(s) 494
RsaI GTAC 4 cut(s) 122, 392, 719, 855
RsaNI GTAC 4 cut(s) 121, 391, 718, 854
RseI CAYNNNNRTG 1 cut(s) 312
Sau3AI GATC 3 cut(s) 33, 262, 494
Sau96I GGNCC 3 cut(s) 80, 640, 734
SchI GAGTC 5 cut(s) 200, 349, 369, 722, 856
ScrFI CCNGG 3 cut(s) 480, 576, 863
SduI GDGCHC 2 cut(s) 691, 815
SfaNI GCATC 3 cut(s) 45, 343, 793
SfcI CTRYAG 1 cut(s) 957
SfoI GGCGCC 1 cut(s) 131
SfuI TTCGAA 1 cut(s) 703
SinI GGWCC 2 cut(s) 640, 734
SmiMI CAYNNNNRTG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 710
SmoI CTYRAG 1 cut(s) 710
Sse9I AATT 6 cut(s) 138, 614, 694, 873, 930, 950
SspDI GGCGCC 1 cut(s) 129
SspMI CTAG 2 cut(s) 222, 779
StyD4I CCNGG 3 cut(s) 478, 574, 861
StyI CCWWGG 3 cut(s) 100, 623, 737
TaaI ACNGT 1 cut(s) 523
TaqI TCGA 1 cut(s) 703
TasI AATT 6 cut(s) 138, 614, 694, 873, 930, 950
TfiI GAWTC 2 cut(s) 425, 671
TscAI CASTG 3 cut(s) 208, 528, 688
TseFI GTSAC 4 cut(s) 23, 197, 782, 884
Tsp45I GTSAC 4 cut(s) 23, 197, 782, 884
TspDTI ATGAA 3 cut(s) 542, 763, 931
TspGWI ACGGA 1 cut(s) 378
TspRI CASTG 3 cut(s) 208, 528, 688
VpaK11BI GGWCC 2 cut(s) 640, 734
XapI RAATTY 2 cut(s) 930, 950
XmnI GAANNNNTTC 1 cut(s) 533
XspI CTAG 2 cut(s) 222, 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.