Rroxscaffold_2G00137440

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
75275366 .. 75276628
1263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00137440.1

Sequence Viewer

Length: 1263 bp
ATGACTCGGATTCGGCATATCTCCACTATTACTGTCCAACCAACGAGTCACAATGGTCAGTTAGCTCATAGAATCGAGTTAACTCCATGGGATCTTCGACCCATCAAACTTGACTACATCCAAAAGGGGCTTCTCTTCCACAAATATTATTCATCAGAGAATGAAATGAACCAGATCAGCTTGGTCCAACACCTAATATCCTCACTTTCTCAAGCTTTGGACATCTTCTACCCACTTGCTGGCCGCCTTGCAGTGACCGAAAATGAAGATAATAGTACCTCGTGTGTTTTCATCAATTGTAATGACGCCGGAGTCGAATTCTTACACGCAGCTACTGATTGTGTCACAGTGGCCGATATCCTAGATTCCGTGGACGTTCCTGATGACATTGTCTGCCAACTCATTCCCATGAATGGTGTTCGGAACTGTGAAGGCATTTCAAAACCATTGCTTGCAGTGCAAGTAACTGAGCTTGCTGATGGCATCTTCATCGGTTGCAGCATTAACCACTCAGTTGTGGATGCTACCTCTTACTGGCATTTCCTTAATACTTGGTCTGAAATCTCTCGTTCTGGCTCTGATCATCAGATGACCCCTCCTATTTTTCATCGTCAATTTCTTGATGGCGTTATTGAACTCCCAATTCACCTACCCTTACCTTACAATGAATTACTCCCAAGTCAGCAGCAGATTATGGATCAATCATCTTCAGTCTCTTTACGAACTCGGGTTTTTCATTTTCCAAAAGAAAAGGTTGCACAGCTCAAAGCAAAGGCCAATGCTGAGATGGGTACCAATAACATCTCCTCCCTTCAAGCACTCATGGCCCATTTCTGGTGCGCCACAATACGTAACAGACATGATTTAAACCCTGATGAAGAGGTTGGTTATTTCATTGCGACAGGATTGAGACAAAGATTGAAGCCACCATTGCCAAAAGAATACTTTGGGAATGCGCTTGAAGGGATTTCTGTCAAGTCCACTGCAGGTGAGCTGCTACAAAATGGGATAGGATGGGCTGCTCTGCATATAAACAAAAAGATTACCTCCATCACTTCTGATGATGCAAGAAACTATGCAGAGAATTTTGCAAAAAATCCGACGTTTTTCCCAAATCTGAGGGATATTGTACCAAGTCAAACTAGTACTACTGCGTTGCTCACAGGAAGCTCACCGAGGTTCAATGTTTATGGCAATGATTTTGGGTGGGGGAGGCCGCTCTGCTTGCGTGGTGGAGCTGCAGGAAAAAGAATGGGATGTTAA

Protein Analysis

420

Amino Acids

46.69

Weight (kDa)

6.2

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 411 1.4e-74 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 977
AasI GACNNNNNNGTC 1 cut(s) 311
Acc36I ACCTGC 1 cut(s) 977
Acc65I GGTACC 1 cut(s) 791
AccB1I GGYRCC 1 cut(s) 791
AccB7I CCANNNNNTGG 1 cut(s) 239
AccBSI CCGCTC 1 cut(s) 1219
AciI CCGC 2 cut(s) 244, 1217
AclWI GGATC 2 cut(s) 99, 705
AcoI YGGCCR 2 cut(s) 241, 351
AcsI RAATTY 2 cut(s) 317, 1084
AcuI CTGAAG 1 cut(s) 693
AcyI GRCGYC 1 cut(s) 306
AfaI GTAC 4 cut(s) 277, 793, 1131, 1147
AfiI CCNNNNNNNGG 4 cut(s) 239, 413, 534, 834
AgsI TTSAA 6 cut(s) 441, 635, 815, 922, 962, 1183
AhlI ACTAGT 1 cut(s) 1142
AjuI GAANNNNNNNTTGG 2 cut(s) 114, 146
AluBI AGCT 9 cut(s) 65, 180, 215, 332, 472, 763, 994, 1170, 1238
AluI AGCT 9 cut(s) 65, 180, 215, 332, 472, 763, 994, 1170, 1238
Alw26I GTCTC 2 cut(s) 718, 904
AlwI GGATC 2 cut(s) 99, 705
AlwNI CAGNNNCTG 1 cut(s) 335
Ama87I CYCGRG 1 cut(s) 726
AoxI GGCC 5 cut(s) 241, 351, 774, 825, 1214
ApeKI GCWGC 6 cut(s) 329, 498, 685, 994, 1019, 1238
ApoI RAATTY 2 cut(s) 317, 1084
Asp718I GGTACC 1 cut(s) 791
AspLEI GCGC 2 cut(s) 842, 958
AspS9I GGNCC 2 cut(s) 184, 826
AsuHPI GGTGA 3 cut(s) 638, 1001, 1164
AvaI CYCGRG 1 cut(s) 726
AvaII GGWCC 1 cut(s) 184
BanI GGYRCC 1 cut(s) 791
BauI CACGAG 1 cut(s) 280
BbvI GCAGC 6 cut(s) 341, 510, 697, 981, 1006, 1225
BccI CCATC 6 cut(s) 110, 473, 617, 781, 1008, 1058
BcgI CGANNNNNNTGC 2 cut(s) 472, 506
BclI TGATCA 1 cut(s) 580
BcoDI GTCTC 2 cut(s) 718, 904
BcuI ACTAGT 1 cut(s) 1142
BfaI CTAG 2 cut(s) 362, 1143
BfmI CTRYAG 2 cut(s) 984, 1239
BfuAI ACCTGC 1 cut(s) 977
BisI GCNGC 8 cut(s) 244, 330, 499, 686, 995, 1020, 1217, 1239
BlsI GCNGC 8 cut(s) 245, 331, 500, 687, 996, 1021, 1218, 1240
BmcAI AGTACT 1 cut(s) 1147
Bme18I GGWCC 1 cut(s) 184
BmeT110I CYCGRG 1 cut(s) 726
BmgT120I GGNCC 2 cut(s) 184, 826
BmiI GGNNCC 1 cut(s) 793
BmsI GCATC 3 cut(s) 492, 511, 1054
BpuEI CTTGAG 1 cut(s) 195
BsaAI YACGTR 1 cut(s) 851
BsaHI GRCGYC 1 cut(s) 306
BsaJI CCNNGG 3 cut(s) 86, 369, 1175
BsaXI ACNNNNNCTCC 2 cut(s) 791, 821
Bsc4I CCNNNNNNNGG 4 cut(s) 239, 413, 534, 834
Bse1I ACTGG 1 cut(s) 539
Bse3DI GCAATG 4 cut(s) 446, 894, 929, 1201
BseDI CCNNGG 3 cut(s) 86, 369, 1175
BseGI GGATG 4 cut(s) 117, 526, 1019, 1262
BseLI CCNNNNNNNGG 4 cut(s) 239, 413, 534, 834
BseMI GCAATG 4 cut(s) 446, 894, 929, 1201
BseMII CTCAG 4 cut(s) 459, 525, 774, 1109
BseNI ACTGG 1 cut(s) 539
BseRI GAGGAG 1 cut(s) 796
BseXI GCAGC 6 cut(s) 341, 510, 697, 981, 1006, 1225
BshFI GGCC 5 cut(s) 243, 353, 776, 827, 1216
BshNI GGYRCC 1 cut(s) 791
BsiHKCI CYCGRG 1 cut(s) 726
BsiSI CCGG 1 cut(s) 309
BslI CCNNNNNNNGG 4 cut(s) 239, 413, 534, 834
BsmAI GTCTC 2 cut(s) 718, 904
BsmI GAATGC 1 cut(s) 958
BsnI GGCC 5 cut(s) 243, 353, 776, 827, 1216
BsoBI CYCGRG 1 cut(s) 726
Bsp143I GATC 4 cut(s) 91, 174, 580, 697
Bsp19I CCATGG 1 cut(s) 86
BspACI CCGC 2 cut(s) 244, 1217
BspANI GGCC 5 cut(s) 243, 353, 776, 827, 1216
BspCNI CTCAG 4 cut(s) 460, 524, 775, 1110
BspLI GGNNCC 1 cut(s) 793
BspMAI CTGCAG 2 cut(s) 988, 1243
BspMI ACCTGC 1 cut(s) 977
BspPI GGATC 2 cut(s) 99, 705
BspT107I GGYRCC 1 cut(s) 791
BsrBI CCGCTC 1 cut(s) 1219
BsrDI GCAATG 4 cut(s) 446, 894, 929, 1201
BsrI ACTGG 1 cut(s) 539
BssECI CCNNGG 3 cut(s) 86, 369, 1175
BssMI GATC 4 cut(s) 91, 174, 580, 697
BssNI GRCGYC 1 cut(s) 306
BssSI CACGAG 1 cut(s) 280
BssT1I CCWWGG 1 cut(s) 86
Bst2BI CACGAG 1 cut(s) 280
Bst4CI ACNGT 3 cut(s) 34, 349, 428
Bst6I CTCTTC 2 cut(s) 140, 873
BstACI GRCGYC 1 cut(s) 306
BstBAI YACGTR 1 cut(s) 851
BstC8I GCNNGC 4 cut(s) 241, 453, 474, 1226
BstDEI CTNAG 4 cut(s) 468, 511, 783, 1118
BstDSI CCRYGG 2 cut(s) 86, 369
BstF5I GGATG 4 cut(s) 117, 526, 1019, 1262
BstHHI GCGC 2 cut(s) 842, 958
BstKTI GATC 4 cut(s) 94, 177, 583, 700
BstMAI GTCTC 2 cut(s) 718, 904
BstMBI GATC 4 cut(s) 91, 174, 580, 697
BstMWI GCNNNNNNNGC 4 cut(s) 457, 824, 931, 1225
BstSFI CTRYAG 2 cut(s) 984, 1239
BstSNI TACGTA 1 cut(s) 851
BstV1I GCAGC 6 cut(s) 341, 510, 697, 981, 1006, 1225
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
BsuRI GGCC 5 cut(s) 243, 353, 776, 827, 1216
BtgI CCRYGG 2 cut(s) 86, 369
BtsCI GGATG 4 cut(s) 117, 526, 1019, 1262
BtsI GCAGTG 3 cut(s) 258, 462, 981
BtsIMutI CAGTG 4 cut(s) 258, 354, 462, 981
BveI ACCTGC 1 cut(s) 977
Cac8I GCNNGC 4 cut(s) 241, 453, 474, 1226
CaiI CAGNNNCTG 1 cut(s) 335
CfoI GCGC 2 cut(s) 842, 958
Cfr13I GGNCC 2 cut(s) 184, 826
CseI GACGC 1 cut(s) 314
Csp6I GTAC 4 cut(s) 276, 792, 1130, 1146
CviAII CATG 4 cut(s) 87, 409, 823, 860
CviQI GTAC 4 cut(s) 276, 792, 1130, 1146
DdeI CTNAG 4 cut(s) 468, 511, 783, 1118
DpnI GATC 4 cut(s) 93, 176, 582, 699
DpnII GATC 4 cut(s) 91, 174, 580, 697
DraI TTTAAA 1 cut(s) 867
DrdI GACNNNNNNGTC 1 cut(s) 311
DseDI GACNNNNNNGTC 1 cut(s) 311
EaeI YGGCCR 2 cut(s) 241, 351
Eam1104I CTCTTC 2 cut(s) 140, 873
EarI CTCTTC 2 cut(s) 140, 873
Eco105I TACGTA 1 cut(s) 851
Eco130I CCWWGG 1 cut(s) 86
Eco32I GATATC 1 cut(s) 358
Eco47I GGWCC 1 cut(s) 184
Eco57I CTGAAG 1 cut(s) 693
Eco88I CYCGRG 1 cut(s) 726
EcoRI GAATTC 1 cut(s) 317
EcoRV GATATC 1 cut(s) 358
EcoT14I CCWWGG 1 cut(s) 86
ErhI CCWWGG 1 cut(s) 86
FaeI CATG 4 cut(s) 90, 412, 826, 863
FatI CATG 4 cut(s) 86, 408, 822, 859
FbaI TGATCA 1 cut(s) 580
Fnu4HI GCNGC 8 cut(s) 244, 330, 499, 686, 995, 1020, 1217, 1239
FokI GGATG 3 cut(s) 104, 533, 1026
Fsp4HI GCNGC 8 cut(s) 244, 330, 499, 686, 995, 1020, 1217, 1239
FspBI CTAG 2 cut(s) 362, 1143
GlaI GCGC 2 cut(s) 841, 957
GluI GCNGC 8 cut(s) 244, 330, 499, 686, 995, 1020, 1217, 1239
HaeIII GGCC 5 cut(s) 243, 353, 776, 827, 1216
HapII CCGG 1 cut(s) 309
HgaI GACGC 1 cut(s) 314
HhaI GCGC 2 cut(s) 842, 958
Hin1I GRCGYC 1 cut(s) 306
Hin1II CATG 4 cut(s) 90, 412, 826, 863
Hin6I GCGC 2 cut(s) 840, 956
HinP1I GCGC 2 cut(s) 840, 956
HincII GTYRAC 1 cut(s) 81
HindII GTYRAC 1 cut(s) 81
HindIII AAGCTT 1 cut(s) 213
HinfI GANTC 6 cut(s) 4, 10, 46, 72, 312, 365
HpaI GTTAAC 1 cut(s) 81
HpaII CCGG 1 cut(s) 309
HphI GGTGA 3 cut(s) 638, 1001, 1164
Hpy166II GTNNAC 3 cut(s) 81, 373, 981
Hpy188I TCNGA 9 cut(s) 9, 157, 423, 559, 580, 588, 1060, 1101, 1119
Hpy188III TCNNGA 2 cut(s) 380, 620
Hpy8I GTNNAC 3 cut(s) 81, 373, 981
Hpy99I CGWCG 1 cut(s) 1105
HpyAV CCTTC 3 cut(s) 425, 821, 956
HpyCH4III ACNGT 3 cut(s) 34, 349, 428
HpyCH4IV ACGT 3 cut(s) 375, 850, 1103
HpyF10VI GCNNNNNNNGC 4 cut(s) 457, 824, 931, 1225
HpyF3I CTNAG 4 cut(s) 468, 511, 783, 1118
HpySE526I ACGT 3 cut(s) 375, 850, 1103
Hsp92I GRCGYC 1 cut(s) 306
Hsp92II CATG 4 cut(s) 90, 412, 826, 863
HspAI GCGC 2 cut(s) 840, 956
KpnI GGTACC 1 cut(s) 795
Ksp22I TGATCA 1 cut(s) 580
KspAI GTTAAC 1 cut(s) 81
Kzo9I GATC 4 cut(s) 91, 174, 580, 697
LmnI GCTCC 1 cut(s) 1235
Lsp1109I GCAGC 6 cut(s) 341, 510, 697, 981, 1006, 1225
LweI GCATC 3 cut(s) 492, 511, 1054
MaeI CTAG 2 cut(s) 362, 1143
MaeII ACGT 3 cut(s) 375, 850, 1103
MaeIII GTNAC 5 cut(s) 47, 253, 343, 463, 851
MalI GATC 4 cut(s) 93, 176, 582, 699
MbiI CCGCTC 1 cut(s) 1219
MboI GATC 4 cut(s) 91, 174, 580, 697
MboII GAAGA 7 cut(s) 86, 127, 217, 278, 478, 699, 890
MfeI CAATTG 1 cut(s) 295
MflI RGATCY 1 cut(s) 91
MluCI AATT 6 cut(s) 295, 317, 614, 642, 668, 1084
MlyI GAGTC 2 cut(s) 55, 321
MmeI TCCRAC 3 cut(s) 61, 211, 1124
MseI TTAA 5 cut(s) 80, 504, 546, 866, 1261
MslI CAYNNNNRTG 1 cut(s) 407
MspI CCGG 1 cut(s) 309
MunI CAATTG 1 cut(s) 295
Mva1269I GAATGC 1 cut(s) 958
MwoI GCNNNNNNNGC 4 cut(s) 457, 824, 931, 1225
NcoI CCATGG 1 cut(s) 86
NdeII GATC 4 cut(s) 91, 174, 580, 697
NlaIII CATG 4 cut(s) 90, 412, 826, 863
NlaIV GGNNCC 1 cut(s) 793
NmuCI GTSAC 3 cut(s) 47, 253, 343
PaqCI CACCTGC 1 cut(s) 977
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PctI GAATGC 1 cut(s) 958
PfeI GAWTC 3 cut(s) 10, 72, 365
PflFI GACNNNGTC 1 cut(s) 389
PflMI CCANNNNNTGG 1 cut(s) 239
PkrI GCNGC 8 cut(s) 245, 331, 500, 687, 996, 1021, 1218, 1240
PleI GAGTC 2 cut(s) 54, 320
PpsI GAGTC 2 cut(s) 54, 320
Ppu21I YACGTR 1 cut(s) 851
PspN4I GGNNCC 1 cut(s) 793
PspPI GGNCC 2 cut(s) 184, 826
PstI CTGCAG 2 cut(s) 988, 1243
PstNI CAGNNNCTG 1 cut(s) 335
PsuI RGATCY 1 cut(s) 91
PsyI GACNNNGTC 1 cut(s) 389
RsaI GTAC 4 cut(s) 277, 793, 1131, 1147
RsaNI GTAC 4 cut(s) 276, 792, 1130, 1146
RseI CAYNNNNRTG 1 cut(s) 407
SaqAI TTAA 5 cut(s) 80, 504, 546, 866, 1261
SatI GCNGC 8 cut(s) 244, 330, 499, 686, 995, 1020, 1217, 1239
Sau3AI GATC 4 cut(s) 91, 174, 580, 697
Sau96I GGNCC 2 cut(s) 184, 826
ScaI AGTACT 1 cut(s) 1147
SchI GAGTC 2 cut(s) 55, 321
SfaNI GCATC 3 cut(s) 492, 511, 1054
SfcI CTRYAG 2 cut(s) 984, 1239
SinI GGWCC 1 cut(s) 184
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 1 cut(s) 210
SmoI CTYRAG 1 cut(s) 210
SnaBI TACGTA 1 cut(s) 851
SpeI ACTAGT 1 cut(s) 1142
Sse9I AATT 6 cut(s) 295, 317, 614, 642, 668, 1084
SsiI CCGC 2 cut(s) 244, 1217
SspI AATATT 1 cut(s) 146
SspMI CTAG 2 cut(s) 362, 1143
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 3 cut(s) 34, 349, 428
TaiI ACGT 3 cut(s) 378, 853, 1106
TaqI TCGA 3 cut(s) 75, 97, 315
TaqII GACCGA 1 cut(s) 272
TasI AATT 6 cut(s) 295, 317, 614, 642, 668, 1084
TatI WGTACW 1 cut(s) 1145
TauI GCSGC 2 cut(s) 246, 1219
TfiI GAWTC 3 cut(s) 10, 72, 365
Tru1I TTAA 5 cut(s) 80, 504, 546, 866, 1261
Tru9I TTAA 5 cut(s) 80, 504, 546, 866, 1261
TscAI CASTG 4 cut(s) 258, 354, 462, 988
TseFI GTSAC 3 cut(s) 47, 253, 343
TseI GCWGC 6 cut(s) 329, 498, 685, 994, 1019, 1238
Tsp45I GTSAC 3 cut(s) 47, 253, 343
TspGWI ACGGA 1 cut(s) 358
TspRI CASTG 4 cut(s) 258, 354, 462, 988
Tth111I GACNNNGTC 1 cut(s) 389
Van91I CCANNNNNTGG 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 184
XapI RAATTY 2 cut(s) 317, 1084
XcmI CCANNNNNNNNNTGG 1 cut(s) 784
XspI CTAG 2 cut(s) 362, 1143
ZrmI AGTACT 1 cut(s) 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.