AT5G38130

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
15217819 .. 15219372
1554 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G38130.1

Sequence Viewer

Length: 1389 bp
ATGCCATTTGATTTATTTCTATCTTACAAAGTTTTTCATCTTCTTTTCTATAGACGCAAAATGGTAGAAGTGACCGTGATATCTTCAACTATGGTACGACCCGAAAACATAAACCAAACGGGTCGTCAAAAAATCCATCTAACTCCACATGATCTTGACCTTCTTTATCTTTTTTATCCTCAAAGAGGTCTACTCTTCCACAAACCCGACCCGGAAAACAGTATCATTCCTCGATTAATGGCTTCTCTTTCCACTGCCTTAGAGATTTATTTCCCGTTTGCTGGTCGTCTCGTCAAAGTAAACAATCACGAAGATGATACGGTGTCGTTTTACATCGACTGTGATGGTTTGGGTGCTAAATTCGTCCATGCGAAAGCCGAATCTATCACCGTGAATGATGTCCTTCAATCTCATGGGTCTGTTCCTTATTTCATATCGAAATTTTTCCCCGCGAACAATGTCCAAAGCCGTGATGCCCTTGTCTCGGAGCCCTTGCTTGCGTTGCAAGTCACCGAGATGAAAGATGGAGTGTTCATTAGTTTTGGTTACAATCACATGGTGGCCGATGGTACTTGCTTCTGGAAGTTCTTTCACACTTGGTCCAAGATTTGTCTGAATGGTTCGGATCCTAGTATTCAGTCTATTGTTCTCAAAGATTGGTTTTGTGACGGGATCGATTACCCGGTACATGTTCCGGTTTTAGAGATGGAGACGCTACCACGTTGGGAACCTTCAACTAAAGAGAGAGTTTTTCACTTGTCAAAGAAGAACATTTTAGATCTCAAAGCGAAAGCCAACAACGAAATTGACACCAATGATCTGAAAATCTCGTCTCTTCAAGCGGTTGTGGCATATCTATGGCTATCAATCATCAGACACAGTGGTCTAAACCGGGAAGAAGAAACACAATGCAATGTAGCGGCGGATATGAGACCGAGGCTAAACCCTCTTCTCAAGAAAGAGTGTTTTGGGAATGTAACCAATCTCGCAACGGCTACAACCACTGTGGGAGAGCTGTTGGATCATGGGCTAGGCTGGACTGCTTTGCAAATAAGTAAATCCGTAAGGTCAGAAACAAATGAGAGTTATGAAGTTTTTGCAAAGAATTGGGTTAGAAATGTTAAGAGACCAAAAACATCGTTTGGAAGTAGATTGGCTAACAATTCTTTGATCATCTCAAGCTCTCCACGGTTTGAAGTGTACGAACATGATTTCGGTTGGGGAAAACCAATCGCGGCTCGAGCTGGACCGGCTGATGGTGCTGGTGGTATGCTTGTAATGTTTCGAGGAGTTGAAGAAGGGAGTATTGATGTTCATGCGACCTTAAATTCTTCTTTATGGTCTGATGTACTAGTGAACCTGTTGACCAATGATATGGTTGGTCAATAA

Protein Analysis

462

Amino Acids

52.09

Weight (kDa)

6.32

Isoelectric Point (pI)

38.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 23 - 444 2.7e-64 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 882
AccI GTMKAC 1 cut(s) 190
AccII CGCG 2 cut(s) 452, 1235
AciI CCGC 5 cut(s) 450, 842, 920, 923, 1235
AclWI GGATC 4 cut(s) 620, 633, 680, 1029
AcoI YGGCCR 1 cut(s) 561
AcsI RAATTY 3 cut(s) 359, 440, 1327
AdeI CACNNNGTG 1 cut(s) 559
AfaI GTAC 5 cut(s) 96, 571, 687, 1202, 1350
AfiI CCNNNNNNNGG 4 cut(s) 185, 281, 484, 1256
AflIII ACRYGT 1 cut(s) 688
AgsI TTSAA 6 cut(s) 87, 407, 735, 839, 1196, 1295
AhlI ACTAGT 1 cut(s) 1351
AluBI AGCT 3 cut(s) 1015, 1182, 1244
AluI AGCT 3 cut(s) 1015, 1182, 1244
Alw26I GTCTC 6 cut(s) 293, 487, 704, 837, 925, 1120
AlwI GGATC 4 cut(s) 620, 633, 680, 1029
Ama87I CYCGRG 1 cut(s) 1239
AoxI GGCC 1 cut(s) 561
ApoI RAATTY 3 cut(s) 359, 440, 1327
ArsI GACNNNNNNTTYG 2 cut(s) 109, 141
AseI ATTAAT 1 cut(s) 236
Asp700I GAANNNNTTC 1 cut(s) 443
AspS9I GGNCC 2 cut(s) 600, 1247
AsuC2I CCSGG 3 cut(s) 212, 683, 893
AsuHPI GGTGA 2 cut(s) 379, 502
AvaI CYCGRG 1 cut(s) 1239
AvaII GGWCC 2 cut(s) 600, 1247
BamHI GGATCC 1 cut(s) 625
BanII GRGCYC 1 cut(s) 492
BccI CCATC 6 cut(s) 144, 338, 518, 560, 700, 1250
BceAI ACGGC 2 cut(s) 453, 1008
BclI TGATCA 1 cut(s) 1170
BcnI CCSGG 3 cut(s) 212, 683, 893
BcoDI GTCTC 6 cut(s) 293, 487, 704, 837, 925, 1120
BcuI ACTAGT 1 cut(s) 1351
BfaI CTAG 3 cut(s) 630, 1031, 1352
BfmI CTRYAG 1 cut(s) 49
BglII AGATCT 1 cut(s) 778
BisI GCNGC 2 cut(s) 921, 1236
BlsI GCNGC 2 cut(s) 922, 1237
Bme1390I CCNGG 3 cut(s) 212, 683, 893
Bme18I GGWCC 2 cut(s) 600, 1247
BmeT110I CYCGRG 1 cut(s) 1239
BmgT120I GGNCC 2 cut(s) 600, 1247
BmiI GGNNCC 3 cut(s) 489, 627, 729
BmrFI CCNGG 3 cut(s) 212, 683, 893
BmsI GCATC 1 cut(s) 463
BplI GAGNNNNNCTC 2 cut(s) 177, 209
BpuEI CTTGAG 2 cut(s) 938, 1162
BpuMI CCSGG 3 cut(s) 212, 683, 893
Bsa29I ATCGAT 1 cut(s) 675
BsaI GGTCTC 2 cut(s) 925, 1120
BsaJI CCNNGG 2 cut(s) 935, 1187
BsaWI WCCGGW 1 cut(s) 694
Bsc4I CCNNNNNNNGG 4 cut(s) 185, 281, 484, 1256
Bse118I RCCGGY 1 cut(s) 1249
Bse3DI GCAATG 1 cut(s) 919
BseCI ATCGAT 1 cut(s) 675
BseDI CCNNGG 2 cut(s) 935, 1187
BseLI CCNNNNNNNGG 4 cut(s) 185, 281, 484, 1256
BseMI GCAATG 1 cut(s) 919
BseRI GAGGAG 1 cut(s) 1302
Bsh1236I CGCG 2 cut(s) 452, 1235
BshFI GGCC 1 cut(s) 563
BshVI ATCGAT 1 cut(s) 675
BsiHKCI CYCGRG 1 cut(s) 1239
BsiSI CCGG 5 cut(s) 212, 683, 695, 892, 1250
BslI CCNNNNNNNGG 4 cut(s) 185, 281, 484, 1256
BsmAI GTCTC 6 cut(s) 293, 487, 704, 837, 925, 1120
BsmBI CGTCTC 3 cut(s) 293, 704, 837
BsnI GGCC 1 cut(s) 563
Bso31I GGTCTC 2 cut(s) 925, 1120
BsoBI CYCGRG 1 cut(s) 1239
Bsp1286I GDGCHC 1 cut(s) 492
Bsp143I GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
BspACI CCGC 5 cut(s) 450, 842, 920, 923, 1235
BspANI GGCC 1 cut(s) 563
BspDI ATCGAT 1 cut(s) 675
BspFNI CGCG 2 cut(s) 452, 1235
BspLI GGNNCC 3 cut(s) 489, 627, 729
BspPI GGATC 4 cut(s) 620, 633, 680, 1029
BspTNI GGTCTC 2 cut(s) 925, 1120
BsrDI GCAATG 1 cut(s) 919
BsrFI RCCGGY 1 cut(s) 1249
BssAI RCCGGY 1 cut(s) 1249
BssECI CCNNGG 2 cut(s) 935, 1187
BssMI GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
Bst4CI ACNGT 8 cut(s) 76, 221, 322, 341, 391, 881, 1006, 1191
Bst6I CTCTTC 3 cut(s) 200, 840, 954
BstC8I GCNNGC 1 cut(s) 498
BstDEI CTNAG 1 cut(s) 259
BstDSI CCRYGG 1 cut(s) 1187
BstENI CCTNNNNNAGG 1 cut(s) 183
BstFNI CGCG 2 cut(s) 452, 1235
BstKTI GATC 7 cut(s) 154, 628, 675, 781, 820, 1024, 1173
BstMAI GTCTC 6 cut(s) 293, 487, 704, 837, 925, 1120
BstMBI GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
BstMWI GCNNNNNNNGC 5 cut(s) 502, 848, 1241, 1250, 1259
BstNSI RCATGY 1 cut(s) 692
BstSCI CCNGG 3 cut(s) 210, 681, 891
BstSFI CTRYAG 1 cut(s) 49
BstUI CGCG 2 cut(s) 452, 1235
BstX2I RGATCY 2 cut(s) 625, 778
BstXI CCANNNNNNTGG 1 cut(s) 1375
BstYI RGATCY 2 cut(s) 625, 778
Bsu15I ATCGAT 1 cut(s) 675
BsuRI GGCC 1 cut(s) 563
BsuTUI ATCGAT 1 cut(s) 675
BtgI CCRYGG 1 cut(s) 1187
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 3 cut(s) 252, 886, 1002
Cac8I GCNNGC 1 cut(s) 498
Cfr10I RCCGGY 1 cut(s) 1249
Cfr13I GGNCC 2 cut(s) 600, 1247
ClaI ATCGAT 1 cut(s) 675
CseI GACGC 2 cut(s) 63, 721
Csp6I GTAC 5 cut(s) 95, 570, 686, 1201, 1349
CspCI CAANNNNNGTGG 2 cut(s) 987, 1022
CviAII CATG 8 cut(s) 149, 368, 413, 556, 689, 1025, 1208, 1316
CviQI GTAC 5 cut(s) 95, 570, 686, 1201, 1349
DdeI CTNAG 1 cut(s) 259
DpnI GATC 7 cut(s) 153, 627, 674, 780, 819, 1023, 1172
DpnII GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
DraIII CACNNNGTG 1 cut(s) 559
DrdI GACNNNNNNGTC 1 cut(s) 882
DseDI GACNNNNNNGTC 1 cut(s) 882
EaeI YGGCCR 1 cut(s) 561
Eam1104I CTCTTC 3 cut(s) 200, 840, 954
EarI CTCTTC 3 cut(s) 200, 840, 954
EciI GGCGGA 1 cut(s) 938
Eco24I GRGCYC 1 cut(s) 492
Eco31I GGTCTC 2 cut(s) 925, 1120
Eco32I GATATC 1 cut(s) 81
Eco47I GGWCC 2 cut(s) 600, 1247
Eco88I CYCGRG 1 cut(s) 1239
EcoNI CCTNNNNNAGG 1 cut(s) 183
EcoRV GATATC 1 cut(s) 81
EcoT38I GRGCYC 1 cut(s) 492
Esp3I CGTCTC 3 cut(s) 293, 704, 837
FaeI CATG 8 cut(s) 152, 371, 416, 559, 692, 1028, 1211, 1319
FatI CATG 8 cut(s) 148, 367, 412, 555, 688, 1024, 1207, 1315
FauI CCCGC 1 cut(s) 457
FbaI TGATCA 1 cut(s) 1170
FblI GTMKAC 1 cut(s) 190
Fnu4HI GCNGC 2 cut(s) 921, 1236
FriOI GRGCYC 1 cut(s) 492
Fsp4HI GCNGC 2 cut(s) 921, 1236
FspBI CTAG 3 cut(s) 630, 1031, 1352
GluI GCNGC 2 cut(s) 921, 1236
HaeIII GGCC 1 cut(s) 563
HapII CCGG 5 cut(s) 212, 683, 695, 892, 1250
HgaI GACGC 2 cut(s) 63, 721
Hin1II CATG 8 cut(s) 152, 371, 416, 559, 692, 1028, 1211, 1319
HincII GTYRAC 1 cut(s) 1365
HindII GTYRAC 1 cut(s) 1365
HinfI GANTC 1 cut(s) 380
HpaII CCGG 5 cut(s) 212, 683, 695, 892, 1250
HphI GGTGA 2 cut(s) 379, 502
Hpy166II GTNNAC 5 cut(s) 191, 301, 1201, 1357, 1365
Hpy188I TCNGA 7 cut(s) 487, 615, 625, 822, 875, 1072, 1345
Hpy188III TCNNGA 4 cut(s) 155, 308, 580, 955
Hpy8I GTNNAC 5 cut(s) 191, 301, 1201, 1357, 1365
HpyAV CCTTC 4 cut(s) 170, 413, 741, 1292
HpyCH4III ACNGT 8 cut(s) 76, 221, 322, 341, 391, 881, 1006, 1191
HpyCH4IV ACGT 1 cut(s) 721
HpyCH4V TGCA 4 cut(s) 505, 912, 1048, 1100
HpyF10VI GCNNNNNNNGC 5 cut(s) 502, 848, 1241, 1250, 1259
HpyF3I CTNAG 1 cut(s) 259
HpySE526I ACGT 1 cut(s) 721
Hsp92II CATG 8 cut(s) 152, 371, 416, 559, 692, 1028, 1211, 1319
Ksp22I TGATCA 1 cut(s) 1170
Kzo9I GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
LmnI GCTCC 1 cut(s) 487
LweI GCATC 1 cut(s) 463
MaeI CTAG 3 cut(s) 630, 1031, 1352
MaeII ACGT 1 cut(s) 721
MaeIII GTNAC 5 cut(s) 70, 508, 545, 665, 976
MalI GATC 7 cut(s) 153, 627, 674, 780, 819, 1023, 1172
MboI GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
MflI RGATCY 2 cut(s) 625, 778
MhlI GDGCHC 1 cut(s) 492
MluCI AATT 6 cut(s) 359, 440, 804, 1105, 1162, 1327
MmeI TCCRAC 1 cut(s) 999
MnlI CCTC 6 cut(s) 179, 189, 240, 930, 957, 1280
MroXI GAANNNNTTC 1 cut(s) 443
MseI TTAA 3 cut(s) 236, 1122, 1325
MslI CAYNNNNRTG 3 cut(s) 312, 515, 856
MspI CCGG 5 cut(s) 212, 683, 695, 892, 1250
MspR9I CCNGG 3 cut(s) 212, 683, 893
MvnI CGCG 2 cut(s) 452, 1235
MwoI GCNNNNNNNGC 5 cut(s) 502, 848, 1241, 1250, 1259
NciI CCSGG 3 cut(s) 212, 683, 893
NdeII GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
NlaIII CATG 8 cut(s) 152, 371, 416, 559, 692, 1028, 1211, 1319
NlaIV GGNNCC 3 cut(s) 489, 627, 729
NmuCI GTSAC 3 cut(s) 70, 508, 665
NspI RCATGY 1 cut(s) 692
PaeR7I CTCGAG 1 cut(s) 1239
PciI ACATGT 1 cut(s) 688
PdmI GAANNNNTTC 1 cut(s) 443
PfeI GAWTC 1 cut(s) 380
PkrI GCNGC 2 cut(s) 922, 1237
PscI ACATGT 1 cut(s) 688
PshBI ATTAAT 1 cut(s) 236
PspN4I GGNNCC 3 cut(s) 489, 627, 729
PspPI GGNCC 2 cut(s) 600, 1247
PspXI VCTCGAGB 1 cut(s) 1239
PsuI RGATCY 2 cut(s) 625, 778
RsaI GTAC 5 cut(s) 96, 571, 687, 1202, 1350
RsaNI GTAC 5 cut(s) 95, 570, 686, 1201, 1349
RseI CAYNNNNRTG 3 cut(s) 312, 515, 856
SaqAI TTAA 3 cut(s) 236, 1122, 1325
SatI GCNGC 2 cut(s) 921, 1236
Sau3AI GATC 7 cut(s) 151, 625, 672, 778, 817, 1021, 1170
Sau96I GGNCC 2 cut(s) 600, 1247
ScrFI CCNGG 3 cut(s) 212, 683, 893
SduI GDGCHC 1 cut(s) 492
SfaNI GCATC 1 cut(s) 463
SfcI CTRYAG 1 cut(s) 49
Sfr274I CTCGAG 1 cut(s) 1239
SinI GGWCC 2 cut(s) 600, 1247
SlaI CTCGAG 1 cut(s) 1239
SmiMI CAYNNNNRTG 3 cut(s) 312, 515, 856
SmlI CTYRAG 3 cut(s) 953, 1177, 1239
SmoI CTYRAG 3 cut(s) 953, 1177, 1239
SpeI ACTAGT 1 cut(s) 1351
Sse9I AATT 6 cut(s) 359, 440, 804, 1105, 1162, 1327
SsiI CCGC 5 cut(s) 450, 842, 920, 923, 1235
SspMI CTAG 3 cut(s) 630, 1031, 1352
StyD4I CCNGG 3 cut(s) 210, 681, 891
TaaI ACNGT 8 cut(s) 76, 221, 322, 341, 391, 881, 1006, 1191
TaiI ACGT 1 cut(s) 724
TaqI TCGA 6 cut(s) 232, 336, 437, 675, 1240, 1285
TaqII GACCGA 1 cut(s) 949
TasI AATT 6 cut(s) 359, 440, 804, 1105, 1162, 1327
TatI WGTACW 1 cut(s) 1348
TauI GCSGC 2 cut(s) 923, 1238
TfiI GAWTC 1 cut(s) 380
Tru1I TTAA 3 cut(s) 236, 1122, 1325
Tru9I TTAA 3 cut(s) 236, 1122, 1325
TscAI CASTG 3 cut(s) 259, 886, 1009
TseFI GTSAC 3 cut(s) 70, 508, 665
Tsp45I GTSAC 3 cut(s) 70, 508, 665
TspDTI ATGAA 6 cut(s) 26, 421, 523, 533, 1104, 1304
TspGWI ACGGA 1 cut(s) 1051
TspRI CASTG 3 cut(s) 259, 886, 1009
VpaK11BI GGWCC 2 cut(s) 600, 1247
VspI ATTAAT 1 cut(s) 236
XagI CCTNNNNNAGG 1 cut(s) 183
XapI RAATTY 3 cut(s) 359, 440, 1327
XceI RCATGY 1 cut(s) 692
XhoI CTCGAG 1 cut(s) 1239
XmiI GTMKAC 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 443
XspI CTAG 3 cut(s) 630, 1031, 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.