Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000919

Physical Location & Seq

Genomic Coordinates Reverse (-)

4846289 .. 4849099

Gene Structure 2811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G043800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGCACCTACCCTTGAAGAACAACAAAAACTCACTGATGAGTGCACTGAACTGCCTCTTTCTCTCCCAAAAGAGAAAGGTTGGAGAACCCTTCACCTCTATCAGTTCCAAGGCTTTTGGTGCCAGTCAGCTGAGATCCAATCCATTATGTCTTTCCAAAAGCACTTCCAAGCTAATGACACTGACATAGTGGTGGCCAGCATTCCAAAATCAGGCACCACATGGCTGAAAACCTTGGCTTTTGCTGTTTCGAACCGGCACCGTTTCGTTCCAAACTCAAAGAGCCATCCTTTGCTCAATTCAAACCCTCATGATCTTGTGCCTTTCCTTGAACTCTTTGGAACACACATACCCTTTGCTTCATTGGGAAATTCCATACAAAATTCTGACGCAAAGATTGTTTATATCTGCAGAAATCCACTTGACACATTTGTCTCCTCTTGGCATTTCCTTAACAAAGTGAAACCAGAATCTGGATCCCCAATCTCCATGGAGGAGGCCTTTGACATGTACTGCAAAGGCATTGTTGGGTTTGGTCCATTTTGGGATCACATGCTTGGGTATTGGAAGGAGAGCTTGCTGAGGCCTAACAATGTGTTGTTCTTGAAGTATGAGGACATGAAGGAAGATGATGCCTTTCAGTTGAAAAAAATGGCAAAGTTTTTGGGTTTCCCTTTTACTTTGGAGGAGGAGAGAGGTGGTGTGGTTGAAAACATTGCAAAGCTTTGCTGTTTTGAGAACATGAAGAAATTGGAGGTTAATAAAATTGGGTCTTCTATTGGGAATTTTGAGAATAAAAACCTGTTTAGAAAAGCTGAGGTGGGAGATTGGGTGAACTATTTGTCACCTAAGATGGTGGAGAGGTTGTCCAAAGTCATAGAAGAAAGGTTGGGTGGTTCAGGTTTGGGATTCAAAGTGTTTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008146 GO:0008150 GO:0008152 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009694 GO:0009719 GO:0009725 GO:0009753 GO:0009814 GO:0009861 GO:0009987 GO:0010033 GO:0010817 GO:0016143 GO:0016144 GO:0016740 GO:0016782 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0032260 GO:0032787 GO:0042221 GO:0042445 GO:0043207 GO:0043436 GO:0044237 GO:0044249 GO:0044272 GO:0044281 GO:0044550 GO:0045087 GO:0047364 GO:0050896 GO:0051704 GO:0051707 GO:0065007 GO:0065008 GO:0071704 GO:0080131 GO:0098542 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sulfotransfer_1

Protein Analysis

309

Amino Acids

35.19

Weight (kDa)

6.72

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000919)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G07000 AT5G07010
fragaria_vesca	FvH4_1g19370 FvH4_2g35250 FvH4_7g03900 FvH4_7g13440 FvH4_7g13441 FvH4_7g13451
malus_domestica	MD00G1152400.v1.1
prunus_persica	Prupe.2G043800_v2.0.a1
pyrus_communis	pycom02g23670
rosa_chinensis	RchiOBHm_Chr1g0327381 RchiOBHm_Chr1g0327411 RchiOBHm_Chr1g0327441 RchiOBHm_Chr1g0352791 RchiOBHm_Chr1g0353081 RchiOBHm_Chr2g0131991 RchiOBHm_Chr2g0132001
rosa_laevigata	RLG00000019222 RLG00000028292 RLG00000029994 RLG00000029995
rosa_multiflora	Rmu_co8009524.1_g000001 Rmu_sc0000584.1_g000024 Rmu_sc0001207.1_g000090 Rmu_sc0003600.1_g000014 Rmu_sc0003600.1_g000021 Rmu_sc0006445.1_g000009 Rmu_sc0008840.1_g000008 Rmu_sc0011915.1_g000012
rosa_roxburghii	Rroxscaffold_4G00302090 Rroxscaffold_4G00302300 Rroxscaffold_4G00302320 Rroxscaffold_4G00302340 Rroxscaffold_4G00302350 Rroxscaffold_4G00322710
rosa_rugosa	Rorug01G0066900 Rorug01G0067100 Rorug01G0233600 Rorug02G0301800.1
rosa_samantha	Rh1AG083700 Rh1AG083800 Rh1AG246900 Rh1BG066600 Rh1BG066800 Rh1BG217000 Rh1CG081700 Rh1CG230600 Rh1DG088000 Rh1DG088300 Rh1DG243100 Rh2AG353100 Rh2AG353200 Rh2BG360700 Rh2BG360800 Rh2CG338400 Rh2DG377500
rosa_wichuraiana	Rw0G018120 Rw1G006570 Rw1G006590 Rw1G020810 Rw1G021360 Rw1G021490 Rw2G028800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	431
AccB1I	GGYRCC	4 cut(s)	4, 120, 215, 258
AccB7I	CCANNNNNTGG	1 cut(s)	473
AclWI	GGATC	4 cut(s)	130, 471, 484, 555
AcoI	YGGCCR	1 cut(s)	195
AcsI	RAATTY	3 cut(s)	370, 382, 784
AfaI	GTAC	1 cut(s)	512
AfiI	CCNNNNNNNGG	2 cut(s)	212, 473
AflIII	ACRYGT	1 cut(s)	507
AgsI	TTSAA	7 cut(s)	17, 303, 332, 607, 646, 710, 913
AluBI	AGCT	5 cut(s)	131, 173, 576, 724, 815
AluI	AGCT	5 cut(s)	131, 173, 576, 724, 815
Alw21I	GWGCWC	1 cut(s)	47
Alw26I	GTCTC	1 cut(s)	439
Alw44I	GTGCAC	1 cut(s)	43
AlwI	GGATC	4 cut(s)	130, 471, 484, 555
AlwNI	CAGNNNCTG	1 cut(s)	473
AoxI	GGCC	3 cut(s)	195, 498, 584
ApaLI	GTGCAC	1 cut(s)	43
ApoI	RAATTY	3 cut(s)	370, 382, 784
AspS9I	GGNCC	1 cut(s)	536
AsuHPI	GGTGA	3 cut(s)	86, 837, 844
AsuII	TTCGAA	1 cut(s)	251
AvaII	GGWCC	1 cut(s)	536
BaeGI	GKGCMC	1 cut(s)	47
BalI	TGGCCA	1 cut(s)	197
BamHI	GGATCC	1 cut(s)	476
BanI	GGYRCC	4 cut(s)	4, 120, 215, 258
BbsI	GAAGAC	1 cut(s)	765
Bbv12I	GWGCWC	1 cut(s)	47
BbvCI	CCTCAGC	2 cut(s)	581, 816
BccI	CCATC	2 cut(s)	294, 847
BcoDI	GTCTC	1 cut(s)	439
BfmI	CTRYAG	1 cut(s)	409
Bme18I	GGWCC	1 cut(s)	536
BmgT120I	GGNCC	1 cut(s)	536
BmiI	GGNNCC	5 cut(s)	6, 122, 217, 260, 478
BmsI	GCATC	1 cut(s)	622
BpiI	GAAGAC	1 cut(s)	765
Bpu10I	CCTNAGC	2 cut(s)	581, 816
Bpu14I	TTCGAA	1 cut(s)	251
BsaJI	CCNNGG	3 cut(s)	109, 234, 489
BsaXI	ACNNNNNCTCC	4 cut(s)	816, 846, 851, 881
Bsc4I	CCNNNNNNNGG	2 cut(s)	212, 473
Bse118I	RCCGGY	1 cut(s)	255
Bse1I	ACTGG	1 cut(s)	124
Bse3DI	GCAATG	1 cut(s)	714
BseDI	CCNNGG	3 cut(s)	109, 234, 489
BseGI	GGATG	1 cut(s)	286
BseLI	CCNNNNNNNGG	2 cut(s)	212, 473
BseMI	GCAATG	1 cut(s)	714
BseMII	CTCAG	3 cut(s)	123, 572, 807
BseNI	ACTGG	1 cut(s)	124
BseRI	GAGGAG	4 cut(s)	427, 509, 701, 704
BseSI	GKGCMC	1 cut(s)	47
BshFI	GGCC	3 cut(s)	197, 500, 586
BshNI	GGYRCC	4 cut(s)	4, 120, 215, 258
BsiHKAI	GWGCWC	1 cut(s)	47
BsiSI	CCGG	1 cut(s)	256
BslI	CCNNNNNNNGG	2 cut(s)	212, 473
BsmAI	GTCTC	1 cut(s)	439
BsmI	GAATGC	1 cut(s)	201
BsnI	GGCC	3 cut(s)	197, 500, 586
Bsp119I	TTCGAA	1 cut(s)	251
Bsp1286I	GDGCHC	1 cut(s)	47
Bsp143I	GATC	4 cut(s)	135, 313, 476, 547
Bsp19I	CCATGG	1 cut(s)	489
BspANI	GGCC	3 cut(s)	197, 500, 586
BspCNI	CTCAG	3 cut(s)	124, 573, 808
BspHI	TCATGA	1 cut(s)	310
BspLI	GGNNCC	5 cut(s)	6, 122, 217, 260, 478
BspMAI	CTGCAG	1 cut(s)	413
BspPI	GGATC	4 cut(s)	130, 471, 484, 555
BspT104I	TTCGAA	1 cut(s)	251
BspT107I	GGYRCC	4 cut(s)	4, 120, 215, 258
BsrDI	GCAATG	1 cut(s)	714
BsrFI	RCCGGY	1 cut(s)	255
BsrI	ACTGG	1 cut(s)	124
BssAI	RCCGGY	1 cut(s)	255
BssECI	CCNNGG	3 cut(s)	109, 234, 489
BssMI	GATC	4 cut(s)	135, 313, 476, 547
BssT1I	CCWWGG	3 cut(s)	109, 234, 489
Bst4CI	ACNGT	1 cut(s)	263
BstBI	TTCGAA	1 cut(s)	251
BstC8I	GCNNGC	2 cut(s)	199, 578
BstDEI	CTNAG	4 cut(s)	132, 581, 816, 849
BstDSI	CCRYGG	1 cut(s)	489
BstF5I	GGATG	1 cut(s)	286
BstKTI	GATC	4 cut(s)	138, 316, 479, 550
BstMAI	GTCTC	1 cut(s)	439
BstMBI	GATC	4 cut(s)	135, 313, 476, 547
BstMWI	GCNNNNNNNGC	1 cut(s)	120
BstNSI	RCATGY	2 cut(s)	511, 556
BstSFI	CTRYAG	1 cut(s)	409
BstSLI	GKGCMC	1 cut(s)	47
BstV2I	GAAGAC	1 cut(s)	765
BstX2I	RGATCY	2 cut(s)	135, 476
BstYI	RGATCY	2 cut(s)	135, 476
BsuRI	GGCC	3 cut(s)	197, 500, 586
BtgI	CCRYGG	1 cut(s)	489
BtsCI	GGATG	1 cut(s)	286
BtsIMutI	CAGTG	3 cut(s)	33, 45, 180
Cac8I	GCNNGC	2 cut(s)	199, 578
CaiI	CAGNNNCTG	1 cut(s)	473
CciI	TCATGA	1 cut(s)	310
Cfr10I	RCCGGY	1 cut(s)	255
Cfr13I	GGNCC	1 cut(s)	536
CseI	GACGC	1 cut(s)	398
Csp6I	GTAC	1 cut(s)	511
CviAII	CATG	7 cut(s)	222, 311, 490, 508, 553, 619, 742
CviQI	GTAC	1 cut(s)	511
DdeI	CTNAG	4 cut(s)	132, 581, 816, 849
DpnI	GATC	4 cut(s)	137, 315, 478, 549
DpnII	GATC	4 cut(s)	135, 313, 476, 547
DrdI	GACNNNNNNGTC	1 cut(s)	431
DseDI	GACNNNNNNGTC	1 cut(s)	431
EaeI	YGGCCR	1 cut(s)	195
Eco130I	CCWWGG	3 cut(s)	109, 234, 489
Eco147I	AGGCCT	2 cut(s)	500, 586
Eco47I	GGWCC	1 cut(s)	536
EcoT14I	CCWWGG	3 cut(s)	109, 234, 489
ErhI	CCWWGG	3 cut(s)	109, 234, 489
FaeI	CATG	7 cut(s)	225, 314, 493, 511, 556, 622, 745
FalI	AAGNNNNNCTT	2 cut(s)	560, 592
FatI	CATG	7 cut(s)	221, 310, 489, 507, 552, 618, 741
FokI	GGATG	1 cut(s)	273
HaeIII	GGCC	3 cut(s)	197, 500, 586
HapII	CCGG	1 cut(s)	256
HgaI	GACGC	1 cut(s)	398
Hin1II	CATG	7 cut(s)	225, 314, 493, 511, 556, 622, 745
HindIII	AAGCTT	1 cut(s)	722
HinfI	GANTC	2 cut(s)	470, 909
HpaII	CCGG	1 cut(s)	256
HphI	GGTGA	3 cut(s)	86, 837, 844
Hpy166II	GTNNAC	2 cut(s)	45, 835
Hpy188I	TCNGA	1 cut(s)	388
Hpy188III	TCNNGA	3 cut(s)	311, 474, 604
Hpy8I	GTNNAC	2 cut(s)	45, 835
HpyAV	CCTTC	3 cut(s)	101, 562, 616
HpyCH4III	ACNGT	1 cut(s)	263
HpyCH4V	TGCA	4 cut(s)	45, 411, 516, 719
HpyF10VI	GCNNNNNNNGC	1 cut(s)	120
HpyF3I	CTNAG	4 cut(s)	132, 581, 816, 849
Hsp92II	CATG	7 cut(s)	225, 314, 493, 511, 556, 622, 745
Kzo9I	GATC	4 cut(s)	135, 313, 476, 547
LpnPI	CCDG	8 cut(s)	137, 198, 211, 269, 459, 480, 815, 885
LweI	GCATC	1 cut(s)	622
MaeIII	GTNAC	1 cut(s)	843
MalI	GATC	4 cut(s)	137, 315, 478, 549
MboI	GATC	4 cut(s)	135, 313, 476, 547
MboII	GAAGA	5 cut(s)	29, 638, 757, 765, 893
MflI	RGATCY	2 cut(s)	135, 476
MhlI	GDGCHC	1 cut(s)	47
MlsI	TGGCCA	1 cut(s)	197
MluCI	AATT	6 cut(s)	298, 370, 382, 749, 765, 784
MluNI	TGGCCA	1 cut(s)	197
MmeI	TCCRAC	1 cut(s)	62
Mox20I	TGGCCA	1 cut(s)	197
MscI	TGGCCA	1 cut(s)	197
MseI	TTAA	2 cut(s)	453, 759
MslI	CAYNNNNRTG	1 cut(s)	191
Msp20I	TGGCCA	1 cut(s)	197
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	1 cut(s)	256
Mva1269I	GAATGC	1 cut(s)	201
MwoI	GCNNNNNNNGC	1 cut(s)	120
NcoI	CCATGG	1 cut(s)	489
NdeII	GATC	4 cut(s)	135, 313, 476, 547
NlaIII	CATG	7 cut(s)	225, 314, 493, 511, 556, 622, 745
NlaIV	GGNNCC	5 cut(s)	6, 122, 217, 260, 478
NmuCI	GTSAC	1 cut(s)	843
NspI	RCATGY	2 cut(s)	511, 556
NspV	TTCGAA	1 cut(s)	251
PagI	TCATGA	1 cut(s)	310
PceI	AGGCCT	2 cut(s)	500, 586
PciI	ACATGT	1 cut(s)	507
PctI	GAATGC	1 cut(s)	201
PfeI	GAWTC	2 cut(s)	470, 909
PflMI	CCANNNNNTGG	1 cut(s)	473
PscI	ACATGT	1 cut(s)	507
PspN4I	GGNNCC	5 cut(s)	6, 122, 217, 260, 478
PspPI	GGNCC	1 cut(s)	536
PstI	CTGCAG	1 cut(s)	413
PstNI	CAGNNNCTG	1 cut(s)	473
PsuI	RGATCY	2 cut(s)	135, 476
PvuII	CAGCTG	1 cut(s)	131
RsaI	GTAC	1 cut(s)	512
RsaNI	GTAC	1 cut(s)	511
RseI	CAYNNNNRTG	1 cut(s)	191
SaqAI	TTAA	2 cut(s)	453, 759
Sau3AI	GATC	4 cut(s)	135, 313, 476, 547
Sau96I	GGNCC	1 cut(s)	536
SduI	GDGCHC	1 cut(s)	47
SfaNI	GCATC	1 cut(s)	622
SfcI	CTRYAG	1 cut(s)	409
SfuI	TTCGAA	1 cut(s)	251
SinI	GGWCC	1 cut(s)	536
SmiMI	CAYNNNNRTG	1 cut(s)	191
Sse9I	AATT	6 cut(s)	298, 370, 382, 749, 765, 784
SseBI	AGGCCT	2 cut(s)	500, 586
StuI	AGGCCT	2 cut(s)	500, 586
StyI	CCWWGG	3 cut(s)	109, 234, 489
TaaI	ACNGT	1 cut(s)	263
TaqI	TCGA	1 cut(s)	251
TasI	AATT	6 cut(s)	298, 370, 382, 749, 765, 784
TatI	WGTACW	1 cut(s)	510
TfiI	GAWTC	2 cut(s)	470, 909
Tru1I	TTAA	2 cut(s)	453, 759
Tru9I	TTAA	2 cut(s)	453, 759
TscAI	CASTG	3 cut(s)	40, 52, 187
TseFI	GTSAC	1 cut(s)	843
Tsp45I	GTSAC	1 cut(s)	843
TspDTI	ATGAA	3 cut(s)	351, 635, 758
TspRI	CASTG	3 cut(s)	40, 52, 187
Van91I	CCANNNNNTGG	1 cut(s)	473
VneI	GTGCAC	1 cut(s)	43
VpaK11BI	GGWCC	1 cut(s)	536
XapI	RAATTY	3 cut(s)	370, 382, 784
XceI	RCATGY	2 cut(s)	511, 556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.