Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000919

Physical Location & Seq

Genomic Coordinates Reverse (-)

2171367 .. 2173015

Gene Structure 1649 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G07000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGCGATCCCAAGTTTCTCCATGTGTCACAAGCCCGAGCTCCTTAAGGAAGGCAAAAGCGAAGGCCAAGAAGAAGAAGGGCTAAGCTACGAGTTCCAAGAGATGTTGGACTCTCTTCCTAAGGAGAGAGGACGGAGAAATCGTTACCTTTACTTATTCCAAGGGTTTCGGTGCCAAGCTAAGGAGATTCAAGCTATCACGTCTTTCCAAAAACATTTTCAGTCCCTTCCAGACGACGTTGTCCTCGCCACCATACCTAAATCTGGCACAACCTGGTTAAAAGCTTTAACTTTCACCATCCTTACCCGTCATCGGTTTGATCCGGTTTCCTCATCAAGTTCCGACCACCCTCTTCTCACATCCAACCCTCACGACCTCGTACCTTTCTTCGAGTACAAGCTTTACGCCAACGGAAATGTTCCCGATCTCTCGGGTCTAGCCAGTCCAAGAACATTCGCAACCCACGTACCGTTCGGTGCCCTTAAGGATTCGGTCGAGAATCCCAGTGTGAAGGTTGTGTACCTGTGCCGGAACCCGTTTGACACATTCATCTCCATGTGGCATTACATCAACAACATCACTTCCGAGTCAGTGAGCGCAGTCTTGCTAGACGAAGCTTTTGATCTATATTGCCGGGGATTACTGATCGGATTTGGCCCGTTTTGGGAACACATGTTGGGATACTGGAGAGAGAGCTTGAAGAGGCCAGAGAAAGTCTTATTTTTAAAGTACGAGGATCTCAAAGAAGACATCGAGACCAACTTGAAGAAGCTAGCAAGTTTCTTAGGACTTCCTTTCACCGAAGAAGAGGAACAAAAGGGAGTTGTGAAAGCTATCGCTGATCTGTGTAGCTTTGAGAATCTGAAGAAGTTGGAGGTGAACAAGTCAAGCAAATTGATCCAGAACTATGAGAACCGGTTCTTGTTTAGGAAAGGAGAAGTGAGTGATTTGGTTAACTATTTGTCGCCATCACAAGTGGAAAGATTGTCAGCCTTAGTGGATGACAAGTTAGCTGGATCTGGTCTCACTTTCAGATTGAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006082 GO:0008146 GO:0008150 GO:0008152 GO:0009694 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010817 GO:0016740 GO:0016782 GO:0019752 GO:0032787 GO:0042221 GO:0042445 GO:0043436 GO:0044237 GO:0044281 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0080131 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

347

Amino Acids

39.65

Weight (kDa)

5.97

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sulfotransfer_1	PF00685	77 - 341	4.9e-62	Sulfotransferase domain
Sulfotransfer_3	PF13469	168 - 268	1.1e-06	Sulfotransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07000 AT5G07010
fragaria_vesca	FvH4_1g19370 FvH4_2g35250 FvH4_7g03900 FvH4_7g13440 FvH4_7g13441 FvH4_7g13451
malus_domestica	MD00G1152400.v1.1
prunus_persica	Prupe.2G043800_v2.0.a1
pyrus_communis	pycom02g23670
rosa_chinensis	RchiOBHm_Chr1g0327381 RchiOBHm_Chr1g0327411 RchiOBHm_Chr1g0327441 RchiOBHm_Chr1g0352791 RchiOBHm_Chr1g0353081 RchiOBHm_Chr2g0131991 RchiOBHm_Chr2g0132001
rosa_laevigata	RLG00000019222 RLG00000028292 RLG00000029994 RLG00000029995
rosa_multiflora	Rmu_co8009524.1_g000001 Rmu_sc0000584.1_g000024 Rmu_sc0001207.1_g000090 Rmu_sc0003600.1_g000014 Rmu_sc0003600.1_g000021 Rmu_sc0006445.1_g000009 Rmu_sc0008840.1_g000008 Rmu_sc0011915.1_g000012
rosa_roxburghii	Rroxscaffold_4G00302090 Rroxscaffold_4G00302300 Rroxscaffold_4G00302320 Rroxscaffold_4G00302340 Rroxscaffold_4G00302350 Rroxscaffold_4G00322710
rosa_rugosa	Rorug01G0066900 Rorug01G0067100 Rorug01G0233600 Rorug02G0301800.1
rosa_samantha	Rh1AG083700 Rh1AG083800 Rh1AG246900 Rh1BG066600 Rh1BG066800 Rh1BG217000 Rh1CG081700 Rh1CG230600 Rh1DG088000 Rh1DG088300 Rh1DG243100 Rh2AG353100 Rh2AG353200 Rh2BG360700 Rh2BG360800 Rh2CG338400 Rh2DG377500
rosa_wichuraiana	Rw0G018120 Rw1G006570 Rw1G006590 Rw1G020810 Rw1G021360 Rw1G021490 Rw2G028800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	239
AccB1I	GGYRCC	2 cut(s)	171, 476
AclWI	GGATC	4 cut(s)	314, 744, 892, 1024
AcuI	CTGAAG	1 cut(s)	884
AfaI	GTAC	5 cut(s)	381, 395, 468, 521, 731
AfiI	CCNNNNNNNGG	4 cut(s)	181, 263, 312, 664
AflII	CTTAAG	2 cut(s)	44, 482
AflIII	ACRYGT	1 cut(s)	672
AgeI	ACCGGT	1 cut(s)	915
AgsI	TTSAA	3 cut(s)	191, 700, 766
AjiI	CACGTC	1 cut(s)	201
AjnI	CCWGG	1 cut(s)	272
AjuI	GAANNNNNNNTTGG	2 cut(s)	201, 233
Alw21I	GWGCWC	1 cut(s)	42
Alw26I	GTCTC	2 cut(s)	749, 1028
AlwI	GGATC	4 cut(s)	314, 744, 892, 1024
Ama87I	CYCGRG	2 cut(s)	35, 430
AoxI	GGCC	3 cut(s)	64, 655, 704
ArsI	GACNNNNNNTTYG	2 cut(s)	602, 634
AsiGI	ACCGGT	1 cut(s)	915
Asp700I	GAANNNNTTC	1 cut(s)	917
AspLEI	GCGC	1 cut(s)	599
AspS9I	GGNCC	1 cut(s)	656
AsuC2I	CCSGG	1 cut(s)	635
AsuHPI	GGTGA	3 cut(s)	286, 790, 889
AsuNHI	GCTAGC	1 cut(s)	772
AvaI	CYCGRG	2 cut(s)	35, 430
AxyI	CCTNAGG	1 cut(s)	120
BaeGI	GKGCMC	1 cut(s)	481
BaeI	ACNNNNGTAYC	2 cut(s)	450, 483
BanI	GGYRCC	2 cut(s)	171, 476
BanII	GRGCYC	1 cut(s)	42
BarI	GAAGNNNNNNTAC	2 cut(s)	503, 535
BbsI	GAAGAC	1 cut(s)	753
Bbv12I	GWGCWC	1 cut(s)	42
BccI	CCATC	2 cut(s)	305, 976
BciT130I	CCWGG	1 cut(s)	274
BciVI	GTATCC	1 cut(s)	674
BcnI	CCSGG	1 cut(s)	635
BcoDI	GTCTC	2 cut(s)	749, 1028
BfaI	CTAG	3 cut(s)	437, 608, 773
BfrI	CTTAAG	2 cut(s)	44, 482
BfuI	GTATCC	1 cut(s)	674
BlpI	GCTNAGC	1 cut(s)	83
Bme1390I	CCNGG	2 cut(s)	274, 635
BmeT110I	CYCGRG	2 cut(s)	35, 430
BmgBI	CACGTC	1 cut(s)	201
BmgT120I	GGNCC	1 cut(s)	656
BmiI	GGNNCC	3 cut(s)	173, 478, 533
BmrFI	CCNGG	2 cut(s)	274, 635
BmrI	ACTGGG	1 cut(s)	498
BmtI	GCTAGC	1 cut(s)	776
BmuI	ACTGGG	1 cut(s)	498
BpiI	GAAGAC	1 cut(s)	753
BpmI	CTGGAG	1 cut(s)	706
Bpu10I	CCTNAGC	1 cut(s)	180
Bpu1102I	GCTNAGC	1 cut(s)	83
BpuMI	CCSGG	1 cut(s)	635
BsaAI	YACGTR	1 cut(s)	466
BsaI	GGTCTC	2 cut(s)	749, 1028
BsaJI	CCNNGG	2 cut(s)	160, 634
BsaWI	WCCGGW	2 cut(s)	322, 915
BsaXI	ACNNNNNCTCC	2 cut(s)	127, 157
Bsc4I	CCNNNNNNNGG	4 cut(s)	181, 263, 312, 664
Bse118I	RCCGGY	1 cut(s)	915
Bse1I	ACTGG	3 cut(s)	441, 504, 689
Bse21I	CCTNAGG	1 cut(s)	120
BseBI	CCWGG	1 cut(s)	274
BseDI	CCNNGG	2 cut(s)	160, 634
BseGI	GGATG	3 cut(s)	297, 359, 1006
BseLI	CCNNNNNNNGG	4 cut(s)	181, 263, 312, 664
BseNI	ACTGG	3 cut(s)	441, 504, 689
BseSI	GKGCMC	1 cut(s)	481
Bsh1285I	CGRYCG	1 cut(s)	495
BshFI	GGCC	3 cut(s)	66, 657, 706
BshNI	GGYRCC	2 cut(s)	171, 476
BshTI	ACCGGT	1 cut(s)	915
BsiEI	CGRYCG	1 cut(s)	495
BsiHKAI	GWGCWC	1 cut(s)	42
BsiHKCI	CYCGRG	2 cut(s)	35, 430
BsiSI	CCGG	4 cut(s)	323, 529, 634, 916
BslFI	GGGAC	1 cut(s)	208
BslI	CCNNNNNNNGG	4 cut(s)	181, 263, 312, 664
BsmAI	GTCTC	2 cut(s)	749, 1028
BsmFI	GGGAC	1 cut(s)	208
BsnI	GGCC	3 cut(s)	66, 657, 706
Bso31I	GGTCTC	2 cut(s)	749, 1028
BsoBI	CYCGRG	2 cut(s)	35, 430
Bsp1286I	GDGCHC	2 cut(s)	42, 481
Bsp143I	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
Bsp1720I	GCTNAGC	1 cut(s)	83
BspANI	GGCC	3 cut(s)	66, 657, 706
BspLI	GGNNCC	3 cut(s)	173, 478, 533
BspOI	GCTAGC	1 cut(s)	776
BspPI	GGATC	4 cut(s)	314, 744, 892, 1024
BspT107I	GGYRCC	2 cut(s)	171, 476
BspTI	CTTAAG	2 cut(s)	44, 482
BspTNI	GGTCTC	2 cut(s)	749, 1028
BsrFI	RCCGGY	1 cut(s)	915
BsrI	ACTGG	3 cut(s)	441, 504, 689
BssAI	RCCGGY	1 cut(s)	915
BssECI	CCNNGG	2 cut(s)	160, 634
BssMI	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
BssT1I	CCWWGG	1 cut(s)	160
Bst2UI	CCWGG	1 cut(s)	274
Bst4CI	ACNGT	1 cut(s)	471
Bst6I	CTCTTC	4 cut(s)	120, 357, 695, 801
BstAFI	CTTAAG	2 cut(s)	44, 482
BstBAI	YACGTR	1 cut(s)	466
BstC8I	GCNNGC	1 cut(s)	774
BstDEI	CTNAG	5 cut(s)	83, 120, 180, 784, 994
BstF5I	GGATG	3 cut(s)	297, 359, 1006
BstHHI	GCGC	1 cut(s)	599
BstKTI	GATC	9 cut(s)	9, 322, 427, 625, 648, 739, 844, 900, 1019
BstMAI	GTCTC	2 cut(s)	749, 1028
BstMBI	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
BstMCI	CGRYCG	1 cut(s)	495
BstNI	CCWGG	1 cut(s)	274
BstNSI	RCATGY	1 cut(s)	676
BstSCI	CCNGG	2 cut(s)	272, 633
BstSLI	GKGCMC	1 cut(s)	481
BstV2I	GAAGAC	1 cut(s)	753
BstX2I	RGATCY	2 cut(s)	736, 1016
BstYI	RGATCY	2 cut(s)	736, 1016
Bsu36I	CCTNAGG	1 cut(s)	120
BsuI	GTATCC	1 cut(s)	674
BsuRI	GGCC	3 cut(s)	66, 657, 706
BtrI	CACGTC	1 cut(s)	201
BtsCI	GGATG	3 cut(s)	297, 359, 1006
BtsIMutI	CAGTG	2 cut(s)	511, 597
Cac8I	GCNNGC	1 cut(s)	774
CfoI	GCGC	1 cut(s)	599
Cfr10I	RCCGGY	1 cut(s)	915
Cfr13I	GGNCC	1 cut(s)	656
CsiI	ACCWGGT	1 cut(s)	272
Csp6I	GTAC	5 cut(s)	380, 394, 467, 520, 730
CspAI	ACCGGT	1 cut(s)	915
CviAII	CATG	3 cut(s)	22, 556, 673
CviQI	GTAC	5 cut(s)	380, 394, 467, 520, 730
DdeI	CTNAG	5 cut(s)	83, 120, 180, 784, 994
DpnI	GATC	9 cut(s)	8, 321, 426, 624, 647, 738, 843, 899, 1018
DpnII	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
DraI	TTTAAA	1 cut(s)	726
DrdI	GACNNNNNNGTC	1 cut(s)	239
DseDI	GACNNNNNNGTC	1 cut(s)	239
Eam1104I	CTCTTC	4 cut(s)	120, 357, 695, 801
EarI	CTCTTC	4 cut(s)	120, 357, 695, 801
Ecl136II	GAGCTC	1 cut(s)	40
Eco130I	CCWWGG	1 cut(s)	160
Eco24I	GRGCYC	1 cut(s)	42
Eco31I	GGTCTC	2 cut(s)	749, 1028
Eco53kI	GAGCTC	1 cut(s)	40
Eco57I	CTGAAG	1 cut(s)	884
Eco81I	CCTNAGG	1 cut(s)	120
Eco88I	CYCGRG	2 cut(s)	35, 430
EcoICRI	GAGCTC	1 cut(s)	40
EcoRII	CCWGG	1 cut(s)	272
EcoT14I	CCWWGG	1 cut(s)	160
EcoT38I	GRGCYC	1 cut(s)	42
ErhI	CCWWGG	1 cut(s)	160
FaeI	CATG	3 cut(s)	25, 559, 676
FaiI	YATR	6 cut(s)	23, 254, 557, 628, 674, 909
FaqI	GGGAC	1 cut(s)	208
FatI	CATG	3 cut(s)	21, 555, 672
FokI	GGATG	3 cut(s)	284, 346, 1013
FriOI	GRGCYC	1 cut(s)	42
FspBI	CTAG	3 cut(s)	437, 608, 773
GlaI	GCGC	1 cut(s)	598
GsuI	CTGGAG	1 cut(s)	706
HaeIII	GGCC	3 cut(s)	66, 657, 706
HapII	CCGG	4 cut(s)	323, 529, 634, 916
HhaI	GCGC	1 cut(s)	599
Hin1II	CATG	3 cut(s)	25, 559, 676
Hin6I	GCGC	1 cut(s)	597
HinP1I	GCGC	1 cut(s)	597
HincII	GTYRAC	1 cut(s)	955
HindII	GTYRAC	1 cut(s)	955
HindIII	AAGCTT	3 cut(s)	282, 398, 615
HinfI	GANTC	6 cut(s)	110, 187, 488, 499, 587, 859
HpaI	GTTAAC	1 cut(s)	955
HpaII	CCGG	4 cut(s)	323, 529, 634, 916
HphI	GGTGA	3 cut(s)	286, 790, 889
Hpy166II	GTNNAC	3 cut(s)	520, 880, 955
Hpy188I	TCNGA	5 cut(s)	343, 586, 650, 864, 1034
Hpy188III	TCNNGA	6 cut(s)	230, 371, 422, 496, 754, 901
Hpy8I	GTNNAC	3 cut(s)	520, 880, 955
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	5 cut(s)	44, 56, 71, 236, 505
HpyCH4III	ACNGT	1 cut(s)	471
HpyCH4IV	ACGT	3 cut(s)	200, 237, 465
HpyF3I	CTNAG	5 cut(s)	83, 120, 180, 784, 994
HpySE526I	ACGT	3 cut(s)	200, 237, 465
Hsp92II	CATG	3 cut(s)	25, 559, 676
HspAI	GCGC	1 cut(s)	597
KspAI	GTTAAC	1 cut(s)	955
Kzo9I	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
LmnI	GCTCC	1 cut(s)	45
MabI	ACCWGGT	1 cut(s)	272
MaeI	CTAG	3 cut(s)	437, 608, 773
MaeII	ACGT	3 cut(s)	200, 237, 465
MaeIII	GTNAC	2 cut(s)	26, 143
MalI	GATC	9 cut(s)	8, 321, 426, 624, 647, 738, 843, 899, 1018
MboI	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
MflI	RGATCY	2 cut(s)	736, 1016
MhlI	GDGCHC	2 cut(s)	42, 481
MluCI	AATT	1 cut(s)	893
MlyI	GAGTC	2 cut(s)	104, 596
MmeI	TCCRAC	4 cut(s)	87, 366, 387, 852
MroXI	GAANNNNTTC	1 cut(s)	917
MseI	TTAA	7 cut(s)	45, 278, 287, 483, 725, 954, 1042
MslI	CAYNNNNRTG	1 cut(s)	554
MspCI	CTTAAG	2 cut(s)	44, 482
MspI	CCGG	4 cut(s)	323, 529, 634, 916
MspR9I	CCNGG	2 cut(s)	274, 635
MvaI	CCWGG	1 cut(s)	274
NciI	CCSGG	1 cut(s)	635
NdeII	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
NheI	GCTAGC	1 cut(s)	772
NlaIII	CATG	3 cut(s)	25, 559, 676
NlaIV	GGNNCC	3 cut(s)	173, 478, 533
NmuCI	GTSAC	1 cut(s)	26
NspI	RCATGY	1 cut(s)	676
PciI	ACATGT	1 cut(s)	672
PcsI	WCGNNNNNNNCGW	2 cut(s)	139, 462
PdmI	GAANNNNTTC	1 cut(s)	917
PfeI	GAWTC	4 cut(s)	187, 488, 499, 859
PflFI	GACNNNGTC	1 cut(s)	239
PinAI	ACCGGT	1 cut(s)	915
PleI	GAGTC	2 cut(s)	104, 595
PpsI	GAGTC	2 cut(s)	104, 595
Ppu21I	YACGTR	1 cut(s)	466
PscI	ACATGT	1 cut(s)	672
Psp124BI	GAGCTC	1 cut(s)	42
Psp6I	CCWGG	1 cut(s)	272
PspGI	CCWGG	1 cut(s)	272
PspN4I	GGNNCC	3 cut(s)	173, 478, 533
PspPI	GGNCC	1 cut(s)	656
PsuI	RGATCY	2 cut(s)	736, 1016
PsyI	GACNNNGTC	1 cut(s)	239
RsaI	GTAC	5 cut(s)	381, 395, 468, 521, 731
RsaNI	GTAC	5 cut(s)	380, 394, 467, 520, 730
RseI	CAYNNNNRTG	1 cut(s)	554
SacI	GAGCTC	1 cut(s)	42
SaqAI	TTAA	7 cut(s)	45, 278, 287, 483, 725, 954, 1042
Sau3AI	GATC	9 cut(s)	6, 319, 424, 622, 645, 736, 841, 897, 1016
Sau96I	GGNCC	1 cut(s)	656
SchI	GAGTC	2 cut(s)	104, 596
ScrFI	CCNGG	2 cut(s)	274, 635
SduI	GDGCHC	2 cut(s)	42, 481
SexAI	ACCWGGT	1 cut(s)	272
SmiMI	CAYNNNNRTG	1 cut(s)	554
SmlI	CTYRAG	2 cut(s)	44, 482
SmoI	CTYRAG	2 cut(s)	44, 482
Sse9I	AATT	1 cut(s)	893
SspMI	CTAG	3 cut(s)	437, 608, 773
SstI	GAGCTC	1 cut(s)	42
StyD4I	CCNGG	2 cut(s)	272, 633
StyI	CCWWGG	1 cut(s)	160
TaaI	ACNGT	1 cut(s)	471
TaiI	ACGT	3 cut(s)	203, 240, 468
TaqI	TCGA	3 cut(s)	390, 495, 753
TaqII	GACCGA	1 cut(s)	481
TasI	AATT	1 cut(s)	893
TatI	WGTACW	1 cut(s)	393
TfiI	GAWTC	4 cut(s)	187, 488, 499, 859
Tru1I	TTAA	7 cut(s)	45, 278, 287, 483, 725, 954, 1042
Tru9I	TTAA	7 cut(s)	45, 278, 287, 483, 725, 954, 1042
TscAI	CASTG	2 cut(s)	511, 597
TseFI	GTSAC	1 cut(s)	26
Tsp45I	GTSAC	1 cut(s)	26
TspDTI	ATGAA	1 cut(s)	538
TspGWI	ACGGA	2 cut(s)	148, 426
TspRI	CASTG	2 cut(s)	511, 597
Tth111I	GACNNNGTC	1 cut(s)	239
Vha464I	CTTAAG	2 cut(s)	44, 482
XceI	RCATGY	1 cut(s)	676
XmnI	GAANNNNTTC	1 cut(s)	917
XspI	CTAG	3 cut(s)	437, 608, 773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.