Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1088 |
| Acc65I | GGTACC | 1 cut(s) | 348 |
| AccB1I | GGYRCC | 2 cut(s) | 348, 741 |
| AciI | CCGC | 1 cut(s) | 735 |
| AcoI | YGGCCR | 3 cut(s) | 214, 1173, 1389 |
| AcsI | RAATTY | 3 cut(s) | 794, 855, 1025 |
| AcuI | CTGAAG | 3 cut(s) | 148, 467, 505 |
| AfaI | GTAC | 2 cut(s) | 350, 1083 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 74, 226, 324, 783 |
| AflII | CTTAAG | 1 cut(s) | 569 |
| AgsI | TTSAA | 6 cut(s) | 108, 277, 883, 1202, 1321, 1376 |
| AjiI | CACGTC | 2 cut(s) | 472, 1409 |
| AjnI | CCWGG | 1 cut(s) | 692 |
| AleI | CACNNNNGTG | 1 cut(s) | 222 |
| Alw21I | GWGCWC | 1 cut(s) | 945 |
| Alw26I | GTCTC | 1 cut(s) | 119 |
| Ama87I | CYCGRG | 1 cut(s) | 1231 |
| AoxI | GGCC | 4 cut(s) | 214, 330, 1173, 1389 |
| ApeKI | GCWGC | 6 cut(s) | 9, 402, 451, 671, 728, 812 |
| ApoI | RAATTY | 3 cut(s) | 794, 855, 1025 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 136, 168 |
| AseI | ATTAAT | 1 cut(s) | 930 |
| Asp718I | GGTACC | 1 cut(s) | 348 |
| AspLEI | GCGC | 1 cut(s) | 308 |
| AspS9I | GGNCC | 2 cut(s) | 152, 229 |
| AsuHPI | GGTGA | 2 cut(s) | 89, 236 |
| AvaI | CYCGRG | 1 cut(s) | 1231 |
| AvaII | GGWCC | 2 cut(s) | 152, 229 |
| BaeGI | GKGCMC | 1 cut(s) | 746 |
| BalI | TGGCCA | 2 cut(s) | 216, 1391 |
| BanI | GGYRCC | 2 cut(s) | 348, 741 |
| BanII | GRGCYC | 5 cut(s) | 717, 789, 945, 1232, 1290 |
| BbsI | GAAGAC | 1 cut(s) | 1309 |
| Bbv12I | GWGCWC | 1 cut(s) | 945 |
| BbvI | GCAGC | 6 cut(s) | 21, 389, 438, 658, 715, 799 |
| BccI | CCATC | 6 cut(s) | 167, 930, 1153, 1230, 1305, 1400 |
| BceAI | ACGGC | 1 cut(s) | 1160 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 465, 499 |
| BciT130I | CCWGG | 1 cut(s) | 694 |
| BclI | TGATCA | 1 cut(s) | 79 |
| BcoDI | GTCTC | 1 cut(s) | 119 |
| BfaI | CTAG | 2 cut(s) | 956, 998 |
| BfmI | CTRYAG | 1 cut(s) | 16 |
| BfrI | CTTAAG | 1 cut(s) | 569 |
| BisI | GCNGC | 6 cut(s) | 10, 403, 452, 672, 729, 813 |
| BlsI | GCNGC | 6 cut(s) | 11, 404, 453, 673, 730, 814 |
| Bme1390I | CCNGG | 1 cut(s) | 694 |
| Bme18I | GGWCC | 2 cut(s) | 152, 229 |
| BmeT110I | CYCGRG | 1 cut(s) | 1231 |
| BmgBI | CACGTC | 2 cut(s) | 472, 1409 |
| BmgT120I | GGNCC | 2 cut(s) | 152, 229 |
| BmiI | GGNNCC | 6 cut(s) | 153, 340, 350, 506, 743, 1289 |
| BmrFI | CCNGG | 1 cut(s) | 694 |
| BmsI | GCATC | 1 cut(s) | 895 |
| BpiI | GAAGAC | 1 cut(s) | 1309 |
| BpuEI | CTTGAG | 1 cut(s) | 1345 |
| BsaAI | YACGTR | 1 cut(s) | 427 |
| BsaI | GGTCTC | 1 cut(s) | 119 |
| BsaJI | CCNNGG | 1 cut(s) | 220 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 830, 860, 1209, 1239 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 74, 226, 324, 783 |
| Bse1I | ACTGG | 5 cut(s) | 763, 877, 1016, 1128, 1372 |
| Bse3DI | GCAATG | 4 cut(s) | 62, 249, 542, 675 |
| BseBI | CCWGG | 1 cut(s) | 694 |
| BseDI | CCNNGG | 1 cut(s) | 220 |
| BseGI | GGATG | 5 cut(s) | 910, 941, 1241, 1316, 1356 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 74, 226, 324, 783 |
| BseMI | GCAATG | 4 cut(s) | 62, 249, 542, 675 |
| BseMII | CTCAG | 2 cut(s) | 761, 1419 |
| BseNI | ACTGG | 5 cut(s) | 763, 877, 1016, 1128, 1372 |
| BseSI | GKGCMC | 1 cut(s) | 746 |
| BseXI | GCAGC | 6 cut(s) | 21, 389, 438, 658, 715, 799 |
| BseYI | CCCAGC | 1 cut(s) | 454 |
| BsgI | GTGCAG | 1 cut(s) | 500 |
| BshFI | GGCC | 4 cut(s) | 216, 332, 1175, 1391 |
| BshNI | GGYRCC | 2 cut(s) | 348, 741 |
| BsiHKAI | GWGCWC | 1 cut(s) | 945 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1231 |
| BslFI | GGGAC | 2 cut(s) | 35, 1378 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 74, 226, 324, 783 |
| BsmAI | GTCTC | 1 cut(s) | 119 |
| BsmFI | GGGAC | 2 cut(s) | 35, 1378 |
| BsnI | GGCC | 4 cut(s) | 216, 332, 1175, 1391 |
| Bso31I | GGTCTC | 1 cut(s) | 119 |
| BsoBI | CYCGRG | 1 cut(s) | 1231 |
| Bsp1286I | GDGCHC | 6 cut(s) | 717, 746, 789, 945, 1232, 1290 |
| Bsp143I | GATC | 2 cut(s) | 79, 1353 |
| BspACI | CCGC | 1 cut(s) | 735 |
| BspANI | GGCC | 4 cut(s) | 216, 332, 1175, 1391 |
| BspCNI | CTCAG | 2 cut(s) | 760, 1420 |
| BspHI | TCATGA | 2 cut(s) | 82, 945 |
| BspLI | GGNNCC | 6 cut(s) | 153, 340, 350, 506, 743, 1289 |
| BspT107I | GGYRCC | 2 cut(s) | 348, 741 |
| BspTI | CTTAAG | 1 cut(s) | 569 |
| BspTNI | GGTCTC | 1 cut(s) | 119 |
| BsrDI | GCAATG | 4 cut(s) | 62, 249, 542, 675 |
| BsrI | ACTGG | 5 cut(s) | 763, 877, 1016, 1128, 1372 |
| BssECI | CCNNGG | 1 cut(s) | 220 |
| BssMI | GATC | 2 cut(s) | 79, 1353 |
| Bst2UI | CCWGG | 1 cut(s) | 694 |
| Bst4CI | ACNGT | 2 cut(s) | 262, 1060 |
| BstAFI | CTTAAG | 1 cut(s) | 569 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 896, 1028 |
| BstBAI | YACGTR | 1 cut(s) | 427 |
| BstDEI | CTNAG | 2 cut(s) | 747, 1428 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 224 |
| BstF5I | GGATG | 5 cut(s) | 910, 941, 1241, 1316, 1356 |
| BstHHI | GCGC | 1 cut(s) | 308 |
| BstKTI | GATC | 2 cut(s) | 82, 1356 |
| BstMAI | GTCTC | 1 cut(s) | 119 |
| BstMBI | GATC | 2 cut(s) | 79, 1353 |
| BstNI | CCWGG | 1 cut(s) | 694 |
| BstSCI | CCNGG | 1 cut(s) | 692 |
| BstSFI | CTRYAG | 1 cut(s) | 16 |
| BstSLI | GKGCMC | 1 cut(s) | 746 |
| BstSNI | TACGTA | 1 cut(s) | 427 |
| BstV1I | GCAGC | 6 cut(s) | 21, 389, 438, 658, 715, 799 |
| BstV2I | GAAGAC | 1 cut(s) | 1309 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 359, 682 |
| BsuRI | GGCC | 4 cut(s) | 216, 332, 1175, 1391 |
| BtrI | CACGTC | 2 cut(s) | 472, 1409 |
| BtsCI | GGATG | 5 cut(s) | 910, 941, 1241, 1316, 1356 |
| BtsI | GCAGTG | 2 cut(s) | 566, 1460 |
| BtsIMutI | CAGTG | 3 cut(s) | 258, 566, 1460 |
| CciI | TCATGA | 2 cut(s) | 82, 945 |
| CfoI | GCGC | 1 cut(s) | 308 |
| Cfr13I | GGNCC | 2 cut(s) | 152, 229 |
| Csp6I | GTAC | 2 cut(s) | 349, 1082 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1045, 1080 |
| CviAII | CATG | 5 cut(s) | 83, 187, 381, 922, 946 |
| CviQI | GTAC | 2 cut(s) | 349, 1082 |
| DdeI | CTNAG | 2 cut(s) | 747, 1428 |
| DpnI | GATC | 2 cut(s) | 81, 1355 |
| DpnII | GATC | 2 cut(s) | 79, 1353 |
| EaeI | YGGCCR | 3 cut(s) | 214, 1173, 1389 |
| Ecl136II | GAGCTC | 1 cut(s) | 943 |
| Eco105I | TACGTA | 1 cut(s) | 427 |
| Eco147I | AGGCCT | 1 cut(s) | 332 |
| Eco24I | GRGCYC | 5 cut(s) | 717, 789, 945, 1232, 1290 |
| Eco31I | GGTCTC | 1 cut(s) | 119 |
| Eco47I | GGWCC | 2 cut(s) | 152, 229 |
| Eco53kI | GAGCTC | 1 cut(s) | 943 |
| Eco57I | CTGAAG | 3 cut(s) | 148, 467, 505 |
| Eco88I | CYCGRG | 1 cut(s) | 1231 |
| EcoICRI | GAGCTC | 1 cut(s) | 943 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 224 |
| EcoO109I | RGGNCCY | 1 cut(s) | 152 |
| EcoRI | GAATTC | 1 cut(s) | 855 |
| EcoRII | CCWGG | 1 cut(s) | 692 |
| EcoT22I | ATGCAT | 1 cut(s) | 622 |
| EcoT38I | GRGCYC | 5 cut(s) | 717, 789, 945, 1232, 1290 |
| FaeI | CATG | 5 cut(s) | 86, 190, 384, 925, 949 |
| FaqI | GGGAC | 2 cut(s) | 35, 1378 |
| FatI | CATG | 5 cut(s) | 82, 186, 380, 921, 945 |
| FauNDI | CATATG | 1 cut(s) | 354 |
| FbaI | TGATCA | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 6 cut(s) | 10, 403, 452, 672, 729, 813 |
| FokI | GGATG | 5 cut(s) | 917, 948, 1248, 1323, 1363 |
| FriOI | GRGCYC | 5 cut(s) | 717, 789, 945, 1232, 1290 |
| Fsp4HI | GCNGC | 6 cut(s) | 10, 403, 452, 672, 729, 813 |
| FspBI | CTAG | 2 cut(s) | 956, 998 |
| GlaI | GCGC | 1 cut(s) | 307 |
| GluI | GCNGC | 6 cut(s) | 10, 403, 452, 672, 729, 813 |
| GsaI | CCCAGC | 1 cut(s) | 458 |
| HaeIII | GGCC | 4 cut(s) | 216, 332, 1175, 1391 |
| HhaI | GCGC | 1 cut(s) | 308 |
| Hin1II | CATG | 5 cut(s) | 86, 190, 384, 925, 949 |
| Hin6I | GCGC | 1 cut(s) | 306 |
| HinP1I | GCGC | 1 cut(s) | 306 |
| HincII | GTYRAC | 1 cut(s) | 1461 |
| HindII | GTYRAC | 1 cut(s) | 1461 |
| HindIII | AAGCTT | 1 cut(s) | 1242 |
| HinfI | GANTC | 2 cut(s) | 949, 1052 |
| HphI | GGTGA | 2 cut(s) | 89, 236 |
| Hpy166II | GTNNAC | 3 cut(s) | 424, 1082, 1461 |
| Hpy188I | TCNGA | 4 cut(s) | 338, 750, 861, 1486 |
| Hpy188III | TCNNGA | 5 cut(s) | 83, 412, 946, 1215, 1233 |
| Hpy8I | GTNNAC | 3 cut(s) | 424, 1082, 1461 |
| Hpy99I | CGWCG | 2 cut(s) | 272, 1410 |
| HpyAV | CCTTC | 5 cut(s) | 217, 343, 518, 970, 1009 |
| HpyCH4III | ACNGT | 2 cut(s) | 262, 1060 |
| HpyCH4IV | ACGT | 3 cut(s) | 426, 471, 1408 |
| HpyF3I | CTNAG | 2 cut(s) | 747, 1428 |
| HpySE526I | ACGT | 3 cut(s) | 426, 471, 1408 |
| Hsp92II | CATG | 5 cut(s) | 86, 190, 384, 925, 949 |
| HspAI | GCGC | 1 cut(s) | 306 |
| KpnI | GGTACC | 1 cut(s) | 352 |
| Ksp22I | TGATCA | 1 cut(s) | 79 |
| Kzo9I | GATC | 2 cut(s) | 79, 1353 |
| LmnI | GCTCC | 6 cut(s) | 338, 510, 940, 1001, 1019, 1293 |
| Lsp1109I | GCAGC | 6 cut(s) | 21, 389, 438, 658, 715, 799 |
| LweI | GCATC | 1 cut(s) | 895 |
| MaeI | CTAG | 2 cut(s) | 956, 998 |
| MaeII | ACGT | 3 cut(s) | 426, 471, 1408 |
| MaeIII | GTNAC | 1 cut(s) | 1177 |
| MalI | GATC | 2 cut(s) | 81, 1355 |
| MboI | GATC | 2 cut(s) | 79, 1353 |
| MboII | GAAGA | 3 cut(s) | 154, 1309, 1499 |
| MfeI | CAATTG | 1 cut(s) | 233 |
| MhlI | GDGCHC | 6 cut(s) | 717, 746, 789, 945, 1232, 1290 |
| MlsI | TGGCCA | 2 cut(s) | 216, 1391 |
| MluCI | AATT | 7 cut(s) | 233, 277, 794, 841, 855, 1025, 1182 |
| MluNI | TGGCCA | 2 cut(s) | 216, 1391 |
| MnlI | CCTC | 8 cut(s) | 220, 230, 407, 543, 756, 963, 1151, 1417 |
| Mox20I | TGGCCA | 2 cut(s) | 216, 1391 |
| Mph1103I | ATGCAT | 1 cut(s) | 622 |
| MscI | TGGCCA | 2 cut(s) | 216, 1391 |
| MseI | TTAA | 6 cut(s) | 570, 599, 615, 930, 1191, 1304 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| Msp20I | TGGCCA | 2 cut(s) | 216, 1391 |
| MspCI | CTTAAG | 1 cut(s) | 569 |
| MspR9I | CCNGG | 1 cut(s) | 694 |
| MunI | CAATTG | 1 cut(s) | 233 |
| MvaI | CCWGG | 1 cut(s) | 694 |
| NdeI | CATATG | 1 cut(s) | 354 |
| NdeII | GATC | 2 cut(s) | 79, 1353 |
| NlaIII | CATG | 5 cut(s) | 86, 190, 384, 925, 949 |
| NlaIV | GGNNCC | 6 cut(s) | 153, 340, 350, 506, 743, 1289 |
| NsiI | ATGCAT | 1 cut(s) | 622 |
| OliI | CACNNNNGTG | 1 cut(s) | 222 |
| PagI | TCATGA | 2 cut(s) | 82, 945 |
| PceI | AGGCCT | 1 cut(s) | 332 |
| PfeI | GAWTC | 2 cut(s) | 949, 1052 |
| PkrI | GCNGC | 6 cut(s) | 11, 404, 453, 673, 730, 814 |
| Ppu21I | YACGTR | 1 cut(s) | 427 |
| PpuMI | RGGWCCY | 1 cut(s) | 152 |
| PshBI | ATTAAT | 1 cut(s) | 930 |
| PsiI | TTATAA | 1 cut(s) | 1088 |
| Psp124BI | GAGCTC | 1 cut(s) | 945 |
| Psp5II | RGGWCCY | 1 cut(s) | 152 |
| Psp6I | CCWGG | 1 cut(s) | 692 |
| PspFI | CCCAGC | 1 cut(s) | 454 |
| PspGI | CCWGG | 1 cut(s) | 692 |
| PspN4I | GGNNCC | 6 cut(s) | 153, 340, 350, 506, 743, 1289 |
| PspPI | GGNCC | 2 cut(s) | 152, 229 |
| PspPPI | RGGWCCY | 1 cut(s) | 152 |
| RsaI | GTAC | 2 cut(s) | 350, 1083 |
| RsaNI | GTAC | 2 cut(s) | 349, 1082 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SacI | GAGCTC | 1 cut(s) | 945 |
| SaqAI | TTAA | 6 cut(s) | 570, 599, 615, 930, 1191, 1304 |
| SatI | GCNGC | 6 cut(s) | 10, 403, 452, 672, 729, 813 |
| Sau3AI | GATC | 2 cut(s) | 79, 1353 |
| Sau96I | GGNCC | 2 cut(s) | 152, 229 |
| ScrFI | CCNGG | 1 cut(s) | 694 |
| SduI | GDGCHC | 6 cut(s) | 717, 746, 789, 945, 1232, 1290 |
| SfaNI | GCATC | 1 cut(s) | 895 |
| SfcI | CTRYAG | 1 cut(s) | 16 |
| SinI | GGWCC | 2 cut(s) | 152, 229 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 2 cut(s) | 569, 1324 |
| SmoI | CTYRAG | 2 cut(s) | 569, 1324 |
| SnaBI | TACGTA | 1 cut(s) | 427 |
| Sse9I | AATT | 7 cut(s) | 233, 277, 794, 841, 855, 1025, 1182 |
| SseBI | AGGCCT | 1 cut(s) | 332 |
| SsiI | CCGC | 1 cut(s) | 735 |
| SspMI | CTAG | 2 cut(s) | 956, 998 |
| SstI | GAGCTC | 1 cut(s) | 945 |
| StuI | AGGCCT | 1 cut(s) | 332 |
| StyD4I | CCNGG | 1 cut(s) | 692 |
| TaaI | ACNGT | 2 cut(s) | 262, 1060 |
| TaiI | ACGT | 3 cut(s) | 429, 474, 1411 |
| TaqI | TCGA | 1 cut(s) | 1143 |
| TaqII | GACCGA | 1 cut(s) | 479 |
| TasI | AATT | 7 cut(s) | 233, 277, 794, 841, 855, 1025, 1182 |
| TatI | WGTACW | 1 cut(s) | 1081 |
| TfiI | GAWTC | 2 cut(s) | 949, 1052 |
| Tru1I | TTAA | 6 cut(s) | 570, 599, 615, 930, 1191, 1304 |
| Tru9I | TTAA | 6 cut(s) | 570, 599, 615, 930, 1191, 1304 |
| TscAI | CASTG | 3 cut(s) | 265, 566, 1460 |
| TseI | GCWGC | 6 cut(s) | 9, 402, 451, 671, 728, 812 |
| TspDTI | ATGAA | 2 cut(s) | 203, 628 |
| TspRI | CASTG | 3 cut(s) | 265, 566, 1460 |
| Vha464I | CTTAAG | 1 cut(s) | 569 |
| VpaK11BI | GGWCC | 2 cut(s) | 152, 229 |
| VspI | ATTAAT | 1 cut(s) | 930 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 224 |
| XapI | RAATTY | 3 cut(s) | 794, 855, 1025 |
| XspI | CTAG | 2 cut(s) | 956, 998 |
| Zsp2I | ATGCAT | 1 cut(s) | 622 |