AT5G10420

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000476
Physical Location & Seq
Reverse (-)
3273393 .. 3276535
3143 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G10420.1

Sequence Viewer

Length: 1470 bp
ATGGATAAGAAAAGTGGTGGAACTAAAGCAATAGAAGAAGCAACCGTTCCACTGTTGGAATGTCATAATGCGGCAGAGGAAGGCGGAGGAATGAAGAGAGAAATATGGATAGAGACTAAGAAGATATGGTATATTGTTGGACCGTCGATATTTACTGGACTCGCTACTTACTCGATCCTCATCATTACTCAAGCCTTCGCTGGCCACCTTGGTGATCTTGAACTCGCTGCCATCTCCATTATCAACAACTTCACACTCGGCTTCAACTACGGTTTACTCCTTGGGATGGCGAGTGCGTTAGAAACGTTATGCGGTCAAGCGTTCGGGGCAAGGGAATATTACATGTTGGGAGTGTATATGCAACGATATTGGATCATTCTATTCTTATGTTGCATCTTGCTTCTTCCTATGTACTTATTCGCGACGCCAATTCTTAAGTTTATTGGTCAGAGTGACGACATTGCCGAGCTTACAGGGACCATTGCCCTTTGGGTCATCCCCGTCCACTTCGCCTTTGCCTTCTTTTTCCCTCTCAACCGATTCCTACAATGTCAGCTCAAGAACAAGGTGATTGCAATTTCAGCTGGAGTGTCACTTGCGGTTCATATTCTCGTGTGTTGGTTCTTCGTCTATGGTTATAAACTCGGAATCATAGGGACTATGGCTAGTGTGAACGTGCCATGGTGGTTGAACATCTTCATCTTATTTTTGTACAGCACACGTGGTGGTTGTACACTCACTTGGACCGGCTTCTCCTCAGAAGCTTTCACCGGACTTTTAGAATTAACAAAACTCTCTGCCTCTTCCGGAATCATGCTTTGCTTAGAGAATTGGTACTATAAAATACTAATGCTGATGACCGGGAACCTAGTAAATGCGAAAATTGCTGTGGACTCCTTATCAATATGCATGTCGGTAAATGGTTGGGAGATGATGATTCCACTTGCCTTCTTCGCGGGAACCGGAGTTCGAGTGGCAAACGAACTAGGAGCTGGTAATGGCAAAGGGGCAAGATTTGCAACGATTGTTTCAATCACACTATCGTTAATGATTGGATTATTCTTCACAGTCATCATTGTAATTTTTCACGACCAAATCGGCTCGATCTTTTCGTCAAGTGAAGCTGTCCTAAACGCAGTCGATAATCTTTCTGTTCTCTTAGCCTTCACGGTTCTTCTCAATAGTGTGCAACCAGTTCTTTCCGGTGTTGCTGTTGGTTCGGGTTGGCAATCGTACGTGGCATATATTAATTTGGGATGTTACTACCTTATCGGGCTTCCGTTTGGGCTTACTATGGGCTGGATTTTCAAATTTGGAGTCAAGGGAATATGGGCCGGTATGATATTTGGAGGAACCGCAATTCAAACGTTGATATTGATTATCATCACTACAAGATGTGACTGGGACAATGAGGCACATAAATCAAGTGTGCGCATTAAAAAATGGTTGGTCTCGGACGCAGGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

489

Amino Acids

53.59

Weight (kDa)

6.97

Isoelectric Point (pI)

29.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 48 - 207 7.6e-31 MatE
MatE PF01554 270 - 429 9.2e-28 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 639
Acc16I TGCGCA 1 cut(s) 1433
AccII CGCG 2 cut(s) 422, 956
AccIII TCCGGA 1 cut(s) 806
AciI CCGC 6 cut(s) 71, 84, 312, 599, 956, 1356
AclI AACGTT 2 cut(s) 305, 1367
AclWI GGATC 2 cut(s) 169, 380
AcoI YGGCCR 1 cut(s) 202
AcsI RAATTY 1 cut(s) 1310
AcvI CACGTG 1 cut(s) 722
AcyI GRCGYC 1 cut(s) 425
AdeI CACNNNGTG 1 cut(s) 725
AfaI GTAC 5 cut(s) 413, 713, 733, 836, 1235
AfiI CCNNNNNNNGG 1 cut(s) 286
AflII CTTAAG 1 cut(s) 434
AflIII ACRYGT 2 cut(s) 342, 719
AgsI TTSAA 6 cut(s) 221, 265, 691, 1032, 1309, 1364
AleI CACNNNNGTG 1 cut(s) 210
AloI GAACNNNNNNTCC 2 cut(s) 951, 983
AluBI AGCT 6 cut(s) 469, 556, 584, 764, 992, 1124
AluI AGCT 6 cut(s) 469, 556, 584, 764, 992, 1124
Alw26I GTCTC 2 cut(s) 107, 1456
AlwI GGATC 2 cut(s) 169, 380
Aor13HI TCCGGA 1 cut(s) 806
AoxI GGCC 2 cut(s) 202, 1332
ApeKI GCWGC 1 cut(s) 227
ApoI RAATTY 1 cut(s) 1310
ArsI GACNNNNNNTTYG 2 cut(s) 1302, 1334
AseI ATTAAT 1 cut(s) 1248
Asp700I GAANNNNTTC 1 cut(s) 695
AspLEI GCGC 1 cut(s) 1434
AspS9I GGNCC 4 cut(s) 140, 477, 744, 1332
AsuC2I CCSGG 1 cut(s) 862
AsuHPI GGTGA 3 cut(s) 224, 580, 760
AvaII GGWCC 3 cut(s) 140, 477, 744
BalI TGGCCA 1 cut(s) 204
BauI CACGAG 1 cut(s) 611
BbrPI CACGTG 1 cut(s) 722
BbvI GCAGC 1 cut(s) 214
BccI CCATC 2 cut(s) 239, 280
BcnI CCSGG 1 cut(s) 862
BcoDI GTCTC 2 cut(s) 107, 1456
BfaI CTAG 3 cut(s) 666, 869, 986
BfrI CTTAAG 1 cut(s) 434
BisI GCNGC 2 cut(s) 72, 228
BlsI GCNGC 2 cut(s) 73, 229
Bme1390I CCNGG 1 cut(s) 862
Bme18I GGWCC 3 cut(s) 140, 477, 744
BmgT120I GGNCC 4 cut(s) 140, 477, 744, 1332
BmiI GGNNCC 4 cut(s) 478, 866, 961, 1354
BmrFI CCNGG 1 cut(s) 862
BmrI ACTGGG 1 cut(s) 1411
BmsI GCATC 1 cut(s) 402
BmuI ACTGGG 1 cut(s) 1411
BpmI CTGGAG 1 cut(s) 606
BpuEI CTTGAG 2 cut(s) 174, 542
BpuMI CCSGG 1 cut(s) 862
BsaAI YACGTR 2 cut(s) 722, 1237
BsaBI GATNNNNATC 2 cut(s) 179, 1382
BsaHI GRCGYC 1 cut(s) 425
BsaI GGTCTC 1 cut(s) 1456
BsaJI CCNNGG 3 cut(s) 208, 280, 680
BsaWI WCCGGW 4 cut(s) 770, 806, 962, 1202
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 1 cut(s) 286
Bse118I RCCGGY 2 cut(s) 746, 1334
Bse1I ACTGG 3 cut(s) 160, 1193, 1406
Bse3DI GCAATG 2 cut(s) 459, 480
Bse8I GATNNNNATC 2 cut(s) 179, 1382
BseAI TCCGGA 1 cut(s) 806
BseDI CCNNGG 3 cut(s) 208, 280, 680
BseGI GGATG 3 cut(s) 291, 495, 1262
BseJI GATNNNNATC 2 cut(s) 179, 1382
BseLI CCNNNNNNNGG 1 cut(s) 286
BseMI GCAATG 2 cut(s) 459, 480
BseMII CTCAG 1 cut(s) 771
BseNI ACTGG 3 cut(s) 160, 1193, 1406
BseRI GAGGAG 1 cut(s) 745
BseXI GCAGC 1 cut(s) 214
Bsh1236I CGCG 2 cut(s) 422, 956
BshFI GGCC 2 cut(s) 204, 1334
BsiSI CCGG 7 cut(s) 747, 771, 807, 861, 963, 1203, 1335
BsiWI CGTACG 1 cut(s) 1233
BslFI GGGAC 3 cut(s) 490, 670, 1418
BslI CCNNNNNNNGG 1 cut(s) 286
BsmAI GTCTC 2 cut(s) 107, 1456
BsmFI GGGAC 3 cut(s) 490, 670, 1418
BsnI GGCC 2 cut(s) 204, 1334
Bso31I GGTCTC 1 cut(s) 1456
Bsp13I TCCGGA 1 cut(s) 806
Bsp1407I TGTACA 2 cut(s) 711, 731
Bsp143I GATC 4 cut(s) 174, 214, 372, 1104
Bsp19I CCATGG 1 cut(s) 680
Bsp68I TCGCGA 1 cut(s) 422
BspACI CCGC 6 cut(s) 71, 84, 312, 599, 956, 1356
BspANI GGCC 2 cut(s) 204, 1334
BspCNI CTCAG 1 cut(s) 770
BspEI TCCGGA 1 cut(s) 806
BspFNI CGCG 2 cut(s) 422, 956
BspLI GGNNCC 4 cut(s) 478, 866, 961, 1354
BspPI GGATC 2 cut(s) 169, 380
BspTI CTTAAG 1 cut(s) 434
BspTNI GGTCTC 1 cut(s) 1456
BsrDI GCAATG 2 cut(s) 459, 480
BsrFI RCCGGY 2 cut(s) 746, 1334
BsrGI TGTACA 2 cut(s) 711, 731
BsrI ACTGG 3 cut(s) 160, 1193, 1406
BssAI RCCGGY 2 cut(s) 746, 1334
BssECI CCNNGG 3 cut(s) 208, 280, 680
BssMI GATC 4 cut(s) 174, 214, 372, 1104
BssNI GRCGYC 1 cut(s) 425
BssSI CACGAG 1 cut(s) 611
BssT1I CCWWGG 3 cut(s) 208, 280, 680
Bst2BI CACGAG 1 cut(s) 611
Bst4CI ACNGT 6 cut(s) 46, 54, 144, 272, 1069, 1171
Bst6I CTCTTC 2 cut(s) 89, 808
BstACI GRCGYC 1 cut(s) 425
BstAFI CTTAAG 1 cut(s) 434
BstAPI GCANNNNNTGC 1 cut(s) 1016
BstAUI TGTACA 2 cut(s) 711, 731
BstBAI YACGTR 2 cut(s) 722, 1237
BstC8I GCNNGC 1 cut(s) 202
BstDEI CTNAG 4 cut(s) 117, 757, 823, 1159
BstDSI CCRYGG 1 cut(s) 680
BstF5I GGATG 3 cut(s) 291, 495, 1262
BstFNI CGCG 2 cut(s) 422, 956
BstHHI GCGC 1 cut(s) 1434
BstKTI GATC 4 cut(s) 177, 217, 375, 1107
BstMAI GTCTC 2 cut(s) 107, 1456
BstMBI GATC 4 cut(s) 174, 214, 372, 1104
BstMWI GCNNNNNNNGC 5 cut(s) 326, 581, 884, 953, 1016
BstNSI RCATGY 2 cut(s) 346, 913
BstSCI CCNGG 1 cut(s) 860
BstUI CGCG 2 cut(s) 422, 956
BstV1I GCAGC 1 cut(s) 214
BsuRI GGCC 2 cut(s) 204, 1334
BtgI CCRYGG 1 cut(s) 680
BtsCI GGATG 3 cut(s) 291, 495, 1262
BtsIMutI CAGTG 1 cut(s) 50
BtuMI TCGCGA 1 cut(s) 422
Cac8I GCNNGC 1 cut(s) 202
CfoI GCGC 1 cut(s) 1434
Cfr10I RCCGGY 2 cut(s) 746, 1334
Cfr13I GGNCC 4 cut(s) 140, 477, 744, 1332
CseI GACGC 1 cut(s) 433
Csp6I GTAC 5 cut(s) 412, 712, 732, 835, 1234
CviAII CATG 4 cut(s) 343, 681, 814, 910
CviQI GTAC 5 cut(s) 412, 712, 732, 835, 1234
DdeI CTNAG 4 cut(s) 117, 757, 823, 1159
DpnI GATC 4 cut(s) 176, 216, 374, 1106
DpnII GATC 4 cut(s) 174, 214, 372, 1104
DraIII CACNNNGTG 1 cut(s) 725
EaeI YGGCCR 1 cut(s) 202
Eam1104I CTCTTC 2 cut(s) 89, 808
EarI CTCTTC 2 cut(s) 89, 808
EciI GGCGGA 1 cut(s) 99
Eco130I CCWWGG 3 cut(s) 208, 280, 680
Eco31I GGTCTC 1 cut(s) 1456
Eco47I GGWCC 3 cut(s) 140, 477, 744
Eco72I CACGTG 1 cut(s) 722
EcoT14I CCWWGG 3 cut(s) 208, 280, 680
EcoT22I ATGCAT 1 cut(s) 911
ErhI CCWWGG 3 cut(s) 208, 280, 680
FaeI CATG 4 cut(s) 346, 684, 817, 913
FaqI GGGAC 3 cut(s) 490, 670, 1418
FatI CATG 4 cut(s) 342, 680, 813, 909
FauI CCCGC 1 cut(s) 949
Fnu4HI GCNGC 2 cut(s) 72, 228
FokI GGATG 3 cut(s) 298, 482, 1269
Fsp4HI GCNGC 2 cut(s) 72, 228
FspAI RTGCGCAY 1 cut(s) 1433
FspBI CTAG 3 cut(s) 666, 869, 986
FspI TGCGCA 1 cut(s) 1433
GlaI GCGC 1 cut(s) 1433
GluI GCNGC 2 cut(s) 72, 228
GsuI CTGGAG 1 cut(s) 606
HaeIII GGCC 2 cut(s) 204, 1334
HapII CCGG 7 cut(s) 747, 771, 807, 861, 963, 1203, 1335
HgaI GACGC 1 cut(s) 433
HhaI GCGC 1 cut(s) 1434
Hin1I GRCGYC 1 cut(s) 425
Hin1II CATG 4 cut(s) 346, 684, 817, 913
Hin6I GCGC 1 cut(s) 1432
HinP1I GCGC 1 cut(s) 1432
HindIII AAGCTT 1 cut(s) 762
HinfI GANTC 7 cut(s) 159, 540, 648, 810, 893, 937, 1317
HpaII CCGG 7 cut(s) 747, 771, 807, 861, 963, 1203, 1335
HphI GGTGA 3 cut(s) 224, 580, 760
Hpy166II GTNNAC 5 cut(s) 275, 505, 673, 734, 892
Hpy188I TCNGA 4 cut(s) 450, 647, 760, 1456
Hpy188III TCNNGA 5 cut(s) 218, 421, 559, 807, 1088
Hpy8I GTNNAC 5 cut(s) 275, 505, 673, 734, 892
Hpy99I CGWCG 2 cut(s) 148, 427
HpyAV CCTTC 5 cut(s) 74, 205, 529, 958, 1174
HpyCH4III ACNGT 6 cut(s) 46, 54, 144, 272, 1069, 1171
HpyCH4IV ACGT 5 cut(s) 305, 675, 721, 1236, 1367
HpyCH4V TGCA 6 cut(s) 361, 393, 575, 909, 1019, 1189
HpyF10VI GCNNNNNNNGC 5 cut(s) 326, 581, 884, 953, 1016
HpyF3I CTNAG 4 cut(s) 117, 757, 823, 1159
HpySE526I ACGT 5 cut(s) 305, 675, 721, 1236, 1367
Hsp92I GRCGYC 1 cut(s) 425
Hsp92II CATG 4 cut(s) 346, 684, 817, 913
HspAI GCGC 1 cut(s) 1432
Kpn2I TCCGGA 1 cut(s) 806
Kzo9I GATC 4 cut(s) 174, 214, 372, 1104
LmnI GCTCC 1 cut(s) 989
Lsp1109I GCAGC 1 cut(s) 214
LweI GCATC 1 cut(s) 402
MaeI CTAG 3 cut(s) 666, 869, 986
MaeII ACGT 5 cut(s) 305, 675, 721, 1236, 1367
MaeIII GTNAC 4 cut(s) 452, 591, 1259, 1397
MalI GATC 4 cut(s) 176, 216, 374, 1106
MboI GATC 4 cut(s) 174, 214, 372, 1104
MlsI TGGCCA 1 cut(s) 204
MluCI AATT 9 cut(s) 429, 576, 782, 829, 882, 1080, 1249, 1310, 1359
MluNI TGGCCA 1 cut(s) 204
MlyI GAGTC 3 cut(s) 153, 887, 1326
MmeI TCCRAC 2 cut(s) 36, 118
MnlI CCTC 8 cut(s) 70, 80, 188, 540, 766, 811, 1343, 1405
Mox20I TGGCCA 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 911
MroI TCCGGA 1 cut(s) 806
MroXI GAANNNNTTC 1 cut(s) 695
MscI TGGCCA 1 cut(s) 204
MseI TTAA 5 cut(s) 435, 785, 1046, 1248, 1437
MslI CAYNNNNRTG 1 cut(s) 210
Msp20I TGGCCA 1 cut(s) 204
MspA1I CMGCKG 1 cut(s) 584
MspCI CTTAAG 1 cut(s) 434
MspI CCGG 7 cut(s) 747, 771, 807, 861, 963, 1203, 1335
MspR9I CCNGG 1 cut(s) 862
MvnI CGCG 2 cut(s) 422, 956
MwoI GCNNNNNNNGC 5 cut(s) 326, 581, 884, 953, 1016
NciI CCSGG 1 cut(s) 862
NcoI CCATGG 1 cut(s) 680
NdeII GATC 4 cut(s) 174, 214, 372, 1104
NlaIII CATG 4 cut(s) 346, 684, 817, 913
NlaIV GGNNCC 4 cut(s) 478, 866, 961, 1354
NmeAIII GCCGAG 2 cut(s) 237, 490
NmuCI GTSAC 3 cut(s) 452, 591, 1397
NruI TCGCGA 1 cut(s) 422
NsbI TGCGCA 1 cut(s) 1433
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 2 cut(s) 346, 913
OliI CACNNNNGTG 1 cut(s) 210
PciI ACATGT 1 cut(s) 342
PcsI WCGNNNNNNNCGW 2 cut(s) 462, 1109
PdmI GAANNNNTTC 1 cut(s) 695
PfeI GAWTC 4 cut(s) 540, 648, 810, 937
Pfl23II CGTACG 1 cut(s) 1233
PkrI GCNGC 2 cut(s) 73, 229
PleI GAGTC 3 cut(s) 153, 887, 1325
PmaCI CACGTG 1 cut(s) 722
PmlI CACGTG 1 cut(s) 722
PpsI GAGTC 3 cut(s) 153, 887, 1325
Ppu21I YACGTR 2 cut(s) 722, 1237
PscI ACATGT 1 cut(s) 342
PshBI ATTAAT 1 cut(s) 1248
PsiI TTATAA 1 cut(s) 639
Psp1406I AACGTT 2 cut(s) 305, 1367
PspCI CACGTG 1 cut(s) 722
PspLI CGTACG 1 cut(s) 1233
PspN4I GGNNCC 4 cut(s) 478, 866, 961, 1354
PspPI GGNCC 4 cut(s) 140, 477, 744, 1332
PvuII CAGCTG 1 cut(s) 584
RruI TCGCGA 1 cut(s) 422
RsaI GTAC 5 cut(s) 413, 713, 733, 836, 1235
RsaNI GTAC 5 cut(s) 412, 712, 732, 835, 1234
RseI CAYNNNNRTG 1 cut(s) 210
SaqAI TTAA 5 cut(s) 435, 785, 1046, 1248, 1437
SatI GCNGC 2 cut(s) 72, 228
Sau3AI GATC 4 cut(s) 174, 214, 372, 1104
Sau96I GGNCC 4 cut(s) 140, 477, 744, 1332
SchI GAGTC 3 cut(s) 153, 887, 1326
ScrFI CCNGG 1 cut(s) 862
SfaNI GCATC 1 cut(s) 402
SinI GGWCC 3 cut(s) 140, 477, 744
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 3 cut(s) 189, 434, 557
SmoI CTYRAG 3 cut(s) 189, 434, 557
Sse9I AATT 9 cut(s) 429, 576, 782, 829, 882, 1080, 1249, 1310, 1359
SsiI CCGC 6 cut(s) 71, 84, 312, 599, 956, 1356
SspI AATATT 1 cut(s) 338
SspMI CTAG 3 cut(s) 666, 869, 986
StyD4I CCNGG 1 cut(s) 860
StyI CCWWGG 3 cut(s) 208, 280, 680
TaaI ACNGT 6 cut(s) 46, 54, 144, 272, 1069, 1171
TaiI ACGT 5 cut(s) 308, 678, 724, 1239, 1370
TaqI TCGA 5 cut(s) 146, 173, 970, 1103, 1140
TasI AATT 9 cut(s) 429, 576, 782, 829, 882, 1080, 1249, 1310, 1359
TatI WGTACW 3 cut(s) 411, 711, 731
TauI GCSGC 1 cut(s) 74
TfiI GAWTC 4 cut(s) 540, 648, 810, 937
Tru1I TTAA 5 cut(s) 435, 785, 1046, 1248, 1437
Tru9I TTAA 5 cut(s) 435, 785, 1046, 1248, 1437
TscAI CASTG 1 cut(s) 57
TseFI GTSAC 3 cut(s) 452, 591, 1397
TseI GCWGC 1 cut(s) 227
Tsp45I GTSAC 3 cut(s) 452, 591, 1397
TspDTI ATGAA 3 cut(s) 107, 593, 688
TspGWI ACGGA 1 cut(s) 1269
TspRI CASTG 1 cut(s) 57
Vha464I CTTAAG 1 cut(s) 434
VpaK11BI GGWCC 3 cut(s) 140, 477, 744
VspI ATTAAT 1 cut(s) 1248
XapI RAATTY 1 cut(s) 1310
XceI RCATGY 2 cut(s) 346, 913
XmnI GAANNNNTTC 1 cut(s) 695
XspI CTAG 3 cut(s) 666, 869, 986
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.