Rorug02G0133000

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
11500860 .. 11502121
1262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0133000.1

Sequence Viewer

Length: 1083 bp
ATGGCTCGCCCGGCTAAGAAGGAGGTGGAGGCTAAGAAGAAGCCGGTTGTGGTGGAGGTGAAAACCCAAGAGAAGCCCTCACCACAACCCTCTCCTGCTCCTCAAAAACCCTTATCGTCGGCTGCCCTGGCCAATGCCTTTGATCTGTTGGATGAGGACTCTTCAGATCTCATCAGCATCGTCGATGCGAAAGAAGATGATGCTTTTGTAGCAGCAGAGATAAAGAGGATCGAGGAGGAGAAGAAGGCAGCGGGGGAATCCAAGATTAAGGCCAGGGAGGAGGAGAAGAAGGCCGCGAGAGAGGCTAAGAAGAGGGCTATCCAAGAGAAGAAGGTTTATGAAGCCTCGATTCTCAGGTTCCACAGCGCTCGTCCTAATCTTAGTTTTTCCAGACCATCTGCTTTGGCTAGTGATGGTGTGCAGTCCCAATTAGCCAAGAACCTGAGCGGGTTGGAGTTGCAGGCGAAGGAGAGTCAAGGTGCTCCTGTGGAACAGGAGGCTGCTAGTGTTGATGGAAGCAGCAGCAAGAGTTCTGATGGGAGGAGGAGAGCAAATATGAATGGAAGCTTGCGGCGAAAACAGAAGAAGAAGAAGGCTGAAGGAGAGAAAAAGGAGGGAAAGGATCAACAGGAAAAGCAAGACAGCAACAATGGTGCTCCTGTTGTGAATAGCAACTATCCTCGTTCTTACACTTTGAAAGAATATGAGGAGAAGAAGAAGAAGAGAGAAGAAGATGAGAAGAACAAAAAAGCCGATGCCATCAATAATGGGATGGATCATAGACAACAGAAGTTTGACAATGGTGGGCCGAGGAGGTTTGCCAATGGTGGACCGAGGAGGTTTAACAATGGAGGGCAAAGATTTGATAAACAGCAAGCCCTTGCAGAAGAAGCTCTTGTAAAAGAAGATGCTTCATTTAGCTTGGAGGATGCTGATTTTCCGGTTCTTGAAAAACAGGTCCCTGCAGTAAAAGCCCCTGCCGAAGAAGTTGTTGCCGGAAAAGCTGTTGTAGCAAAAGCCCCTACAGGAAAAACTGTTGCAGGAAAAGCTGTGGCAAAAAAATCTGGTGCAAAGAAAGCCTAA

Protein Analysis

360

Amino Acids

39.26

Weight (kDa)

9.55

Isoelectric Point (pI)

59.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 447
AccII CGCG 1 cut(s) 296
AciI CCGC 4 cut(s) 251, 294, 447, 571
AclWI GGATC 3 cut(s) 236, 630, 783
AcoI YGGCCR 1 cut(s) 129
AcuI CTGAAG 2 cut(s) 147, 618
AfeI AGCGCT 1 cut(s) 367
AgsI TTSAA 2 cut(s) 697, 950
AjnI CCWGG 2 cut(s) 126, 272
AluBI AGCT 5 cut(s) 567, 893, 921, 1004, 1049
AluI AGCT 5 cut(s) 567, 893, 921, 1004, 1049
Alw21I GWGCWC 2 cut(s) 484, 658
AlwI GGATC 3 cut(s) 236, 630, 783
Aor51HI AGCGCT 1 cut(s) 367
AoxI GGCC 4 cut(s) 129, 270, 291, 806
ApeKI GCWGC 6 cut(s) 122, 212, 248, 500, 519, 522
AspLEI GCGC 1 cut(s) 368
AspS9I GGNCC 3 cut(s) 806, 830, 958
AsuC2I CCSGG 1 cut(s) 11
AsuHPI GGTGA 2 cut(s) 70, 72
AvaII GGWCC 2 cut(s) 830, 958
BalI TGGCCA 1 cut(s) 131
Bbv12I GWGCWC 2 cut(s) 484, 658
BbvI GCAGC 6 cut(s) 109, 224, 260, 487, 531, 534
BccI CCATC 6 cut(s) 403, 407, 506, 530, 766, 767
BciT130I CCWGG 2 cut(s) 128, 274
BcnI CCSGG 1 cut(s) 11
BfaI CTAG 2 cut(s) 408, 504
BfmI CTRYAG 2 cut(s) 963, 1023
BfoI RGCGCY 1 cut(s) 369
BglII AGATCT 1 cut(s) 166
BisI GCNGC 8 cut(s) 123, 213, 249, 294, 501, 520, 523, 572
BlsI GCNGC 8 cut(s) 124, 214, 250, 295, 502, 521, 524, 573
Bme1390I CCNGG 3 cut(s) 11, 128, 274
Bme18I GGWCC 2 cut(s) 830, 958
BmgT120I GGNCC 3 cut(s) 806, 830, 958
BmiI GGNNCC 2 cut(s) 359, 960
BmrFI CCNGG 3 cut(s) 11, 128, 274
BmsI GCATC 6 cut(s) 175, 186, 190, 745, 898, 919
BplI GAGNNNNNCTC 2 cut(s) 62, 94
Bpu10I CCTNAGC 1 cut(s) 443
BpuMI CCSGG 1 cut(s) 11
BsaJI CCNNGG 4 cut(s) 126, 273, 809, 833
BsaWI WCCGGW 1 cut(s) 940
Bse118I RCCGGY 1 cut(s) 43
BseBI CCWGG 2 cut(s) 128, 274
BseDI CCNNGG 4 cut(s) 126, 273, 809, 833
BseGI GGATG 3 cut(s) 157, 777, 934
BseMII CTCAG 2 cut(s) 367, 434
BseXI GCAGC 6 cut(s) 109, 224, 260, 487, 531, 534
BsgI GTGCAG 1 cut(s) 440
Bsh1236I CGCG 1 cut(s) 296
BshFI GGCC 4 cut(s) 131, 272, 293, 808
BsiHKAI GWGCWC 2 cut(s) 484, 658
BsiSI CCGG 4 cut(s) 11, 44, 941, 996
BslFI GGGAC 2 cut(s) 409, 944
BsmFI GGGAC 2 cut(s) 409, 944
BsnI GGCC 4 cut(s) 131, 272, 293, 808
Bsp1286I GDGCHC 2 cut(s) 484, 658
Bsp143I GATC 5 cut(s) 142, 166, 228, 622, 775
BspACI CCGC 4 cut(s) 251, 294, 447, 571
BspANI GGCC 4 cut(s) 131, 272, 293, 808
BspCNI CTCAG 2 cut(s) 366, 435
BspFNI CGCG 1 cut(s) 296
BspLI GGNNCC 2 cut(s) 359, 960
BspMAI CTGCAG 1 cut(s) 967
BspPI GGATC 3 cut(s) 236, 630, 783
BsrBI CCGCTC 1 cut(s) 447
BsrFI RCCGGY 1 cut(s) 43
BssAI RCCGGY 1 cut(s) 43
BssECI CCNNGG 4 cut(s) 126, 273, 809, 833
BssMI GATC 5 cut(s) 142, 166, 228, 622, 775
Bst2UI CCWGG 2 cut(s) 128, 274
Bst4CI ACNGT 1 cut(s) 1036
Bst6I CTCTTC 3 cut(s) 166, 305, 716
BstC8I GCNNGC 4 cut(s) 7, 462, 569, 876
BstDEI CTNAG 6 cut(s) 15, 33, 306, 353, 380, 443
BstF5I GGATG 3 cut(s) 157, 777, 934
BstFNI CGCG 1 cut(s) 296
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 1 cut(s) 368
BstKTI GATC 5 cut(s) 145, 169, 231, 625, 778
BstMBI GATC 5 cut(s) 142, 166, 228, 622, 775
BstNI CCWGG 2 cut(s) 128, 274
BstSCI CCNGG 3 cut(s) 9, 126, 272
BstSFI CTRYAG 2 cut(s) 963, 1023
BstUI CGCG 1 cut(s) 296
BstV1I GCAGC 6 cut(s) 109, 224, 260, 487, 531, 534
BstX2I RGATCY 1 cut(s) 166
BstYI RGATCY 1 cut(s) 166
BsuRI GGCC 4 cut(s) 131, 272, 293, 808
BtsCI GGATG 3 cut(s) 157, 777, 934
Cac8I GCNNGC 4 cut(s) 7, 462, 569, 876
CfoI GCGC 1 cut(s) 368
Cfr10I RCCGGY 1 cut(s) 43
Cfr13I GGNCC 3 cut(s) 806, 830, 958
DdeI CTNAG 6 cut(s) 15, 33, 306, 353, 380, 443
DpnI GATC 5 cut(s) 144, 168, 230, 624, 777
DpnII GATC 5 cut(s) 142, 166, 228, 622, 775
EaeI YGGCCR 1 cut(s) 129
Eam1104I CTCTTC 3 cut(s) 166, 305, 716
EarI CTCTTC 3 cut(s) 166, 305, 716
Eco47I GGWCC 2 cut(s) 830, 958
Eco47III AGCGCT 1 cut(s) 367
Eco57I CTGAAG 2 cut(s) 147, 618
EcoO109I RGGNCCY 1 cut(s) 958
EcoRII CCWGG 2 cut(s) 126, 272
FaiI YATR 4 cut(s) 339, 557, 705, 780
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 2 cut(s) 409, 944
FauI CCCGC 2 cut(s) 244, 440
Fnu4HI GCNGC 8 cut(s) 123, 213, 249, 294, 501, 520, 523, 572
FokI GGATG 3 cut(s) 164, 784, 941
Fsp4HI GCNGC 8 cut(s) 123, 213, 249, 294, 501, 520, 523, 572
FspBI CTAG 2 cut(s) 408, 504
GlaI GCGC 1 cut(s) 367
GluI GCNGC 8 cut(s) 123, 213, 249, 294, 501, 520, 523, 572
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 4 cut(s) 131, 272, 293, 808
HapII CCGG 4 cut(s) 11, 44, 941, 996
HhaI GCGC 1 cut(s) 368
Hin6I GCGC 1 cut(s) 366
HinP1I GCGC 1 cut(s) 366
HindIII AAGCTT 1 cut(s) 565
HinfI GANTC 4 cut(s) 158, 257, 349, 472
HpaII CCGG 4 cut(s) 11, 44, 941, 996
HphI GGTGA 2 cut(s) 70, 72
Hpy166II GTNNAC 1 cut(s) 830
Hpy188I TCNGA 2 cut(s) 166, 535
Hpy188III TCNNGA 2 cut(s) 390, 947
Hpy8I GTNNAC 1 cut(s) 830
Hpy99I CGWCG 2 cut(s) 121, 185
HpyAV CCTTC 7 cut(s) 13, 238, 283, 325, 460, 586, 593
HpyCH4III ACNGT 1 cut(s) 1036
HpyCH4V TGCA 6 cut(s) 421, 460, 884, 965, 1040, 1070
HpyF3I CTNAG 6 cut(s) 15, 33, 306, 353, 380, 443
HspAI GCGC 1 cut(s) 366
Kzo9I GATC 5 cut(s) 142, 166, 228, 622, 775
LmnI GCTCC 3 cut(s) 103, 487, 661
Lsp1109I GCAGC 6 cut(s) 109, 224, 260, 487, 531, 534
LweI GCATC 6 cut(s) 175, 186, 190, 745, 898, 919
MaeI CTAG 2 cut(s) 408, 504
MalI GATC 5 cut(s) 144, 168, 230, 624, 777
MbiI CCGCTC 1 cut(s) 447
MboI GATC 5 cut(s) 142, 166, 228, 622, 775
MflI RGATCY 1 cut(s) 166
MhlI GDGCHC 2 cut(s) 484, 658
MlsI TGGCCA 1 cut(s) 131
MluCI AATT 1 cut(s) 428
MluNI TGGCCA 1 cut(s) 131
MlyI GAGTC 2 cut(s) 152, 481
MmeI TCCRAC 2 cut(s) 129, 432
Mox20I TGGCCA 1 cut(s) 131
MscI TGGCCA 1 cut(s) 131
MseI TTAA 2 cut(s) 267, 843
Msp20I TGGCCA 1 cut(s) 131
MspA1I CMGCKG 1 cut(s) 251
MspI CCGG 4 cut(s) 11, 44, 941, 996
MspR9I CCNGG 3 cut(s) 11, 128, 274
MvaI CCWGG 2 cut(s) 128, 274
MvnI CGCG 1 cut(s) 296
NciI CCSGG 1 cut(s) 11
NdeII GATC 5 cut(s) 142, 166, 228, 622, 775
NlaIV GGNNCC 2 cut(s) 359, 960
NmeAIII GCCGAG 1 cut(s) 834
PfeI GAWTC 2 cut(s) 257, 349
PkrI GCNGC 8 cut(s) 124, 214, 250, 295, 502, 521, 524, 573
PleI GAGTC 2 cut(s) 152, 480
PpsI GAGTC 2 cut(s) 152, 480
PpuMI RGGWCCY 1 cut(s) 958
Psp5II RGGWCCY 1 cut(s) 958
Psp6I CCWGG 2 cut(s) 126, 272
PspGI CCWGG 2 cut(s) 126, 272
PspN4I GGNNCC 2 cut(s) 359, 960
PspPI GGNCC 3 cut(s) 806, 830, 958
PspPPI RGGWCCY 1 cut(s) 958
PstI CTGCAG 1 cut(s) 967
PsuI RGATCY 1 cut(s) 166
SaqAI TTAA 2 cut(s) 267, 843
SatI GCNGC 8 cut(s) 123, 213, 249, 294, 501, 520, 523, 572
Sau3AI GATC 5 cut(s) 142, 166, 228, 622, 775
Sau96I GGNCC 3 cut(s) 806, 830, 958
SchI GAGTC 2 cut(s) 152, 481
ScrFI CCNGG 3 cut(s) 11, 128, 274
SduI GDGCHC 2 cut(s) 484, 658
SfaNI GCATC 6 cut(s) 175, 186, 190, 745, 898, 919
SfcI CTRYAG 2 cut(s) 963, 1023
SinI GGWCC 2 cut(s) 830, 958
Sse9I AATT 1 cut(s) 428
SsiI CCGC 4 cut(s) 251, 294, 447, 571
SspMI CTAG 2 cut(s) 408, 504
StyD4I CCNGG 3 cut(s) 9, 126, 272
TaaI ACNGT 1 cut(s) 1036
TaqI TCGA 3 cut(s) 183, 231, 347
TaqII GACCGA 1 cut(s) 847
TasI AATT 1 cut(s) 428
TauI GCSGC 2 cut(s) 296, 574
TfiI GAWTC 2 cut(s) 257, 349
Tru1I TTAA 2 cut(s) 267, 843
Tru9I TTAA 2 cut(s) 267, 843
TseI GCWGC 6 cut(s) 122, 212, 248, 500, 519, 522
TspDTI ATGAA 3 cut(s) 354, 572, 903
VpaK11BI GGWCC 2 cut(s) 830, 958
XspI CTAG 2 cut(s) 408, 504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.