Rorug01G0067100

Belongs to the sulfotransferase 1 family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
10871437 .. 10871613
177 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0067100.1

Sequence Viewer

Length: 177 bp
ATGTCACTCATATCTTTCGGGAAGGAAATGCTATGGCAGATGTGTTGGCTAACTATGGAGCATCCCATGAAGGTACTCACAGTTGGGATTCTTTGCCTCAATTTTTATCAGCTGCTTTTGGCCGAGATCTTGTTCGATCTACAGATGTTGATTAATTGTGTGGTTTTTTCTTACTGA

Protein Analysis

58

Amino Acids

6.86

Weight (kDa)

4.83

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 120
AfaI GTAC 1 cut(s) 75
AluBI AGCT 1 cut(s) 112
AluI AGCT 1 cut(s) 112
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 112
AseI ATTAAT 1 cut(s) 153
BbvI GCAGC 1 cut(s) 99
BfmI CTRYAG 1 cut(s) 140
BglII AGATCT 1 cut(s) 126
BisI GCNGC 1 cut(s) 113
BlsI GCNGC 1 cut(s) 114
BmsI GCATC 1 cut(s) 70
BseGI GGATG 1 cut(s) 61
BseXI GCAGC 1 cut(s) 99
BshFI GGCC 1 cut(s) 122
BsnI GGCC 1 cut(s) 122
Bsp143I GATC 2 cut(s) 126, 136
BspANI GGCC 1 cut(s) 122
BssMI GATC 2 cut(s) 126, 136
Bst4CI ACNGT 1 cut(s) 82
BstF5I GGATG 1 cut(s) 61
BstKTI GATC 2 cut(s) 129, 139
BstMBI GATC 2 cut(s) 126, 136
BstSFI CTRYAG 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 99
BstX2I RGATCY 1 cut(s) 126
BstYI RGATCY 1 cut(s) 126
BsuRI GGCC 1 cut(s) 122
BtsCI GGATG 1 cut(s) 61
Csp6I GTAC 1 cut(s) 74
CviAII CATG 1 cut(s) 67
CviJI RGCY 3 cut(s) 49, 112, 122
CviKI_1 RGCY 3 cut(s) 49, 112, 122
CviQI GTAC 1 cut(s) 74
DpnI GATC 2 cut(s) 128, 138
DpnII GATC 2 cut(s) 126, 136
EaeI YGGCCR 1 cut(s) 120
FaeI CATG 1 cut(s) 70
FaiI YATR 4 cut(s) 11, 34, 56, 68
FatI CATG 1 cut(s) 66
Fnu4HI GCNGC 1 cut(s) 113
FokI GGATG 1 cut(s) 48
Fsp4HI GCNGC 1 cut(s) 113
GluI GCNGC 1 cut(s) 113
HaeIII GGCC 1 cut(s) 122
Hin1II CATG 1 cut(s) 70
HinfI GANTC 1 cut(s) 88
Hpy188III TCNNGA 1 cut(s) 19
HpyAV CCTTC 2 cut(s) 16, 64
HpyCH4III ACNGT 1 cut(s) 82
Hsp92II CATG 1 cut(s) 70
Kzo9I GATC 2 cut(s) 126, 136
LmnI GCTCC 1 cut(s) 58
Lsp1109I GCAGC 1 cut(s) 99
LweI GCATC 1 cut(s) 70
MaeIII GTNAC 1 cut(s) 3
MalI GATC 2 cut(s) 128, 138
MboI GATC 2 cut(s) 126, 136
MflI RGATCY 1 cut(s) 126
MluCI AATT 2 cut(s) 100, 154
MnlI CCTC 1 cut(s) 107
MseI TTAA 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 112
NdeII GATC 2 cut(s) 126, 136
NlaIII CATG 1 cut(s) 70
NmeAIII GCCGAG 1 cut(s) 148
NmuCI GTSAC 1 cut(s) 3
PfeI GAWTC 1 cut(s) 88
PkrI GCNGC 1 cut(s) 114
PshBI ATTAAT 1 cut(s) 153
PsuI RGATCY 1 cut(s) 126
PvuII CAGCTG 1 cut(s) 112
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
SaqAI TTAA 1 cut(s) 153
SatI GCNGC 1 cut(s) 113
Sau3AI GATC 2 cut(s) 126, 136
SetI ASST 2 cut(s) 75, 114
SfaNI GCATC 1 cut(s) 70
SfcI CTRYAG 1 cut(s) 140
SgeI CNNG 4 cut(s) 31, 79, 136, 142
Sse9I AATT 2 cut(s) 100, 154
TaaI ACNGT 1 cut(s) 82
TaqI TCGA 1 cut(s) 135
TasI AATT 2 cut(s) 100, 154
TfiI GAWTC 1 cut(s) 88
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TseFI GTSAC 1 cut(s) 3
TseI GCWGC 1 cut(s) 112
Tsp45I GTSAC 1 cut(s) 3
TspDTI ATGAA 1 cut(s) 83
VspI ATTAAT 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.