Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000375

Physical Location & Seq

Genomic Coordinates Forward (+)

23622309 .. 23623676

Gene Structure 1368 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1197100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGGACACGTTCGCTGCATCTCCACAACCACTGTTCAACCCACAAGCCAGAACGAGTCCACTCAGAGAATTGAGTTAACCCCATGGGATCTGCAGTTCATCCTATTCGGCTACGCCCAAAAGGGCCTTCTCTTCCACAAACCAAACTCCACTACTTATGACAAGTACCCAAACAAAAGCTTGATCCAACACCTACAAGCCTCCCTCTCCCTCACACTGGACATCTTCTATCCCCTTGCCGGCCGTCTTGCCATCACCGAAAATGAAGACGACAACATCACCTCCTTCTCCGTCGATTGCAATGGCACCGGAGCCCAATTTGTCTATGCTGTTGCTGATGGTGTCACGGTTGCTGATATTCTTGACCCTGTTTTGGTTCCCAGTGACATTGTTCACTCATTCTTTTTTATGAATGGAGTTTTGAACTATGAAGGCGTGTCCAAACCCTTGCTTGCAGTACAAGTAACTGAGCTGGTTGATGGCATTTTCATAGGTTTCACTATGAACCACTCTGTCGTTGATGGATCAACATTTTGGCTTTTCTTCAATACTTGGTCAGAAATATCTCGGCATGCAGAAACTAGTACTGCAAGTTGTGGTAAAATTTCGCAACCTCCTCCTATTTTCAGCCGTGAATTTTTTGACGGCATCATTGATTTTCCGGTTCGAATTCCAAACTTTCACAATCAAATCCCGAAAAATAGGTCTTCCACACCACCCGCCGCCCTCCATCAAAGAATATTTAAATTTTCGAAAGAAAAAATTGCTCAACTCAAAGCCAAAGCCAATGCTGAGATGGGCACCACTAAGATCTCATCCCTTCAAGCACTCTTGGCTCATCTTTGGTTGTCCATAATCCGCAACAAACATTTCAACCCCGACCAAGAGACCAAGTATACCTTACAAATAGGCTTAAGACAAAGATTCCAATCGCCTTTACCTGAAGAGTACCTCGGAAATCTGGTTCAGTTTGGCACGGCGACATCCACCGTGATCGATTTGCTCGAGCACGGACTAGGCTGGGCGGCTTGGGAAATAAACAAGATGATTGCTTCCAAGACGAAAGACGAGGTGAGAAAGTATTTGGAGGAATGGATAGAGAGTCCAAAACTGTTCCAACTGAATAATTTGGCAAGCGATTACTCATTCGGGACGGGAAGCTCACCGCGGTTCAATATGTACGGTAATGACTTTGGTTGGGGAAGGCCTCTGGCAGTTAAAAGTGGCTCATCCAACAAGGCTGAGGGAAAGTTGACAGTGGCTCCTGGGGCAGAAGATGGAAGTATAGAGTTTGAAGCTTGTTTGCCACCTCAGACACTGCAAGATTTGGCCGAGGACGCAGAGTTCTTGGCCAGCTTGTCCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0006082 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009696 GO:0009697 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010817 GO:0016053 GO:0016999 GO:0017000 GO:0017144 GO:0018958 GO:0019438 GO:0019752 GO:0031347 GO:0032101 GO:0032787 GO:0042221 GO:0042445 GO:0042446 GO:0042537 GO:0043207 GO:0043436 GO:0043900 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0046189 GO:0046394 GO:0048583 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071704 GO:0072330 GO:0080134 GO:1900150 GO:1900424 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

456

Amino Acids

50.65

Weight (kDa)

5.61

Isoelectric Point (pI)

40.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	3 - 449	4.2e-78	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca	FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica	MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica	Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis	pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis	RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata	RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora	Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii	Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa	Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha	Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana	Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	305, 800
AccI	GTMKAC	1 cut(s)	896
AccII	CGCG	1 cut(s)	1168
AciI	CCGC	6 cut(s)	720, 723, 859, 1025, 1166, 1168
AclWI	GGATC	3 cut(s)	96, 178, 532
AcoI	YGGCCR	3 cut(s)	241, 1329, 1350
AcsI	RAATTY	4 cut(s)	603, 635, 669, 746
AcuI	CTGAAG	1 cut(s)	963
AfaI	GTAC	5 cut(s)	167, 459, 586, 950, 1181
AfiI	CCNNNNNNNGG	3 cut(s)	217, 239, 373
AflII	CTTAAG	1 cut(s)	913
AflIII	ACRYGT	1 cut(s)	7
AgsI	TTSAA	7 cut(s)	38, 424, 547, 824, 874, 1174, 1295
AhlI	ACTAGT	1 cut(s)	581
AjnI	CCWGG	1 cut(s)	1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	111, 143
AloI	GAACNNNNNNTCC	6 cut(s)	80, 112, 948, 980, 1328, 1360
AluBI	AGCT	5 cut(s)	180, 472, 1161, 1298, 1356
AluI	AGCT	5 cut(s)	180, 472, 1161, 1298, 1356
Alw21I	GWGCWC	1 cut(s)	1011
Alw26I	GTCTC	1 cut(s)	881
AlwI	GGATC	3 cut(s)	96, 178, 532
AlwNI	CAGNNNCTG	1 cut(s)	1318
Ama87I	CYCGRG	1 cut(s)	1004
AoxI	GGCC	5 cut(s)	124, 241, 1205, 1329, 1350
ApeKI	GCWGC	1 cut(s)	15
ApoI	RAATTY	4 cut(s)	603, 635, 669, 746
ArsI	GACNNNNNNTTYG	2 cut(s)	689, 721
AspS9I	GGNCC	1 cut(s)	124
AsuHPI	GGTGA	4 cut(s)	247, 271, 1084, 1155
AsuII	TTCGAA	2 cut(s)	667, 752
AvaI	CYCGRG	1 cut(s)	1004
BaeGI	GKGCMC	1 cut(s)	803
BalI	TGGCCA	1 cut(s)	1352
BanI	GGYRCC	2 cut(s)	305, 800
BanII	GRGCYC	1 cut(s)	316
BbsI	GAAGAC	2 cut(s)	273, 699
Bbv12I	GWGCWC	1 cut(s)	1011
BbvCI	CCTCAGC	1 cut(s)	1242
BbvI	GCAGC	1 cut(s)	2
BccI	CCATC	7 cut(s)	260, 332, 473, 515, 738, 790, 1271
BceAI	ACGGC	4 cut(s)	228, 615, 661, 993
BciT130I	CCWGG	1 cut(s)	1266
BcoDI	GTCTC	1 cut(s)	881
BcuI	ACTAGT	1 cut(s)	581
BfaI	CTAG	2 cut(s)	582, 1016
BfmI	CTRYAG	1 cut(s)	92
BfrI	CTTAAG	1 cut(s)	913
BglII	AGATCT	1 cut(s)	810
BisI	GCNGC	3 cut(s)	16, 723, 1026
BlsI	GCNGC	3 cut(s)	17, 724, 1027
BmcAI	AGTACT	1 cut(s)	586
Bme1390I	CCNGG	1 cut(s)	1266
BmeT110I	CYCGRG	1 cut(s)	1004
BmgT120I	GGNCC	1 cut(s)	124
BmiI	GGNNCC	5 cut(s)	307, 313, 378, 802, 1263
BmrFI	CCNGG	1 cut(s)	1266
BmrI	ACTGGG	1 cut(s)	375
BmsI	GCATC	2 cut(s)	27, 657
BmuI	ACTGGG	1 cut(s)	375
BpiI	GAAGAC	2 cut(s)	273, 699
Bpu10I	CCTNAGC	1 cut(s)	1242
Bpu14I	TTCGAA	2 cut(s)	667, 752
Bsa29I	ATCGAT	1 cut(s)	996
BsaBI	GATNNNNATC	1 cut(s)	928
BsaI	GGTCTC	1 cut(s)	881
BsaJI	CCNNGG	5 cut(s)	83, 952, 1166, 1265, 1332
BsaWI	WCCGGW	2 cut(s)	308, 661
BsaXI	ACNNNNNCTCC	4 cut(s)	266, 296, 1246, 1276
Bsc4I	CCNNNNNNNGG	3 cut(s)	217, 239, 373
Bse118I	RCCGGY	1 cut(s)	239
Bse1I	ACTGG	2 cut(s)	222, 381
Bse3DI	GCAATG	1 cut(s)	307
Bse8I	GATNNNNATC	1 cut(s)	928
BseBI	CCWGG	1 cut(s)	1266
BseCI	ATCGAT	1 cut(s)	996
BseDI	CCNNGG	5 cut(s)	83, 952, 1166, 1265, 1332
BseGI	GGATG	4 cut(s)	99, 815, 983, 1229
BseJI	GATNNNNATC	1 cut(s)	928
BseLI	CCNNNNNNNGG	3 cut(s)	217, 239, 373
BseMI	GCAATG	1 cut(s)	307
BseMII	CTCAG	5 cut(s)	77, 459, 783, 1233, 1325
BseNI	ACTGG	2 cut(s)	222, 381
BseRI	GAGGAG	1 cut(s)	606
BseSI	GKGCMC	1 cut(s)	803
BseX3I	CGGCCG	1 cut(s)	241
BseXI	GCAGC	1 cut(s)	2
BseYI	CCCAGC	1 cut(s)	1020
Bsh1236I	CGCG	1 cut(s)	1168
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	5 cut(s)	126, 243, 1207, 1331, 1352
BshNI	GGYRCC	2 cut(s)	305, 800
BshVI	ATCGAT	1 cut(s)	996
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	1011
BsiHKCI	CYCGRG	1 cut(s)	1004
BsiSI	CCGG	3 cut(s)	240, 309, 662
BslFI	GGGAC	2 cut(s)	18, 1165
BslI	CCNNNNNNNGG	3 cut(s)	217, 239, 373
BsmAI	GTCTC	1 cut(s)	881
BsmFI	GGGAC	2 cut(s)	18, 1165
BsnI	GGCC	5 cut(s)	126, 243, 1207, 1331, 1352
Bso31I	GGTCTC	1 cut(s)	881
BsoBI	CYCGRG	1 cut(s)	1004
Bsp119I	TTCGAA	2 cut(s)	667, 752
Bsp1286I	GDGCHC	3 cut(s)	316, 803, 1011
Bsp143I	GATC	5 cut(s)	88, 183, 524, 810, 993
Bsp19I	CCATGG	1 cut(s)	83
BspACI	CCGC	6 cut(s)	720, 723, 859, 1025, 1166, 1168
BspANI	GGCC	5 cut(s)	126, 243, 1207, 1331, 1352
BspCNI	CTCAG	5 cut(s)	76, 460, 784, 1234, 1324
BspDI	ATCGAT	1 cut(s)	996
BspFNI	CGCG	1 cut(s)	1168
BspLI	GGNNCC	5 cut(s)	307, 313, 378, 802, 1263
BspMAI	CTGCAG	1 cut(s)	96
BspPI	GGATC	3 cut(s)	96, 178, 532
BspT104I	TTCGAA	2 cut(s)	667, 752
BspT107I	GGYRCC	2 cut(s)	305, 800
BspTI	CTTAAG	1 cut(s)	913
BspTNI	GGTCTC	1 cut(s)	881
BsrDI	GCAATG	1 cut(s)	307
BsrFI	RCCGGY	1 cut(s)	239
BsrI	ACTGG	2 cut(s)	222, 381
BssAI	RCCGGY	1 cut(s)	239
BssECI	CCNNGG	5 cut(s)	83, 952, 1166, 1265, 1332
BssMI	GATC	5 cut(s)	88, 183, 524, 810, 993
BssNAI	GTATAC	1 cut(s)	897
BssT1I	CCWWGG	1 cut(s)	83
Bst1107I	GTATAC	1 cut(s)	897
Bst2UI	CCWGG	1 cut(s)	1266
Bst4CI	ACNGT	6 cut(s)	34, 349, 991, 1113, 1184, 1258
Bst6I	CTCTTC	2 cut(s)	137, 939
BstAFI	CTTAAG	1 cut(s)	913
BstBI	TTCGAA	2 cut(s)	667, 752
BstC8I	GCNNGC	5 cut(s)	241, 453, 573, 1135, 1354
BstDEI	CTNAG	6 cut(s)	63, 468, 792, 807, 1242, 1311
BstDSI	CCRYGG	2 cut(s)	83, 1166
BstF5I	GGATG	4 cut(s)	99, 815, 983, 1229
BstFNI	CGCG	1 cut(s)	1168
BstKTI	GATC	5 cut(s)	91, 186, 527, 813, 996
BstMAI	GTCTC	1 cut(s)	881
BstMBI	GATC	5 cut(s)	88, 183, 524, 810, 993
BstMCI	CGRYCG	1 cut(s)	244
BstMWI	GCNNNNNNNGC	3 cut(s)	833, 1268, 1337
BstNI	CCWGG	1 cut(s)	1266
BstNSI	RCATGY	1 cut(s)	575
BstSCI	CCNGG	1 cut(s)	1264
BstSFI	CTRYAG	1 cut(s)	92
BstSLI	GKGCMC	1 cut(s)	803
BstUI	CGCG	1 cut(s)	1168
BstV1I	GCAGC	1 cut(s)	2
BstV2I	GAAGAC	2 cut(s)	273, 699
BstX2I	RGATCY	2 cut(s)	88, 810
BstYI	RGATCY	2 cut(s)	88, 810
BstZ17I	GTATAC	1 cut(s)	897
BstZI	CGGCCG	1 cut(s)	241
Bsu15I	ATCGAT	1 cut(s)	996
BsuRI	GGCC	5 cut(s)	126, 243, 1207, 1331, 1352
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	2 cut(s)	83, 1166
BtsCI	GGATG	4 cut(s)	99, 815, 983, 1229
BtsI	GCAGTG	1 cut(s)	1316
BtsIMutI	CAGTG	5 cut(s)	30, 215, 388, 1263, 1316
Cac8I	GCNNGC	5 cut(s)	241, 453, 573, 1135, 1354
CaiI	CAGNNNCTG	1 cut(s)	1318
Cfr10I	RCCGGY	1 cut(s)	239
Cfr13I	GGNCC	1 cut(s)	124
Cfr42I	CCGCGG	1 cut(s)	1169
ClaI	ATCGAT	1 cut(s)	996
CseI	GACGC	1 cut(s)	1346
Csp6I	GTAC	5 cut(s)	166, 458, 585, 949, 1180
CviAII	CATG	2 cut(s)	84, 572
CviQI	GTAC	5 cut(s)	166, 458, 585, 949, 1180
DdeI	CTNAG	6 cut(s)	63, 468, 792, 807, 1242, 1311
DpnI	GATC	5 cut(s)	90, 185, 526, 812, 995
DpnII	GATC	5 cut(s)	88, 183, 524, 810, 993
DraI	TTTAAA	1 cut(s)	745
EaeI	YGGCCR	3 cut(s)	241, 1329, 1350
EagI	CGGCCG	1 cut(s)	241
Eam1104I	CTCTTC	2 cut(s)	137, 939
EarI	CTCTTC	2 cut(s)	137, 939
EclXI	CGGCCG	1 cut(s)	241
Eco130I	CCWWGG	1 cut(s)	83
Eco147I	AGGCCT	1 cut(s)	1207
Eco24I	GRGCYC	1 cut(s)	316
Eco31I	GGTCTC	1 cut(s)	881
Eco52I	CGGCCG	1 cut(s)	241
Eco57I	CTGAAG	1 cut(s)	963
Eco88I	CYCGRG	1 cut(s)	1004
EcoO109I	RGGNCCY	1 cut(s)	124
EcoRI	GAATTC	1 cut(s)	669
EcoRII	CCWGG	1 cut(s)	1264
EcoT14I	CCWWGG	1 cut(s)	83
EcoT38I	GRGCYC	1 cut(s)	316
ErhI	CCWWGG	1 cut(s)	83
FaeI	CATG	2 cut(s)	87, 575
FalI	AAGNNNNNCTT	2 cut(s)	884, 916
FaqI	GGGAC	2 cut(s)	18, 1165
FatI	CATG	2 cut(s)	83, 571
FauI	CCCGC	1 cut(s)	727
FblI	GTMKAC	1 cut(s)	896
Fnu4HI	GCNGC	3 cut(s)	16, 723, 1026
FokI	GGATG	4 cut(s)	86, 802, 970, 1216
FriOI	GRGCYC	1 cut(s)	316
Fsp4HI	GCNGC	3 cut(s)	16, 723, 1026
FspBI	CTAG	2 cut(s)	582, 1016
GluI	GCNGC	3 cut(s)	16, 723, 1026
GsaI	CCCAGC	1 cut(s)	1024
HaeIII	GGCC	5 cut(s)	126, 243, 1207, 1331, 1352
HapII	CCGG	3 cut(s)	240, 309, 662
HgaI	GACGC	1 cut(s)	1346
Hin1II	CATG	2 cut(s)	87, 575
HincII	GTYRAC	2 cut(s)	78, 1254
HindII	GTYRAC	2 cut(s)	78, 1254
HindIII	AAGCTT	2 cut(s)	178, 1296
HinfI	GANTC	3 cut(s)	56, 924, 1102
HpaI	GTTAAC	1 cut(s)	78
HpaII	CCGG	3 cut(s)	240, 309, 662
HphI	GGTGA	4 cut(s)	247, 271, 1084, 1155
Hpy166II	GTNNAC	5 cut(s)	60, 78, 394, 897, 1254
Hpy188I	TCNGA	4 cut(s)	66, 559, 956, 1314
Hpy188III	TCNNGA	3 cut(s)	362, 694, 1150
Hpy8I	GTNNAC	5 cut(s)	60, 78, 394, 897, 1254
Hpy99I	CGWCG	1 cut(s)	296
HpyAV	CCTTC	5 cut(s)	137, 295, 425, 830, 1197
HpyCH4III	ACNGT	6 cut(s)	34, 349, 991, 1113, 1184, 1258
HpyCH4IV	ACGT	1 cut(s)	9
HpyCH4V	TGCA	7 cut(s)	18, 94, 300, 455, 575, 590, 1321
HpyF10VI	GCNNNNNNNGC	3 cut(s)	833, 1268, 1337
HpyF3I	CTNAG	6 cut(s)	63, 468, 792, 807, 1242, 1311
HpySE526I	ACGT	1 cut(s)	9
Hsp92II	CATG	2 cut(s)	87, 575
KroI	GCCGGC	1 cut(s)	239
KroNI	GCCGGC	1 cut(s)	241
KspAI	GTTAAC	1 cut(s)	78
KspI	CCGCGG	1 cut(s)	1169
Kzo9I	GATC	5 cut(s)	88, 183, 524, 810, 993
LmnI	GCTCC	2 cut(s)	311, 1267
Lsp1109I	GCAGC	1 cut(s)	2
LweI	GCATC	2 cut(s)	27, 657
MaeI	CTAG	2 cut(s)	582, 1016
MaeII	ACGT	1 cut(s)	9
MaeIII	GTNAC	3 cut(s)	343, 383, 463
MalI	GATC	5 cut(s)	90, 185, 526, 812, 995
MboI	GATC	5 cut(s)	88, 183, 524, 810, 993
MboII	GAAGA	7 cut(s)	124, 217, 278, 535, 699, 956, 1286
MflI	RGATCY	2 cut(s)	88, 810
MhlI	GDGCHC	3 cut(s)	316, 803, 1011
MlsI	TGGCCA	1 cut(s)	1352
MluCI	AATT	8 cut(s)	69, 317, 603, 635, 669, 746, 762, 1126
MluNI	TGGCCA	1 cut(s)	1352
MlyI	GAGTC	2 cut(s)	65, 1111
MmeI	TCCRAC	3 cut(s)	211, 1141, 1257
Mox20I	TGGCCA	1 cut(s)	1352
MroNI	GCCGGC	1 cut(s)	239
MscI	TGGCCA	1 cut(s)	1352
MseI	TTAA	4 cut(s)	77, 744, 914, 1218
Msp20I	TGGCCA	1 cut(s)	1352
MspA1I	CMGCKG	1 cut(s)	1168
MspCI	CTTAAG	1 cut(s)	913
MspI	CCGG	3 cut(s)	240, 309, 662
MspR9I	CCNGG	1 cut(s)	1266
MvaI	CCWGG	1 cut(s)	1266
MvnI	CGCG	1 cut(s)	1168
MwoI	GCNNNNNNNGC	3 cut(s)	833, 1268, 1337
NaeI	GCCGGC	1 cut(s)	241
NcoI	CCATGG	1 cut(s)	83
NdeII	GATC	5 cut(s)	88, 183, 524, 810, 993
NgoMIV	GCCGGC	1 cut(s)	239
NlaIII	CATG	2 cut(s)	87, 575
NlaIV	GGNNCC	5 cut(s)	307, 313, 378, 802, 1263
NmeAIII	GCCGAG	2 cut(s)	547, 1357
NmuCI	GTSAC	2 cut(s)	343, 383
NspI	RCATGY	1 cut(s)	575
NspV	TTCGAA	2 cut(s)	667, 752
PaeI	GCATGC	1 cut(s)	575
PaeR7I	CTCGAG	1 cut(s)	1004
PceI	AGGCCT	1 cut(s)	1207
PcsI	WCGNNNNNNNCGW	1 cut(s)	1002
PdiI	GCCGGC	1 cut(s)	241
PfeI	GAWTC	1 cut(s)	924
PkrI	GCNGC	3 cut(s)	17, 724, 1027
PleI	GAGTC	2 cut(s)	64, 1110
PpsI	GAGTC	2 cut(s)	64, 1110
Psp6I	CCWGG	1 cut(s)	1264
PspFI	CCCAGC	1 cut(s)	1020
PspGI	CCWGG	1 cut(s)	1264
PspN4I	GGNNCC	5 cut(s)	307, 313, 378, 802, 1263
PspPI	GGNCC	1 cut(s)	124
PspXI	VCTCGAGB	1 cut(s)	1004
PstI	CTGCAG	1 cut(s)	96
PstNI	CAGNNNCTG	1 cut(s)	1318
PsuI	RGATCY	2 cut(s)	88, 810
RsaI	GTAC	5 cut(s)	167, 459, 586, 950, 1181
RsaNI	GTAC	5 cut(s)	166, 458, 585, 949, 1180
SacII	CCGCGG	1 cut(s)	1169
SaqAI	TTAA	4 cut(s)	77, 744, 914, 1218
SatI	GCNGC	3 cut(s)	16, 723, 1026
Sau3AI	GATC	5 cut(s)	88, 183, 524, 810, 993
Sau96I	GGNCC	1 cut(s)	124
ScaI	AGTACT	1 cut(s)	586
SchI	GAGTC	2 cut(s)	65, 1111
ScrFI	CCNGG	1 cut(s)	1266
SduI	GDGCHC	3 cut(s)	316, 803, 1011
SfaNI	GCATC	2 cut(s)	27, 657
SfcI	CTRYAG	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	1004
Sfr303I	CCGCGG	1 cut(s)	1169
SfuI	TTCGAA	2 cut(s)	667, 752
SgrBI	CCGCGG	1 cut(s)	1169
SlaI	CTCGAG	1 cut(s)	1004
SmiI	ATTTAAAT	1 cut(s)	745
SmlI	CTYRAG	2 cut(s)	913, 1004
SmoI	CTYRAG	2 cut(s)	913, 1004
SpeI	ACTAGT	1 cut(s)	581
SphI	GCATGC	1 cut(s)	575
Sse9I	AATT	8 cut(s)	69, 317, 603, 635, 669, 746, 762, 1126
SseBI	AGGCCT	1 cut(s)	1207
SsiI	CCGC	6 cut(s)	720, 723, 859, 1025, 1166, 1168
SspI	AATATT	1 cut(s)	741
SspMI	CTAG	2 cut(s)	582, 1016
StuI	AGGCCT	1 cut(s)	1207
StyD4I	CCNGG	1 cut(s)	1264
StyI	CCWWGG	1 cut(s)	83
SwaI	ATTTAAAT	1 cut(s)	745
TaaI	ACNGT	6 cut(s)	34, 349, 991, 1113, 1184, 1258
TaiI	ACGT	1 cut(s)	12
TaqI	TCGA	5 cut(s)	294, 667, 752, 996, 1005
TasI	AATT	8 cut(s)	69, 317, 603, 635, 669, 746, 762, 1126
TatI	WGTACW	2 cut(s)	457, 584
TauI	GCSGC	2 cut(s)	725, 1028
TfiI	GAWTC	1 cut(s)	924
Tru1I	TTAA	4 cut(s)	77, 744, 914, 1218
Tru9I	TTAA	4 cut(s)	77, 744, 914, 1218
TscAI	CASTG	5 cut(s)	37, 222, 388, 1263, 1323
TseFI	GTSAC	2 cut(s)	343, 383
TseI	GCWGC	1 cut(s)	15
Tsp45I	GTSAC	2 cut(s)	343, 383
TspDTI	ATGAA	6 cut(s)	88, 279, 425, 444, 478, 518
TspGWI	ACGGA	2 cut(s)	280, 1026
TspRI	CASTG	5 cut(s)	37, 222, 388, 1263, 1323
Vha464I	CTTAAG	1 cut(s)	913
XapI	RAATTY	4 cut(s)	603, 635, 669, 746
XceI	RCATGY	1 cut(s)	575
XcmI	CCANNNNNNNNNTGG	1 cut(s)	793
XhoI	CTCGAG	1 cut(s)	1004
XmiI	GTMKAC	1 cut(s)	896
XspI	CTAG	2 cut(s)	582, 1016
ZrmI	AGTACT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.