Rroxscaffold_3G00223470

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000476
Physical Location & Seq
Reverse (-)
6556903 .. 6560516
3614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00223470.1

Sequence Viewer

Length: 1545 bp
ATGGAACACAGAAGGGATGAAAATGGTGCAGGTTCTGATCTTACACTGTCCCTGATACCGGAATCTTCGCCACCCGAAAACGGCAGTTTTGGTTATGACGACAAAGAGGAAGGCAAGCTTTCCGTGAGGGTCTGGGTAGAGTCCAAGAAGCTATGGCAGATAGTGGGCCCCGCCATCTTCAGCCGTGTCGCCTCCTACACCATGAATGTCGTTACTCAGGCCTTCGCTGGCCACCTCGGTGAAGTCGAACTTGCTGCCATCTCCATTGCCAACACTGTCATCGTCGGCTTCAATTTCGGTCTCTTGCTAGGAATGGCAAGCGCCTTAGAAACGCTATGTGGGCAAGCCTTTGGAGCCAGAAGATACCAGATGCTTGGGATATACCTCCAGAGGTCATGGATTGTGTTGTTCCTCTGTTGCTTTGCTCTGTTGCCATTTTATATTTTCGCTTCACCGATTCTTAAACTCATGGGACAAACGGATGAGGTGGCGGAGCAGTCGGGGCTGGTGGCTGTGTGGCTCATACCCTTGCACTTTAGCTTTGCTTTCCAGTTTCCCATGCAGAGATTCTTGCAATGCCAGCTGAAGAACTCTATCATCGCTTGGGTATCGTTAGTGGGGTTGTTGGTTAATGTGTTCACAAGTTGGCTTCTAGTCTATGTGTTGGATTGTGGGGTTGTGGGTGCTGCTATTGCTTTGGATATCTCTTGGTGGTTTTTGGTCTTTGGGATGTACATATATATTGCTTGTGGTTGGTGCCCTCTCACTTGGACTGGTTTTTCTGTGGAAGCCTTCTCTGGGCTTTGGCAATTCATCAAACTCTCTGCAGCTGCTGGTGTTATGCTCTGCTTGGAGAACTGGTATTACAGAATACTGATATTGATGACTGGCTACTTGAGTGATGCAACTATTGCTGTGGATGCCTTGTCAGTTTGCATGACTATTAATGGTTGGGAGCTCATGATTCCTTTAGCCTTCTTTGCTGGGACAGGAGTAAGGGTGGCAAATGAGTTGGGAGCTGGAAACTGGAAGGGGGCAAAATTTGCAACAAAGGTTGCTGTGACAGAGTCCACAGTGATCGGTGTCTTTTTCTGTGTACTTGTGATGATACTCAAAGACAAGATCGCATACATATTCACAACCAGCAGTGATGTCCTCGCAGCAGTCGATGATCTGTCTTACCTCTTGGCCATCACAATTTTACTTAACAGCGTTCAACCAGTTTTATCAGATGGTCTTATTTATGTTATAGGAGTAGCTGTGGGATCAGGATGGCAAGCATGGGTGGCATATATAAATCTCTTCTGCTACTACATTGTTGGGCTCCCACTTGGGTTTGTAATGGGATGGGTCTTAAACTTAAGCACTGCGGGTATTTGGGGTGGAATGATCTTTGGTGGAACTGCTATACAGACACTGATATTGTCCATCATAACTGTAAGACGAGATTGGAAAAAGGAGGCTGAGGATGCCAGCAAACGTGTGTCAAAGTGGTCGACGCCTAATCCAGAAGACAAGCCATCAGAACAGCTACTAGTAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

514

Amino Acids

56.54

Weight (kDa)

5.09

Isoelectric Point (pI)

24.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 57 - 217 3.4e-30 MatE
MatE PF01554 279 - 447 8.4e-25 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 20
AccB1I GGYRCC 1 cut(s) 756
AccI GTMKAC 1 cut(s) 1496
AciI CCGC 3 cut(s) 171, 491, 1370
AclWI GGATC 1 cut(s) 1273
AcoI YGGCCR 2 cut(s) 229, 1188
AcsI RAATTY 1 cut(s) 1040
AcuI CTGAAG 2 cut(s) 163, 605
AcyI GRCGYC 1 cut(s) 1499
AfaI GTAC 2 cut(s) 734, 1098
AfiI CCNNNNNNNGG 3 cut(s) 58, 80, 798
AflII CTTAAG 1 cut(s) 1360
AflIII ACRYGT 1 cut(s) 1480
AgsI TTSAA 2 cut(s) 292, 1217
AhlI ACTAGT 1 cut(s) 1534
AleI CACNNNNGTG 1 cut(s) 237
AluBI AGCT 9 cut(s) 118, 151, 540, 583, 830, 958, 1019, 1259, 1531
AluI AGCT 9 cut(s) 118, 151, 540, 583, 830, 958, 1019, 1259, 1531
Alw21I GWGCWC 1 cut(s) 960
Alw26I GTCTC 1 cut(s) 305
AlwI GGATC 1 cut(s) 1273
AlwNI CAGNNNCTG 3 cut(s) 35, 833, 1417
AoxI GGCC 4 cut(s) 166, 219, 229, 1188
ApaI GGGCCC 1 cut(s) 170
ApeKI GCWGC 5 cut(s) 254, 686, 827, 830, 1160
ApoI RAATTY 1 cut(s) 1040
AseI ATTAAT 1 cut(s) 945
AspLEI GCGC 1 cut(s) 323
AspS9I GGNCC 2 cut(s) 166, 167
AsuHPI GGTGA 2 cut(s) 251, 444
BaeGI GKGCMC 2 cut(s) 170, 761
BalI TGGCCA 2 cut(s) 231, 1190
BanI GGYRCC 1 cut(s) 756
BanII GRGCYC 3 cut(s) 170, 960, 1326
BbsI GAAGAC 1 cut(s) 1518
Bbv12I GWGCWC 1 cut(s) 960
BbvCI CCTCAGC 1 cut(s) 1464
BbvI GCAGC 5 cut(s) 241, 673, 817, 839, 1172
BccI CCATC 8 cut(s) 182, 266, 1199, 1226, 1266, 1341, 1436, 1528
BceAI ACGGC 2 cut(s) 97, 168
BcgI CGANNNNNNTGC 2 cut(s) 236, 270
BcoDI GTCTC 1 cut(s) 305
BcuI ACTAGT 1 cut(s) 1534
BfaI CTAG 3 cut(s) 308, 653, 1535
BfmI CTRYAG 1 cut(s) 825
BfoI RGCGCY 1 cut(s) 324
BfrI CTTAAG 1 cut(s) 1360
BfuAI ACCTGC 1 cut(s) 20
BisI GCNGC 5 cut(s) 255, 687, 828, 831, 1161
BlsI GCNGC 5 cut(s) 256, 688, 829, 832, 1162
BmgT120I GGNCC 2 cut(s) 166, 167
BmiI GGNNCC 5 cut(s) 168, 169, 355, 758, 1325
BmsI GCATC 4 cut(s) 360, 892, 910, 1459
BpiI GAAGAC 1 cut(s) 1518
BpmI CTGGAG 1 cut(s) 371
Bpu10I CCTNAGC 1 cut(s) 1464
BpuEI CTTGAG 1 cut(s) 916
BsaHI GRCGYC 1 cut(s) 1499
BsaI GGTCTC 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 235
BsaWI WCCGGW 1 cut(s) 58
BsaXI ACNNNNNCTCC 6 cut(s) 845, 875, 984, 1014, 1245, 1275
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 80, 798
Bse1I ACTGG 6 cut(s) 550, 778, 863, 892, 1031, 1220
Bse3DI GCAATG 2 cut(s) 264, 581
BseDI CCNNGG 1 cut(s) 235
BseGI GGATG 7 cut(s) 22, 487, 735, 925, 1277, 1352, 1474
BseLI CCNNNNNNNGG 3 cut(s) 58, 80, 798
BseMI GCAATG 2 cut(s) 264, 581
BseMII CTCAG 2 cut(s) 230, 1455
BseNI ACTGG 6 cut(s) 550, 778, 863, 892, 1031, 1220
BseSI GKGCMC 2 cut(s) 170, 761
BseXI GCAGC 5 cut(s) 241, 673, 817, 839, 1172
BseYI CCCAGC 1 cut(s) 983
BsgI GTGCAG 1 cut(s) 48
BshFI GGCC 4 cut(s) 168, 221, 231, 1190
BshNI GGYRCC 1 cut(s) 756
BsiHKAI GWGCWC 1 cut(s) 960
BsiSI CCGG 1 cut(s) 59
BslFI GGGAC 3 cut(s) 34, 486, 1000
BslI CCNNNNNNNGG 3 cut(s) 58, 80, 798
BsmAI GTCTC 1 cut(s) 305
BsmFI GGGAC 3 cut(s) 34, 486, 1000
BsnI GGCC 4 cut(s) 168, 221, 231, 1190
Bso31I GGTCTC 1 cut(s) 305
Bsp120I GGGCCC 1 cut(s) 166
Bsp1286I GDGCHC 4 cut(s) 170, 761, 960, 1326
Bsp1407I TGTACA 1 cut(s) 732
Bsp143I GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
BspACI CCGC 3 cut(s) 171, 491, 1370
BspANI GGCC 4 cut(s) 168, 221, 231, 1190
BspCNI CTCAG 2 cut(s) 229, 1456
BspHI TCATGA 1 cut(s) 960
BspLI GGNNCC 5 cut(s) 168, 169, 355, 758, 1325
BspMAI CTGCAG 1 cut(s) 829
BspMI ACCTGC 1 cut(s) 20
BspPI GGATC 1 cut(s) 1273
BspT107I GGYRCC 1 cut(s) 756
BspTI CTTAAG 1 cut(s) 1360
BspTNI GGTCTC 1 cut(s) 305
BsrDI GCAATG 2 cut(s) 264, 581
BsrGI TGTACA 1 cut(s) 732
BsrI ACTGG 6 cut(s) 550, 778, 863, 892, 1031, 1220
BssECI CCNNGG 1 cut(s) 235
BssMI GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
BssNI GRCGYC 1 cut(s) 1499
Bst4CI ACNGT 4 cut(s) 48, 277, 1075, 1438
Bst6I CTCTTC 1 cut(s) 1307
BstACI GRCGYC 1 cut(s) 1499
BstAFI CTTAAG 1 cut(s) 1360
BstAPI GCANNNNNTGC 2 cut(s) 911, 1043
BstAUI TGTACA 1 cut(s) 732
BstC8I GCNNGC 7 cut(s) 116, 229, 319, 345, 581, 1278, 1474
BstDEI CTNAG 3 cut(s) 216, 325, 1464
BstF5I GGATG 7 cut(s) 22, 487, 735, 925, 1277, 1352, 1474
BstH2I RGCGCY 1 cut(s) 324
BstHHI GCGC 1 cut(s) 323
BstKTI GATC 6 cut(s) 40, 1080, 1125, 1174, 1268, 1392
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
BstSFI CTRYAG 1 cut(s) 825
BstSLI GKGCMC 2 cut(s) 170, 761
BstV1I GCAGC 5 cut(s) 241, 673, 817, 839, 1172
BstV2I GAAGAC 1 cut(s) 1518
BstXI CCANNNNNNTGG 1 cut(s) 374
BsuRI GGCC 4 cut(s) 168, 221, 231, 1190
BtgZI GCGATG 1 cut(s) 583
BtsCI GGATG 7 cut(s) 22, 487, 735, 925, 1277, 1352, 1474
BtsI GCAGTG 2 cut(s) 1153, 1365
BtsIMutI CAGTG 6 cut(s) 44, 273, 1080, 1153, 1365, 1415
BveI ACCTGC 1 cut(s) 20
Cac8I GCNNGC 7 cut(s) 116, 229, 319, 345, 581, 1278, 1474
CaiI CAGNNNCTG 3 cut(s) 35, 833, 1417
CciI TCATGA 1 cut(s) 960
CfoI GCGC 1 cut(s) 323
Cfr13I GGNCC 2 cut(s) 166, 167
CseI GACGC 1 cut(s) 1507
Csp6I GTAC 2 cut(s) 733, 1097
CviAII CATG 7 cut(s) 202, 396, 469, 559, 937, 961, 1281
CviQI GTAC 2 cut(s) 733, 1097
DdeI CTNAG 3 cut(s) 216, 325, 1464
DpnI GATC 6 cut(s) 39, 1079, 1124, 1173, 1267, 1391
DpnII GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
EaeI YGGCCR 2 cut(s) 229, 1188
Eam1104I CTCTTC 1 cut(s) 1307
EarI CTCTTC 1 cut(s) 1307
EciI GGCGGA 1 cut(s) 506
Ecl136II GAGCTC 1 cut(s) 958
Eco147I AGGCCT 1 cut(s) 221
Eco24I GRGCYC 3 cut(s) 170, 960, 1326
Eco31I GGTCTC 1 cut(s) 305
Eco32I GATATC 1 cut(s) 703
Eco53kI GAGCTC 1 cut(s) 958
Eco57I CTGAAG 2 cut(s) 163, 605
EcoICRI GAGCTC 1 cut(s) 958
EcoO109I RGGNCCY 1 cut(s) 167
EcoRV GATATC 1 cut(s) 703
EcoT38I GRGCYC 3 cut(s) 170, 960, 1326
FaeI CATG 7 cut(s) 205, 399, 472, 562, 940, 964, 1284
FalI AAGNNNNNCTT 4 cut(s) 102, 134, 234, 266
FaqI GGGAC 3 cut(s) 34, 486, 1000
FatI CATG 7 cut(s) 201, 395, 468, 558, 936, 960, 1280
FauI CCCGC 2 cut(s) 178, 1363
FblI GTMKAC 1 cut(s) 1496
Fnu4HI GCNGC 5 cut(s) 255, 687, 828, 831, 1161
FokI GGATG 7 cut(s) 29, 494, 742, 932, 1284, 1359, 1481
FriOI GRGCYC 3 cut(s) 170, 960, 1326
Fsp4HI GCNGC 5 cut(s) 255, 687, 828, 831, 1161
FspBI CTAG 3 cut(s) 308, 653, 1535
GlaI GCGC 1 cut(s) 322
GluI GCNGC 5 cut(s) 255, 687, 828, 831, 1161
GsaI CCCAGC 1 cut(s) 987
GsuI CTGGAG 1 cut(s) 371
HaeII RGCGCY 1 cut(s) 324
HaeIII GGCC 4 cut(s) 168, 221, 231, 1190
HapII CCGG 1 cut(s) 59
HgaI GACGC 1 cut(s) 1507
HhaI GCGC 1 cut(s) 323
Hin1I GRCGYC 1 cut(s) 1499
Hin1II CATG 7 cut(s) 205, 399, 472, 562, 940, 964, 1284
Hin6I GCGC 1 cut(s) 321
HinP1I GCGC 1 cut(s) 321
HincII GTYRAC 1 cut(s) 1497
HindII GTYRAC 1 cut(s) 1497
HindIII AAGCTT 1 cut(s) 116
HinfI GANTC 6 cut(s) 62, 140, 457, 567, 964, 1067
HpaII CCGG 1 cut(s) 59
HphI GGTGA 2 cut(s) 251, 444
Hpy166II GTNNAC 4 cut(s) 639, 1071, 1097, 1497
Hpy188I TCNGA 3 cut(s) 37, 1231, 1525
Hpy188III TCNNGA 4 cut(s) 388, 961, 1269, 1508
Hpy8I GTNNAC 4 cut(s) 639, 1071, 1097, 1497
Hpy99I CGWCG 2 cut(s) 287, 1501
HpyAV CCTTC 6 cut(s) 6, 104, 232, 802, 985, 1024
HpyCH4III ACNGT 4 cut(s) 48, 277, 1075, 1438
HpyCH4IV ACGT 1 cut(s) 1480
HpyCH4V TGCA 8 cut(s) 29, 532, 562, 574, 827, 905, 936, 1046
HpyF3I CTNAG 3 cut(s) 216, 325, 1464
HpySE526I ACGT 1 cut(s) 1480
Hsp92I GRCGYC 1 cut(s) 1499
Hsp92II CATG 7 cut(s) 205, 399, 472, 562, 940, 964, 1284
HspAI GCGC 1 cut(s) 321
Kzo9I GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
LmnI GCTCC 5 cut(s) 353, 493, 955, 1016, 1329
Lsp1109I GCAGC 5 cut(s) 241, 673, 817, 839, 1172
LweI GCATC 4 cut(s) 360, 892, 910, 1459
MaeI CTAG 3 cut(s) 308, 653, 1535
MaeII ACGT 1 cut(s) 1480
MaeIII GTNAC 2 cut(s) 211, 1060
MalI GATC 6 cut(s) 39, 1079, 1124, 1173, 1267, 1391
MboI GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
MboII GAAGA 6 cut(s) 57, 169, 372, 598, 1294, 1523
MhlI GDGCHC 4 cut(s) 170, 761, 960, 1326
MlsI TGGCCA 2 cut(s) 231, 1190
MluCI AATT 5 cut(s) 292, 809, 1040, 1197, 1540
MluNI TGGCCA 2 cut(s) 231, 1190
MlyI GAGTC 2 cut(s) 149, 1076
MmeI TCCRAC 1 cut(s) 645
Mox20I TGGCCA 2 cut(s) 231, 1190
MscI TGGCCA 2 cut(s) 231, 1190
MseI TTAA 6 cut(s) 462, 630, 945, 1206, 1355, 1361
MslI CAYNNNNRTG 1 cut(s) 237
Msp20I TGGCCA 2 cut(s) 231, 1190
MspA1I CMGCKG 2 cut(s) 583, 830
MspCI CTTAAG 1 cut(s) 1360
MspI CCGG 1 cut(s) 59
NdeII GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
NlaIII CATG 7 cut(s) 205, 399, 472, 562, 940, 964, 1284
NlaIV GGNNCC 5 cut(s) 168, 169, 355, 758, 1325
NmuCI GTSAC 1 cut(s) 1060
OliI CACNNNNGTG 1 cut(s) 237
PagI TCATGA 1 cut(s) 960
PceI AGGCCT 1 cut(s) 221
PcsI WCGNNNNNNNCGW 2 cut(s) 243, 1164
PfeI GAWTC 4 cut(s) 62, 457, 567, 964
PflFI GACNNNGTC 1 cut(s) 1066
PkrI GCNGC 5 cut(s) 256, 688, 829, 832, 1162
PleI GAGTC 2 cut(s) 148, 1075
PpsI GAGTC 2 cut(s) 148, 1075
PshBI ATTAAT 1 cut(s) 945
Psp124BI GAGCTC 1 cut(s) 960
PspFI CCCAGC 1 cut(s) 983
PspN4I GGNNCC 5 cut(s) 168, 169, 355, 758, 1325
PspOMI GGGCCC 1 cut(s) 166
PspPI GGNCC 2 cut(s) 166, 167
PsrI GAACNNNNNNTAC 2 cut(s) 848, 880
PstI CTGCAG 1 cut(s) 829
PstNI CAGNNNCTG 3 cut(s) 35, 833, 1417
PsyI GACNNNGTC 1 cut(s) 1066
PvuII CAGCTG 2 cut(s) 583, 830
RsaI GTAC 2 cut(s) 734, 1098
RsaNI GTAC 2 cut(s) 733, 1097
RseI CAYNNNNRTG 1 cut(s) 237
SacI GAGCTC 1 cut(s) 960
SalI GTCGAC 1 cut(s) 1495
SaqAI TTAA 6 cut(s) 462, 630, 945, 1206, 1355, 1361
SatI GCNGC 5 cut(s) 255, 687, 828, 831, 1161
Sau3AI GATC 6 cut(s) 37, 1077, 1122, 1171, 1265, 1389
Sau96I GGNCC 2 cut(s) 166, 167
SchI GAGTC 2 cut(s) 149, 1076
SduI GDGCHC 4 cut(s) 170, 761, 960, 1326
SfaNI GCATC 4 cut(s) 360, 892, 910, 1459
SfcI CTRYAG 1 cut(s) 825
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 2 cut(s) 895, 1360
SmoI CTYRAG 2 cut(s) 895, 1360
SpeI ACTAGT 1 cut(s) 1534
Sse9I AATT 5 cut(s) 292, 809, 1040, 1197, 1540
SseBI AGGCCT 1 cut(s) 221
SsiI CCGC 3 cut(s) 171, 491, 1370
SspMI CTAG 3 cut(s) 308, 653, 1535
SstI GAGCTC 1 cut(s) 960
StuI AGGCCT 1 cut(s) 221
TaaI ACNGT 4 cut(s) 48, 277, 1075, 1438
TaiI ACGT 1 cut(s) 1483
TaqI TCGA 3 cut(s) 246, 1167, 1496
TaqII GACCGA 1 cut(s) 287
TasI AATT 5 cut(s) 292, 809, 1040, 1197, 1540
TatI WGTACW 2 cut(s) 732, 1096
TfiI GAWTC 4 cut(s) 62, 457, 567, 964
Tru1I TTAA 6 cut(s) 462, 630, 945, 1206, 1355, 1361
Tru9I TTAA 6 cut(s) 462, 630, 945, 1206, 1355, 1361
TscAI CASTG 6 cut(s) 51, 280, 1080, 1153, 1372, 1422
TseFI GTSAC 1 cut(s) 1060
TseI GCWGC 5 cut(s) 254, 686, 827, 830, 1160
Tsp45I GTSAC 1 cut(s) 1060
TspDTI ATGAA 3 cut(s) 33, 218, 802
TspGWI ACGGA 2 cut(s) 112, 494
TspRI CASTG 6 cut(s) 51, 280, 1080, 1153, 1372, 1422
Tth111I GACNNNGTC 1 cut(s) 1066
Vha464I CTTAAG 1 cut(s) 1360
VspI ATTAAT 1 cut(s) 945
XapI RAATTY 1 cut(s) 1040
XmiI GTMKAC 1 cut(s) 1496
XspI CTAG 3 cut(s) 308, 653, 1535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.