MD08G1190900.v1.1

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
24176868 .. 24181037
4170 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1190900.v1.1.491

Sequence Viewer

Length: 1719 bp
ATGATGGGAATCGTTGACAGAGAAGAAGTTCATCTTCACCAATCTCTATTAGCAGAATCATCAAGCAAAAACACTACTACCACTGATGATGATCAACAAAATACACACCTTTGGTCAAGAGTTTGGATAGAATCCAAGAAACTATGGCGCGTGGTCGGTCCGGCCATCATCGGCCGTTTGTCTGCCTTCTCCATGATCGTCATAACACAAGCCTTTGCCGGACACCTTGGTGTGGTTGAACTCGCTTCCATTTCCATTGCCAACAATGTCATTGTCGGCTTCACTTTTGGTCTCCTGAGTGCTGTTTGTTTAAAATGTGATTTCGGTGAAGGGGGATTGATTTTAACGATTAATGTGGACTTGCATTTTATTCGTTGCAGAACTTTTAATCCACACCAGATCTTGAACCGGGGAGGGGTGGGGTGGGGAGGGGAGGGCAGGCTGTCGCAGACTCGCCGAACCGCCTGTGGGGTGGGCAGGGATGGGGGACTTGGGTTTCACGGTTTAGGCATGGCAAGCGCACTAGAGACACTATGTGGGCAGGCTTTTGGGGCCAAGAGGCACCATATGTTGGGGATATACCTCCAAAGGTCATGGATTGTGTTGTTCCTATGTTGCATTCTGCTCTTGCCTATATACATTTTCGCCTCTCCGATTCTGAAACTATTAGGACAGTCCGATGACGTTGCAGAGATGTCGGGAGTGGTGTCTTTGTGGCTTTTACCCATGCACTTCAGCTATGCGTTTCTTTTCCCATTGCAGAGGTTCTTGCAGAGCCAGCTGAAGAACTTTGTGACTTTGTGGGTTGCCTTGGTGGTTTTGGTGTTTCATGCCTTGATAAGTTGGCTTTTTGTGTATGTTTTAGACTTTGGGGTTGTGGGTGCTGCTATTGCTTTGGATATCTCTTGGTGGGTTTCCTTTTTCGTGCTACTTGGATATGTAACATGTGGTTGGTGTCCACTCAGTTGGACTGGTTTCTCTATGGAAGCCTTTTCTGGCCTTTGGGAATTTGTCAAACTATCTACTGCTTCTGGGGTCATGCTTTGCTTGGAATTTTGGTACTACAGAATCTTGATATTGATGACTGGACACTTACAGAACGCGACTCTTTCTGTGGACGCCTTATCAGTTTGCATGACTATGAATGCTTGGGAGCTCATGATTCATTTAGCCTTCTTCGCTGGAACTGGAGTAAGAGTATCGAATGAGCTGGGTGCTGGAAATGGTCAGGCAGCAAAATTTGCAGCAAAAGTATCTGTGGCAGAATCCAGCTTGATTGCCCTATTCTTCTGCATACTTATTATTGCATTCCGTGATAATTTTGGATACATATTCACAACAAGCAGTGATGTCATCCAACGAGTTAATCAAATGTCTTACATCCTGGGTATCACAATTCTACTTAACGGTGTTCAACCCGTCTTGTCAGGAGTAGCTGTAGGCTCAGGATGGCAGGCATGGGTGGCATACATAAATCTTTTCTGCTACTACATTATTGGGCTCCCTCTAGGATTTGTAATGGGATGGGTCGCTGACTTGGGTGTTACGGGCATATGGGGTGGGATGATCCTTGGCGGAACTGCTGTCCAAACAGTGATTTTGGGCATCGTGACATCGCGACGTGATTGGGAAAAGGAGGCTCAGAAGGCCAGCCAGCGTGTAAATAAGTGGTCAACTCCTAATCCAGATGATCAGACAGAGGAGCAACAATATACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

573

Amino Acids

63.03

Weight (kDa)

6.49

Isoelectric Point (pI)

32.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 165 - 283 4.6e-22 MatE
MatE PF01554 345 - 506 9.7e-27 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 561
AccB7I CCANNNNNTGG 1 cut(s) 571
AccII CGCG 3 cut(s) 150, 1103, 1618
AciI CCGC 2 cut(s) 462, 1575
AclWI GGATC 1 cut(s) 1561
AcoI YGGCCR 2 cut(s) 162, 172
AcsI RAATTY 3 cut(s) 1007, 1052, 1238
AcuI CTGAAG 2 cut(s) 718, 803
AcyI GRCGYC 1 cut(s) 1119
AdeI CACNNNGTG 1 cut(s) 536
AfaI GTAC 1 cut(s) 1061
AfiI CCNNNNNNNGG 4 cut(s) 232, 415, 468, 571
AflIII ACRYGT 1 cut(s) 944
AgsI TTSAA 3 cut(s) 239, 406, 1415
AjiI CACGTC 1 cut(s) 1622
AjnI CCWGG 1 cut(s) 1383
AleI CACNNNNGTG 1 cut(s) 228
AloI GAACNNNNNNTCC 2 cut(s) 373, 405
AluBI AGCT 6 cut(s) 738, 781, 1156, 1210, 1272, 1436
AluI AGCT 6 cut(s) 738, 781, 1156, 1210, 1272, 1436
Alw21I GWGCWC 1 cut(s) 1158
Alw26I GTCTC 2 cut(s) 296, 521
AlwI GGATC 1 cut(s) 1561
AoxI GGCC 5 cut(s) 162, 172, 552, 997, 1647
ApeKI GCWGC 3 cut(s) 884, 1232, 1244
ApoI RAATTY 3 cut(s) 1007, 1052, 1238
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 1 cut(s) 27
AspLEI GCGC 2 cut(s) 150, 521
AspS9I GGNCC 2 cut(s) 158, 552
AsuC2I CCSGG 1 cut(s) 410
AsuHPI GGTGA 2 cut(s) 29, 338
AvaII GGWCC 1 cut(s) 158
BanI GGYRCC 1 cut(s) 561
BanII GRGCYC 2 cut(s) 1158, 1503
Bbv12I GWGCWC 1 cut(s) 1158
BbvI GCAGC 3 cut(s) 871, 1244, 1256
BccI CCATC 4 cut(s) 173, 476, 1443, 1518
BceAI ACGGC 1 cut(s) 159
BcgI CGANNNNNNTGC 6 cut(s) 353, 387, 668, 678, 702, 712
BciT130I CCWGG 1 cut(s) 1385
BciVI GTATCC 1 cut(s) 1319
BclI TGATCA 2 cut(s) 91, 1690
BcnI CCSGG 1 cut(s) 410
BcoDI GTCTC 2 cut(s) 296, 521
BfaI CTAG 2 cut(s) 524, 1508
BfmI CTRYAG 2 cut(s) 1063, 1437
BfuI GTATCC 1 cut(s) 1319
BglII AGATCT 1 cut(s) 399
BisI GCNGC 3 cut(s) 885, 1233, 1245
BlsI GCNGC 3 cut(s) 886, 1234, 1246
Bme1390I CCNGG 2 cut(s) 410, 1385
Bme18I GGWCC 1 cut(s) 158
BmgBI CACGTC 1 cut(s) 1622
BmgT120I GGNCC 2 cut(s) 158, 552
BmiI GGNNCC 3 cut(s) 553, 563, 1502
BmrFI CCNGG 2 cut(s) 410, 1385
BmsI GCATC 1 cut(s) 1614
BpmI CTGGAG 1 cut(s) 1209
Bpu10I CCTNAGC 1 cut(s) 1444
BpuMI CCSGG 1 cut(s) 410
BsaBI GATNNNNATC 2 cut(s) 8, 90
BsaHI GRCGYC 1 cut(s) 1119
BsaI GGTCTC 1 cut(s) 296
BsaJI CCNNGG 5 cut(s) 226, 409, 810, 1384, 1570
BsaXI ACNNNNNCTCC 4 cut(s) 1182, 1212, 1422, 1452
Bsc4I CCNNNNNNNGG 4 cut(s) 232, 415, 468, 571
Bse1I ACTGG 3 cut(s) 976, 1090, 1192
Bse3DI GCAATG 2 cut(s) 255, 755
Bse8I GATNNNNATC 2 cut(s) 8, 90
BseBI CCWGG 1 cut(s) 1385
BseDI CCNNGG 5 cut(s) 226, 409, 810, 1384, 1570
BseGI GGATG 6 cut(s) 487, 1353, 1380, 1454, 1529, 1569
BseJI GATNNNNATC 2 cut(s) 8, 90
BseLI CCNNNNNNNGG 4 cut(s) 232, 415, 468, 571
BseMI GCAATG 2 cut(s) 255, 755
BseMII CTCAG 4 cut(s) 287, 976, 1458, 1655
BseNI ACTGG 3 cut(s) 976, 1090, 1192
BseRI GAGGAG 1 cut(s) 1715
BseX3I CGGCCG 1 cut(s) 172
BseXI GCAGC 3 cut(s) 871, 1244, 1256
BseYI CCCAGC 1 cut(s) 1210
Bsh1236I CGCG 3 cut(s) 150, 1103, 1618
Bsh1285I CGRYCG 1 cut(s) 175
BshFI GGCC 5 cut(s) 164, 174, 554, 999, 1649
BshNI GGYRCC 1 cut(s) 561
BsiEI CGRYCG 1 cut(s) 175
BsiHKAI GWGCWC 1 cut(s) 1158
BsiSI CCGG 3 cut(s) 161, 219, 409
BslFI GGGAC 1 cut(s) 501
BslI CCNNNNNNNGG 4 cut(s) 232, 415, 468, 571
BsmAI GTCTC 2 cut(s) 296, 521
BsmFI GGGAC 1 cut(s) 501
BsmI GAATGC 3 cut(s) 618, 1150, 1307
BsnI GGCC 5 cut(s) 164, 174, 554, 999, 1649
Bso31I GGTCTC 1 cut(s) 296
Bsp1286I GDGCHC 2 cut(s) 1158, 1503
Bsp143I GATC 5 cut(s) 91, 195, 399, 1566, 1690
Bsp68I TCGCGA 1 cut(s) 1618
BspACI CCGC 2 cut(s) 462, 1575
BspANI GGCC 5 cut(s) 164, 174, 554, 999, 1649
BspCNI CTCAG 4 cut(s) 288, 975, 1457, 1654
BspFNI CGCG 3 cut(s) 150, 1103, 1618
BspHI TCATGA 1 cut(s) 1158
BspLI GGNNCC 3 cut(s) 553, 563, 1502
BspPI GGATC 1 cut(s) 1561
BspT107I GGYRCC 1 cut(s) 561
BspTNI GGTCTC 1 cut(s) 296
BsrDI GCAATG 2 cut(s) 255, 755
BsrI ACTGG 3 cut(s) 976, 1090, 1192
BssECI CCNNGG 5 cut(s) 226, 409, 810, 1384, 1570
BssMI GATC 5 cut(s) 91, 195, 399, 1566, 1690
BssNI GRCGYC 1 cut(s) 1119
BssT1I CCWWGG 3 cut(s) 226, 810, 1570
Bst2UI CCWGG 1 cut(s) 1385
Bst4CI ACNGT 4 cut(s) 503, 675, 1409, 1594
BstACI GRCGYC 1 cut(s) 1119
BstAPI GCANNNNNTGC 1 cut(s) 1241
BstC8I GCNNGC 7 cut(s) 440, 517, 543, 779, 1455, 1651, 1655
BstDEI CTNAG 4 cut(s) 296, 962, 1444, 1641
BstF5I GGATG 6 cut(s) 487, 1353, 1380, 1454, 1529, 1569
BstFNI CGCG 3 cut(s) 150, 1103, 1618
BstHHI GCGC 2 cut(s) 150, 521
BstKTI GATC 5 cut(s) 94, 198, 402, 1569, 1693
BstMAI GTCTC 2 cut(s) 296, 521
BstMBI GATC 5 cut(s) 91, 195, 399, 1566, 1690
BstMCI CGRYCG 1 cut(s) 175
BstMWI GCNNNNNNNGC 8 cut(s) 516, 551, 778, 890, 1178, 1241, 1463, 1646
BstNI CCWGG 1 cut(s) 1385
BstNSI RCATGY 1 cut(s) 948
BstSCI CCNGG 2 cut(s) 408, 1383
BstSFI CTRYAG 2 cut(s) 1063, 1437
BstUI CGCG 3 cut(s) 150, 1103, 1618
BstV1I GCAGC 3 cut(s) 871, 1244, 1256
BstX2I RGATCY 1 cut(s) 399
BstXI CCANNNNNNTGG 1 cut(s) 966
BstYI RGATCY 1 cut(s) 399
BstZI CGGCCG 1 cut(s) 172
BsuI GTATCC 1 cut(s) 1319
BsuRI GGCC 5 cut(s) 164, 174, 554, 999, 1649
BtgZI GCGATG 1 cut(s) 1599
BtrI CACGTC 1 cut(s) 1622
BtsCI GGATG 6 cut(s) 487, 1353, 1380, 1454, 1529, 1569
BtsI GCAGTG 1 cut(s) 1351
BtsIMutI CAGTG 3 cut(s) 81, 1351, 1599
BtuMI TCGCGA 1 cut(s) 1618
Cac8I GCNNGC 7 cut(s) 440, 517, 543, 779, 1455, 1651, 1655
CciI TCATGA 1 cut(s) 1158
CfoI GCGC 2 cut(s) 150, 521
Cfr13I GGNCC 2 cut(s) 158, 552
CpoI CGGWCCG 1 cut(s) 158
CseI GACGC 1 cut(s) 1127
Csp6I GTAC 1 cut(s) 1060
CspI CGGWCCG 1 cut(s) 158
CviQI GTAC 1 cut(s) 1060
DdeI CTNAG 4 cut(s) 296, 962, 1444, 1641
DpnI GATC 5 cut(s) 93, 197, 401, 1568, 1692
DpnII GATC 5 cut(s) 91, 195, 399, 1566, 1690
DraI TTTAAA 1 cut(s) 312
DraIII CACNNNGTG 1 cut(s) 536
EaeI YGGCCR 2 cut(s) 162, 172
EagI CGGCCG 1 cut(s) 172
EciI GGCGGA 1 cut(s) 1590
Ecl136II GAGCTC 1 cut(s) 1156
EclXI CGGCCG 1 cut(s) 172
Eco130I CCWWGG 3 cut(s) 226, 810, 1570
Eco24I GRGCYC 2 cut(s) 1158, 1503
Eco31I GGTCTC 1 cut(s) 296
Eco32I GATATC 1 cut(s) 901
Eco47I GGWCC 1 cut(s) 158
Eco52I CGGCCG 1 cut(s) 172
Eco53kI GAGCTC 1 cut(s) 1156
Eco57I CTGAAG 2 cut(s) 718, 803
EcoICRI GAGCTC 1 cut(s) 1156
EcoRII CCWGG 1 cut(s) 1383
EcoRV GATATC 1 cut(s) 901
EcoT14I CCWWGG 3 cut(s) 226, 810, 1570
EcoT38I GRGCYC 2 cut(s) 1158, 1503
ErhI CCWWGG 3 cut(s) 226, 810, 1570
FalI AAGNNNNNCTT 2 cut(s) 18, 50
FaqI GGGAC 1 cut(s) 501
FauNDI CATATG 2 cut(s) 567, 1553
FbaI TGATCA 2 cut(s) 91, 1690
Fnu4HI GCNGC 3 cut(s) 885, 1233, 1245
FokI GGATG 6 cut(s) 494, 1340, 1367, 1461, 1536, 1576
FriOI GRGCYC 2 cut(s) 1158, 1503
Fsp4HI GCNGC 3 cut(s) 885, 1233, 1245
FspBI CTAG 2 cut(s) 524, 1508
GlaI GCGC 2 cut(s) 149, 520
GluI GCNGC 3 cut(s) 885, 1233, 1245
GsaI CCCAGC 1 cut(s) 1214
GsuI CTGGAG 1 cut(s) 1209
HaeIII GGCC 5 cut(s) 164, 174, 554, 999, 1649
HapII CCGG 3 cut(s) 161, 219, 409
HgaI GACGC 1 cut(s) 1127
HhaI GCGC 2 cut(s) 150, 521
Hin1I GRCGYC 1 cut(s) 1119
Hin6I GCGC 2 cut(s) 148, 519
HinP1I GCGC 2 cut(s) 148, 519
HincII GTYRAC 2 cut(s) 16, 1674
HindII GTYRAC 2 cut(s) 16, 1674
HinfI GANTC 9 cut(s) 9, 56, 131, 451, 655, 1068, 1105, 1162, 1265
HpaII CCGG 3 cut(s) 161, 219, 409
HphI GGTGA 2 cut(s) 29, 338
Hpy166II GTNNAC 5 cut(s) 16, 358, 959, 1117, 1674
Hpy188I TCNGA 5 cut(s) 654, 660, 679, 1644, 1695
Hpy8I GTNNAC 5 cut(s) 16, 358, 959, 1117, 1674
Hpy99I CGWCG 1 cut(s) 1623
HpyAV CCTTC 4 cut(s) 196, 323, 1183, 1639
HpyCH4III ACNGT 4 cut(s) 503, 675, 1409, 1594
HpyCH4IV ACGT 2 cut(s) 684, 1621
HpyF10VI GCNNNNNNNGC 8 cut(s) 516, 551, 778, 890, 1178, 1241, 1463, 1646
HpyF3I CTNAG 4 cut(s) 296, 962, 1444, 1641
HpySE526I ACGT 2 cut(s) 684, 1621
Hsp92I GRCGYC 1 cut(s) 1119
HspAI GCGC 2 cut(s) 148, 519
Ksp22I TGATCA 2 cut(s) 91, 1690
Kzo9I GATC 5 cut(s) 91, 195, 399, 1566, 1690
LmnI GCTCC 3 cut(s) 1153, 1506, 1702
Lsp1109I GCAGC 3 cut(s) 871, 1244, 1256
LweI GCATC 1 cut(s) 1614
MaeI CTAG 2 cut(s) 524, 1508
MaeII ACGT 2 cut(s) 684, 1621
MaeIII GTNAC 4 cut(s) 793, 940, 1543, 1609
MalI GATC 5 cut(s) 93, 197, 401, 1568, 1692
MboI GATC 5 cut(s) 91, 195, 399, 1566, 1690
MboII GAAGA 5 cut(s) 26, 35, 796, 1168, 1279
MflI RGATCY 1 cut(s) 399
MhlI GDGCHC 2 cut(s) 1158, 1503
MluCI AATT 5 cut(s) 1007, 1052, 1238, 1318, 1395
MlyI GAGTC 2 cut(s) 445, 1099
MmeI TCCRAC 2 cut(s) 947, 1381
MroXI GAANNNNTTC 1 cut(s) 27
MseI TTAA 6 cut(s) 311, 344, 351, 387, 1365, 1404
MslI CAYNNNNRTG 2 cut(s) 228, 1139
MspA1I CMGCKG 1 cut(s) 781
MspI CCGG 3 cut(s) 161, 219, 409
MspR9I CCNGG 2 cut(s) 410, 1385
Mva1269I GAATGC 3 cut(s) 618, 1150, 1307
MvaI CCWGG 1 cut(s) 1385
MvnI CGCG 3 cut(s) 150, 1103, 1618
MwoI GCNNNNNNNGC 8 cut(s) 516, 551, 778, 890, 1178, 1241, 1463, 1646
NciI CCSGG 1 cut(s) 410
NdeI CATATG 2 cut(s) 567, 1553
NdeII GATC 5 cut(s) 91, 195, 399, 1566, 1690
NlaIV GGNNCC 3 cut(s) 553, 563, 1502
NmuCI GTSAC 2 cut(s) 793, 1609
NruI TCGCGA 1 cut(s) 1618
NspI RCATGY 1 cut(s) 948
OliI CACNNNNGTG 1 cut(s) 228
PagI TCATGA 1 cut(s) 1158
PciI ACATGT 1 cut(s) 944
PctI GAATGC 3 cut(s) 618, 1150, 1307
PdmI GAANNNNTTC 1 cut(s) 27
PfeI GAWTC 7 cut(s) 9, 56, 131, 655, 1068, 1162, 1265
PflMI CCANNNNNTGG 1 cut(s) 571
PkrI GCNGC 3 cut(s) 886, 1234, 1246
PleI GAGTC 2 cut(s) 445, 1099
PpsI GAGTC 2 cut(s) 445, 1099
PscI ACATGT 1 cut(s) 944
PshBI ATTAAT 1 cut(s) 351
Psp124BI GAGCTC 1 cut(s) 1158
Psp6I CCWGG 1 cut(s) 1383
PspFI CCCAGC 1 cut(s) 1210
PspGI CCWGG 1 cut(s) 1383
PspN4I GGNNCC 3 cut(s) 553, 563, 1502
PspPI GGNCC 2 cut(s) 158, 552
PsuI RGATCY 1 cut(s) 399
PvuII CAGCTG 1 cut(s) 781
RruI TCGCGA 1 cut(s) 1618
RsaI GTAC 1 cut(s) 1061
RsaNI GTAC 1 cut(s) 1060
RseI CAYNNNNRTG 2 cut(s) 228, 1139
Rsr2I CGGWCCG 1 cut(s) 158
RsrII CGGWCCG 1 cut(s) 158
SacI GAGCTC 1 cut(s) 1158
SaqAI TTAA 6 cut(s) 311, 344, 351, 387, 1365, 1404
SatI GCNGC 3 cut(s) 885, 1233, 1245
Sau3AI GATC 5 cut(s) 91, 195, 399, 1566, 1690
Sau96I GGNCC 2 cut(s) 158, 552
SchI GAGTC 2 cut(s) 445, 1099
ScrFI CCNGG 2 cut(s) 410, 1385
SduI GDGCHC 2 cut(s) 1158, 1503
SfaNI GCATC 1 cut(s) 1614
SfcI CTRYAG 2 cut(s) 1063, 1437
SinI GGWCC 1 cut(s) 158
SmiMI CAYNNNNRTG 2 cut(s) 228, 1139
Sse9I AATT 5 cut(s) 1007, 1052, 1238, 1318, 1395
SsiI CCGC 2 cut(s) 462, 1575
SspMI CTAG 2 cut(s) 524, 1508
SstI GAGCTC 1 cut(s) 1158
StyD4I CCNGG 2 cut(s) 408, 1383
StyI CCWWGG 3 cut(s) 226, 810, 1570
TaaI ACNGT 4 cut(s) 503, 675, 1409, 1594
TaiI ACGT 2 cut(s) 687, 1624
TaqI TCGA 1 cut(s) 1202
TaqII GACCGA 1 cut(s) 146
TasI AATT 5 cut(s) 1007, 1052, 1238, 1318, 1395
TfiI GAWTC 7 cut(s) 9, 56, 131, 655, 1068, 1162, 1265
Tru1I TTAA 6 cut(s) 311, 344, 351, 387, 1365, 1404
Tru9I TTAA 6 cut(s) 311, 344, 351, 387, 1365, 1404
TscAI CASTG 3 cut(s) 88, 1351, 1599
TseFI GTSAC 2 cut(s) 793, 1609
TseI GCWGC 3 cut(s) 884, 1232, 1244
Tsp45I GTSAC 2 cut(s) 793, 1609
TspDTI ATGAA 4 cut(s) 20, 818, 1154, 1157
TspGWI ACGGA 1 cut(s) 1301
TspRI CASTG 3 cut(s) 88, 1351, 1599
Van91I CCANNNNNTGG 1 cut(s) 571
VpaK11BI GGWCC 1 cut(s) 158
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 3 cut(s) 1007, 1052, 1238
XceI RCATGY 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 27
XspI CTAG 2 cut(s) 524, 1508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.