Rroxscaffold_2G00137630

acetyltransferase At3g50280-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
75503113 .. 75504312
1200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00137630.1

Sequence Viewer

Length: 1200 bp
ATGTCTCAAATTCGGCAAATCTCTACTAGTATCGTCCGTCCAACTTGTGAGAATGATGAGTTAACTCATAGAGTCGAGTTAAGTCCTTGGGATCTTCGACTCCTTAAACTTGAGTACATCCAAAAAGGGCTTCTCTTCCCAAAGCTAGCAGAGAAAGAAGTAGACCAGAGCTTGATACAACACCTAAAAGTTTGCCTTTCTCGCACTTTGAATATCTTGTACCCACTAGCAGGTCGCTTATCCCAGATTGAAAACGAAGATGGCACCACTTGCTTTTTCATCAACTGTAACAGCGCAGGAGCCCAATTTGTTCATGCAGCTCATGATGGTGTCAGAGTGGCTGATATTCTTGACCCTGTTTACATTCCTGGTGAGATTATCGAAAACCTATTTTCTATGAATTCAGTTCTGAACTATGAAGGCACTTCAAAACCATTGCTTGCAGTGCAAATCACTGAGCTTGCGGATGGCATATTTATTGGTTGCAGCATAAACCATGTGGTTGCAGATGGCACCTCTTTCTGGCATTTCTGTAATACTTGGTCTCACATCTCTCGTTCTGGCTCTGATGATACAGTTTCTCAAATTAGTCCTGATTTTGGTCGTCATTTTCTTGATGGCCTAATTGATCTCCCAGTTCGCATACCGTTTTCCCAAATTCAAATCCCGGAGACACTTATTCAACAGACACCTTCTTCAACTCTTTTACAAAGGGTGTTTCATTTTCCCAAAGAAAAAGTTGCGCAGCTCAAAGCAAAGGCTAATGCTGAGATGGGTAAAAATAACATCTCGTCCCTTCAGGCACTCATGGCTCATCTTTGGAGAGCCACAACACGTGGAAGAAGTGATGTCAAATCCGATGAAGAGACTACTTACCGGATTGCAATCGGGTTGAGGCAAAAATTGAAGCCACCATTGCCAAATCTCTACATGGGGAATGCACTTCGAGGAGTTTCTACCCACTCCACTGCAAGTGATCTGCTACAACACGGACTAGGATGGGCCGCTTTGAAAATCAACAAAGCGATTGCTTCCATGACACCTGAAGATGTGACAAAAGAATTGGAGGACTGGGTAAAGGCCCCTATCGTACGTCCAAGTTTAAGGGCTCCAACAAGAGTTCACAGCTTGCTCACAGGAAGCTCACCGCGGTTCAATGTGTATGGTAATGATTTTGGTTGGGGAGACCGCTTGCTGTGA

Protein Analysis

399

Amino Acids

44.49

Weight (kDa)

6.9

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 6 - 396 3.1e-74 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000375)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50270 AT3G50280 AT3G50280 AT3G50290 AT3G50300 AT5G38130 AT5G67150
fragaria_vesca FvH4_1g16271 FvH4_1g16300 FvH4_1g16301 FvH4_1g16304 FvH4_1g16321
malus_domestica MD02G1175300.v1.1 MD02G1175400.v1.1 MD02G1175500.v1.1 MD02G1175700.v1.1 MD03G1116500.v1.1 MD04G1188300.v1.1 MD08G1137000.v1.1 MD15G1286000.v1.1 MD15G1286100.v1.1 MD15G1286200.v1.1 MD17G1197100.v1.1
prunus_persica Prupe.7G129900_v2.0.a1 Prupe.7G130000_v2.0.a1 Prupe.7G130100_v2.0.a1 Prupe.7G130200_v2.0.a1 Prupe.7G130300_v2.0.a1 Prupe.7G130400_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130500_v2.0.a1 Prupe.7G130600_v2.0.a1 Prupe.7G130700_v2.0.a1 Prupe.7G130800_v2.0.a1
pyrus_communis pycom02g14140 pycom02g14150 pycom15g24910 pycom17g20220
rosa_chinensis RchiOBHm_Chr2g0105981 RchiOBHm_Chr2g0106021 RchiOBHm_Chr2g0106071 RchiOBHm_Chr2g0106091 RchiOBHm_Chr2g0106111 RchiOBHm_Chr2g0106181 RchiOBHm_Chr2g0106441
rosa_laevigata RLG00000000204 RLG00000000206 RLG00000000207 RLG00000000208 RLG00000017475 RLG00000017476 RLG00000017477 RLG00000017479 RLG00000017498
rosa_multiflora Rmu_co8282453.1_g000001 Rmu_sc0000444.1_g000002 Rmu_sc0000608.1_g000005 Rmu_sc0004015.1_g000005 Rmu_sc0008303.1_g000013 Rmu_sc0009027.1_g000012 Rmu_sc0010662.1_g000004 Rmu_sc0014348.1_g000011
rosa_roxburghii Rroxscaffold_2G00137180 Rroxscaffold_2G00137400 Rroxscaffold_2G00137420 Rroxscaffold_2G00137440 Rroxscaffold_2G00137460 Rroxscaffold_2G00137490 Rroxscaffold_2G00137610 Rroxscaffold_2G00137630 Rroxscaffold_2G00137650
rosa_rugosa Rorug02G0132900 Rorug02G0133000 Rorug02G0133100 Rorug02G0133200 Rorug02G0135400
rosa_samantha Rh2AG183800 Rh2AG184000 Rh2AG184100 Rh2AG184200 Rh2AG186700 Rh2AG186800 Rh2BG193500 Rh2BG193700 Rh2BG193900 Rh2BG194000 Rh2BG194200 Rh2BG197000 Rh2BG197200 Rh2CG187700 Rh2CG188100 Rh2CG188500 Rh2CG188600 Rh2CG188700 Rh2CG189100 Rh2CG191800 Rh2DG190200 Rh2DG190400 Rh2DG190500 Rh2DG190600 Rh2DG192800 Rh2DG193000
rosa_wichuraiana Rw2G014370 Rw2G014550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 744
Acc36I ACCTGC 1 cut(s) 221
AccB1I GGYRCC 2 cut(s) 263, 512
AccI GTMKAC 1 cut(s) 162
AccII CGCG 1 cut(s) 1150
AciI CCGC 5 cut(s) 464, 1005, 1148, 1150, 1189
AclWI GGATC 1 cut(s) 99
AcsI RAATTY 3 cut(s) 9, 400, 657
AcuI CTGAAG 2 cut(s) 782, 1065
AcvI CACGTG 1 cut(s) 836
AfaI GTAC 3 cut(s) 116, 221, 1092
AfiI CCNNNNNNNGG 3 cut(s) 230, 522, 599
AflIII ACRYGT 1 cut(s) 833
AgsI TTSAA 9 cut(s) 211, 251, 429, 662, 683, 699, 907, 1012, 1156
AhlI ACTAGT 1 cut(s) 26
AjnI CCWGG 1 cut(s) 367
AjuI GAANNNNNNNTTGG 2 cut(s) 114, 146
AluBI AGCT 7 cut(s) 145, 171, 320, 460, 748, 1128, 1143
AluI AGCT 7 cut(s) 145, 171, 320, 460, 748, 1128, 1143
Alw26I GTCTC 5 cut(s) 9, 549, 665, 860, 1179
AlwI GGATC 1 cut(s) 99
AoxI GGCC 3 cut(s) 619, 1002, 1080
ApeKI GCWGC 3 cut(s) 317, 486, 745
ApoI RAATTY 3 cut(s) 9, 400, 657
AspLEI GCGC 2 cut(s) 296, 745
AspS9I GGNCC 2 cut(s) 1002, 1081
AsuC2I CCSGG 1 cut(s) 668
AsuHPI GGTGA 2 cut(s) 383, 1137
AsuNHI GCTAGC 1 cut(s) 145
BanI GGYRCC 2 cut(s) 263, 512
BanII GRGCYC 2 cut(s) 304, 1111
BbrPI CACGTG 1 cut(s) 836
BbvI GCAGC 3 cut(s) 329, 498, 757
BccI CCATC 7 cut(s) 254, 320, 461, 503, 611, 766, 993
BciT130I CCWGG 1 cut(s) 369
BcnI CCSGG 1 cut(s) 668
BcoDI GTCTC 5 cut(s) 9, 549, 665, 860, 1179
BcuI ACTAGT 1 cut(s) 26
BfaI CTAG 4 cut(s) 27, 146, 227, 995
BfuAI ACCTGC 1 cut(s) 221
BisI GCNGC 4 cut(s) 318, 487, 746, 1005
BlsI GCNGC 4 cut(s) 319, 488, 747, 1006
Bme1390I CCNGG 2 cut(s) 369, 668
BmgT120I GGNCC 2 cut(s) 1002, 1081
BmiI GGNNCC 5 cut(s) 265, 301, 514, 1083, 1110
BmrFI CCNGG 2 cut(s) 369, 668
BmrI ACTGGG 2 cut(s) 629, 1081
BmtI GCTAGC 1 cut(s) 149
BmuI ACTGGG 2 cut(s) 629, 1081
BpuEI CTTGAG 1 cut(s) 131
BpuMI CCSGG 1 cut(s) 668
BsaAI YACGTR 1 cut(s) 836
BsaBI GATNNNNATC 1 cut(s) 884
BsaI GGTCTC 2 cut(s) 549, 1179
BsaJI CCNNGG 2 cut(s) 86, 1148
BsaWI WCCGGW 1 cut(s) 876
Bsc4I CCNNNNNNNGG 3 cut(s) 230, 522, 599
Bse1I ACTGG 2 cut(s) 635, 1076
Bse3DI GCAATG 2 cut(s) 434, 914
Bse8I GATNNNNATC 1 cut(s) 884
BseBI CCWGG 1 cut(s) 369
BseDI CCNNGG 2 cut(s) 86, 1148
BseGI GGATG 3 cut(s) 117, 472, 1004
BseJI GATNNNNATC 1 cut(s) 884
BseLI CCNNNNNNNGG 3 cut(s) 230, 522, 599
BseMI GCAATG 2 cut(s) 434, 914
BseMII CTCAG 2 cut(s) 447, 759
BseNI ACTGG 2 cut(s) 635, 1076
BseRI GAGGAG 1 cut(s) 963
BseXI GCAGC 3 cut(s) 329, 498, 757
Bsh1236I CGCG 1 cut(s) 1150
BshFI GGCC 3 cut(s) 621, 1004, 1082
BshNI GGYRCC 2 cut(s) 263, 512
BsiSI CCGG 2 cut(s) 668, 877
BsiWI CGTACG 1 cut(s) 1090
BslFI GGGAC 1 cut(s) 778
BslI CCNNNNNNNGG 3 cut(s) 230, 522, 599
BsmAI GTCTC 5 cut(s) 9, 549, 665, 860, 1179
BsmFI GGGAC 1 cut(s) 778
BsmI GAATGC 1 cut(s) 943
BsnI GGCC 3 cut(s) 621, 1004, 1082
Bso31I GGTCTC 2 cut(s) 549, 1179
Bsp1286I GDGCHC 2 cut(s) 304, 1111
Bsp143I GATC 3 cut(s) 91, 628, 976
BspACI CCGC 5 cut(s) 464, 1005, 1148, 1150, 1189
BspANI GGCC 3 cut(s) 621, 1004, 1082
BspCNI CTCAG 2 cut(s) 448, 760
BspFNI CGCG 1 cut(s) 1150
BspHI TCATGA 1 cut(s) 322
BspLI GGNNCC 5 cut(s) 265, 301, 514, 1083, 1110
BspMI ACCTGC 1 cut(s) 221
BspOI GCTAGC 1 cut(s) 149
BspPI GGATC 1 cut(s) 99
BspT107I GGYRCC 2 cut(s) 263, 512
BspTNI GGTCTC 2 cut(s) 549, 1179
BsrDI GCAATG 2 cut(s) 434, 914
BsrI ACTGG 2 cut(s) 635, 1076
BssECI CCNNGG 2 cut(s) 86, 1148
BssMI GATC 3 cut(s) 91, 628, 976
BssT1I CCWWGG 1 cut(s) 86
Bst2UI CCWGG 1 cut(s) 369
Bst4CI ACNGT 3 cut(s) 287, 577, 648
Bst6I CTCTTC 2 cut(s) 140, 858
BstAPI GCANNNNNTGC 1 cut(s) 270
BstBAI YACGTR 1 cut(s) 836
BstC8I GCNNGC 5 cut(s) 147, 441, 462, 1130, 1193
BstDEI CTNAG 2 cut(s) 456, 768
BstDSI CCRYGG 1 cut(s) 1148
BstF5I GGATG 3 cut(s) 117, 472, 1004
BstFNI CGCG 1 cut(s) 1150
BstHHI GCGC 2 cut(s) 296, 745
BstKTI GATC 3 cut(s) 94, 631, 979
BstMAI GTCTC 5 cut(s) 9, 549, 665, 860, 1179
BstMBI GATC 3 cut(s) 91, 628, 976
BstMWI GCNNNNNNNGC 5 cut(s) 201, 270, 445, 809, 916
BstNI CCWGG 1 cut(s) 369
BstSCI CCNGG 2 cut(s) 367, 666
BstUI CGCG 1 cut(s) 1150
BstV1I GCAGC 3 cut(s) 329, 498, 757
BstX2I RGATCY 1 cut(s) 91
BstYI RGATCY 1 cut(s) 91
BsuRI GGCC 3 cut(s) 621, 1004, 1082
BtgI CCRYGG 1 cut(s) 1148
BtsCI GGATG 3 cut(s) 117, 472, 1004
BtsI GCAGTG 2 cut(s) 450, 966
BtsIMutI CAGTG 3 cut(s) 450, 453, 966
BveI ACCTGC 1 cut(s) 221
Cac8I GCNNGC 5 cut(s) 147, 441, 462, 1130, 1193
CciI TCATGA 1 cut(s) 322
CfoI GCGC 2 cut(s) 296, 745
Cfr13I GGNCC 2 cut(s) 1002, 1081
Cfr42I CCGCGG 1 cut(s) 1151
Csp6I GTAC 3 cut(s) 115, 220, 1091
CviAII CATG 6 cut(s) 314, 323, 497, 808, 931, 1036
CviQI GTAC 3 cut(s) 115, 220, 1091
DdeI CTNAG 2 cut(s) 456, 768
DpnI GATC 3 cut(s) 93, 630, 978
DpnII GATC 3 cut(s) 91, 628, 976
Eam1104I CTCTTC 2 cut(s) 140, 858
EarI CTCTTC 2 cut(s) 140, 858
Eco130I CCWWGG 1 cut(s) 86
Eco24I GRGCYC 2 cut(s) 304, 1111
Eco31I GGTCTC 2 cut(s) 549, 1179
Eco57I CTGAAG 2 cut(s) 782, 1065
Eco72I CACGTG 1 cut(s) 836
EcoO109I RGGNCCY 1 cut(s) 1081
EcoRI GAATTC 1 cut(s) 400
EcoRII CCWGG 1 cut(s) 367
EcoT14I CCWWGG 1 cut(s) 86
EcoT38I GRGCYC 2 cut(s) 304, 1111
ErhI CCWWGG 1 cut(s) 86
FaeI CATG 6 cut(s) 317, 326, 500, 811, 934, 1039
FalI AAGNNNNNCTT 2 cut(s) 180, 212
FaqI GGGAC 1 cut(s) 778
FatI CATG 6 cut(s) 313, 322, 496, 807, 930, 1035
FblI GTMKAC 1 cut(s) 162
Fnu4HI GCNGC 4 cut(s) 318, 487, 746, 1005
FokI GGATG 3 cut(s) 104, 479, 1011
FriOI GRGCYC 2 cut(s) 304, 1111
Fsp4HI GCNGC 4 cut(s) 318, 487, 746, 1005
FspBI CTAG 4 cut(s) 27, 146, 227, 995
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 2 cut(s) 295, 744
GluI GCNGC 4 cut(s) 318, 487, 746, 1005
HaeIII GGCC 3 cut(s) 621, 1004, 1082
HapII CCGG 2 cut(s) 668, 877
HhaI GCGC 2 cut(s) 296, 745
Hin1II CATG 6 cut(s) 317, 326, 500, 811, 934, 1039
Hin6I GCGC 2 cut(s) 294, 743
HinP1I GCGC 2 cut(s) 294, 743
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HinfI GANTC 2 cut(s) 72, 99
HpaI GTTAAC 1 cut(s) 63
HpaII CCGG 2 cut(s) 668, 877
HphI GGTGA 2 cut(s) 383, 1137
Hpy166II GTNNAC 4 cut(s) 63, 163, 361, 1123
Hpy188I TCNGA 4 cut(s) 335, 411, 568, 859
Hpy188III TCNNGA 4 cut(s) 323, 350, 593, 614
Hpy8I GTNNAC 4 cut(s) 63, 163, 361, 1123
HpyAV CCTTC 3 cut(s) 413, 702, 806
HpyCH4III ACNGT 3 cut(s) 287, 577, 648
HpyCH4IV ACGT 2 cut(s) 835, 1093
HpyCH4V TGCA 8 cut(s) 317, 443, 448, 486, 506, 884, 941, 971
HpyF10VI GCNNNNNNNGC 5 cut(s) 201, 270, 445, 809, 916
HpyF3I CTNAG 2 cut(s) 456, 768
HpySE526I ACGT 2 cut(s) 835, 1093
Hsp92II CATG 6 cut(s) 317, 326, 500, 811, 934, 1039
HspAI GCGC 2 cut(s) 294, 743
KspAI GTTAAC 1 cut(s) 63
KspI CCGCGG 1 cut(s) 1151
Kzo9I GATC 3 cut(s) 91, 628, 976
LmnI GCTCC 2 cut(s) 299, 1114
Lsp1109I GCAGC 3 cut(s) 329, 498, 757
MaeI CTAG 4 cut(s) 27, 146, 227, 995
MaeII ACGT 2 cut(s) 835, 1093
MaeIII GTNAC 2 cut(s) 287, 1051
MalI GATC 3 cut(s) 93, 630, 978
MboI GATC 3 cut(s) 91, 628, 976
MboII GAAGA 7 cut(s) 86, 127, 269, 687, 852, 875, 1058
MflI RGATCY 1 cut(s) 91
MhlI GDGCHC 2 cut(s) 304, 1111
MluCI AATT 8 cut(s) 9, 305, 400, 585, 624, 657, 902, 1061
MlyI GAGTC 2 cut(s) 81, 93
MmeI TCCRAC 2 cut(s) 65, 1136
MnlI CCTC 4 cut(s) 526, 888, 941, 1060
MseI TTAA 4 cut(s) 62, 80, 105, 1103
MslI CAYNNNNRTG 1 cut(s) 327
MspA1I CMGCKG 1 cut(s) 1150
MspI CCGG 2 cut(s) 668, 877
MspR9I CCNGG 2 cut(s) 369, 668
Mva1269I GAATGC 1 cut(s) 943
MvaI CCWGG 1 cut(s) 369
MvnI CGCG 1 cut(s) 1150
MwoI GCNNNNNNNGC 5 cut(s) 201, 270, 445, 809, 916
NciI CCSGG 1 cut(s) 668
NdeII GATC 3 cut(s) 91, 628, 976
NheI GCTAGC 1 cut(s) 145
NlaIII CATG 6 cut(s) 317, 326, 500, 811, 934, 1039
NlaIV GGNNCC 5 cut(s) 265, 301, 514, 1083, 1110
NmuCI GTSAC 1 cut(s) 1051
NsbI TGCGCA 1 cut(s) 744
PagI TCATGA 1 cut(s) 322
PctI GAATGC 1 cut(s) 943
Pfl23II CGTACG 1 cut(s) 1090
PfoI TCCNGGA 1 cut(s) 666
PkrI GCNGC 4 cut(s) 319, 488, 747, 1006
PleI GAGTC 2 cut(s) 80, 93
PmaCI CACGTG 1 cut(s) 836
PmlI CACGTG 1 cut(s) 836
PpsI GAGTC 2 cut(s) 80, 93
Ppu21I YACGTR 1 cut(s) 836
Psp6I CCWGG 1 cut(s) 367
PspCI CACGTG 1 cut(s) 836
PspGI CCWGG 1 cut(s) 367
PspLI CGTACG 1 cut(s) 1090
PspN4I GGNNCC 5 cut(s) 265, 301, 514, 1083, 1110
PspPI GGNCC 2 cut(s) 1002, 1081
PsuI RGATCY 1 cut(s) 91
RsaI GTAC 3 cut(s) 116, 221, 1092
RsaNI GTAC 3 cut(s) 115, 220, 1091
RseI CAYNNNNRTG 1 cut(s) 327
SacII CCGCGG 1 cut(s) 1151
SaqAI TTAA 4 cut(s) 62, 80, 105, 1103
SatI GCNGC 4 cut(s) 318, 487, 746, 1005
Sau3AI GATC 3 cut(s) 91, 628, 976
Sau96I GGNCC 2 cut(s) 1002, 1081
SchI GAGTC 2 cut(s) 81, 93
ScrFI CCNGG 2 cut(s) 369, 668
SduI GDGCHC 2 cut(s) 304, 1111
Sfr303I CCGCGG 1 cut(s) 1151
SgrBI CCGCGG 1 cut(s) 1151
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
SpeI ACTAGT 1 cut(s) 26
Sse9I AATT 8 cut(s) 9, 305, 400, 585, 624, 657, 902, 1061
SsiI CCGC 5 cut(s) 464, 1005, 1148, 1150, 1189
SspMI CTAG 4 cut(s) 27, 146, 227, 995
StyD4I CCNGG 2 cut(s) 367, 666
StyI CCWWGG 1 cut(s) 86
TaaI ACNGT 3 cut(s) 287, 577, 648
TaiI ACGT 2 cut(s) 838, 1096
TaqI TCGA 4 cut(s) 75, 97, 381, 946
TasI AATT 8 cut(s) 9, 305, 400, 585, 624, 657, 902, 1061
TatI WGTACW 1 cut(s) 114
TauI GCSGC 1 cut(s) 1007
Tru1I TTAA 4 cut(s) 62, 80, 105, 1103
Tru9I TTAA 4 cut(s) 62, 80, 105, 1103
TscAI CASTG 3 cut(s) 450, 460, 973
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 3 cut(s) 317, 486, 745
Tsp45I GTSAC 1 cut(s) 1051
TspDTI ATGAA 6 cut(s) 268, 302, 413, 432, 710, 876
TspGWI ACGGA 2 cut(s) 26, 1005
TspRI CASTG 3 cut(s) 450, 460, 973
XapI RAATTY 3 cut(s) 9, 400, 657
XmiI GTMKAC 1 cut(s) 162
XspI CTAG 4 cut(s) 27, 146, 227, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.