MD08G1191000.v1.1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000476
Physical Location & Seq
Reverse (-)
24185181 .. 24188550
3370 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1191000.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGAAGGGAAGTGTCGAGGAAAAAGTAATGGATCGCCAAAAATATTCCCTATTGGCGATAGAATCATCAAGTACTTCTGAGATGAAGAAAATAGCGACCGACTTTTTATCAAGAGTGTGGATAGAGTCCAAGAAACTATGGCACATTGTAGGTCCTGATATCATTAACCGCTTGGCTGGCTACTCCATGACTGTCATCACCCAAGCCTTTGCTGGCCACCTTGGCGATGTTGAACTTGCTTCCATTTCCATGGCCAACAATATCATTGTTGGCTTTGGTTATGGTCTCTTGTTGGGGATGGCAAGCGCGCTAGCCACTCTATGTGGGCAGACTTTTGGTGCCAAAAGGTACCACATGCTGGGCATATACATGCAAAGGTCTTGGATTGTGCTGTTTTCGTGCTGCATTCTTCTGTTGCCTGTGTACCTATACGCGTCTCCGATTCTGAAACTAATCGGACAGTCTGATGAGGTGGCGGAGCAGTCTGGGGCGCTGGCTTTGTGGCTCATACCCTTGCACTTCAGCTATGCATTTCAGTTCCCATTGCAGAGGTTCTTGCAGTGCCAGCTCAAAAACTTTGTGACCTTGTGGGTTTCGTTGGCAGTTTTGGTGCTTCATTCAGTGACAACTTGGATTTTGGTGAGTGTGTTGGATTTTGGGGTTGTGGGTGCTGCCATTGCTCTTGATATCTCATGCTGGGCTTGCGGTTTGGGGCTGTTTTGGTATGTTGTGTCTGGTGGTTGTCCATTGAGTTGGGTTGGTTTCTCAATACAAGCATTTTCTGGGATTTGGGAATTTGCCAAATATTCTGCTGCTTCTGGGGTCCTGCTGTGCTTGGAATTCTGGAGCTATAGAATCCTAATACTGATGACTGGGTTCTTAGAGGAAGCAACTCTTGCTGTGGATGCCTTGTCAATATGCACGACTATAAATGTATGGGACCTCATGATTCATTTGGCTTTCTTGGTTGGCACGGCGTACTTACCATATTTATCATCTCTTTCAGTCATAGTTAGGGTGGCAAATGAGCTCGGATCCGGAAATGGGAAGGCAGCTAAATTTGCACAACAGGTTTCAATGGCACAATCTGCTTCAATCGGTCTATGCTTATGTGTACTTGTTATCATGTTCCATCACAAGTTCGCCCACGTATTCACATCGAGTCCTGATGTCATCGAAGCAGTTGATCAAATGTCGTATCTCTTGGCCGTAACAGTTCTACTTAACAGTGTTCAATCCGTCTTGGCAGGAGTGGTGGTGGGGTCAGGATGGCAAGCATGGGTGGCATATATAAGTCTTTTCTCCTACTACATTTTTGGGCTCCCACTTGCATTTGTAATGGGATCGGCTCTCCACTTCGGTGTTTCGGGTATATGGGGTGGGATGATCTTTGGTGGAACTGCTGTGCAAACAGCGATTTTGGCCATCGTGACAATAAGACATGATTGGGAAATGGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

488

Amino Acids

53.16

Weight (kDa)

6.11

Isoelectric Point (pI)

33.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 54 - 212 5.3e-29 MatE
MatE PF01554 277 - 446 1.9e-18 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 2 cut(s) 338, 348
AccB7I CCANNNNNTGG 1 cut(s) 358
AccII CGCG 2 cut(s) 308, 434
AccIII TCCGGA 1 cut(s) 1037
AciI CCGC 3 cut(s) 169, 476, 705
AclWI GGATC 4 cut(s) 39, 1029, 1042, 1351
AcoI YGGCCR 4 cut(s) 214, 252, 1206, 1422
AcsI RAATTY 3 cut(s) 794, 839, 1058
AcuI CTGAAG 1 cut(s) 505
AfaI GTAC 5 cut(s) 73, 350, 425, 980, 1116
AfiI CCNNNNNNNGG 2 cut(s) 358, 1044
AflIII ACRYGT 1 cut(s) 432
AgsI TTSAA 4 cut(s) 233, 1077, 1095, 1235
AleI CACNNNNGTG 1 cut(s) 1359
AluBI AGCT 5 cut(s) 525, 568, 849, 1030, 1055
AluI AGCT 5 cut(s) 525, 568, 849, 1030, 1055
Alw21I GWGCWC 1 cut(s) 1032
Alw26I GTCTC 2 cut(s) 290, 441
AlwI GGATC 4 cut(s) 39, 1029, 1042, 1351
Aor13HI TCCGGA 1 cut(s) 1037
AoxI GGCC 4 cut(s) 214, 252, 1206, 1422
ApeKI GCWGC 4 cut(s) 402, 671, 812, 1052
ApoI RAATTY 3 cut(s) 794, 839, 1058
Asp718I GGTACC 1 cut(s) 348
AspLEI GCGC 3 cut(s) 308, 310, 493
AspS9I GGNCC 3 cut(s) 152, 823, 940
AsuHPI GGTGA 2 cut(s) 190, 652
AsuNHI GCTAGC 1 cut(s) 310
AvaII GGWCC 3 cut(s) 152, 823, 940
BalI TGGCCA 3 cut(s) 216, 254, 1424
BamHI GGATCC 1 cut(s) 1034
BanI GGYRCC 2 cut(s) 338, 348
BanII GRGCYC 2 cut(s) 1032, 1323
Bbv12I GWGCWC 1 cut(s) 1032
BbvI GCAGC 4 cut(s) 389, 658, 799, 1064
BccI CCATC 4 cut(s) 292, 1140, 1263, 1433
BceAI ACGGC 2 cut(s) 990, 1193
BclI TGATCA 1 cut(s) 1186
BcoDI GTCTC 2 cut(s) 290, 441
BfaI CTAG 1 cut(s) 311
BfmI CTRYAG 1 cut(s) 850
BfoI RGCGCY 1 cut(s) 494
BglI GCCNNNNNGGC 1 cut(s) 222
BisI GCNGC 4 cut(s) 403, 672, 813, 1053
BlsI GCNGC 4 cut(s) 404, 673, 814, 1054
BmcAI AGTACT 1 cut(s) 73
Bme18I GGWCC 3 cut(s) 152, 823, 940
BmgT120I GGNCC 3 cut(s) 152, 823, 940
BmiI GGNNCC 6 cut(s) 340, 350, 824, 941, 1036, 1322
BmrI ACTGGG 1 cut(s) 882
BmsI GCATC 1 cut(s) 895
BmtI GCTAGC 1 cut(s) 314
BmuI ACTGGG 1 cut(s) 882
BpmI CTGGAG 1 cut(s) 865
BsaAI YACGTR 1 cut(s) 1150
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 2 cut(s) 220, 249
BsaWI WCCGGW 1 cut(s) 1037
BsaXI ACNNNNNCTCC 2 cut(s) 1242, 1272
Bsc4I CCNNNNNNNGG 2 cut(s) 358, 1044
Bse1I ACTGG 1 cut(s) 877
Bse3DI GCAATG 2 cut(s) 542, 675
BseAI TCCGGA 1 cut(s) 1037
BseDI CCNNGG 2 cut(s) 220, 249
BseGI GGATG 4 cut(s) 303, 910, 1274, 1389
BseLI CCNNNNNNNGG 2 cut(s) 358, 1044
BseMI GCAATG 2 cut(s) 542, 675
BseMII CTCAG 1 cut(s) 69
BseNI ACTGG 1 cut(s) 877
BsePI GCGCGC 1 cut(s) 306
BseXI GCAGC 4 cut(s) 389, 658, 799, 1064
BseYI CCCAGC 2 cut(s) 358, 696
Bsh1236I CGCG 2 cut(s) 308, 434
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 4 cut(s) 216, 254, 1208, 1424
BshNI GGYRCC 2 cut(s) 338, 348
BsiEI CGRYCG 1 cut(s) 99
BsiHKAI GWGCWC 1 cut(s) 1032
BsiSI CCGG 1 cut(s) 1038
BslFI GGGAC 1 cut(s) 953
BslI CCNNNNNNNGG 2 cut(s) 358, 1044
BsmAI GTCTC 2 cut(s) 290, 441
BsmBI CGTCTC 1 cut(s) 441
BsmFI GGGAC 1 cut(s) 953
BsmI GAATGC 1 cut(s) 405
BsnI GGCC 4 cut(s) 216, 254, 1208, 1424
Bso31I GGTCTC 1 cut(s) 290
Bsp1286I GDGCHC 2 cut(s) 1032, 1323
Bsp13I TCCGGA 1 cut(s) 1037
Bsp143I GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
Bsp19I CCATGG 1 cut(s) 249
BspACI CCGC 3 cut(s) 169, 476, 705
BspANI GGCC 4 cut(s) 216, 254, 1208, 1424
BspCNI CTCAG 1 cut(s) 70
BspEI TCCGGA 1 cut(s) 1037
BspFNI CGCG 2 cut(s) 308, 434
BspHI TCATGA 1 cut(s) 945
BspLI GGNNCC 6 cut(s) 340, 350, 824, 941, 1036, 1322
BspOI GCTAGC 1 cut(s) 314
BspPI GGATC 4 cut(s) 39, 1029, 1042, 1351
BspT107I GGYRCC 2 cut(s) 338, 348
BspTNI GGTCTC 1 cut(s) 290
BsrDI GCAATG 2 cut(s) 542, 675
BsrI ACTGG 1 cut(s) 877
BssECI CCNNGG 2 cut(s) 220, 249
BssHII GCGCGC 1 cut(s) 306
BssMI GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
BssT1I CCWWGG 2 cut(s) 220, 249
Bst4CI ACNGT 4 cut(s) 193, 462, 1216, 1229
BstAPI GCANNNNNTGC 2 cut(s) 896, 1088
BstBAI YACGTR 1 cut(s) 1150
BstC8I GCNNGC 9 cut(s) 178, 214, 304, 308, 312, 495, 566, 703, 1275
BstDEI CTNAG 2 cut(s) 78, 880
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 4 cut(s) 303, 910, 1274, 1389
BstFNI CGCG 2 cut(s) 308, 434
BstH2I RGCGCY 1 cut(s) 494
BstHHI GCGC 3 cut(s) 308, 310, 493
BstKTI GATC 5 cut(s) 34, 1037, 1189, 1346, 1389
BstMAI GTCTC 2 cut(s) 290, 441
BstMBI GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
BstMCI CGRYCG 1 cut(s) 99
BstNSI RCATGY 2 cut(s) 358, 373
BstSFI CTRYAG 1 cut(s) 850
BstUI CGCG 2 cut(s) 308, 434
BstV1I GCAGC 4 cut(s) 389, 658, 799, 1064
BstX2I RGATCY 1 cut(s) 1034
BstXI CCANNNNNNTGG 2 cut(s) 250, 753
BstYI RGATCY 1 cut(s) 1034
BsuRI GGCC 4 cut(s) 216, 254, 1208, 1424
BtgI CCRYGG 1 cut(s) 249
BtgZI GCGATG 1 cut(s) 240
BtsCI GGATG 4 cut(s) 303, 910, 1274, 1389
BtsI GCAGTG 1 cut(s) 566
BtsIMutI CAGTG 3 cut(s) 566, 627, 1234
Cac8I GCNNGC 9 cut(s) 178, 214, 304, 308, 312, 495, 566, 703, 1275
CciI TCATGA 1 cut(s) 945
CfoI GCGC 3 cut(s) 308, 310, 493
Cfr13I GGNCC 3 cut(s) 152, 823, 940
CseI GACGC 1 cut(s) 423
Csp6I GTAC 5 cut(s) 72, 349, 424, 979, 1115
CviAII CATG 9 cut(s) 187, 250, 355, 370, 693, 946, 1126, 1278, 1442
CviQI GTAC 5 cut(s) 72, 349, 424, 979, 1115
DdeI CTNAG 2 cut(s) 78, 880
DpnI GATC 5 cut(s) 33, 1036, 1188, 1345, 1388
DpnII GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
EaeI YGGCCR 4 cut(s) 214, 252, 1206, 1422
EciI GGCGGA 1 cut(s) 491
Ecl136II GAGCTC 1 cut(s) 1030
Eco130I CCWWGG 2 cut(s) 220, 249
Eco24I GRGCYC 2 cut(s) 1032, 1323
Eco31I GGTCTC 1 cut(s) 290
Eco32I GATATC 2 cut(s) 160, 688
Eco47I GGWCC 3 cut(s) 152, 823, 940
Eco53kI GAGCTC 1 cut(s) 1030
Eco57I CTGAAG 1 cut(s) 505
EcoICRI GAGCTC 1 cut(s) 1030
EcoO109I RGGNCCY 3 cut(s) 152, 823, 940
EcoRI GAATTC 1 cut(s) 839
EcoRV GATATC 2 cut(s) 160, 688
EcoT14I CCWWGG 2 cut(s) 220, 249
EcoT22I ATGCAT 1 cut(s) 532
EcoT38I GRGCYC 2 cut(s) 1032, 1323
ErhI CCWWGG 2 cut(s) 220, 249
Esp3I CGTCTC 1 cut(s) 441
FaeI CATG 9 cut(s) 190, 253, 358, 373, 696, 949, 1129, 1281, 1445
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 1 cut(s) 953
FatI CATG 9 cut(s) 186, 249, 354, 369, 692, 945, 1125, 1277, 1441
FbaI TGATCA 1 cut(s) 1186
Fnu4HI GCNGC 4 cut(s) 403, 672, 813, 1053
FokI GGATG 4 cut(s) 310, 917, 1281, 1396
FriOI GRGCYC 2 cut(s) 1032, 1323
Fsp4HI GCNGC 4 cut(s) 403, 672, 813, 1053
FspBI CTAG 1 cut(s) 311
GlaI GCGC 3 cut(s) 307, 309, 492
GluI GCNGC 4 cut(s) 403, 672, 813, 1053
GsaI CCCAGC 2 cut(s) 362, 700
GsuI CTGGAG 1 cut(s) 865
HaeII RGCGCY 1 cut(s) 494
HaeIII GGCC 4 cut(s) 216, 254, 1208, 1424
HapII CCGG 1 cut(s) 1038
HgaI GACGC 1 cut(s) 423
HhaI GCGC 3 cut(s) 308, 310, 493
Hin1II CATG 9 cut(s) 190, 253, 358, 373, 696, 949, 1129, 1281, 1445
Hin6I GCGC 3 cut(s) 306, 308, 491
HinP1I GCGC 3 cut(s) 306, 308, 491
HinfI GANTC 6 cut(s) 62, 125, 442, 855, 949, 1162
HpaII CCGG 1 cut(s) 1038
HphI GGTGA 2 cut(s) 190, 652
Hpy166II GTNNAC 2 cut(s) 424, 1115
Hpy188I TCNGA 6 cut(s) 79, 441, 447, 458, 466, 1034
Hpy188III TCNNGA 9 cut(s) 111, 155, 683, 844, 946, 1038, 1166, 1266, 1429
Hpy8I GTNNAC 2 cut(s) 424, 1115
HpyAV CCTTC 1 cut(s) 1042
HpyCH4III ACNGT 4 cut(s) 193, 462, 1216, 1229
HpyCH4IV ACGT 1 cut(s) 1149
HpyF3I CTNAG 2 cut(s) 78, 880
HpySE526I ACGT 1 cut(s) 1149
Hsp92II CATG 9 cut(s) 190, 253, 358, 373, 696, 949, 1129, 1281, 1445
HspAI GCGC 3 cut(s) 306, 308, 491
Kpn2I TCCGGA 1 cut(s) 1037
KpnI GGTACC 1 cut(s) 352
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
LmnI GCTCC 3 cut(s) 478, 846, 1326
Lsp1109I GCAGC 4 cut(s) 389, 658, 799, 1064
LweI GCATC 1 cut(s) 895
MaeI CTAG 1 cut(s) 311
MaeII ACGT 1 cut(s) 1149
MaeIII GTNAC 4 cut(s) 580, 622, 1210, 1429
MalI GATC 5 cut(s) 33, 1036, 1188, 1345, 1388
MboI GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
MboII GAAGA 2 cut(s) 97, 401
MflI RGATCY 1 cut(s) 1034
MhlI GDGCHC 2 cut(s) 1032, 1323
MlsI TGGCCA 3 cut(s) 216, 254, 1424
MluCI AATT 3 cut(s) 794, 839, 1058
MluI ACGCGT 1 cut(s) 432
MluNI TGGCCA 3 cut(s) 216, 254, 1424
MlyI GAGTC 2 cut(s) 134, 1171
MmeI TCCRAC 1 cut(s) 630
MnlI CCTC 6 cut(s) 10, 463, 543, 877, 953, 1450
Mox20I TGGCCA 3 cut(s) 216, 254, 1424
Mph1103I ATGCAT 1 cut(s) 532
MroI TCCGGA 1 cut(s) 1037
MscI TGGCCA 3 cut(s) 216, 254, 1424
MseI TTAA 2 cut(s) 165, 1224
MslI CAYNNNNRTG 3 cut(s) 248, 368, 1359
Msp20I TGGCCA 3 cut(s) 216, 254, 1424
MspI CCGG 1 cut(s) 1038
Mva1269I GAATGC 1 cut(s) 405
MvnI CGCG 2 cut(s) 308, 434
NcoI CCATGG 1 cut(s) 249
NdeII GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
NheI GCTAGC 1 cut(s) 310
NlaIII CATG 9 cut(s) 190, 253, 358, 373, 696, 949, 1129, 1281, 1445
NlaIV GGNNCC 6 cut(s) 340, 350, 824, 941, 1036, 1322
NmuCI GTSAC 3 cut(s) 580, 622, 1429
NsiI ATGCAT 1 cut(s) 532
NspI RCATGY 2 cut(s) 358, 373
OliI CACNNNNGTG 1 cut(s) 1359
PagI TCATGA 1 cut(s) 945
PauI GCGCGC 1 cut(s) 306
PctI GAATGC 1 cut(s) 405
PfeI GAWTC 4 cut(s) 62, 442, 855, 949
PflMI CCANNNNNTGG 1 cut(s) 358
PkrI GCNGC 4 cut(s) 404, 673, 814, 1054
PleI GAGTC 2 cut(s) 133, 1170
PpsI GAGTC 2 cut(s) 133, 1170
Ppu21I YACGTR 1 cut(s) 1150
PpuMI RGGWCCY 3 cut(s) 152, 823, 940
Psp124BI GAGCTC 1 cut(s) 1032
Psp5II RGGWCCY 3 cut(s) 152, 823, 940
PspFI CCCAGC 2 cut(s) 358, 696
PspN4I GGNNCC 6 cut(s) 340, 350, 824, 941, 1036, 1322
PspPI GGNCC 3 cut(s) 152, 823, 940
PspPPI RGGWCCY 3 cut(s) 152, 823, 940
PsuI RGATCY 1 cut(s) 1034
PteI GCGCGC 1 cut(s) 306
RsaI GTAC 5 cut(s) 73, 350, 425, 980, 1116
RsaNI GTAC 5 cut(s) 72, 349, 424, 979, 1115
RseI CAYNNNNRTG 3 cut(s) 248, 368, 1359
SacI GAGCTC 1 cut(s) 1032
SaqAI TTAA 2 cut(s) 165, 1224
SatI GCNGC 4 cut(s) 403, 672, 813, 1053
Sau3AI GATC 5 cut(s) 31, 1034, 1186, 1343, 1386
Sau96I GGNCC 3 cut(s) 152, 823, 940
ScaI AGTACT 1 cut(s) 73
SchI GAGTC 2 cut(s) 134, 1171
SduI GDGCHC 2 cut(s) 1032, 1323
SfaNI GCATC 1 cut(s) 895
SfcI CTRYAG 1 cut(s) 850
SinI GGWCC 3 cut(s) 152, 823, 940
SmiMI CAYNNNNRTG 3 cut(s) 248, 368, 1359
Sse9I AATT 3 cut(s) 794, 839, 1058
SsiI CCGC 3 cut(s) 169, 476, 705
SspI AATATT 2 cut(s) 44, 806
SspMI CTAG 1 cut(s) 311
SstI GAGCTC 1 cut(s) 1032
StyI CCWWGG 2 cut(s) 220, 249
TaaI ACNGT 4 cut(s) 193, 462, 1216, 1229
TaiI ACGT 1 cut(s) 1152
TaqI TCGA 3 cut(s) 15, 1160, 1176
TaqII GACCGA 2 cut(s) 113, 1088
TasI AATT 3 cut(s) 794, 839, 1058
TatI WGTACW 2 cut(s) 71, 1114
TfiI GAWTC 4 cut(s) 62, 442, 855, 949
Tru1I TTAA 2 cut(s) 165, 1224
Tru9I TTAA 2 cut(s) 165, 1224
TscAI CASTG 3 cut(s) 566, 627, 1234
TseFI GTSAC 3 cut(s) 580, 622, 1429
TseI GCWGC 4 cut(s) 402, 671, 812, 1052
Tsp45I GTSAC 3 cut(s) 580, 622, 1429
TspDTI ATGAA 4 cut(s) 17, 98, 605, 941
TspGWI ACGGA 1 cut(s) 1228
TspRI CASTG 3 cut(s) 566, 627, 1234
Van91I CCANNNNNTGG 1 cut(s) 358
VpaK11BI GGWCC 3 cut(s) 152, 823, 940
XapI RAATTY 3 cut(s) 794, 839, 1058
XceI RCATGY 2 cut(s) 358, 373
XcmI CCANNNNNNNNNTGG 1 cut(s) 209
XspI CTAG 1 cut(s) 311
ZrmI AGTACT 1 cut(s) 73
Zsp2I ATGCAT 1 cut(s) 532
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.