AT5G07010

Belongs to the sulfotransferase 1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
2174668 .. 2176446
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G07010.1

Sequence Viewer

Length: 1080 bp
ATGGCTACCTCAAGCATGAAGAGCATTCCAATGGCGATCCCAAGTTTCTCCATGTGTCACAAGCTCGAGCTCCTTAAAGAAGGCAAAACTCGCGACGTCCCGAAAGCCGAAGAAGATGAAGGGCTAAGCTGCGAGTTCCAAGAGATGTTGGATTCTCTTCCTAAGGAGAGAGGATGGAGAACTCGTTACCTTTACCTATTCCAAGGGTTTTGGTGCCAAGCCAAAGAGATTCAAGCCATCATGTCTTTCCAAAAACATTTCCAATCCCTCGAAAACGACGTCGTTCTCGCCACCATACCTAAATCCGGTACAACCTGGCTAAAAGCTTTAACTTTCACCATCCTTAACCGTCACCGGTTTGATCCGGTTGCCTCGAGTACCAACCACCCTCTTTTCACTTCCAACCCTCATGACCTTGTACCTTTCTTCGAGTACAAGCTTTACGCCAACGGAGATGTTCCCGATCTCTCGGGTCTAGCCAGTCCAAGAACGTTCGCAACCCACTTACCGTTCGGTTCCCTAAAGGAAACGATCGAGAAACCCGGTGTGAAGGTCGTGTACTTGTGCCGGAACCCGTTTGACACATTCATCTCTTCGTGGCATTACACCAACAACATCAAATCCGAGTCAGTGAGCCCAGTCTTGCTAGACCAAGCTTTTGATCTGTATTGCCGGGGAGTGATCGGGTTTGGCCCGTTTTGGGAACACATGTTGGGATACTGGAGAGAGAGCTTGAAGAGACCAGAGAAAGTCTTCTTTTTAAGGTACGAGGATCTCAAAGACGACATCGAGACCAACTTGAAGAGGCTTGCAACTTTCTTAGAGCTTCCTTTCACCGAAGAAGAGGAACGAAAGGGAGTTGTGAAGGCTATCGCCGAGCTGTGTAGCTTCGAGAATCTGAAGAAGTTGGAGGTGAACAAGTCAAACAAGTCGATCAAGAACTTTGAGAATCGATTCTTGTTTCGGAAAGGAGAAGTGAGTGATTGGGTTAACTATTTGTCACCTTCACAAGTGGAAAGATTGTCAGCCTTAGTGGATGACAAGTTAGGTGGATCTGGTCTCACTTTCAGGTTGAGCTAA

Protein Analysis

359

Amino Acids

41.36

Weight (kDa)

6.73

Isoelectric Point (pI)

41.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sulfotransfer_1 PF00685 92 - 353 6.1e-65 Sulfotransferase domain
Sulfotransfer_3 PF13469 181 - 280 1.2e-07 Sulfotransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 99, 282
AccB1I GGYRCC 1 cut(s) 213
AccII CGCG 1 cut(s) 93
AclI AACGTT 1 cut(s) 491
AclWI GGATC 4 cut(s) 31, 356, 780, 1060
AcuI CTGAAG 1 cut(s) 920
AcyI GRCGYC 2 cut(s) 96, 279
AfaI GTAC 6 cut(s) 310, 379, 420, 434, 560, 767
AfiI CCNNNNNNNGG 2 cut(s) 305, 700
AflIII ACRYGT 1 cut(s) 708
AgeI ACCGGT 1 cut(s) 354
AgsI TTSAA 3 cut(s) 233, 736, 802
AjnI CCWGG 1 cut(s) 314
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 3 cut(s) 733, 785, 1064
AlwI GGATC 4 cut(s) 31, 356, 780, 1060
Ama87I CYCGRG 3 cut(s) 65, 373, 469
AoxI GGCC 1 cut(s) 691
ApeKI GCWGC 1 cut(s) 129
ArsI GACNNNNNNTTYG 4 cut(s) 264, 296, 641, 673
AsiGI ACCGGT 1 cut(s) 354
Asp700I GAANNNNTTC 2 cut(s) 752, 953
AspS9I GGNCC 1 cut(s) 692
AsuC2I CCSGG 2 cut(s) 543, 674
AsuHPI GGTGA 5 cut(s) 328, 344, 826, 925, 993
AvaI CYCGRG 3 cut(s) 65, 373, 469
AxyI CCTNAGG 1 cut(s) 162
BanI GGYRCC 1 cut(s) 213
BanII GRGCYC 2 cut(s) 72, 638
BarI GAAGNNNNNNTAC 2 cut(s) 542, 574
BbsI GAAGAC 1 cut(s) 745
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 1 cut(s) 116
BccI CCATC 3 cut(s) 168, 245, 347
BciT130I CCWGG 1 cut(s) 316
BciVI GTATCC 1 cut(s) 710
BcnI CCSGG 2 cut(s) 543, 674
BcoDI GTCTC 3 cut(s) 733, 785, 1064
BfaI CTAG 2 cut(s) 476, 647
BfuI GTATCC 1 cut(s) 710
BisI GCNGC 1 cut(s) 130
BlpI GCTNAGC 1 cut(s) 125
BlsI GCNGC 1 cut(s) 131
Bme1390I CCNGG 3 cut(s) 316, 543, 674
BmeT110I CYCGRG 3 cut(s) 65, 373, 469
BmgT120I GGNCC 1 cut(s) 692
BmiI GGNNCC 3 cut(s) 215, 517, 572
BmrFI CCNGG 3 cut(s) 316, 543, 674
BmrI ACTGGG 1 cut(s) 632
BmuI ACTGGG 1 cut(s) 632
BpiI GAAGAC 1 cut(s) 745
BpmI CTGGAG 1 cut(s) 742
Bpu1102I GCTNAGC 1 cut(s) 125
BpuMI CCSGG 2 cut(s) 543, 674
Bsa29I ATCGAT 1 cut(s) 952
BsaHI GRCGYC 2 cut(s) 96, 279
BsaI GGTCTC 3 cut(s) 733, 785, 1064
BsaJI CCNNGG 2 cut(s) 202, 673
BsaWI WCCGGW 3 cut(s) 305, 354, 364
BsaXI ACNNNNNCTCC 2 cut(s) 169, 199
Bsc4I CCNNNNNNNGG 2 cut(s) 305, 700
Bse118I RCCGGY 1 cut(s) 354
Bse1I ACTGG 3 cut(s) 480, 638, 725
Bse21I CCTNAGG 1 cut(s) 162
BseBI CCWGG 1 cut(s) 316
BseCI ATCGAT 1 cut(s) 952
BseDI CCNNGG 2 cut(s) 202, 673
BseGI GGATG 3 cut(s) 179, 339, 1042
BseLI CCNNNNNNNGG 2 cut(s) 305, 700
BseNI ACTGG 3 cut(s) 480, 638, 725
BseXI GCAGC 1 cut(s) 116
Bsh1236I CGCG 1 cut(s) 93
Bsh1285I CGRYCG 1 cut(s) 534
BshFI GGCC 1 cut(s) 693
BshNI GGYRCC 1 cut(s) 213
BshTI ACCGGT 1 cut(s) 354
BshVI ATCGAT 1 cut(s) 952
BsiEI CGRYCG 1 cut(s) 534
BsiHKAI GWGCWC 1 cut(s) 72
BsiHKCI CYCGRG 3 cut(s) 65, 373, 469
BsiSI CCGG 6 cut(s) 306, 355, 365, 543, 568, 673
BslFI GGGAC 1 cut(s) 83
BslI CCNNNNNNNGG 2 cut(s) 305, 700
BsmAI GTCTC 3 cut(s) 733, 785, 1064
BsmFI GGGAC 1 cut(s) 83
BsmI GAATGC 1 cut(s) 24
BsnI GGCC 1 cut(s) 693
Bso31I GGTCTC 3 cut(s) 733, 785, 1064
BsoBI CYCGRG 3 cut(s) 65, 373, 469
Bsp1286I GDGCHC 2 cut(s) 72, 638
Bsp143I GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
Bsp1720I GCTNAGC 1 cut(s) 125
Bsp68I TCGCGA 1 cut(s) 93
BspANI GGCC 1 cut(s) 693
BspDI ATCGAT 1 cut(s) 952
BspFNI CGCG 1 cut(s) 93
BspHI TCATGA 1 cut(s) 409
BspLI GGNNCC 3 cut(s) 215, 517, 572
BspPI GGATC 4 cut(s) 31, 356, 780, 1060
BspQI GCTCTTC 1 cut(s) 14
BspT107I GGYRCC 1 cut(s) 213
BspTNI GGTCTC 3 cut(s) 733, 785, 1064
BsrFI RCCGGY 1 cut(s) 354
BsrI ACTGG 3 cut(s) 480, 638, 725
BssAI RCCGGY 1 cut(s) 354
BssECI CCNNGG 2 cut(s) 202, 673
BssMI GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
BssNI GRCGYC 2 cut(s) 96, 279
BssT1I CCWWGG 1 cut(s) 202
Bst2UI CCWGG 1 cut(s) 316
Bst4CI ACNGT 2 cut(s) 350, 510
Bst6I CTCTTC 6 cut(s) 14, 162, 598, 731, 797, 837
BstACI GRCGYC 2 cut(s) 96, 279
BstC8I GCNNGC 1 cut(s) 810
BstDEI CTNAG 4 cut(s) 125, 162, 820, 1030
BstF5I GGATG 3 cut(s) 179, 339, 1042
BstFNI CGCG 1 cut(s) 93
BstKTI GATC 9 cut(s) 39, 364, 466, 534, 664, 684, 775, 936, 1055
BstMAI GTCTC 3 cut(s) 733, 785, 1064
BstMBI GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
BstMCI CGRYCG 1 cut(s) 534
BstMWI GCNNNNNNNGC 2 cut(s) 21, 90
BstNI CCWGG 1 cut(s) 316
BstNSI RCATGY 1 cut(s) 712
BstSCI CCNGG 3 cut(s) 314, 541, 672
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 1 cut(s) 116
BstV2I GAAGAC 1 cut(s) 745
BstX2I RGATCY 2 cut(s) 772, 1052
BstYI RGATCY 2 cut(s) 772, 1052
Bsu15I ATCGAT 1 cut(s) 952
Bsu36I CCTNAGG 1 cut(s) 162
BsuI GTATCC 1 cut(s) 710
BsuRI GGCC 1 cut(s) 693
BsuTUI ATCGAT 1 cut(s) 952
BtsCI GGATG 3 cut(s) 179, 339, 1042
BtsIMutI CAGTG 1 cut(s) 636
BtuMI TCGCGA 1 cut(s) 93
Cac8I GCNNGC 1 cut(s) 810
CciI TCATGA 1 cut(s) 409
Cfr10I RCCGGY 1 cut(s) 354
Cfr13I GGNCC 1 cut(s) 692
ClaI ATCGAT 1 cut(s) 952
Csp6I GTAC 6 cut(s) 309, 378, 419, 433, 559, 766
CspAI ACCGGT 1 cut(s) 354
CspCI CAANNNNNGTGG 2 cut(s) 1030, 1065
CviAII CATG 5 cut(s) 16, 52, 241, 410, 709
CviQI GTAC 6 cut(s) 309, 378, 419, 433, 559, 766
DdeI CTNAG 4 cut(s) 125, 162, 820, 1030
DpnI GATC 9 cut(s) 38, 363, 465, 533, 663, 683, 774, 935, 1054
DpnII GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
Eam1104I CTCTTC 6 cut(s) 14, 162, 598, 731, 797, 837
EarI CTCTTC 6 cut(s) 14, 162, 598, 731, 797, 837
Ecl136II GAGCTC 1 cut(s) 70
Eco130I CCWWGG 1 cut(s) 202
Eco24I GRGCYC 2 cut(s) 72, 638
Eco31I GGTCTC 3 cut(s) 733, 785, 1064
Eco53kI GAGCTC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 920
Eco81I CCTNAGG 1 cut(s) 162
Eco88I CYCGRG 3 cut(s) 65, 373, 469
EcoICRI GAGCTC 1 cut(s) 70
EcoRII CCWGG 1 cut(s) 314
EcoT14I CCWWGG 1 cut(s) 202
EcoT38I GRGCYC 2 cut(s) 72, 638
ErhI CCWWGG 1 cut(s) 202
FaeI CATG 5 cut(s) 19, 55, 244, 413, 712
FaiI YATR 6 cut(s) 17, 53, 242, 296, 411, 710
FaqI GGGAC 1 cut(s) 83
FatI CATG 5 cut(s) 15, 51, 240, 409, 708
Fnu4HI GCNGC 1 cut(s) 130
FokI GGATG 3 cut(s) 186, 326, 1049
FriOI GRGCYC 2 cut(s) 72, 638
Fsp4HI GCNGC 1 cut(s) 130
FspBI CTAG 2 cut(s) 476, 647
GluI GCNGC 1 cut(s) 130
GsuI CTGGAG 1 cut(s) 742
HaeIII GGCC 1 cut(s) 693
HapII CCGG 6 cut(s) 306, 355, 365, 543, 568, 673
Hin1I GRCGYC 2 cut(s) 96, 279
Hin1II CATG 5 cut(s) 19, 55, 244, 413, 712
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HindIII AAGCTT 3 cut(s) 324, 437, 654
HinfI GANTC 6 cut(s) 152, 229, 626, 895, 949, 954
HpaI GTTAAC 1 cut(s) 991
HpaII CCGG 6 cut(s) 306, 355, 365, 543, 568, 673
HphI GGTGA 5 cut(s) 328, 344, 826, 925, 993
Hpy166II GTNNAC 3 cut(s) 559, 916, 991
Hpy188I TCNGA 3 cut(s) 625, 900, 966
Hpy188III TCNNGA 8 cut(s) 92, 100, 410, 461, 535, 790, 892, 937
Hpy8I GTNNAC 3 cut(s) 559, 916, 991
Hpy99I CGWCG 3 cut(s) 98, 281, 284
HpyAV CCTTC 5 cut(s) 74, 113, 544, 859, 1014
HpyCH4III ACNGT 2 cut(s) 350, 510
HpyCH4IV ACGT 3 cut(s) 96, 279, 491
HpyCH4V TGCA 1 cut(s) 812
HpyF10VI GCNNNNNNNGC 2 cut(s) 21, 90
HpyF3I CTNAG 4 cut(s) 125, 162, 820, 1030
HpySE526I ACGT 3 cut(s) 96, 279, 491
Hsp92I GRCGYC 2 cut(s) 96, 279
Hsp92II CATG 5 cut(s) 19, 55, 244, 413, 712
KspAI GTTAAC 1 cut(s) 991
Kzo9I GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
LguI GCTCTTC 1 cut(s) 14
LmnI GCTCC 1 cut(s) 75
Lsp1109I GCAGC 1 cut(s) 116
MaeI CTAG 2 cut(s) 476, 647
MaeII ACGT 3 cut(s) 96, 279, 491
MaeIII GTNAC 4 cut(s) 56, 185, 350, 999
MalI GATC 9 cut(s) 38, 363, 465, 533, 663, 683, 774, 935, 1054
MboI GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
MflI RGATCY 2 cut(s) 772, 1052
MhlI GDGCHC 2 cut(s) 72, 638
MlyI GAGTC 1 cut(s) 635
MmeI TCCRAC 3 cut(s) 129, 426, 888
MroXI GAANNNNTTC 2 cut(s) 752, 953
MseI TTAA 5 cut(s) 75, 329, 345, 761, 990
MslI CAYNNNNRTG 1 cut(s) 29
MspI CCGG 6 cut(s) 306, 355, 365, 543, 568, 673
MspR9I CCNGG 3 cut(s) 316, 543, 674
Mva1269I GAATGC 1 cut(s) 24
MvaI CCWGG 1 cut(s) 316
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 2 cut(s) 21, 90
NciI CCSGG 2 cut(s) 543, 674
NdeII GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
NlaIII CATG 5 cut(s) 19, 55, 244, 413, 712
NlaIV GGNNCC 3 cut(s) 215, 517, 572
NmeAIII GCCGAG 1 cut(s) 901
NmuCI GTSAC 3 cut(s) 56, 350, 999
NruI TCGCGA 1 cut(s) 93
NspI RCATGY 1 cut(s) 712
PaeR7I CTCGAG 2 cut(s) 65, 373
PagI TCATGA 1 cut(s) 409
PciI ACATGT 1 cut(s) 708
PciSI GCTCTTC 1 cut(s) 14
PcsI WCGNNNNNNNCGW 1 cut(s) 276
PctI GAATGC 1 cut(s) 24
PdmI GAANNNNTTC 2 cut(s) 752, 953
PfeI GAWTC 5 cut(s) 152, 229, 895, 949, 954
PinAI ACCGGT 1 cut(s) 354
PkrI GCNGC 1 cut(s) 131
Ple19I CGATCG 1 cut(s) 534
PleI GAGTC 1 cut(s) 634
PpsI GAGTC 1 cut(s) 634
PscI ACATGT 1 cut(s) 708
Psp124BI GAGCTC 1 cut(s) 72
Psp1406I AACGTT 1 cut(s) 491
Psp6I CCWGG 1 cut(s) 314
PspGI CCWGG 1 cut(s) 314
PspN4I GGNNCC 3 cut(s) 215, 517, 572
PspPI GGNCC 1 cut(s) 692
PspXI VCTCGAGB 2 cut(s) 65, 373
PsuI RGATCY 2 cut(s) 772, 1052
PvuI CGATCG 1 cut(s) 534
RruI TCGCGA 1 cut(s) 93
RsaI GTAC 6 cut(s) 310, 379, 420, 434, 560, 767
RsaNI GTAC 6 cut(s) 309, 378, 419, 433, 559, 766
RseI CAYNNNNRTG 1 cut(s) 29
SacI GAGCTC 1 cut(s) 72
SapI GCTCTTC 1 cut(s) 14
SaqAI TTAA 5 cut(s) 75, 329, 345, 761, 990
SatI GCNGC 1 cut(s) 130
Sau3AI GATC 9 cut(s) 36, 361, 463, 531, 661, 681, 772, 933, 1052
Sau96I GGNCC 1 cut(s) 692
SchI GAGTC 1 cut(s) 635
ScrFI CCNGG 3 cut(s) 316, 543, 674
SduI GDGCHC 2 cut(s) 72, 638
Sfr274I CTCGAG 2 cut(s) 65, 373
SlaI CTCGAG 2 cut(s) 65, 373
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 3 cut(s) 10, 65, 373
SmoI CTYRAG 3 cut(s) 10, 65, 373
SspMI CTAG 2 cut(s) 476, 647
SstI GAGCTC 1 cut(s) 72
StyD4I CCNGG 3 cut(s) 314, 541, 672
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 2 cut(s) 350, 510
TaiI ACGT 3 cut(s) 99, 282, 494
TaqI TCGA 9 cut(s) 66, 270, 374, 429, 534, 789, 891, 932, 952
TatI WGTACW 2 cut(s) 432, 558
TfiI GAWTC 5 cut(s) 152, 229, 895, 949, 954
Tru1I TTAA 5 cut(s) 75, 329, 345, 761, 990
Tru9I TTAA 5 cut(s) 75, 329, 345, 761, 990
TscAI CASTG 1 cut(s) 636
TseFI GTSAC 3 cut(s) 56, 350, 999
TseI GCWGC 1 cut(s) 129
Tsp45I GTSAC 3 cut(s) 56, 350, 999
TspDTI ATGAA 3 cut(s) 32, 132, 577
TspGWI ACGGA 1 cut(s) 465
TspRI CASTG 1 cut(s) 636
XceI RCATGY 1 cut(s) 712
XhoI CTCGAG 2 cut(s) 65, 373
XmnI GAANNNNTTC 2 cut(s) 752, 953
XspI CTAG 2 cut(s) 476, 647
ZraI GACGTC 2 cut(s) 97, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.