RLG00000017947

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
23459738 .. 23464564
4827 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017947

Sequence Viewer

Length: 1500 bp
ATGCCCAGTAAAACAAACACTGCATTAATGGAAGAAGAGGCTCCGTTGCTGGCGGAGTACTCAGCTTCAGACGTTGGTTTAAAACACGAAAATCACGATGTTGAGCTCATTGATGAAGATAATCAACGTCTTGGAAGGAGAGTCTGGATTGAATCAACGAAGCTTTGGCACATAGTCGGTCCGGCAATCTTTAGCCGTGTGGCCTCCTATTCCATGCTGGTGATCACCCAAGCTTTCGCCGGCCACCTCGGCGACTTAGAGCTCGCCGCAATCTCCATTGCCAATAATGTCATCGTTGGTTTCGATTTCGGCCTCTTGTTGGGAATGGCGAGTGCTTTGGAAACACTGTGTGGGCAAGCTTATGGTGCGAAGAAGTACTATATGCTTGGAGTGTACATGCAGCGCTCATGGATAGTTCTCTTCTTGTGTTGTATTCTCCTTCTACCGCTCTACCTCTTCGCCTCGCCGGTCCTAAAGCTATTAGGCCAACCGACCGACGTGGCCGAGCTCTGTGGGATTGTGTCCATGGCCATGATACCGCTTCACTTCAGCTTCGCGTTTCAGTTTCCGCTGCAGAGGTTCTTGCAGAGCCAGCTGAAGACGGGTGTGATTGCCTGGGTGTCTCTGGCGGCTCTGATTGTTCATATCTTTGTGAGTTGGTTCTTTGTCTATAGGCTTGAGCTTGGAGTGGTCGGAACCGCCATTACCTTGAATTTTTCGTGGTGGGTTTTGACTTTCGGGCTTTTCTTTTACACTATTTGTGGTGGCTGTCCTATAACTTGGGGTGGATTCTCCATCGAAGCGTTTTCTGGTCTTTGGGAGTTCATCAAACTCTCTGCTGCTTCTGGAGTTATGCTCTGCCTGGAGAATTGGTATTATAGAATACTAATACTGATGACCGGAAATCTACAAAATGCAAAGATTGCTGTGGATGCTTTGTCTATATGCATGACCATTAACGGCTGGGAGTTGATGATTCCTCTGGCTTTCTTCGCTGCAACTGGAGTGAGGGTTGCAAATGAGCTTGGAGCTGGGAATGGCAAGGCAGCCAAGTTTGCAACTAAAGTAGCAGTTATGACCTCTGTTATAATTGGCCTCTTCTTCTGGGTTTTGATAATGATGTTCCACAACGAGGTCGGCTATATATTTACCAACAGTAAACCTGTCCTTACTGAAGTAAACAAACTCTCCCTCCTCTTGGCATTTACAATTCTTCTCAACAGTGTCCAACCTGTTCTCTCTGGGGTGGCTGTGGGATCTGGGTGGCAATCGTATGTGGCATACATAAACTTGGGTTGCTATTATTTCATTGGGGTGCCACTAGGGTTTCTCATGGGATGGGTTTTCCATCAAGGAGTTATGGGAATTTGGGCTGGAATGATTTTTGGAGGGACAGCAGTCCAAACCTTGATATTGGCCATCATTACCATTAGATGCGACTGGGAAAAAGAGGCAGAGAAGGCAAGCATGCATGTACTGAAGTGGGCAGACAAAAGATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

500

Amino Acids

55.2

Weight (kDa)

6.31

Isoelectric Point (pI)

28.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 61 - 220 2.3e-30 MatE
MatE PF01554 283 - 444 1.3e-26 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1088
AccB1I GGYRCC 1 cut(s) 1315
AccBSI CCGCTC 1 cut(s) 448
AccII CGCG 1 cut(s) 557
AciI CCGC 7 cut(s) 53, 267, 446, 539, 569, 629, 699
AclWI GGATC 1 cut(s) 1264
AcoI YGGCCR 4 cut(s) 241, 501, 528, 1416
AcsI RAATTY 2 cut(s) 712, 1365
AcuI CTGAAG 5 cut(s) 51, 532, 617, 1194, 1499
AdeI CACNNNGTG 1 cut(s) 350
AfaI GTAC 4 cut(s) 59, 377, 395, 1476
AfeI AGCGCT 1 cut(s) 404
AfiI CCNNNNNNNGG 3 cut(s) 319, 1132, 1198
AgsI TTSAA 2 cut(s) 152, 712
AjiI CACGTC 1 cut(s) 499
AjnI CCWGG 2 cut(s) 614, 861
Alw21I GWGCWC 3 cut(s) 108, 264, 510
Alw26I GTCTC 1 cut(s) 627
AlwI GGATC 1 cut(s) 1264
Aor51HI AGCGCT 1 cut(s) 404
AoxI GGCC 8 cut(s) 201, 241, 310, 484, 501, 528, 1093, 1416
ApeKI GCWGC 5 cut(s) 400, 571, 839, 995, 1046
ApoI RAATTY 2 cut(s) 712, 1365
AseI ATTAAT 1 cut(s) 26
AspLEI GCGC 1 cut(s) 405
AspS9I GGNCC 2 cut(s) 179, 469
AsuHPI GGTGA 2 cut(s) 217, 232
AvaII GGWCC 2 cut(s) 179, 469
BalI TGGCCA 2 cut(s) 530, 1418
BanI GGYRCC 1 cut(s) 1315
BanII GRGCYC 3 cut(s) 108, 264, 510
BbsI GAAGAC 1 cut(s) 605
Bbv12I GWGCWC 3 cut(s) 108, 264, 510
BbvI GCAGC 5 cut(s) 412, 558, 826, 982, 1058
BccI CCATC 4 cut(s) 803, 1332, 1356, 1427
BceAI ACGGC 2 cut(s) 180, 976
BciT130I CCWGG 2 cut(s) 616, 863
BclI TGATCA 1 cut(s) 222
BcoDI GTCTC 1 cut(s) 627
BfaI CTAG 1 cut(s) 1322
BfmI CTRYAG 2 cut(s) 572, 670
BfoI RGCGCY 1 cut(s) 406
BglI GCCNNNNNGGC 1 cut(s) 249
BisI GCNGC 7 cut(s) 267, 401, 572, 630, 840, 996, 1047
BlsI GCNGC 7 cut(s) 268, 402, 573, 631, 841, 997, 1048
BmcAI AGTACT 2 cut(s) 59, 377
Bme1390I CCNGG 2 cut(s) 616, 863
Bme18I GGWCC 2 cut(s) 179, 469
BmgBI CACGTC 1 cut(s) 499
BmgT120I GGNCC 2 cut(s) 179, 469
BmiI GGNNCC 3 cut(s) 42, 697, 1317
BmrFI CCNGG 2 cut(s) 616, 863
BmrI ACTGGG 1 cut(s) 1450
BmsI GCATC 2 cut(s) 922, 1424
BmuI ACTGGG 1 cut(s) 1450
BoxI GACNNNNGTC 1 cut(s) 1397
BpiI GAAGAC 1 cut(s) 605
BplI GAGNNNNNCTC 2 cut(s) 840, 872
BpmI CTGGAG 3 cut(s) 867, 884, 1023
BpuEI CTTGAG 1 cut(s) 698
BsaJI CCNNGG 3 cut(s) 247, 525, 615
BsaWI WCCGGW 1 cut(s) 899
BsaXI ACNNNNNCTCC 8 cut(s) 857, 887, 996, 1026, 1172, 1176, 1202, 1206
Bsc4I CCNNNNNNNGG 3 cut(s) 319, 1132, 1198
Bse118I RCCGGY 2 cut(s) 239, 466
Bse1I ACTGG 3 cut(s) 6, 1006, 1445
Bse3DI GCAATG 1 cut(s) 276
BseBI CCWGG 2 cut(s) 616, 863
BseDI CCNNGG 3 cut(s) 247, 525, 615
BseGI GGATG 2 cut(s) 937, 1343
BseLI CCNNNNNNNGG 3 cut(s) 319, 1132, 1198
BseMI GCAATG 1 cut(s) 276
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 3 cut(s) 6, 1006, 1445
BseRI GAGGAG 1 cut(s) 1184
BseXI GCAGC 5 cut(s) 412, 558, 826, 982, 1058
BseYI CCCAGC 2 cut(s) 963, 1031
Bsh1236I CGCG 1 cut(s) 557
Bsh1285I CGRYCG 1 cut(s) 495
BshFI GGCC 8 cut(s) 203, 243, 312, 486, 503, 530, 1095, 1418
BshNI GGYRCC 1 cut(s) 1315
BsiEI CGRYCG 1 cut(s) 495
BsiHKAI GWGCWC 3 cut(s) 108, 264, 510
BsiSI CCGG 4 cut(s) 182, 240, 467, 900
BslFI GGGAC 1 cut(s) 1405
BslI CCNNNNNNNGG 3 cut(s) 319, 1132, 1198
BsmAI GTCTC 1 cut(s) 627
BsmFI GGGAC 1 cut(s) 1405
BsnI GGCC 8 cut(s) 203, 243, 312, 486, 503, 530, 1095, 1418
Bsp1286I GDGCHC 3 cut(s) 108, 264, 510
Bsp1407I TGTACA 1 cut(s) 393
Bsp143I GATC 2 cut(s) 222, 1256
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 7 cut(s) 53, 267, 446, 539, 569, 629, 699
BspANI GGCC 8 cut(s) 203, 243, 312, 486, 503, 530, 1095, 1418
BspCNI CTCAG 1 cut(s) 74
BspFNI CGCG 1 cut(s) 557
BspLI GGNNCC 3 cut(s) 42, 697, 1317
BspMAI CTGCAG 1 cut(s) 576
BspPI GGATC 1 cut(s) 1264
BspT107I GGYRCC 1 cut(s) 1315
BsrBI CCGCTC 1 cut(s) 448
BsrDI GCAATG 1 cut(s) 276
BsrFI RCCGGY 2 cut(s) 239, 466
BsrGI TGTACA 1 cut(s) 393
BsrI ACTGG 3 cut(s) 6, 1006, 1445
BssAI RCCGGY 2 cut(s) 239, 466
BssECI CCNNGG 3 cut(s) 247, 525, 615
BssMI GATC 2 cut(s) 222, 1256
BssT1I CCWWGG 1 cut(s) 525
Bst2UI CCWGG 2 cut(s) 616, 863
Bst4CI ACNGT 3 cut(s) 348, 1157, 1223
Bst6I CTCTTC 4 cut(s) 30, 425, 461, 1103
BstAPI GCANNNNNTGC 1 cut(s) 923
BstAUI TGTACA 1 cut(s) 393
BstC8I GCNNGC 7 cut(s) 51, 241, 264, 357, 593, 1465, 1469
BstDEI CTNAG 2 cut(s) 61, 256
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 2 cut(s) 937, 1343
BstFNI CGCG 1 cut(s) 557
BstH2I RGCGCY 1 cut(s) 406
BstHHI GCGC 1 cut(s) 405
BstKTI GATC 2 cut(s) 225, 1259
BstMAI GTCTC 1 cut(s) 627
BstMBI GATC 2 cut(s) 222, 1256
BstMCI CGRYCG 1 cut(s) 495
BstMWI GCNNNNNNNGC 8 cut(s) 249, 365, 592, 923, 932, 992, 1055, 1460
BstNI CCWGG 2 cut(s) 616, 863
BstNSI RCATGY 3 cut(s) 400, 1471, 1475
BstPAI GACNNNNGTC 1 cut(s) 1397
BstSCI CCNGG 2 cut(s) 614, 861
BstSFI CTRYAG 2 cut(s) 572, 670
BstUI CGCG 1 cut(s) 557
BstV1I GCAGC 5 cut(s) 412, 558, 826, 982, 1058
BstV2I GAAGAC 1 cut(s) 605
BstX2I RGATCY 1 cut(s) 1256
BstYI RGATCY 1 cut(s) 1256
BsuRI GGCC 8 cut(s) 203, 243, 312, 486, 503, 530, 1095, 1418
BtgI CCRYGG 1 cut(s) 525
BtrI CACGTC 1 cut(s) 499
BtsCI GGATG 2 cut(s) 937, 1343
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 3 cut(s) 18, 344, 1228
Cac8I GCNNGC 7 cut(s) 51, 241, 264, 357, 593, 1465, 1469
CfoI GCGC 1 cut(s) 405
Cfr10I RCCGGY 2 cut(s) 239, 466
Cfr13I GGNCC 2 cut(s) 179, 469
CpoI CGGWCCG 1 cut(s) 179
Csp6I GTAC 4 cut(s) 58, 376, 394, 1475
CspI CGGWCCG 1 cut(s) 179
CviAII CATG 9 cut(s) 214, 397, 408, 526, 532, 949, 1333, 1468, 1472
CviQI GTAC 4 cut(s) 58, 376, 394, 1475
DdeI CTNAG 2 cut(s) 61, 256
DpnI GATC 2 cut(s) 224, 1258
DpnII GATC 2 cut(s) 222, 1256
DraI TTTAAA 1 cut(s) 81
DraIII CACNNNGTG 1 cut(s) 350
EaeI YGGCCR 4 cut(s) 241, 501, 528, 1416
Eam1104I CTCTTC 4 cut(s) 30, 425, 461, 1103
EarI CTCTTC 4 cut(s) 30, 425, 461, 1103
EciI GGCGGA 1 cut(s) 68
Ecl136II GAGCTC 3 cut(s) 106, 262, 508
Eco130I CCWWGG 1 cut(s) 525
Eco24I GRGCYC 3 cut(s) 108, 264, 510
Eco47I GGWCC 2 cut(s) 179, 469
Eco47III AGCGCT 1 cut(s) 404
Eco53kI GAGCTC 3 cut(s) 106, 262, 508
Eco57I CTGAAG 5 cut(s) 51, 532, 617, 1194, 1499
EcoICRI GAGCTC 3 cut(s) 106, 262, 508
EcoRII CCWGG 2 cut(s) 614, 861
EcoT14I CCWWGG 1 cut(s) 525
EcoT22I ATGCAT 2 cut(s) 950, 1473
EcoT38I GRGCYC 3 cut(s) 108, 264, 510
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 9 cut(s) 217, 400, 411, 529, 535, 952, 1336, 1471, 1475
FaqI GGGAC 1 cut(s) 1405
FatI CATG 9 cut(s) 213, 396, 407, 525, 531, 948, 1332, 1467, 1471
FbaI TGATCA 1 cut(s) 222
Fnu4HI GCNGC 7 cut(s) 267, 401, 572, 630, 840, 996, 1047
FokI GGATG 2 cut(s) 944, 1350
FriOI GRGCYC 3 cut(s) 108, 264, 510
Fsp4HI GCNGC 7 cut(s) 267, 401, 572, 630, 840, 996, 1047
FspBI CTAG 1 cut(s) 1322
GlaI GCGC 1 cut(s) 404
GluI GCNGC 7 cut(s) 267, 401, 572, 630, 840, 996, 1047
GsaI CCCAGC 2 cut(s) 967, 1035
GsuI CTGGAG 3 cut(s) 867, 884, 1023
HaeII RGCGCY 1 cut(s) 406
HaeIII GGCC 8 cut(s) 203, 243, 312, 486, 503, 530, 1095, 1418
HapII CCGG 4 cut(s) 182, 240, 467, 900
HhaI GCGC 1 cut(s) 405
Hin1II CATG 9 cut(s) 217, 400, 411, 529, 535, 952, 1336, 1471, 1475
Hin6I GCGC 1 cut(s) 403
HinP1I GCGC 1 cut(s) 403
HindIII AAGCTT 3 cut(s) 161, 231, 357
HinfI GANTC 4 cut(s) 141, 152, 789, 976
HpaII CCGG 4 cut(s) 182, 240, 467, 900
HphI GGTGA 2 cut(s) 217, 232
Hpy166II GTNNAC 3 cut(s) 394, 1160, 1180
Hpy188I TCNGA 3 cut(s) 70, 636, 695
Hpy188III TCNNGA 3 cut(s) 95, 145, 846
Hpy8I GTNNAC 3 cut(s) 394, 1160, 1180
Hpy99I CGWCG 1 cut(s) 500
HpyAV CCTTC 3 cut(s) 129, 449, 1453
HpyCH4III ACNGT 3 cut(s) 348, 1157, 1223
HpyCH4IV ACGT 3 cut(s) 72, 127, 498
HpyF10VI GCNNNNNNNGC 8 cut(s) 249, 365, 592, 923, 932, 992, 1055, 1460
HpyF3I CTNAG 2 cut(s) 61, 256
HpySE526I ACGT 3 cut(s) 72, 127, 498
Hsp92II CATG 9 cut(s) 217, 400, 411, 529, 535, 952, 1336, 1471, 1475
HspAI GCGC 1 cut(s) 403
KroI GCCGGC 1 cut(s) 239
KroNI GCCGGC 1 cut(s) 241
Ksp22I TGATCA 1 cut(s) 222
Kzo9I GATC 2 cut(s) 222, 1256
LmnI GCTCC 2 cut(s) 46, 1028
Lsp1109I GCAGC 5 cut(s) 412, 558, 826, 982, 1058
LweI GCATC 2 cut(s) 922, 1424
MaeI CTAG 1 cut(s) 1322
MaeII ACGT 3 cut(s) 72, 127, 498
MalI GATC 2 cut(s) 224, 1258
MbiI CCGCTC 1 cut(s) 448
MboI GATC 2 cut(s) 222, 1256
MflI RGATCY 1 cut(s) 1256
MhlI GDGCHC 3 cut(s) 108, 264, 510
MlsI TGGCCA 2 cut(s) 530, 1418
MluCI AATT 5 cut(s) 712, 868, 1089, 1209, 1365
MluNI TGGCCA 2 cut(s) 530, 1418
MlyI GAGTC 1 cut(s) 150
MmeI TCCRAC 2 cut(s) 673, 1252
Mox20I TGGCCA 2 cut(s) 530, 1418
Mph1103I ATGCAT 2 cut(s) 950, 1473
MroNI GCCGGC 1 cut(s) 239
MscI TGGCCA 2 cut(s) 530, 1418
MseI TTAA 3 cut(s) 26, 80, 957
MslI CAYNNNNRTG 3 cut(s) 218, 530, 1313
Msp20I TGGCCA 2 cut(s) 530, 1418
MspA1I CMGCKG 2 cut(s) 571, 595
MspI CCGG 4 cut(s) 182, 240, 467, 900
MspR9I CCNGG 2 cut(s) 616, 863
MvaI CCWGG 2 cut(s) 616, 863
MvnI CGCG 1 cut(s) 557
MwoI GCNNNNNNNGC 8 cut(s) 249, 365, 592, 923, 932, 992, 1055, 1460
NaeI GCCGGC 1 cut(s) 241
NcoI CCATGG 1 cut(s) 525
NdeII GATC 2 cut(s) 222, 1256
NgoMIV GCCGGC 1 cut(s) 239
NlaIII CATG 9 cut(s) 217, 400, 411, 529, 535, 952, 1336, 1471, 1475
NlaIV GGNNCC 3 cut(s) 42, 697, 1317
NmeAIII GCCGAG 2 cut(s) 228, 529
NsiI ATGCAT 2 cut(s) 950, 1473
NspI RCATGY 3 cut(s) 400, 1471, 1475
PaeI GCATGC 1 cut(s) 1471
PcsI WCGNNNNNNNCGW 2 cut(s) 93, 300
PdiI GCCGGC 1 cut(s) 241
PfeI GAWTC 3 cut(s) 152, 789, 976
PkrI GCNGC 7 cut(s) 268, 402, 573, 631, 841, 997, 1048
PleI GAGTC 1 cut(s) 149
PpsI GAGTC 1 cut(s) 149
PshAI GACNNNNGTC 1 cut(s) 1397
PshBI ATTAAT 1 cut(s) 26
PsiI TTATAA 1 cut(s) 1088
Psp124BI GAGCTC 3 cut(s) 108, 264, 510
Psp6I CCWGG 2 cut(s) 614, 861
PspFI CCCAGC 2 cut(s) 963, 1031
PspGI CCWGG 2 cut(s) 614, 861
PspN4I GGNNCC 3 cut(s) 42, 697, 1317
PspPI GGNCC 2 cut(s) 179, 469
PsrI GAACNNNNNNTAC 2 cut(s) 688, 720
PstI CTGCAG 1 cut(s) 576
PsuI RGATCY 1 cut(s) 1256
PvuII CAGCTG 1 cut(s) 595
RsaI GTAC 4 cut(s) 59, 377, 395, 1476
RsaNI GTAC 4 cut(s) 58, 376, 394, 1475
RseI CAYNNNNRTG 3 cut(s) 218, 530, 1313
Rsr2I CGGWCCG 1 cut(s) 179
RsrII CGGWCCG 1 cut(s) 179
SacI GAGCTC 3 cut(s) 108, 264, 510
SaqAI TTAA 3 cut(s) 26, 80, 957
SatI GCNGC 7 cut(s) 267, 401, 572, 630, 840, 996, 1047
Sau3AI GATC 2 cut(s) 222, 1256
Sau96I GGNCC 2 cut(s) 179, 469
ScaI AGTACT 2 cut(s) 59, 377
SchI GAGTC 1 cut(s) 150
ScrFI CCNGG 2 cut(s) 616, 863
SduI GDGCHC 3 cut(s) 108, 264, 510
SfaNI GCATC 2 cut(s) 922, 1424
SfcI CTRYAG 2 cut(s) 572, 670
SinI GGWCC 2 cut(s) 179, 469
SmiMI CAYNNNNRTG 3 cut(s) 218, 530, 1313
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
SphI GCATGC 1 cut(s) 1471
Sse9I AATT 5 cut(s) 712, 868, 1089, 1209, 1365
SsiI CCGC 7 cut(s) 53, 267, 446, 539, 569, 629, 699
SspMI CTAG 1 cut(s) 1322
SstI GAGCTC 3 cut(s) 108, 264, 510
StyD4I CCNGG 2 cut(s) 614, 861
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 348, 1157, 1223
TaiI ACGT 3 cut(s) 75, 130, 501
TaqI TCGA 2 cut(s) 303, 798
TaqII GACCGA 2 cut(s) 167, 509
TasI AATT 5 cut(s) 712, 868, 1089, 1209, 1365
TatI WGTACW 4 cut(s) 57, 375, 393, 1474
TauI GCSGC 2 cut(s) 269, 632
TfiI GAWTC 3 cut(s) 152, 789, 976
Tru1I TTAA 3 cut(s) 26, 80, 957
Tru9I TTAA 3 cut(s) 26, 80, 957
TscAI CASTG 3 cut(s) 25, 351, 1228
TseI GCWGC 5 cut(s) 400, 571, 839, 995, 1046
TspDTI ATGAA 4 cut(s) 129, 632, 814, 1297
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 3 cut(s) 25, 351, 1228
VpaK11BI GGWCC 2 cut(s) 179, 469
VspI ATTAAT 1 cut(s) 26
XapI RAATTY 2 cut(s) 712, 1365
XceI RCATGY 3 cut(s) 400, 1471, 1475
XspI CTAG 1 cut(s) 1322
ZrmI AGTACT 2 cut(s) 59, 377
Zsp2I ATGCAT 2 cut(s) 950, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.