FvH4_7g30730

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000476
Physical Location & Seq
Reverse (-)
22307200 .. 22313009
5810 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30730.t2

Sequence Viewer

Length: 1506 bp
ATGCCCGGTAATACAAACAGTTGTGCGTTAGCGGAAGCAGAGGCTCCGTTGTTGGCGGCGTACTCAGCTTCAGACGACGTCGGTTTAAAACACGAACGTCACGATGAGCTCATTGATGAAGATGACGATCAACGTCTTGGAAGGAGAGTCTGGATTGAATCAAAGAAGCTTTGGCACATAGTCGGTCCGGCTATCTTTAGCCGTGTCGCCTCCTATTCCATGCTGGTCATCACCCAAGCTTTCGCCGGCCACCTCGGCGAACTAGAGCTCGCCGCAATCTCCATCGCCAATAATGTCATCGTCGGTTTCGATTTCGGCCTCTTGTTAGGAATGGCGAGTGCTTTGGAAACACTATGTGGGCAAGCTTATGGTGCCAAGAAGTACTATATGCTTGGAGTGTACATGCAACGCTCATGGATAGTTCTCTTCTTGTGTTCTATTCTCCTCCTGCCGCTCTACCTCTTCGCCTCGCCGTTCCTAAAGGTTTTAGGTCAGCCAACAGACGTGGCCGAGCTCTGTGGGATTGTGTCCATGACCATGATACCGATTCACTTCAGCTTCAGCTTTCAGTTCCCGCTTCAGAGGTTTCTACAGAGCCAGCTGAAGACTGGTGTGATTGCTTGGGTGTCTCTGGTGGCTCTGATTTTCCATATCTTTGTGAGTTGGTTCTTTGTGTACAGGCTTGAGCTTGGAGTGATCGGAACCGCCGTTACGTTGAGCCTTTCGTGGTGGGTGTTAGCTTTCGGGCTTTTCTTTTACACTATTTGCGGTGGCTGTCCTTTAACTTGGAGTGGATTCTCCATTGAAGCGTTTTCTGGTCTTTGGGAGTTCATCAAACTCTCTGCTGCTTCTGGAGTTATGCTCTGCCTGGAGAATTGGTATTATAGAATACTAATACTGATGACAGGAAATCTGCAAAATGCAAAGATTGCTGTGGATGCTTTGTCTATATGCATGACCATAAACGGCTGGGAGCTGATGATTCCTCTGGCTTTCTTCGCTGCAACTGGAGTGAGGGTTGCAAATGAGCTTGGAGCTGGGAATGGGAAGGCAGCCAAGTTTGCAACTAAAGTAGCAGTTGTGACCTCTGTTATAATTGGCCTCTTCTTCTGGGTTTTGATTATGATGTTCCACACTGAGATCGGCTATATATTTACCAACAGTATACCTGTCATCACTGAAGTAAACAAACTCTCCCTCCTCTTGGCATTCACAATTCTTCTCAACAGTGTCCAGCCTATTCTCTCTGGAGTGGCTGTGGGATCTGGGTGGCAATCATATGTGGCATACATAAACTTGGGTTGCTATTATCTAATTGGAGTGCCATTAGGGTTTCTCATGGGATGGGGTTTCCATCAAGGAGTTATGGGAATTTGGGCTGGAATGATTTTTGGAGGGACAGCAGTCCAAACCTTGATACTGGCCATCATTACCATTAGATGTGACTGGGAAAAAGAGGCAGAGAAGGCAAGCATGCATGTACTGAAGTGGGCAGACAAACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0006810 GO:0006855 GO:0008150 GO:0015238 GO:0015893 GO:0022857 GO:0042221 GO:0042493 GO:0050896 GO:0051179 GO:0051234 GO:0055085
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

502

Amino Acids

55.23

Weight (kDa)

6.0

Isoelectric Point (pI)

28.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 7 - 131 1.8e-21 MatE
MatE PF01554 194 - 355 1.6e-26 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1094
AatII GACGTC 1 cut(s) 81
AccB1I GGYRCC 1 cut(s) 371
AccBSI CCGCTC 1 cut(s) 454
AccI GTMKAC 1 cut(s) 1165
AciI CCGC 7 cut(s) 32, 56, 273, 452, 575, 705, 768
AclWI GGATC 1 cut(s) 1270
AcoI YGGCCR 3 cut(s) 247, 507, 1422
AcsI RAATTY 1 cut(s) 1371
AcuI CTGAAG 7 cut(s) 54, 538, 544, 563, 623, 1200, 1505
AcyI GRCGYC 1 cut(s) 78
AdeI CACNNNGTG 1 cut(s) 356
AfaI GTAC 5 cut(s) 62, 383, 401, 677, 1482
AfiI CCNNNNNNNGG 1 cut(s) 1204
AgsI TTSAA 2 cut(s) 158, 806
AjiI CACGTC 1 cut(s) 505
AjnI CCWGG 1 cut(s) 867
Alw21I GWGCWC 3 cut(s) 111, 270, 516
Alw26I GTCTC 1 cut(s) 633
AlwI GGATC 1 cut(s) 1270
AoxI GGCC 5 cut(s) 247, 316, 507, 1099, 1422
ApeKI GCWGC 3 cut(s) 845, 1001, 1052
ApoI RAATTY 1 cut(s) 1371
AspS9I GGNCC 1 cut(s) 185
AsuC2I CCSGG 1 cut(s) 6
AsuHPI GGTGA 1 cut(s) 223
AvaII GGWCC 1 cut(s) 185
BalI TGGCCA 1 cut(s) 1424
BanI GGYRCC 1 cut(s) 371
BanII GRGCYC 3 cut(s) 111, 270, 516
BbsI GAAGAC 1 cut(s) 611
Bbv12I GWGCWC 3 cut(s) 111, 270, 516
BbvI GCAGC 3 cut(s) 832, 988, 1064
BccI CCATC 4 cut(s) 290, 1338, 1362, 1433
BceAI ACGGC 4 cut(s) 186, 457, 692, 982
BciT130I CCWGG 1 cut(s) 869
BcnI CCSGG 1 cut(s) 6
BcoDI GTCTC 1 cut(s) 633
BfaI CTAG 1 cut(s) 263
BfmI CTRYAG 1 cut(s) 590
BglI GCCNNNNNGGC 1 cut(s) 255
BisI GCNGC 6 cut(s) 57, 273, 452, 846, 1002, 1053
BlsI GCNGC 6 cut(s) 58, 274, 453, 847, 1003, 1054
BmcAI AGTACT 1 cut(s) 383
Bme1390I CCNGG 2 cut(s) 6, 869
Bme18I GGWCC 1 cut(s) 185
BmgBI CACGTC 1 cut(s) 505
BmgT120I GGNCC 1 cut(s) 185
BmiI GGNNCC 3 cut(s) 45, 373, 703
BmrFI CCNGG 2 cut(s) 6, 869
BmrI ACTGGG 1 cut(s) 1456
BmsI GCATC 1 cut(s) 928
BmuI ACTGGG 1 cut(s) 1456
BoxI GACNNNNGTC 1 cut(s) 1403
BpiI GAAGAC 1 cut(s) 611
BplI GAGNNNNNCTC 2 cut(s) 846, 878
BpmI CTGGAG 4 cut(s) 873, 890, 1029, 1269
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 1 cut(s) 6
BsaBI GATNNNNATC 1 cut(s) 126
BsaHI GRCGYC 1 cut(s) 78
BsaJI CCNNGG 1 cut(s) 253
Bsc4I CCNNNNNNNGG 1 cut(s) 1204
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 4 cut(s) 613, 1012, 1425, 1451
Bse8I GATNNNNATC 1 cut(s) 126
BseBI CCWGG 1 cut(s) 869
BseDI CCNNGG 1 cut(s) 253
BseGI GGATG 2 cut(s) 943, 1349
BseJI GATNNNNATC 1 cut(s) 126
BseLI CCNNNNNNNGG 1 cut(s) 1204
BseMII CTCAG 2 cut(s) 78, 1128
BseNI ACTGG 4 cut(s) 613, 1012, 1425, 1451
BseRI GAGGAG 2 cut(s) 434, 1190
BseXI GCAGC 3 cut(s) 832, 988, 1064
BseYI CCCAGC 2 cut(s) 969, 1037
BshFI GGCC 5 cut(s) 249, 318, 509, 1101, 1424
BshNI GGYRCC 1 cut(s) 371
BsiHKAI GWGCWC 3 cut(s) 111, 270, 516
BsiSI CCGG 3 cut(s) 6, 188, 246
BslFI GGGAC 1 cut(s) 1411
BslI CCNNNNNNNGG 1 cut(s) 1204
BsmAI GTCTC 1 cut(s) 633
BsmFI GGGAC 1 cut(s) 1411
BsmI GAATGC 1 cut(s) 1208
BsnI GGCC 5 cut(s) 249, 318, 509, 1101, 1424
Bsp1286I GDGCHC 3 cut(s) 111, 270, 516
Bsp1407I TGTACA 2 cut(s) 399, 675
Bsp143I GATC 4 cut(s) 127, 696, 1140, 1262
BspACI CCGC 7 cut(s) 32, 56, 273, 452, 575, 705, 768
BspANI GGCC 5 cut(s) 249, 318, 509, 1101, 1424
BspCNI CTCAG 2 cut(s) 77, 1129
BspLI GGNNCC 3 cut(s) 45, 373, 703
BspPI GGATC 1 cut(s) 1270
BspT107I GGYRCC 1 cut(s) 371
BsrBI CCGCTC 1 cut(s) 454
BsrFI RCCGGY 1 cut(s) 245
BsrGI TGTACA 2 cut(s) 399, 675
BsrI ACTGG 4 cut(s) 613, 1012, 1425, 1451
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 1 cut(s) 253
BssMI GATC 4 cut(s) 127, 696, 1140, 1262
BssNAI GTATAC 1 cut(s) 1166
BssNI GRCGYC 1 cut(s) 78
Bst1107I GTATAC 1 cut(s) 1166
Bst2UI CCWGG 1 cut(s) 869
Bst4CI ACNGT 3 cut(s) 20, 1163, 1229
Bst6I CTCTTC 3 cut(s) 431, 467, 1109
BstACI GRCGYC 1 cut(s) 78
BstAPI GCANNNNNTGC 1 cut(s) 929
BstAUI TGTACA 2 cut(s) 399, 675
BstC8I GCNNGC 6 cut(s) 247, 270, 363, 599, 1471, 1475
BstDEI CTNAG 2 cut(s) 64, 1137
BstF5I GGATG 2 cut(s) 943, 1349
BstKTI GATC 4 cut(s) 130, 699, 1143, 1265
BstMAI GTCTC 1 cut(s) 633
BstMBI GATC 4 cut(s) 127, 696, 1140, 1262
BstMWI GCNNNNNNNGC 8 cut(s) 65, 255, 371, 929, 938, 998, 1061, 1466
BstNI CCWGG 1 cut(s) 869
BstNSI RCATGY 3 cut(s) 406, 1477, 1481
BstPAI GACNNNNGTC 1 cut(s) 1403
BstSCI CCNGG 2 cut(s) 4, 867
BstSFI CTRYAG 1 cut(s) 590
BstV1I GCAGC 3 cut(s) 832, 988, 1064
BstV2I GAAGAC 1 cut(s) 611
BstX2I RGATCY 1 cut(s) 1262
BstYI RGATCY 1 cut(s) 1262
BstZ17I GTATAC 1 cut(s) 1166
BsuRI GGCC 5 cut(s) 249, 318, 509, 1101, 1424
BtgZI GCGATG 1 cut(s) 268
BtrI CACGTC 1 cut(s) 505
BtsCI GGATG 2 cut(s) 943, 1349
BtsIMutI CAGTG 3 cut(s) 1134, 1176, 1234
Cac8I GCNNGC 6 cut(s) 247, 270, 363, 599, 1471, 1475
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 1 cut(s) 185
CpoI CGGWCCG 1 cut(s) 185
Csp6I GTAC 5 cut(s) 61, 382, 400, 676, 1481
CspCI CAANNNNNGTGG 2 cut(s) 486, 521
CspI CGGWCCG 1 cut(s) 185
CviAII CATG 9 cut(s) 220, 403, 414, 532, 538, 955, 1339, 1474, 1478
CviQI GTAC 5 cut(s) 61, 382, 400, 676, 1481
DdeI CTNAG 2 cut(s) 64, 1137
DpnI GATC 4 cut(s) 129, 698, 1142, 1264
DpnII GATC 4 cut(s) 127, 696, 1140, 1262
DraI TTTAAA 1 cut(s) 87
DraIII CACNNNGTG 1 cut(s) 356
EaeI YGGCCR 3 cut(s) 247, 507, 1422
Eam1104I CTCTTC 3 cut(s) 431, 467, 1109
EarI CTCTTC 3 cut(s) 431, 467, 1109
Ecl136II GAGCTC 3 cut(s) 109, 268, 514
Eco24I GRGCYC 3 cut(s) 111, 270, 516
Eco47I GGWCC 1 cut(s) 185
Eco53kI GAGCTC 3 cut(s) 109, 268, 514
Eco57I CTGAAG 7 cut(s) 54, 538, 544, 563, 623, 1200, 1505
EcoICRI GAGCTC 3 cut(s) 109, 268, 514
EcoRII CCWGG 1 cut(s) 867
EcoT22I ATGCAT 2 cut(s) 956, 1479
EcoT38I GRGCYC 3 cut(s) 111, 270, 516
FaeI CATG 9 cut(s) 223, 406, 417, 535, 541, 958, 1342, 1477, 1481
FaqI GGGAC 1 cut(s) 1411
FatI CATG 9 cut(s) 219, 402, 413, 531, 537, 954, 1338, 1473, 1477
FauI CCCGC 1 cut(s) 582
FauNDI CATATG 1 cut(s) 1279
FblI GTMKAC 1 cut(s) 1165
Fnu4HI GCNGC 6 cut(s) 57, 273, 452, 846, 1002, 1053
FokI GGATG 2 cut(s) 950, 1356
FriOI GRGCYC 3 cut(s) 111, 270, 516
Fsp4HI GCNGC 6 cut(s) 57, 273, 452, 846, 1002, 1053
FspBI CTAG 1 cut(s) 263
GluI GCNGC 6 cut(s) 57, 273, 452, 846, 1002, 1053
GsaI CCCAGC 2 cut(s) 973, 1041
GsuI CTGGAG 4 cut(s) 873, 890, 1029, 1269
HaeIII GGCC 5 cut(s) 249, 318, 509, 1101, 1424
HapII CCGG 3 cut(s) 6, 188, 246
Hin1I GRCGYC 1 cut(s) 78
Hin1II CATG 9 cut(s) 223, 406, 417, 535, 541, 958, 1342, 1477, 1481
HindIII AAGCTT 3 cut(s) 167, 237, 363
HinfI GANTC 5 cut(s) 147, 158, 547, 795, 982
HpaII CCGG 3 cut(s) 6, 188, 246
HphI GGTGA 1 cut(s) 223
Hpy166II GTNNAC 4 cut(s) 400, 676, 1166, 1186
Hpy188I TCNGA 4 cut(s) 73, 582, 642, 701
Hpy188III TCNNGA 4 cut(s) 101, 151, 852, 1248
Hpy8I GTNNAC 4 cut(s) 400, 676, 1166, 1186
Hpy99I CGWCG 3 cut(s) 80, 83, 305
HpyAV CCTTC 3 cut(s) 135, 1042, 1459
HpyCH4III ACNGT 3 cut(s) 20, 1163, 1229
HpyCH4IV ACGT 5 cut(s) 78, 97, 133, 504, 713
HpyCH4V TGCA 8 cut(s) 406, 916, 923, 954, 1004, 1022, 1064, 1477
HpyF10VI GCNNNNNNNGC 8 cut(s) 65, 255, 371, 929, 938, 998, 1061, 1466
HpyF3I CTNAG 2 cut(s) 64, 1137
HpySE526I ACGT 5 cut(s) 78, 97, 133, 504, 713
Hsp92I GRCGYC 1 cut(s) 78
Hsp92II CATG 9 cut(s) 223, 406, 417, 535, 541, 958, 1342, 1477, 1481
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
Kzo9I GATC 4 cut(s) 127, 696, 1140, 1262
LmnI GCTCC 3 cut(s) 49, 973, 1034
Lsp1109I GCAGC 3 cut(s) 832, 988, 1064
LweI GCATC 1 cut(s) 928
MaeI CTAG 1 cut(s) 263
MaeII ACGT 5 cut(s) 78, 97, 133, 504, 713
MaeIII GTNAC 4 cut(s) 98, 709, 1081, 1442
MalI GATC 4 cut(s) 129, 698, 1142, 1264
MbiI CCGCTC 1 cut(s) 454
MboI GATC 4 cut(s) 127, 696, 1140, 1262
MboII GAAGA 8 cut(s) 131, 418, 454, 616, 988, 1096, 1099, 1211
MflI RGATCY 1 cut(s) 1262
MhlI GDGCHC 3 cut(s) 111, 270, 516
MlsI TGGCCA 1 cut(s) 1424
MluCI AATT 5 cut(s) 874, 1095, 1215, 1314, 1371
MluNI TGGCCA 1 cut(s) 1424
MlyI GAGTC 1 cut(s) 156
Mox20I TGGCCA 1 cut(s) 1424
Mph1103I ATGCAT 2 cut(s) 956, 1479
MroNI GCCGGC 1 cut(s) 245
MscI TGGCCA 1 cut(s) 1424
MseI TTAA 2 cut(s) 86, 782
MslI CAYNNNNRTG 1 cut(s) 536
Msp20I TGGCCA 1 cut(s) 1424
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 3 cut(s) 6, 188, 246
MspR9I CCNGG 2 cut(s) 6, 869
Mva1269I GAATGC 1 cut(s) 1208
MvaI CCWGG 1 cut(s) 869
MwoI GCNNNNNNNGC 8 cut(s) 65, 255, 371, 929, 938, 998, 1061, 1466
NaeI GCCGGC 1 cut(s) 247
NciI CCSGG 1 cut(s) 6
NdeI CATATG 1 cut(s) 1279
NdeII GATC 4 cut(s) 127, 696, 1140, 1262
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 9 cut(s) 223, 406, 417, 535, 541, 958, 1342, 1477, 1481
NlaIV GGNNCC 3 cut(s) 45, 373, 703
NmeAIII GCCGAG 2 cut(s) 234, 535
NmuCI GTSAC 3 cut(s) 98, 1081, 1442
NsiI ATGCAT 2 cut(s) 956, 1479
NspI RCATGY 3 cut(s) 406, 1477, 1481
PaeI GCATGC 1 cut(s) 1477
PcsI WCGNNNNNNNCGW 3 cut(s) 99, 306, 705
PctI GAATGC 1 cut(s) 1208
PdiI GCCGGC 1 cut(s) 247
PfeI GAWTC 4 cut(s) 158, 547, 795, 982
PflFI GACNNNGTC 1 cut(s) 77
PkrI GCNGC 6 cut(s) 58, 274, 453, 847, 1003, 1054
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PshAI GACNNNNGTC 1 cut(s) 1403
PsiI TTATAA 1 cut(s) 1094
Psp124BI GAGCTC 3 cut(s) 111, 270, 516
Psp6I CCWGG 1 cut(s) 867
PspFI CCCAGC 2 cut(s) 969, 1037
PspGI CCWGG 1 cut(s) 867
PspN4I GGNNCC 3 cut(s) 45, 373, 703
PspPI GGNCC 1 cut(s) 185
PsrI GAACNNNNNNTAC 2 cut(s) 694, 726
PsuI RGATCY 1 cut(s) 1262
PsyI GACNNNGTC 1 cut(s) 77
PvuII CAGCTG 1 cut(s) 601
RsaI GTAC 5 cut(s) 62, 383, 401, 677, 1482
RsaNI GTAC 5 cut(s) 61, 382, 400, 676, 1481
RseI CAYNNNNRTG 1 cut(s) 536
Rsr2I CGGWCCG 1 cut(s) 185
RsrII CGGWCCG 1 cut(s) 185
SacI GAGCTC 3 cut(s) 111, 270, 516
SaqAI TTAA 2 cut(s) 86, 782
SatI GCNGC 6 cut(s) 57, 273, 452, 846, 1002, 1053
Sau3AI GATC 4 cut(s) 127, 696, 1140, 1262
Sau96I GGNCC 1 cut(s) 185
ScaI AGTACT 1 cut(s) 383
SchI GAGTC 1 cut(s) 156
ScrFI CCNGG 2 cut(s) 6, 869
SduI GDGCHC 3 cut(s) 111, 270, 516
SfaNI GCATC 1 cut(s) 928
SfcI CTRYAG 1 cut(s) 590
SinI GGWCC 1 cut(s) 185
SmiMI CAYNNNNRTG 1 cut(s) 536
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
SphI GCATGC 1 cut(s) 1477
Sse9I AATT 5 cut(s) 874, 1095, 1215, 1314, 1371
SsiI CCGC 7 cut(s) 32, 56, 273, 452, 575, 705, 768
SspMI CTAG 1 cut(s) 263
SstI GAGCTC 3 cut(s) 111, 270, 516
StyD4I CCNGG 2 cut(s) 4, 867
TaaI ACNGT 3 cut(s) 20, 1163, 1229
TaiI ACGT 5 cut(s) 81, 100, 136, 507, 716
TaqI TCGA 1 cut(s) 309
TaqII GACCGA 1 cut(s) 173
TasI AATT 5 cut(s) 874, 1095, 1215, 1314, 1371
TatI WGTACW 4 cut(s) 381, 399, 675, 1480
TauI GCSGC 3 cut(s) 59, 275, 454
TfiI GAWTC 4 cut(s) 158, 547, 795, 982
Tru1I TTAA 2 cut(s) 86, 782
Tru9I TTAA 2 cut(s) 86, 782
TscAI CASTG 3 cut(s) 1141, 1183, 1234
TseFI GTSAC 3 cut(s) 98, 1081, 1442
TseI GCWGC 3 cut(s) 845, 1001, 1052
Tsp45I GTSAC 3 cut(s) 98, 1081, 1442
TspDTI ATGAA 2 cut(s) 132, 820
TspGWI ACGGA 1 cut(s) 36
TspRI CASTG 3 cut(s) 1141, 1183, 1234
Tth111I GACNNNGTC 1 cut(s) 77
VpaK11BI GGWCC 1 cut(s) 185
XapI RAATTY 1 cut(s) 1371
XceI RCATGY 3 cut(s) 406, 1477, 1481
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XmiI GTMKAC 1 cut(s) 1165
XspI CTAG 1 cut(s) 263
ZraI GACGTC 1 cut(s) 79
ZrmI AGTACT 1 cut(s) 383
Zsp2I ATGCAT 2 cut(s) 956, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.