Rorug07G0309600

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
31030213 .. 31039005
8793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0309600.1

Sequence Viewer

Length: 1917 bp
ATGAGATGGCTTTCTTCTTTGGCCTCTAGGGTCTCACCTGCACTCAGAACCCTCGCCTTCACCAAAAATCAGACCCAGCAAGCCTCTGCCTTGTGCTCCTCACAAAGAATCTCATTTCAGCTAAGAATACCAATTTTCGAGTTGCTAATAAACCAATCGACCACCTCTACATTGCTCGAATTCTTTCTCGCAAGACTCGACCACGAGTTGAATGCCAGGAGGATCGTTTTGAATCCTCAGCCAACACCCTTTTCAGAAAATGCCCAGTTTGAATTGCTTAAAGATATTAACAACTCAGGTTTGAAGGTCACTGAAGATTTGCTTTGCATATTAATTGGTAGTTGGGGGAGGTTGGGTTTGGCAAAGTATTGTGCTGAGGTTTTTGGGCAAATTTCGCTTTTGGGTCTTGGTCTTAGCACTAGGTTGTACAATGCTGTGATCCATGCGTTAGTCAAGTCCAATTCACTTGACTTGGCTTATTTGAAATTCCAACAGATGCCTGCAGATAATTGCTATCCTGATAGGTTCACTTACAATATCCTTATTCATGGAGTTTGCAAGATTGGTATTGTGGATGAAGCTCTCCGCTTAGTCAAGCAAATGGACGGCTTGGGATACTTGCCTAATGTTCGTACTCTGGTTGATGGTTTTTGTAATTCAAGGAGGGTTGACGAGGCCTTTGGGGTTATGAAGATAATGAGGGATAAGAATGTGACTCCTAATGAAGCTACTGTCAGATCATTGGTTCATGGGGTGTTTCGTTGCATGGACCCCAGTAAGGCTTTTGAGTTGTTATTAAGTTTTGTTGAAAGGGAGTCTCTCTTGTTTAAGGTAGCTTGTGATACCATACTGTATTGCCTTTCAATTAATCACATGGCAAGGGAGATTGCTGTGTTTTTAAAGAAATCCGGAGTGAAAGGTTATTTGCCTTTCAAGGCATTGTGTGACTTGGGAAAAGTTGACGTAGCTAAGGAGATATTCCTCTCTATGGAAGCATATGATTGTTTACCCGATTCTTCTATTTGCAATATAATGTTGGATTCTCTGGTTCAGCATAACCGTTTTGAAGAGGCCTGTAGAATGAAACGAAAAGCAAAACACACAAGGCTGATTGATAGTTCTGTAGTGCATTTTCGGAACGAACTACATCCTGAGTATGTTGCAAGAGACTTCGATTTATCTCCTGGTGAAAATGCCAACTTACTGGACAATTACAATTCAAGACCGATGCAGTGTGAGGCTGGTTCTTGGCCATCAAAGTACTTGGGCCTCTGGGGAGACTTTGTGGCACTAGCTGATCAGAAGGGGCTCAAGATAATATGTCCACGAAAGGATATTAGTATCGCAATGAGGACTTCATTAACCACTGCAGCATATTCGTGGTGTGAATTTCCGGAAAGGGAAGATGTGCAGTGCCGGCGCGAGCCGAGCTGGTCGTGGCTGAAAAGACTATTTTGTCCCTGCGTCAGCTCTCTCTTGCCCGACACCTGTCTGCCTGCCTGCTTTGATCTCCCGTGTCTTCCTTCTTCGCTTCACAGAGAGTGTGTGTTTTTGTTGCTTCGACACCTGGGTGGTTCTCAGTGCTATCGTGTCTATGATACCTCGCTCCACCGAGAGGGGTTTCTGGGTTATTGGCTTAACCTTGAGGTGGAGGTTTCATATGCTACTGTTGTAAGAAATTGGTCTGCAAGGTCTGAGGAGAAGGAGAAGGTTGAATATGTAAATCAAGATTTTATGCAAAACATTTTAGGGGTTGTTTTTGCGCCACTGTTCTGTTGTCTGTTGTTTAGTGCTATATTCAGATTCTCGGAACAGTGTGCTGTCGAATTTGTCAAGTGTTTTGGATTCAGAACTGATGCAAAAAAGTTGGAGTGGGTTCGAGCTCAGACTTCCACTTCGTTGAATGAAATAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

638

Amino Acids

72.59

Weight (kDa)

8.03

Isoelectric Point (pI)

39.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 131 - 268 4.1e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 142 - 187 1.3e-11 PPR repeat family
PPR_1 PF12854 170 - 201 2.2e-11 PPR repeat
PPR_2 PF13041 177 - 212 1.2e-06 PPR repeat family
TPR_24 PF23276 194 - 256 3.5e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 212 - 252 6.8e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 46
AasI GACNNNNNNGTC 1 cut(s) 1455
Acc36I ACCTGC 1 cut(s) 46
AccII CGCG 1 cut(s) 1422
AccIII TCCGGA 2 cut(s) 908, 1393
AciI CCGC 1 cut(s) 586
AclWI GGATC 2 cut(s) 230, 433
AcoI YGGCCR 1 cut(s) 1250
AcsI RAATTY 5 cut(s) 179, 390, 485, 1388, 1826
AcuI CTGAAG 1 cut(s) 333
AfaI GTAC 3 cut(s) 428, 634, 1262
AfiI CCNNNNNNNGG 4 cut(s) 778, 988, 1615, 1648
AjnI CCWGG 3 cut(s) 215, 1183, 1566
AjuI GAANNNNNNNTTGG 2 cut(s) 235, 267
AleI CACNNNNGTG 1 cut(s) 1569
Alw21I GWGCWC 2 cut(s) 98, 1885
Alw26I GTCTC 4 cut(s) 37, 822, 1161, 1272
AlwI GGATC 2 cut(s) 230, 433
Aor13HI TCCGGA 2 cut(s) 908, 1393
AoxI GGCC 5 cut(s) 21, 675, 1071, 1250, 1267
ApeKI GCWGC 1 cut(s) 1370
ApoI RAATTY 5 cut(s) 179, 390, 485, 1388, 1826
ArsI GACNNNNNNTTYG 4 cut(s) 662, 694, 1879, 1911
AseI ATTAAT 2 cut(s) 332, 867
Asp700I GAANNNNTTC 1 cut(s) 183
AspLEI GCGC 2 cut(s) 1422, 1765
AspS9I GGNCC 2 cut(s) 769, 1267
AsuHPI GGTGA 3 cut(s) 27, 52, 1199
AvaII GGWCC 1 cut(s) 769
BalI TGGCCA 1 cut(s) 1252
BanII GRGCYC 2 cut(s) 1311, 1885
BauI CACGAG 1 cut(s) 203
BbsI GAAGAC 1 cut(s) 1511
Bbv12I GWGCWC 2 cut(s) 98, 1885
BbvCI CCTCAGC 2 cut(s) 237, 375
BbvI GCAGC 1 cut(s) 1382
BccI CCATC 2 cut(s) 638, 1261
BceAI ACGGC 1 cut(s) 622
BcgI CGANNNNNNTGC 4 cut(s) 194, 228, 1359, 1393
BciT130I CCWGG 3 cut(s) 217, 1185, 1568
BciVI GTATCC 1 cut(s) 608
BclI TGATCA 1 cut(s) 1297
BcoDI GTCTC 4 cut(s) 37, 822, 1161, 1272
BfaI CTAG 3 cut(s) 27, 420, 1292
BfmI CTRYAG 4 cut(s) 501, 1075, 1122, 1368
BfuAI ACCTGC 1 cut(s) 46
BfuI GTATCC 1 cut(s) 608
BisI GCNGC 1 cut(s) 1371
BlsI GCNGC 1 cut(s) 1372
BmcAI AGTACT 1 cut(s) 1262
Bme1390I CCNGG 3 cut(s) 217, 1185, 1568
Bme18I GGWCC 1 cut(s) 769
BmgT120I GGNCC 2 cut(s) 769, 1267
BmiI GGNNCC 1 cut(s) 771
BmrFI CCNGG 3 cut(s) 217, 1185, 1568
BmrI ACTGGG 2 cut(s) 259, 768
BmsI GCATC 3 cut(s) 486, 1218, 1846
BmuI ACTGGG 2 cut(s) 259, 768
BoxI GACNNNNGTC 1 cut(s) 1488
BpiI GAAGAC 1 cut(s) 1511
Bpu10I CCTNAGC 3 cut(s) 237, 375, 969
BpuEI CTTGAG 2 cut(s) 1295, 1664
BsaI GGTCTC 1 cut(s) 37
BsaJI CCNNGG 1 cut(s) 1567
BsaWI WCCGGW 2 cut(s) 908, 1393
BsaXI ACNNNNNCTCC 4 cut(s) 340, 370, 1269, 1299
Bsc4I CCNNNNNNNGG 4 cut(s) 778, 988, 1615, 1648
Bse118I RCCGGY 1 cut(s) 1416
Bse1I ACTGG 3 cut(s) 265, 774, 1209
Bse3DI GCAATG 2 cut(s) 170, 1353
BseAI TCCGGA 2 cut(s) 908, 1393
BseBI CCWGG 3 cut(s) 217, 1185, 1568
BseDI CCNNGG 1 cut(s) 1567
BseGI GGATG 2 cut(s) 580, 1147
BseLI CCNNNNNNNGG 4 cut(s) 778, 988, 1615, 1648
BseMI GCAATG 2 cut(s) 170, 1353
BseMII CTCAG 8 cut(s) 58, 251, 309, 366, 1143, 1592, 1686, 1898
BseNI ACTGG 3 cut(s) 265, 774, 1209
BseRI GAGGAG 2 cut(s) 88, 1712
BseXI GCAGC 1 cut(s) 1382
BseYI CCCAGC 1 cut(s) 75
BsgI GTGCAG 2 cut(s) 24, 1430
Bsh1236I CGCG 1 cut(s) 1422
BshFI GGCC 5 cut(s) 23, 677, 1073, 1252, 1269
BsiHKAI GWGCWC 2 cut(s) 98, 1885
BsiSI CCGG 3 cut(s) 909, 1394, 1417
BslFI GGGAC 1 cut(s) 1443
BslI CCNNNNNNNGG 4 cut(s) 778, 988, 1615, 1648
BsmAI GTCTC 4 cut(s) 37, 822, 1161, 1272
BsmFI GGGAC 1 cut(s) 1443
BsmI GAATGC 1 cut(s) 217
BsnI GGCC 5 cut(s) 23, 677, 1073, 1252, 1269
Bso31I GGTCTC 1 cut(s) 37
Bsp1286I GDGCHC 3 cut(s) 98, 1311, 1885
Bsp13I TCCGGA 2 cut(s) 908, 1393
Bsp1407I TGTACA 1 cut(s) 426
Bsp143I GATC 5 cut(s) 222, 438, 737, 1297, 1507
BspACI CCGC 1 cut(s) 586
BspANI GGCC 5 cut(s) 23, 677, 1073, 1252, 1269
BspCNI CTCAG 8 cut(s) 57, 250, 308, 367, 1144, 1591, 1687, 1897
BspEI TCCGGA 2 cut(s) 908, 1393
BspFNI CGCG 1 cut(s) 1422
BspLI GGNNCC 1 cut(s) 771
BspMAI CTGCAG 2 cut(s) 505, 1372
BspMI ACCTGC 1 cut(s) 46
BspPI GGATC 2 cut(s) 230, 433
BspTNI GGTCTC 1 cut(s) 37
BsrDI GCAATG 2 cut(s) 170, 1353
BsrFI RCCGGY 1 cut(s) 1416
BsrGI TGTACA 1 cut(s) 426
BsrI ACTGG 3 cut(s) 265, 774, 1209
BssAI RCCGGY 1 cut(s) 1416
BssECI CCNNGG 1 cut(s) 1567
BssMI GATC 5 cut(s) 222, 438, 737, 1297, 1507
BssSI CACGAG 1 cut(s) 203
Bst2BI CACGAG 1 cut(s) 203
Bst2UI CCWGG 3 cut(s) 217, 1185, 1568
Bst4CI ACNGT 6 cut(s) 733, 852, 1061, 1669, 1770, 1815
Bst6I CTCTTC 1 cut(s) 1062
BstAUI TGTACA 1 cut(s) 426
BstC8I GCNNGC 6 cut(s) 81, 501, 1418, 1424, 1497, 1501
BstF5I GGATG 2 cut(s) 580, 1147
BstFNI CGCG 1 cut(s) 1422
BstHHI GCGC 2 cut(s) 1422, 1765
BstKTI GATC 5 cut(s) 225, 441, 740, 1300, 1510
BstMAI GTCTC 4 cut(s) 37, 822, 1161, 1272
BstMBI GATC 5 cut(s) 222, 438, 737, 1297, 1507
BstMWI GCNNNNNNNGC 3 cut(s) 394, 1417, 1428
BstNI CCWGG 3 cut(s) 217, 1185, 1568
BstPAI GACNNNNGTC 1 cut(s) 1488
BstSCI CCNGG 3 cut(s) 215, 1183, 1566
BstSFI CTRYAG 4 cut(s) 501, 1075, 1122, 1368
BstUI CGCG 1 cut(s) 1422
BstV1I GCAGC 1 cut(s) 1382
BstV2I GAAGAC 1 cut(s) 1511
BstXI CCANNNNNNTGG 1 cut(s) 1204
BsuI GTATCC 1 cut(s) 608
BsuRI GGCC 5 cut(s) 23, 677, 1073, 1252, 1269
BtsCI GGATG 2 cut(s) 580, 1147
BtsI GCAGTG 3 cut(s) 1238, 1365, 1418
BtsIMutI CAGTG 7 cut(s) 309, 1238, 1365, 1418, 1586, 1766, 1820
BveI ACCTGC 1 cut(s) 46
Cac8I GCNNGC 6 cut(s) 81, 501, 1418, 1424, 1497, 1501
CfoI GCGC 2 cut(s) 1422, 1765
Cfr10I RCCGGY 1 cut(s) 1416
Cfr13I GGNCC 2 cut(s) 769, 1267
CseI GACGC 1 cut(s) 1453
Csp6I GTAC 3 cut(s) 427, 633, 1261
CviAII CATG 5 cut(s) 443, 548, 749, 766, 874
CviQI GTAC 3 cut(s) 427, 633, 1261
DpnI GATC 5 cut(s) 224, 440, 739, 1299, 1509
DpnII GATC 5 cut(s) 222, 438, 737, 1297, 1507
DraI TTTAAA 1 cut(s) 900
DrdI GACNNNNNNGTC 1 cut(s) 1455
DseDI GACNNNNNNGTC 1 cut(s) 1455
EaeI YGGCCR 1 cut(s) 1250
Eam1104I CTCTTC 1 cut(s) 1062
EarI CTCTTC 1 cut(s) 1062
Ecl136II GAGCTC 1 cut(s) 1883
Eco147I AGGCCT 2 cut(s) 677, 1073
Eco24I GRGCYC 2 cut(s) 1311, 1885
Eco31I GGTCTC 1 cut(s) 37
Eco47I GGWCC 1 cut(s) 769
Eco53kI GAGCTC 1 cut(s) 1883
Eco57I CTGAAG 1 cut(s) 333
EcoICRI GAGCTC 1 cut(s) 1883
EcoRI GAATTC 1 cut(s) 179
EcoRII CCWGG 3 cut(s) 215, 1183, 1566
EcoT38I GRGCYC 2 cut(s) 1311, 1885
FaeI CATG 5 cut(s) 446, 551, 752, 769, 877
FalI AAGNNNNNCTT 2 cut(s) 306, 338
FaqI GGGAC 1 cut(s) 1443
FatI CATG 5 cut(s) 442, 547, 748, 765, 873
FauNDI CATATG 2 cut(s) 997, 1660
FbaI TGATCA 1 cut(s) 1297
Fnu4HI GCNGC 1 cut(s) 1371
FokI GGATG 2 cut(s) 587, 1134
FriOI GRGCYC 2 cut(s) 1311, 1885
Fsp4HI GCNGC 1 cut(s) 1371
FspBI CTAG 3 cut(s) 27, 420, 1292
GlaI GCGC 2 cut(s) 1421, 1764
GluI GCNGC 1 cut(s) 1371
GsaI CCCAGC 1 cut(s) 79
HaeIII GGCC 5 cut(s) 23, 677, 1073, 1252, 1269
HapII CCGG 3 cut(s) 909, 1394, 1417
HgaI GACGC 1 cut(s) 1453
HhaI GCGC 2 cut(s) 1422, 1765
Hin1II CATG 5 cut(s) 446, 551, 752, 769, 877
Hin6I GCGC 2 cut(s) 1420, 1763
HinP1I GCGC 2 cut(s) 1420, 1763
HincII GTYRAC 2 cut(s) 670, 961
HindII GTYRAC 2 cut(s) 670, 961
HinfI GANTC 9 cut(s) 108, 195, 232, 715, 815, 1013, 1040, 1803, 1845
HpaII CCGG 3 cut(s) 909, 1394, 1417
HphI GGTGA 3 cut(s) 27, 52, 1199
Hpy166II GTNNAC 5 cut(s) 528, 670, 961, 1007, 1325
Hpy188III TCNNGA 7 cut(s) 518, 909, 1151, 1221, 1312, 1394, 1727
Hpy8I GTNNAC 5 cut(s) 528, 670, 961, 1007, 1325
HpyAV CCTTC 6 cut(s) 67, 298, 1297, 1533, 1696, 1702
HpyCH4III ACNGT 6 cut(s) 733, 852, 1061, 1669, 1770, 1815
HpyCH4IV ACGT 1 cut(s) 963
HpyF10VI GCNNNNNNNGC 3 cut(s) 394, 1417, 1428
HpySE526I ACGT 1 cut(s) 963
Hsp92II CATG 5 cut(s) 446, 551, 752, 769, 877
HspAI GCGC 2 cut(s) 1420, 1763
Kpn2I TCCGGA 2 cut(s) 908, 1393
KroI GCCGGC 1 cut(s) 1416
KroNI GCCGGC 1 cut(s) 1418
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 5 cut(s) 222, 438, 737, 1297, 1507
LmnI GCTCC 2 cut(s) 101, 1611
Lsp1109I GCAGC 1 cut(s) 1382
LweI GCATC 3 cut(s) 486, 1218, 1846
MaeI CTAG 3 cut(s) 27, 420, 1292
MaeII ACGT 1 cut(s) 963
MaeIII GTNAC 3 cut(s) 307, 712, 944
MalI GATC 5 cut(s) 224, 440, 739, 1299, 1509
MboI GATC 5 cut(s) 222, 438, 737, 1297, 1507
MboII GAAGA 8 cut(s) 6, 326, 703, 1008, 1079, 1415, 1511, 1518
MhlI GDGCHC 3 cut(s) 98, 1311, 1885
MlsI TGGCCA 1 cut(s) 1252
MluNI TGGCCA 1 cut(s) 1252
MlyI GAGTC 3 cut(s) 189, 709, 824
MmeI TCCRAC 3 cut(s) 514, 1017, 1848
Mox20I TGGCCA 1 cut(s) 1252
MroI TCCGGA 2 cut(s) 908, 1393
MroNI GCCGGC 1 cut(s) 1416
MroXI GAANNNNTTC 1 cut(s) 183
MscI TGGCCA 1 cut(s) 1252
MslI CAYNNNNRTG 2 cut(s) 1378, 1569
Msp20I TGGCCA 1 cut(s) 1252
MspI CCGG 3 cut(s) 909, 1394, 1417
MspR9I CCNGG 3 cut(s) 217, 1185, 1568
Mva1269I GAATGC 1 cut(s) 217
MvaI CCWGG 3 cut(s) 217, 1185, 1568
MvnI CGCG 1 cut(s) 1422
MwoI GCNNNNNNNGC 3 cut(s) 394, 1417, 1428
NaeI GCCGGC 1 cut(s) 1418
NdeI CATATG 2 cut(s) 997, 1660
NdeII GATC 5 cut(s) 222, 438, 737, 1297, 1507
NgoMIV GCCGGC 1 cut(s) 1416
NlaIII CATG 5 cut(s) 446, 551, 752, 769, 877
NlaIV GGNNCC 1 cut(s) 771
NmeAIII GCCGAG 1 cut(s) 1452
NmuCI GTSAC 3 cut(s) 307, 712, 944
OliI CACNNNNGTG 1 cut(s) 1569
PaqCI CACCTGC 1 cut(s) 46
PceI AGGCCT 2 cut(s) 677, 1073
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PctI GAATGC 1 cut(s) 217
PdiI GCCGGC 1 cut(s) 1418
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 6 cut(s) 108, 232, 1013, 1040, 1803, 1845
PkrI GCNGC 1 cut(s) 1372
PleI GAGTC 3 cut(s) 189, 709, 823
PpsI GAGTC 3 cut(s) 189, 709, 823
PshAI GACNNNNGTC 1 cut(s) 1488
PshBI ATTAAT 2 cut(s) 332, 867
Psp124BI GAGCTC 1 cut(s) 1885
Psp6I CCWGG 3 cut(s) 215, 1183, 1566
PspFI CCCAGC 1 cut(s) 75
PspGI CCWGG 3 cut(s) 215, 1183, 1566
PspN4I GGNNCC 1 cut(s) 771
PspPI GGNCC 2 cut(s) 769, 1267
PstI CTGCAG 2 cut(s) 505, 1372
RsaI GTAC 3 cut(s) 428, 634, 1262
RsaNI GTAC 3 cut(s) 427, 633, 1261
RseI CAYNNNNRTG 2 cut(s) 1378, 1569
SacI GAGCTC 1 cut(s) 1885
SatI GCNGC 1 cut(s) 1371
Sau3AI GATC 5 cut(s) 222, 438, 737, 1297, 1507
Sau96I GGNCC 2 cut(s) 769, 1267
ScaI AGTACT 1 cut(s) 1262
SchI GAGTC 3 cut(s) 189, 709, 824
ScrFI CCNGG 3 cut(s) 217, 1185, 1568
SduI GDGCHC 3 cut(s) 98, 1311, 1885
SfaNI GCATC 3 cut(s) 486, 1218, 1846
SfcI CTRYAG 4 cut(s) 501, 1075, 1122, 1368
SinI GGWCC 1 cut(s) 769
SmiMI CAYNNNNRTG 2 cut(s) 1378, 1569
SmlI CTYRAG 2 cut(s) 1310, 1643
SmoI CTYRAG 2 cut(s) 1310, 1643
SseBI AGGCCT 2 cut(s) 677, 1073
SsiI CCGC 1 cut(s) 586
SspMI CTAG 3 cut(s) 27, 420, 1292
SstI GAGCTC 1 cut(s) 1885
StuI AGGCCT 2 cut(s) 677, 1073
StyD4I CCNGG 3 cut(s) 215, 1183, 1566
TaaI ACNGT 6 cut(s) 733, 852, 1061, 1669, 1770, 1815
TaiI ACGT 1 cut(s) 966
TaqI TCGA 8 cut(s) 138, 158, 177, 198, 1173, 1561, 1824, 1879
TaqII GACCGA 1 cut(s) 1240
TatI WGTACW 2 cut(s) 426, 1260
TfiI GAWTC 6 cut(s) 108, 232, 1013, 1040, 1803, 1845
TscAI CASTG 7 cut(s) 316, 1238, 1372, 1418, 1586, 1773, 1820
TseFI GTSAC 3 cut(s) 307, 712, 944
TseI GCWGC 1 cut(s) 1370
Tsp45I GTSAC 3 cut(s) 307, 712, 944
TspDTI ATGAA 8 cut(s) 536, 591, 704, 737, 738, 1097, 1347, 1647
TspRI CASTG 7 cut(s) 316, 1238, 1372, 1418, 1586, 1773, 1820
VpaK11BI GGWCC 1 cut(s) 769
VspI ATTAAT 2 cut(s) 332, 867
XapI RAATTY 5 cut(s) 179, 390, 485, 1388, 1826
XmnI GAANNNNTTC 1 cut(s) 183
XspI CTAG 3 cut(s) 27, 420, 1292
ZrmI AGTACT 1 cut(s) 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.