RLG00000000207

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Unknown
Physical Location & Seq
Forward (+)
993584 .. 994653
1070 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000207

Sequence Viewer

Length: 1035 bp
ATGGGGCACATTCGCTTTATCTCTACCACTACTGTTCAACCTTCGAGCCAAAATGCCAAATTGATCAGTCTACTGGTAGAATTGAATTACATCCAAAAGGGCATTCTCTTCCACAAACCTCAATCCGATTACACAAAAGATCCCAACAAGAGCTTGATCGAGCATCTAAAAGCCTCCTTCTCCTGCTCATTGGACATCTTTTATCCCCTTGCCGGCCGTCTTGCCATAACCGAAAATGATCAAGACAGCACCACCTCGTTTTCCGTTGACTGCAACGGCATCGGAGCTGAATTTGTCCATGCAGCCGCGGATGGTGTCACGGTGGCGGATGTCCTCGACCCTATTTTGGTTCCCGACGACATTGTTTACTCATTCTTTCCGTTGAATGGTGTTTTGAACTACCAAGGCACGTCCACCCCGTTGCTTGCAGTGCAAATAACAGAGCTTGCTGATGGCATTTTCATTGGTCTTAGTATGAATCACTCAGTTGTTGACGGGAAGTCGTTCTGGAACTTCTTCAATTCTTGGTCCGAAATCTCTCGTTGTGGGGACACTTCGCAGCCACTGCCGATTTTCAGCCGTCAATTCCTTGATGGCATCATTGATCTCCCCGTTCGCATCCCTCACTTTCGGGACCAAATCCCTGCAGGAAAGAGTAGTTCATCTTTGCCACCAGTTCTCCTTCAACAAAGAGTGTTCCTTTTTTCTAAAGAAAAAATTGCCGAAATCAAAGCAAAAGCAAATTCCCAAATGGGGATCAGCAAGATCTCATCCCTTCAAGCACTCTTGGGTCATCTTTGGTTGTGCATAGCCCGAACTGAATGTCTCAGCTCCAGCACTGACCAAGAGACCAAGTACAAGGTCTTAATAGGGATGAGGCAGAGATTGAAGCCGCCATTGCCAGACCAATATCTCGGAAACGCCGTTCTATTTGGGGTAGTAAAGTCCACGGTAGGCAATCTGGTTGAGCAAGGGCTAGGGTGGGCGGCTTGGGAAATGAACAGGATGGTTGCTTCGCAGACGGAGCAAAAGTGA

Protein Analysis

345

Amino Acids

37.93

Weight (kDa)

6.17

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 25 - 341 9.7e-61 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 70
AccII CGCG 1 cut(s) 308
AciI CCGC 5 cut(s) 306, 308, 326, 893, 986
AclWI GGATC 2 cut(s) 134, 764
AcoI YGGCCR 1 cut(s) 214
AcsI RAATTY 2 cut(s) 290, 742
AfaI GTAC 1 cut(s) 857
AfiI CCNNNNNNNGG 4 cut(s) 212, 346, 386, 753
AgsI TTSAA 8 cut(s) 38, 85, 385, 397, 520, 686, 779, 889
AhdI GACNNNNNGTC 1 cut(s) 499
AjiI CACGTC 1 cut(s) 411
AjuI GAANNNNNNNTTGG 2 cut(s) 87, 119
AloI GAACNNNNNNTCC 2 cut(s) 909, 941
AluBI AGCT 4 cut(s) 153, 287, 445, 831
AluI AGCT 4 cut(s) 153, 287, 445, 831
Alw26I GTCTC 2 cut(s) 830, 842
AlwI GGATC 2 cut(s) 134, 764
AlwNI CAGNNNCTG 1 cut(s) 565
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 2 cut(s) 302, 559
ApoI RAATTY 2 cut(s) 290, 742
ArsI GACNNNNNNTTYG 2 cut(s) 808, 840
Asp700I GAANNNNTTC 2 cut(s) 503, 515
AspS9I GGNCC 2 cut(s) 528, 634
AvaII GGWCC 2 cut(s) 528, 634
BaeGI GKGCMC 1 cut(s) 9
BbvI GCAGC 2 cut(s) 314, 571
BccI CCATC 4 cut(s) 305, 446, 587, 1000
BceAI ACGGC 4 cut(s) 201, 292, 564, 908
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BclI TGATCA 2 cut(s) 63, 238
BcoDI GTCTC 2 cut(s) 830, 842
BfaI CTAG 1 cut(s) 977
BfmI CTRYAG 1 cut(s) 645
BglII AGATCT 1 cut(s) 765
BisI GCNGC 5 cut(s) 303, 306, 560, 893, 987
BlsI GCNGC 5 cut(s) 304, 307, 561, 894, 988
Bme18I GGWCC 2 cut(s) 528, 634
BmeRI GACNNNNNGTC 1 cut(s) 499
BmgBI CACGTC 1 cut(s) 411
BmgT120I GGNCC 2 cut(s) 528, 634
BmiI GGNNCC 2 cut(s) 351, 635
BmsI GCATC 4 cut(s) 172, 288, 606, 627
BpmI CTGGAG 1 cut(s) 817
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 3 cut(s) 306, 403, 948
BsaXI ACNNNNNCTCC 3 cut(s) 663, 693, 1016
Bsc4I CCNNNNNNNGG 4 cut(s) 212, 346, 386, 753
Bse118I RCCGGY 1 cut(s) 212
Bse1I ACTGG 2 cut(s) 78, 674
Bse3DI GCAATG 1 cut(s) 896
BseDI CCNNGG 3 cut(s) 306, 403, 948
BseGI GGATG 7 cut(s) 90, 316, 334, 618, 770, 879, 1011
BseLI CCNNNNNNNGG 4 cut(s) 212, 346, 386, 753
BseMI GCAATG 1 cut(s) 896
BseMII CTCAG 2 cut(s) 498, 841
BseNI ACTGG 2 cut(s) 78, 674
BseSI GKGCMC 1 cut(s) 9
BseX3I CGGCCG 1 cut(s) 214
BseXI GCAGC 2 cut(s) 314, 571
Bsh1236I CGCG 1 cut(s) 308
Bsh1285I CGRYCG 1 cut(s) 217
BshFI GGCC 1 cut(s) 216
BsiEI CGRYCG 1 cut(s) 217
BsiSI CCGG 1 cut(s) 213
BslFI GGGAC 2 cut(s) 563, 647
BslI CCNNNNNNNGG 4 cut(s) 212, 346, 386, 753
BsmAI GTCTC 2 cut(s) 830, 842
BsmFI GGGAC 2 cut(s) 563, 647
BsmI GAATGC 1 cut(s) 102
BsnI GGCC 1 cut(s) 216
Bso31I GGTCTC 1 cut(s) 842
Bsp1286I GDGCHC 1 cut(s) 9
Bsp143I GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
BspACI CCGC 5 cut(s) 306, 308, 326, 893, 986
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 2 cut(s) 497, 840
BspFNI CGCG 1 cut(s) 308
BspLI GGNNCC 2 cut(s) 351, 635
BspMAI CTGCAG 1 cut(s) 649
BspPI GGATC 2 cut(s) 134, 764
BspTNI GGTCTC 1 cut(s) 842
BsrDI GCAATG 1 cut(s) 896
BsrFI RCCGGY 1 cut(s) 212
BsrI ACTGG 2 cut(s) 78, 674
BssAI RCCGGY 1 cut(s) 212
BssECI CCNNGG 3 cut(s) 306, 403, 948
BssMI GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
BssT1I CCWWGG 1 cut(s) 403
Bst4CI ACNGT 3 cut(s) 34, 322, 952
Bst6I CTCTTC 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 565
BstC8I GCNNGC 3 cut(s) 214, 426, 447
BstDEI CTNAG 3 cut(s) 470, 484, 827
BstDSI CCRYGG 2 cut(s) 306, 948
BstF5I GGATG 7 cut(s) 90, 316, 334, 618, 770, 879, 1011
BstFNI CGCG 1 cut(s) 308
BstKTI GATC 7 cut(s) 66, 142, 159, 241, 607, 759, 768
BstMAI GTCTC 2 cut(s) 830, 842
BstMBI GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
BstMCI CGRYCG 1 cut(s) 217
BstMWI GCNNNNNNNGC 4 cut(s) 430, 565, 898, 1024
BstSFI CTRYAG 1 cut(s) 645
BstSLI GKGCMC 1 cut(s) 9
BstUI CGCG 1 cut(s) 308
BstV1I GCAGC 2 cut(s) 314, 571
BstX2I RGATCY 2 cut(s) 139, 765
BstYI RGATCY 2 cut(s) 139, 765
BstZI CGGCCG 1 cut(s) 214
BsuRI GGCC 1 cut(s) 216
BtgI CCRYGG 2 cut(s) 306, 948
BtrI CACGTC 1 cut(s) 411
BtsCI GGATG 7 cut(s) 90, 316, 334, 618, 770, 879, 1011
BtsI GCAGTG 2 cut(s) 435, 563
BtsIMutI CAGTG 3 cut(s) 435, 563, 837
Cac8I GCNNGC 3 cut(s) 214, 426, 447
CaiI CAGNNNCTG 1 cut(s) 565
Cfr10I RCCGGY 1 cut(s) 212
Cfr13I GGNCC 2 cut(s) 528, 634
Cfr42I CCGCGG 1 cut(s) 309
Csp6I GTAC 1 cut(s) 856
CviAII CATG 1 cut(s) 299
CviQI GTAC 1 cut(s) 856
DdeI CTNAG 3 cut(s) 470, 484, 827
DpnI GATC 7 cut(s) 65, 141, 158, 240, 606, 758, 767
DpnII GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
DriI GACNNNNNGTC 1 cut(s) 499
EaeI YGGCCR 1 cut(s) 214
EagI CGGCCG 1 cut(s) 214
Eam1104I CTCTTC 1 cut(s) 113
Eam1105I GACNNNNNGTC 1 cut(s) 499
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 1 cut(s) 341
EclXI CGGCCG 1 cut(s) 214
Eco130I CCWWGG 1 cut(s) 403
Eco31I GGTCTC 1 cut(s) 842
Eco47I GGWCC 2 cut(s) 528, 634
Eco52I CGGCCG 1 cut(s) 214
EcoT14I CCWWGG 1 cut(s) 403
ErhI CCWWGG 1 cut(s) 403
FaeI CATG 1 cut(s) 302
FaiI YATR 4 cut(s) 227, 300, 476, 809
FaqI GGGAC 2 cut(s) 563, 647
FatI CATG 1 cut(s) 298
FbaI TGATCA 2 cut(s) 63, 238
FblI GTMKAC 1 cut(s) 70
Fnu4HI GCNGC 5 cut(s) 303, 306, 560, 893, 987
FokI GGATG 7 cut(s) 77, 323, 341, 605, 757, 886, 1018
Fsp4HI GCNGC 5 cut(s) 303, 306, 560, 893, 987
FspBI CTAG 1 cut(s) 977
GluI GCNGC 5 cut(s) 303, 306, 560, 893, 987
GsuI CTGGAG 1 cut(s) 817
HaeIII GGCC 1 cut(s) 216
HapII CCGG 1 cut(s) 213
Hin1II CATG 1 cut(s) 302
HincII GTYRAC 2 cut(s) 268, 493
HindII GTYRAC 2 cut(s) 268, 493
HinfI GANTC 1 cut(s) 478
HpaII CCGG 1 cut(s) 213
Hpy166II GTNNAC 6 cut(s) 71, 268, 367, 414, 493, 948
Hpy188I TCNGA 4 cut(s) 127, 284, 532, 917
Hpy188III TCNNGA 4 cut(s) 242, 353, 508, 632
Hpy8I GTNNAC 6 cut(s) 71, 268, 367, 414, 493, 948
Hpy99I CGWCG 1 cut(s) 359
HpyAV CCTTC 4 cut(s) 51, 187, 692, 785
HpyCH4III ACNGT 3 cut(s) 34, 322, 952
HpyCH4IV ACGT 1 cut(s) 410
HpyCH4V TGCA 6 cut(s) 273, 302, 428, 433, 647, 807
HpyF10VI GCNNNNNNNGC 4 cut(s) 430, 565, 898, 1024
HpyF3I CTNAG 3 cut(s) 470, 484, 827
HpySE526I ACGT 1 cut(s) 410
Hsp92II CATG 1 cut(s) 302
KroI GCCGGC 1 cut(s) 212
KroNI GCCGGC 1 cut(s) 214
Ksp22I TGATCA 2 cut(s) 63, 238
KspI CCGCGG 1 cut(s) 309
Kzo9I GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
LmnI GCTCC 3 cut(s) 284, 836, 1024
Lsp1109I GCAGC 2 cut(s) 314, 571
LweI GCATC 4 cut(s) 172, 288, 606, 627
MaeI CTAG 1 cut(s) 977
MaeII ACGT 1 cut(s) 410
MaeIII GTNAC 1 cut(s) 316
MalI GATC 7 cut(s) 65, 141, 158, 240, 606, 758, 767
MboI GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
MboII GAAGA 2 cut(s) 100, 508
MflI RGATCY 2 cut(s) 139, 765
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 8 cut(s) 59, 80, 85, 290, 520, 584, 717, 742
MnlI CCTC 6 cut(s) 129, 184, 265, 344, 633, 870
MroNI GCCGGC 1 cut(s) 212
MroXI GAANNNNTTC 2 cut(s) 503, 515
MseI TTAA 1 cut(s) 866
MspA1I CMGCKG 1 cut(s) 308
MspI CCGG 1 cut(s) 213
Mva1269I GAATGC 1 cut(s) 102
MvnI CGCG 1 cut(s) 308
MwoI GCNNNNNNNGC 4 cut(s) 430, 565, 898, 1024
NaeI GCCGGC 1 cut(s) 214
NdeII GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
NgoMIV GCCGGC 1 cut(s) 212
NlaIII CATG 1 cut(s) 302
NlaIV GGNNCC 2 cut(s) 351, 635
NmuCI GTSAC 1 cut(s) 316
PcsI WCGNNNNNNNCGW 2 cut(s) 416, 921
PctI GAATGC 1 cut(s) 102
PdiI GCCGGC 1 cut(s) 214
PdmI GAANNNNTTC 2 cut(s) 503, 515
PfeI GAWTC 1 cut(s) 478
PkrI GCNGC 5 cut(s) 304, 307, 561, 894, 988
PspN4I GGNNCC 2 cut(s) 351, 635
PspPI GGNCC 2 cut(s) 528, 634
PstI CTGCAG 1 cut(s) 649
PstNI CAGNNNCTG 1 cut(s) 565
PsuI RGATCY 2 cut(s) 139, 765
RsaI GTAC 1 cut(s) 857
RsaNI GTAC 1 cut(s) 856
SacII CCGCGG 1 cut(s) 309
SaqAI TTAA 1 cut(s) 866
SatI GCNGC 5 cut(s) 303, 306, 560, 893, 987
Sau3AI GATC 7 cut(s) 63, 139, 156, 238, 604, 756, 765
Sau96I GGNCC 2 cut(s) 528, 634
SbfI CCTGCAGG 1 cut(s) 649
SdaI CCTGCAGG 1 cut(s) 649
SduI GDGCHC 1 cut(s) 9
SetI ASST 9 cut(s) 43, 121, 155, 257, 289, 413, 447, 833, 864
SfaNI GCATC 4 cut(s) 172, 288, 606, 627
SfcI CTRYAG 1 cut(s) 645
Sfr303I CCGCGG 1 cut(s) 309
SgrBI CCGCGG 1 cut(s) 309
SinI GGWCC 2 cut(s) 528, 634
Sse8387I CCTGCAGG 1 cut(s) 649
Sse9I AATT 8 cut(s) 59, 80, 85, 290, 520, 584, 717, 742
SsiI CCGC 5 cut(s) 306, 308, 326, 893, 986
SspMI CTAG 1 cut(s) 977
StyI CCWWGG 1 cut(s) 403
TaaI ACNGT 3 cut(s) 34, 322, 952
TaiI ACGT 1 cut(s) 413
TaqI TCGA 3 cut(s) 44, 159, 336
TasI AATT 8 cut(s) 59, 80, 85, 290, 520, 584, 717, 742
TatI WGTACW 1 cut(s) 855
TauI GCSGC 3 cut(s) 308, 895, 989
TfiI GAWTC 1 cut(s) 478
Tru1I TTAA 1 cut(s) 866
Tru9I TTAA 1 cut(s) 866
TscAI CASTG 3 cut(s) 435, 570, 844
TseFI GTSAC 1 cut(s) 316
TseI GCWGC 2 cut(s) 302, 559
Tsp45I GTSAC 1 cut(s) 316
TspDTI ATGAA 4 cut(s) 451, 491, 651, 1013
TspGWI ACGGA 2 cut(s) 253, 369
TspRI CASTG 3 cut(s) 435, 570, 844
VpaK11BI GGWCC 2 cut(s) 528, 634
XapI RAATTY 2 cut(s) 290, 742
XmiI GTMKAC 1 cut(s) 70
XmnI GAANNNNTTC 2 cut(s) 503, 515
XspI CTAG 1 cut(s) 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.