Rh7AG464900

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000476
Physical Location & Seq
Forward (+)
64187409 .. 64192759
5351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG464900.1

Sequence Viewer

Length: 1467 bp
ATGGACAGGGAAGAAGAAGAAGTTCTGGTTCTTAATCAACCCTTATTACCAGAACCATCAACCAGAAACAGTACACCTGAAGATCTACCTCGTAAAAGCCTTCCATCAAGAGTTTGGATAGAAACCAAGAAACTATGGCGCATCGTGGGCCCCGCTATTGTCTCCCGGCTTGCCGGCTACACCATGACCGTCATTACTCAGGCCTTCGCTGGTCACCTCGGCGACAATGAGCTCGCTGCATTCTCGATCGTCAACAATGTCATCCTCGGCTTCTCATTTGGTCTCCTGTTGGGAATGGCAAGCGCGCTGGAAACTCTGTGTGGGCAAGCTTTTGGGGCCAAAAGGTACCCAATGCTCGGGATTTATCTCCAGAGATCGTGGATCGTGCTGTTCATCTGCTGCGTTGTGCTATCGCCAGTTTACATTTACGCTTCTCCGATTCTGAAACTAATCGGGCAGACAGATGAAGTGGCAGAGCTTTCGGAGGTGGTGTCCCTTTGGATTTTGCCAATGCATTTCAGCTATGCAATTATGTTCCCATTGCAGAGGTTCTTGCAGAGCCAGCTCAAGAACTTTGTGACTTTGTGGATGTCCGTGGTGGTTTTGGTGTTTCATGCCCTGATAAGCTGGATTTTTGTGTATGTTTTGGATTTTGGGCTTGTGGGTGCGGCTGTGACTTTGGATATTTCATGGTGGCTCTTGTGTTTCATGATGCTTGTGTATGTGACTTGTGGTTGGTGTCCGCTGAGTTGGGCAGGTTTGTCAATGGAGGCCTTTTCTGGGCTCTGGGAATTTGTCAAGCTTTCCGCTGCTTCTGGCGTCATGCTCTGCTTGGAATTTTGGTATTACAGAGTTTTGATATTGATGACCGGATTCTTATCGGATGCGACTCTTGCTGTTGATGCCTTATCAGTTTGCATGACTGTAAATGGGTGGGAGCTCATGATTCATTTAGGTTTCTTGGCTGGAGTCGGAGTAAGGGTAGCAAATGAGCTCGGAGCTGGAAATGGTCCGGGAGCAAAGTTTGCAACCAAGGTTGCAGTGGCTGAATCGAGCTTCATCTCCCTTTTCTTCTGTGTACTCATTATCGCCTTACATGACAAGTTCGCATACATCTTCACATCAAGCACTACTGTCCTCCAAGCAGTTGATCACTTGTCTTACCTCTTGGCTGTCACCATTTTACTTAACGGGGTTCAACCCGTTTTGTCAGGCGTAGCTGTTGGCTCAGGATGGCAAGCATGGGTGGCATACGTAAATCTTTTCTGCTACTACATTGTTGGGCTCCCACTTGGAATAGTATTGGCATGGGTTGCTGACTATGGTGTTTTGGGTCTATGGTCTGGGATGATCCTTGGTGGAACTCTTATACAAACTGTGATTTTGGCTATCATCACAGCACGACGTGATTGGGAAAATGAGGTACAAACTCGTGAACACTCACTATACAGTCATCGAATTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

488

Amino Acids

54.04

Weight (kDa)

5.51

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 51 - 211 3.7e-30 MatE
MatE PF01554 273 - 433 7.4e-24 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 746
Acc65I GGTACC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 345
AccII CGCG 1 cut(s) 305
AciI CCGC 4 cut(s) 153, 668, 743, 807
AclWI GGATC 2 cut(s) 389, 1345
AcsI RAATTY 3 cut(s) 791, 836, 1458
AcuI CTGAAG 1 cut(s) 99
AcyI GRCGYC 1 cut(s) 819
AdeI CACNNNGTG 1 cut(s) 1406
AfaI GTAC 4 cut(s) 73, 347, 1080, 1425
AfiI CCNNNNNNNGG 2 cut(s) 356, 780
AgsI TTSAA 1 cut(s) 1199
AjiI CACGTC 1 cut(s) 1406
Alw21I GWGCWC 3 cut(s) 234, 942, 996
Alw26I GTCTC 2 cut(s) 166, 287
AlwI GGATC 2 cut(s) 389, 1345
AlwNI CAGNNNCTG 1 cut(s) 1046
Ama87I CYCGRG 1 cut(s) 356
AoxI GGCC 4 cut(s) 148, 201, 336, 771
ApaI GGGCCC 1 cut(s) 152
ApeKI GCWGC 3 cut(s) 236, 399, 809
ApoI RAATTY 3 cut(s) 791, 836, 1458
Asp700I GAANNNNTTC 1 cut(s) 21
Asp718I GGTACC 1 cut(s) 345
AspLEI GCGC 3 cut(s) 141, 305, 307
AspS9I GGNCC 4 cut(s) 148, 149, 336, 1010
AsuC2I CCSGG 2 cut(s) 166, 1014
AsuHPI GGTGA 2 cut(s) 206, 1168
AvaI CYCGRG 1 cut(s) 356
AvaII GGWCC 1 cut(s) 1010
BaeGI GKGCMC 1 cut(s) 152
BanI GGYRCC 1 cut(s) 345
BanII GRGCYC 6 cut(s) 152, 234, 786, 942, 996, 1287
BauI CACGAG 1 cut(s) 1431
Bbv12I GWGCWC 3 cut(s) 234, 942, 996
BbvI GCAGC 3 cut(s) 223, 386, 796
BccI CCATC 3 cut(s) 64, 112, 1227
BcgI CGANNNNNNTGC 2 cut(s) 462, 496
BclI TGATCA 1 cut(s) 1150
BcnI CCSGG 2 cut(s) 166, 1014
BcoDI GTCTC 2 cut(s) 166, 287
BfuAI ACCTGC 1 cut(s) 746
BglII AGATCT 1 cut(s) 82
BisI GCNGC 4 cut(s) 237, 400, 669, 810
BlsI GCNGC 4 cut(s) 238, 401, 670, 811
Bme1390I CCNGG 2 cut(s) 166, 1014
Bme18I GGWCC 1 cut(s) 1010
BmeT110I CYCGRG 1 cut(s) 356
BmgBI CACGTC 1 cut(s) 1406
BmgT120I GGNCC 4 cut(s) 148, 149, 336, 1010
BmiI GGNNCC 5 cut(s) 150, 151, 337, 347, 1286
BmrFI CCNGG 2 cut(s) 166, 1014
BmsI GCATC 4 cut(s) 150, 702, 874, 892
BpmI CTGGAG 2 cut(s) 353, 987
Bpu10I CCTNAGC 1 cut(s) 1228
BpuEI CTTGAG 1 cut(s) 551
BpuMI CCSGG 2 cut(s) 166, 1014
BsaAI YACGTR 1 cut(s) 1255
BsaBI GATNNNNATC 1 cut(s) 877
BsaHI GRCGYC 1 cut(s) 819
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 5 cut(s) 217, 265, 594, 1032, 1354
BsaWI WCCGGW 1 cut(s) 869
BsaXI ACNNNNNCTCC 6 cut(s) 476, 506, 960, 966, 990, 996
Bsc4I CCNNNNNNNGG 2 cut(s) 356, 780
Bse118I RCCGGY 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 416
Bse3DI GCAATG 1 cut(s) 539
Bse8I GATNNNNATC 1 cut(s) 877
BseDI CCNNGG 5 cut(s) 217, 265, 594, 1032, 1354
BseGI GGATG 5 cut(s) 261, 594, 889, 1238, 1353
BseJI GATNNNNATC 1 cut(s) 877
BseLI CCNNNNNNNGG 2 cut(s) 356, 780
BseMI GCAATG 1 cut(s) 539
BseMII CTCAG 3 cut(s) 212, 737, 1242
BseNI ACTGG 1 cut(s) 416
BsePI GCGCGC 1 cut(s) 303
BseSI GKGCMC 1 cut(s) 152
BseXI GCAGC 3 cut(s) 223, 386, 796
Bsh1236I CGCG 1 cut(s) 305
Bsh1285I CGRYCG 1 cut(s) 249
BshFI GGCC 4 cut(s) 150, 203, 338, 773
BshNI GGYRCC 1 cut(s) 345
BsiEI CGRYCG 1 cut(s) 249
BsiHKAI GWGCWC 3 cut(s) 234, 942, 996
BsiHKCI CYCGRG 1 cut(s) 356
BsiSI CCGG 4 cut(s) 166, 174, 870, 1013
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 2 cut(s) 356, 780
BsmAI GTCTC 2 cut(s) 166, 287
BsmFI GGGAC 1 cut(s) 478
BsmI GAATGC 1 cut(s) 239
BsnI GGCC 4 cut(s) 150, 203, 338, 773
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 1 cut(s) 356
Bsp120I GGGCCC 1 cut(s) 148
Bsp1286I GDGCHC 6 cut(s) 152, 234, 786, 942, 996, 1287
Bsp143I GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
BspACI CCGC 4 cut(s) 153, 668, 743, 807
BspANI GGCC 4 cut(s) 150, 203, 338, 773
BspCNI CTCAG 3 cut(s) 211, 738, 1241
BspFNI CGCG 1 cut(s) 305
BspHI TCATGA 2 cut(s) 708, 942
BspLI GGNNCC 5 cut(s) 150, 151, 337, 347, 1286
BspMI ACCTGC 1 cut(s) 746
BspPI GGATC 2 cut(s) 389, 1345
BspT107I GGYRCC 1 cut(s) 345
BspTNI GGTCTC 1 cut(s) 287
BsrDI GCAATG 1 cut(s) 539
BsrFI RCCGGY 1 cut(s) 173
BsrI ACTGG 1 cut(s) 416
BssAI RCCGGY 1 cut(s) 173
BssECI CCNNGG 5 cut(s) 217, 265, 594, 1032, 1354
BssHII GCGCGC 1 cut(s) 303
BssMI GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
BssNI GRCGYC 1 cut(s) 819
BssSI CACGAG 1 cut(s) 1431
BssT1I CCWWGG 2 cut(s) 1032, 1354
Bst2BI CACGAG 1 cut(s) 1431
Bst4CI ACNGT 6 cut(s) 71, 190, 925, 1135, 1378, 1451
BstACI GRCGYC 1 cut(s) 819
BstAPI GCANNNNNTGC 2 cut(s) 1025, 1313
BstBAI YACGTR 1 cut(s) 1255
BstC8I GCNNGC 8 cut(s) 171, 175, 234, 301, 305, 327, 563, 1239
BstDEI CTNAG 3 cut(s) 198, 746, 1228
BstDSI CCRYGG 1 cut(s) 594
BstEII GGTNACC 1 cut(s) 212
BstF5I GGATG 5 cut(s) 261, 594, 889, 1238, 1353
BstFNI CGCG 1 cut(s) 305
BstHHI GCGC 3 cut(s) 141, 305, 307
BstKTI GATC 6 cut(s) 85, 249, 377, 384, 1153, 1353
BstMAI GTCTC 2 cut(s) 166, 287
BstMBI GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
BstMCI CGRYCG 1 cut(s) 249
BstMWI GCNNNNNNNGC 8 cut(s) 147, 335, 562, 893, 902, 1025, 1247, 1313
BstPI GGTNACC 1 cut(s) 212
BstSCI CCNGG 2 cut(s) 164, 1012
BstSLI GKGCMC 1 cut(s) 152
BstSNI TACGTA 1 cut(s) 1255
BstUI CGCG 1 cut(s) 305
BstV1I GCAGC 3 cut(s) 223, 386, 796
BstX2I RGATCY 1 cut(s) 82
BstYI RGATCY 1 cut(s) 82
BsuRI GGCC 4 cut(s) 150, 203, 338, 773
BtgI CCRYGG 1 cut(s) 594
BtrI CACGTC 1 cut(s) 1406
BtsCI GGATG 5 cut(s) 261, 594, 889, 1238, 1353
BtsI GCAGTG 1 cut(s) 1047
BtsIMutI CAGTG 1 cut(s) 1047
BveI ACCTGC 1 cut(s) 746
Cac8I GCNNGC 8 cut(s) 171, 175, 234, 301, 305, 327, 563, 1239
CaiI CAGNNNCTG 1 cut(s) 1046
CciI TCATGA 2 cut(s) 708, 942
CfoI GCGC 3 cut(s) 141, 305, 307
Cfr10I RCCGGY 1 cut(s) 173
Cfr13I GGNCC 4 cut(s) 148, 149, 336, 1010
CseI GACGC 1 cut(s) 808
Csp6I GTAC 4 cut(s) 72, 346, 1079, 1424
CviQI GTAC 4 cut(s) 72, 346, 1079, 1424
DdeI CTNAG 3 cut(s) 198, 746, 1228
DpnI GATC 6 cut(s) 84, 248, 376, 383, 1152, 1352
DpnII GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
DraIII CACNNNGTG 1 cut(s) 1406
Ecl136II GAGCTC 3 cut(s) 232, 940, 994
Eco105I TACGTA 1 cut(s) 1255
Eco130I CCWWGG 2 cut(s) 1032, 1354
Eco147I AGGCCT 2 cut(s) 203, 773
Eco24I GRGCYC 6 cut(s) 152, 234, 786, 942, 996, 1287
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 1 cut(s) 1010
Eco53kI GAGCTC 3 cut(s) 232, 940, 994
Eco57I CTGAAG 1 cut(s) 99
Eco88I CYCGRG 1 cut(s) 356
Eco91I GGTNACC 1 cut(s) 212
EcoICRI GAGCTC 3 cut(s) 232, 940, 994
EcoO109I RGGNCCY 1 cut(s) 149
EcoO65I GGTNACC 1 cut(s) 212
EcoT14I CCWWGG 2 cut(s) 1032, 1354
EcoT22I ATGCAT 1 cut(s) 516
EcoT38I GRGCYC 6 cut(s) 152, 234, 786, 942, 996, 1287
ErhI CCWWGG 2 cut(s) 1032, 1354
FaqI GGGAC 1 cut(s) 478
FauI CCCGC 1 cut(s) 160
FbaI TGATCA 1 cut(s) 1150
Fnu4HI GCNGC 4 cut(s) 237, 400, 669, 810
FokI GGATG 5 cut(s) 248, 601, 896, 1245, 1360
FriOI GRGCYC 6 cut(s) 152, 234, 786, 942, 996, 1287
Fsp4HI GCNGC 4 cut(s) 237, 400, 669, 810
GlaI GCGC 3 cut(s) 140, 304, 306
GluI GCNGC 4 cut(s) 237, 400, 669, 810
GsuI CTGGAG 2 cut(s) 353, 987
HaeIII GGCC 4 cut(s) 150, 203, 338, 773
HapII CCGG 4 cut(s) 166, 174, 870, 1013
HgaI GACGC 1 cut(s) 808
HhaI GCGC 3 cut(s) 141, 305, 307
Hin1I GRCGYC 1 cut(s) 819
Hin6I GCGC 3 cut(s) 139, 303, 305
HinP1I GCGC 3 cut(s) 139, 303, 305
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HindIII AAGCTT 2 cut(s) 327, 800
HinfI GANTC 6 cut(s) 439, 873, 889, 946, 969, 1049
HpaII CCGG 4 cut(s) 166, 174, 870, 1013
HphI GGTGA 2 cut(s) 206, 1168
Hpy166II GTNNAC 5 cut(s) 74, 253, 421, 1079, 1436
Hpy188I TCNGA 6 cut(s) 438, 444, 484, 883, 974, 998
Hpy188III TCNNGA 9 cut(s) 108, 244, 358, 370, 568, 709, 943, 1230, 1433
Hpy8I GTNNAC 5 cut(s) 74, 253, 421, 1079, 1436
Hpy99I CGWCG 1 cut(s) 1407
HpyAV CCTTC 2 cut(s) 110, 214
HpyCH4III ACNGT 6 cut(s) 71, 190, 925, 1135, 1378, 1451
HpyCH4IV ACGT 2 cut(s) 1254, 1405
HpyCH4V TGCA 8 cut(s) 239, 514, 527, 544, 556, 918, 1028, 1040
HpyF10VI GCNNNNNNNGC 8 cut(s) 147, 335, 562, 893, 902, 1025, 1247, 1313
HpyF3I CTNAG 3 cut(s) 198, 746, 1228
HpySE526I ACGT 2 cut(s) 1254, 1405
Hsp92I GRCGYC 1 cut(s) 819
HspAI GCGC 3 cut(s) 139, 303, 305
KpnI GGTACC 1 cut(s) 349
KroI GCCGGC 1 cut(s) 173
KroNI GCCGGC 1 cut(s) 175
Ksp22I TGATCA 1 cut(s) 1150
Kzo9I GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
LmnI GCTCC 4 cut(s) 937, 998, 1016, 1290
Lsp1109I GCAGC 3 cut(s) 223, 386, 796
LweI GCATC 4 cut(s) 150, 702, 874, 892
MaeII ACGT 2 cut(s) 1254, 1405
MaeIII GTNAC 5 cut(s) 212, 577, 673, 724, 1174
MalI GATC 6 cut(s) 84, 248, 376, 383, 1152, 1352
MboI GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
MboII GAAGA 6 cut(s) 23, 26, 29, 92, 1063, 1108
MflI RGATCY 1 cut(s) 82
MhlI GDGCHC 6 cut(s) 152, 234, 786, 942, 996, 1287
MluCI AATT 4 cut(s) 528, 791, 836, 1458
MlyI GAGTC 2 cut(s) 883, 978
MmeI TCCRAC 1 cut(s) 952
MnlI CCTC 9 cut(s) 99, 227, 275, 478, 540, 763, 1148, 1175, 1414
Mph1103I ATGCAT 1 cut(s) 516
MroNI GCCGGC 1 cut(s) 173
MroXI GAANNNNTTC 1 cut(s) 21
MseI TTAA 3 cut(s) 33, 1188, 1465
MspA1I CMGCKG 2 cut(s) 745, 809
MspI CCGG 4 cut(s) 166, 174, 870, 1013
MspR9I CCNGG 2 cut(s) 166, 1014
Mva1269I GAATGC 1 cut(s) 239
MvnI CGCG 1 cut(s) 305
MwoI GCNNNNNNNGC 8 cut(s) 147, 335, 562, 893, 902, 1025, 1247, 1313
NaeI GCCGGC 1 cut(s) 175
NciI CCSGG 2 cut(s) 166, 1014
NdeII GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
NgoMIV GCCGGC 1 cut(s) 173
NlaIV GGNNCC 5 cut(s) 150, 151, 337, 347, 1286
NmeAIII GCCGAG 2 cut(s) 198, 246
NmuCI GTSAC 5 cut(s) 212, 577, 673, 724, 1174
NsiI ATGCAT 1 cut(s) 516
PagI TCATGA 2 cut(s) 708, 942
PauI GCGCGC 1 cut(s) 303
PceI AGGCCT 2 cut(s) 203, 773
PctI GAATGC 1 cut(s) 239
PdiI GCCGGC 1 cut(s) 175
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 4 cut(s) 439, 873, 946, 1049
PfoI TCCNGGA 1 cut(s) 1012
PkrI GCNGC 4 cut(s) 238, 401, 670, 811
Ple19I CGATCG 1 cut(s) 249
PleI GAGTC 2 cut(s) 883, 977
PpsI GAGTC 2 cut(s) 883, 977
Ppu21I YACGTR 1 cut(s) 1255
Psp124BI GAGCTC 3 cut(s) 234, 942, 996
PspEI GGTNACC 1 cut(s) 212
PspN4I GGNNCC 5 cut(s) 150, 151, 337, 347, 1286
PspOMI GGGCCC 1 cut(s) 148
PspPI GGNCC 4 cut(s) 148, 149, 336, 1010
PstNI CAGNNNCTG 1 cut(s) 1046
PsuI RGATCY 1 cut(s) 82
PteI GCGCGC 1 cut(s) 303
PvuI CGATCG 1 cut(s) 249
RsaI GTAC 4 cut(s) 73, 347, 1080, 1425
RsaNI GTAC 4 cut(s) 72, 346, 1079, 1424
SacI GAGCTC 3 cut(s) 234, 942, 996
SaqAI TTAA 3 cut(s) 33, 1188, 1465
SatI GCNGC 4 cut(s) 237, 400, 669, 810
Sau3AI GATC 6 cut(s) 82, 246, 374, 381, 1150, 1350
Sau96I GGNCC 4 cut(s) 148, 149, 336, 1010
SchI GAGTC 2 cut(s) 883, 978
ScrFI CCNGG 2 cut(s) 166, 1014
SduI GDGCHC 6 cut(s) 152, 234, 786, 942, 996, 1287
SfaNI GCATC 4 cut(s) 150, 702, 874, 892
SinI GGWCC 1 cut(s) 1010
SmlI CTYRAG 1 cut(s) 566
SmoI CTYRAG 1 cut(s) 566
SnaBI TACGTA 1 cut(s) 1255
Sse9I AATT 4 cut(s) 528, 791, 836, 1458
SseBI AGGCCT 2 cut(s) 203, 773
SsiI CCGC 4 cut(s) 153, 668, 743, 807
SstI GAGCTC 3 cut(s) 234, 942, 996
StuI AGGCCT 2 cut(s) 203, 773
StyD4I CCNGG 2 cut(s) 164, 1012
StyI CCWWGG 2 cut(s) 1032, 1354
TaaI ACNGT 6 cut(s) 71, 190, 925, 1135, 1378, 1451
TaiI ACGT 2 cut(s) 1257, 1408
TaqI TCGA 3 cut(s) 245, 1052, 1456
TasI AATT 4 cut(s) 528, 791, 836, 1458
TatI WGTACW 2 cut(s) 71, 1078
TauI GCSGC 1 cut(s) 671
TfiI GAWTC 4 cut(s) 439, 873, 946, 1049
Tru1I TTAA 3 cut(s) 33, 1188, 1465
Tru9I TTAA 3 cut(s) 33, 1188, 1465
TscAI CASTG 1 cut(s) 1047
TseFI GTSAC 5 cut(s) 212, 577, 673, 724, 1174
TseI GCWGC 3 cut(s) 236, 399, 809
Tsp45I GTSAC 5 cut(s) 212, 577, 673, 724, 1174
TspDTI ATGAA 7 cut(s) 382, 480, 602, 678, 697, 938, 1048
TspGWI ACGGA 1 cut(s) 583
TspRI CASTG 1 cut(s) 1047
VpaK11BI GGWCC 1 cut(s) 1010
XapI RAATTY 3 cut(s) 791, 836, 1458
XcmI CCANNNNNNNNNTGG 2 cut(s) 111, 1039
XmnI GAANNNNTTC 1 cut(s) 21
Zsp2I ATGCAT 1 cut(s) 516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.