Rh7CG483500

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000476
Physical Location & Seq
Forward (+)
65031128 .. 65040736
9609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG483500.1

Sequence Viewer

Length: 1509 bp
ATGGACAGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTCTGGTTCTTAATCAACCCTTATTACCAGAACCATCAACCAGAAACAGTACACCTGAAGATCTACCTCTTAAAAGCCTTCCATCAAGAGTTTGGATAGAAACCAAGAAACTATGGCGCATCGTGGGCCCCGCTATTGTCTCCCGGCTTGCCGGCTACACCATGACCGTCATTACTCAGGCCTTCGCTGGTCACCTCGGCGACAATGAGCTCGCTGCATTCTCGATCGTCAACAATGTCATCCTTGGCTTCTCATTTGGTCTCCTGTTGGGAATGGCAAGCGCGCTGGAAACTCTGTGTGGGCAAGCTTTTGGGGCCAAAAGGTACCCAATGCTCGGGATTTATCTCCAGAGATCGTGGATCGTGTTGTTCATCTGCTGCGTTGTGCTATCGCCAGTTTACATTTACGCTTCTCCGATTCTGAAACTAATCGGGCAAACAGATGAAGTGGCAGAGCTTTCGGAGGTGGTGTCCCTTTGGGTTTTGCCAATGCATTTCAGCTATGCAATTATGTTCCCATTGCAGAGGTTCTTGCAGAGCCAGCTCAAGAACTTTGTGACTTTGTGGATGTCCGTGGTGGCTTTGGTGTTTCATGCCCTGATAAGCTGGATTTTTGTGTATGTTTTGGATTTTGGGCTTGTGGGTGCGGCTGTGACTTTGGATATTTCATGGTGGCTCATGTGTTTCATGATGCTTGTGTATGTGACTTGTGGTTGGTGTCCGCTGAGTTGGGCAGGTTTGTCCATGGAGGCCTTTTCTGGGCTCTGGGAATTTGTCAAGCTTTCTGCTGCTTCTGGCGTCATGCTCTGCTTGGAATTTTGGTATTACAGAGTTTTGATATTGATGACTGGATTCTTATCGGATGCGACTCTTGCTGTTGATGCCTTATCAGTTTGCATGACTGTAAATGGGTGGGAGCTCATGATTCATTTAGGTTTCTTGGCTGGAGTCGGAGTAAGGGTAGCAAATGAGCTCGGAGCTGGAAATGGTCAGGGAGCAAAGTTTGCAACCAAGGTTGCCGTGGCTGAATCGAGCTTCATCTCCCTTTTCTTCTGTGTGCTCATTATCGCGTTACATGACAAGTTCGCATACATCTTCACATCAAGCACTACTGTCCTCCAAGCAGTTGATCACTTGTCTTACCTCTTGGCTGTCACCATTTTACTTAACGGGGTTCAACCCGTTTTGTCAGGCGTAGCTGTTGGCTCAGGATGGCAAGCATGGGTGGCATACGTAAATCTTTTCTGCTACTACATTGTTGGGCTCCCACTTGGAATAGTATTGGGATGGGTCGCTGACTATGGTGTTTTGGGTCTATGGTCTGGGATGATCCTTGGTGGAACTCTTGTACAAACTGTGATTTTGGCTATCATCACAGCACGACGTAATTGGGAAAATGAGGCAATAACTGCTGGCCAGCGGGTAAAGAAGTGGTCTACACCAGATAATCAAACAGAGGGACAGCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

502

Amino Acids

55.41

Weight (kDa)

4.91

Isoelectric Point (pI)

35.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 57 - 217 2.2e-30 MatE
MatE PF01554 279 - 439 1.4e-24 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 764
Acc65I GGTACC 1 cut(s) 363
AccB1I GGYRCC 1 cut(s) 363
AccI GTMKAC 1 cut(s) 1475
AccII CGCG 2 cut(s) 323, 1109
AciI CCGC 4 cut(s) 171, 686, 761, 1459
AclWI GGATC 2 cut(s) 407, 1363
AcoI YGGCCR 1 cut(s) 1453
AcsI RAATTY 2 cut(s) 809, 854
AcuI CTGAAG 1 cut(s) 117
AcyI GRCGYC 1 cut(s) 837
AfaI GTAC 3 cut(s) 91, 365, 1389
AfiI CCNNNNNNNGG 2 cut(s) 374, 798
AgsI TTSAA 1 cut(s) 1217
Alw21I GWGCWC 4 cut(s) 252, 960, 1014, 1101
Alw26I GTCTC 2 cut(s) 184, 305
AlwI GGATC 2 cut(s) 407, 1363
Ama87I CYCGRG 1 cut(s) 374
AoxI GGCC 5 cut(s) 166, 219, 354, 789, 1453
ApaI GGGCCC 1 cut(s) 170
ApeKI GCWGC 3 cut(s) 254, 417, 827
ApoI RAATTY 2 cut(s) 809, 854
Asp700I GAANNNNTTC 1 cut(s) 39
Asp718I GGTACC 1 cut(s) 363
AspLEI GCGC 3 cut(s) 159, 323, 325
AspS9I GGNCC 3 cut(s) 166, 167, 354
AsuC2I CCSGG 1 cut(s) 184
AsuHPI GGTGA 2 cut(s) 224, 1186
AvaI CYCGRG 1 cut(s) 374
BaeGI GKGCMC 1 cut(s) 170
BalI TGGCCA 1 cut(s) 1455
BanI GGYRCC 1 cut(s) 363
BanII GRGCYC 6 cut(s) 170, 252, 804, 960, 1014, 1305
Bbv12I GWGCWC 4 cut(s) 252, 960, 1014, 1101
BbvI GCAGC 3 cut(s) 241, 404, 814
BccI CCATC 4 cut(s) 82, 130, 1245, 1320
BceAI ACGGC 1 cut(s) 1043
BcgI CGANNNNNNTGC 2 cut(s) 480, 514
BclI TGATCA 1 cut(s) 1168
BcnI CCSGG 1 cut(s) 184
BcoDI GTCTC 2 cut(s) 184, 305
BfuAI ACCTGC 1 cut(s) 764
BglII AGATCT 1 cut(s) 100
BisI GCNGC 4 cut(s) 255, 418, 687, 828
BlsI GCNGC 4 cut(s) 256, 419, 688, 829
Bme1390I CCNGG 1 cut(s) 184
BmeT110I CYCGRG 1 cut(s) 374
BmgT120I GGNCC 3 cut(s) 166, 167, 354
BmiI GGNNCC 5 cut(s) 168, 169, 355, 365, 1304
BmrFI CCNGG 1 cut(s) 184
BmsI GCATC 4 cut(s) 168, 720, 892, 910
BpmI CTGGAG 2 cut(s) 371, 1005
Bpu10I CCTNAGC 1 cut(s) 1246
BpuEI CTTGAG 1 cut(s) 569
BpuMI CCSGG 1 cut(s) 184
BsaAI YACGTR 1 cut(s) 1273
BsaBI GATNNNNATC 1 cut(s) 895
BsaHI GRCGYC 1 cut(s) 837
BsaI GGTCTC 1 cut(s) 305
BsaJI CCNNGG 7 cut(s) 235, 283, 612, 783, 1050, 1059, 1372
BsaXI ACNNNNNCTCC 6 cut(s) 494, 524, 978, 984, 1008, 1014
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 798
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 2 cut(s) 434, 892
Bse3DI GCAATG 1 cut(s) 557
Bse8I GATNNNNATC 1 cut(s) 895
BseDI CCNNGG 7 cut(s) 235, 283, 612, 783, 1050, 1059, 1372
BseGI GGATG 6 cut(s) 279, 612, 907, 1256, 1331, 1371
BseJI GATNNNNATC 1 cut(s) 895
BseLI CCNNNNNNNGG 2 cut(s) 374, 798
BseMI GCAATG 1 cut(s) 557
BseMII CTCAG 3 cut(s) 230, 755, 1260
BseNI ACTGG 2 cut(s) 434, 892
BsePI GCGCGC 1 cut(s) 321
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 3 cut(s) 241, 404, 814
Bsh1236I CGCG 2 cut(s) 323, 1109
Bsh1285I CGRYCG 1 cut(s) 267
BshFI GGCC 5 cut(s) 168, 221, 356, 791, 1455
BshNI GGYRCC 1 cut(s) 363
BsiEI CGRYCG 1 cut(s) 267
BsiHKAI GWGCWC 4 cut(s) 252, 960, 1014, 1101
BsiHKCI CYCGRG 1 cut(s) 374
BsiSI CCGG 2 cut(s) 184, 192
BslFI GGGAC 1 cut(s) 496
BslI CCNNNNNNNGG 2 cut(s) 374, 798
BsmAI GTCTC 2 cut(s) 184, 305
BsmFI GGGAC 1 cut(s) 496
BsmI GAATGC 1 cut(s) 257
BsnI GGCC 5 cut(s) 168, 221, 356, 791, 1455
Bso31I GGTCTC 1 cut(s) 305
BsoBI CYCGRG 1 cut(s) 374
Bsp120I GGGCCC 1 cut(s) 166
Bsp1286I GDGCHC 7 cut(s) 170, 252, 804, 960, 1014, 1101, 1305
Bsp1407I TGTACA 1 cut(s) 1387
Bsp143I GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
Bsp19I CCATGG 1 cut(s) 783
BspACI CCGC 4 cut(s) 171, 686, 761, 1459
BspANI GGCC 5 cut(s) 168, 221, 356, 791, 1455
BspCNI CTCAG 3 cut(s) 229, 756, 1259
BspFNI CGCG 2 cut(s) 323, 1109
BspHI TCATGA 2 cut(s) 726, 960
BspLI GGNNCC 5 cut(s) 168, 169, 355, 365, 1304
BspMI ACCTGC 1 cut(s) 764
BspPI GGATC 2 cut(s) 407, 1363
BspT107I GGYRCC 1 cut(s) 363
BspTNI GGTCTC 1 cut(s) 305
BsrDI GCAATG 1 cut(s) 557
BsrFI RCCGGY 1 cut(s) 191
BsrGI TGTACA 1 cut(s) 1387
BsrI ACTGG 2 cut(s) 434, 892
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 7 cut(s) 235, 283, 612, 783, 1050, 1059, 1372
BssHII GCGCGC 1 cut(s) 321
BssMI GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
BssNI GRCGYC 1 cut(s) 837
BssT1I CCWWGG 4 cut(s) 283, 783, 1050, 1372
Bst4CI ACNGT 5 cut(s) 89, 208, 943, 1153, 1396
BstACI GRCGYC 1 cut(s) 837
BstAPI GCANNNNNTGC 2 cut(s) 1043, 1448
BstAUI TGTACA 1 cut(s) 1387
BstBAI YACGTR 1 cut(s) 1273
BstDEI CTNAG 3 cut(s) 216, 764, 1246
BstDSI CCRYGG 3 cut(s) 612, 783, 1059
BstEII GGTNACC 1 cut(s) 230
BstF5I GGATG 6 cut(s) 279, 612, 907, 1256, 1331, 1371
BstFNI CGCG 2 cut(s) 323, 1109
BstHHI GCGC 3 cut(s) 159, 323, 325
BstKTI GATC 6 cut(s) 103, 267, 395, 402, 1171, 1371
BstMAI GTCTC 2 cut(s) 184, 305
BstMBI GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
BstMCI CGRYCG 1 cut(s) 267
BstMWI GCNNNNNNNGC 8 cut(s) 165, 353, 580, 911, 920, 1043, 1265, 1448
BstPI GGTNACC 1 cut(s) 230
BstSCI CCNGG 1 cut(s) 182
BstSLI GKGCMC 1 cut(s) 170
BstSNI TACGTA 1 cut(s) 1273
BstUI CGCG 2 cut(s) 323, 1109
BstV1I GCAGC 3 cut(s) 241, 404, 814
BstX2I RGATCY 1 cut(s) 100
BstYI RGATCY 1 cut(s) 100
BsuRI GGCC 5 cut(s) 168, 221, 356, 791, 1455
BtgI CCRYGG 3 cut(s) 612, 783, 1059
BtsCI GGATG 6 cut(s) 279, 612, 907, 1256, 1331, 1371
BveI ACCTGC 1 cut(s) 764
CciI TCATGA 2 cut(s) 726, 960
CfoI GCGC 3 cut(s) 159, 323, 325
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 3 cut(s) 166, 167, 354
CseI GACGC 1 cut(s) 826
Csp6I GTAC 3 cut(s) 90, 364, 1388
CviQI GTAC 3 cut(s) 90, 364, 1388
DdeI CTNAG 3 cut(s) 216, 764, 1246
DpnI GATC 6 cut(s) 102, 266, 394, 401, 1170, 1370
DpnII GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
EaeI YGGCCR 1 cut(s) 1453
Ecl136II GAGCTC 3 cut(s) 250, 958, 1012
Eco105I TACGTA 1 cut(s) 1273
Eco130I CCWWGG 4 cut(s) 283, 783, 1050, 1372
Eco147I AGGCCT 2 cut(s) 221, 791
Eco24I GRGCYC 6 cut(s) 170, 252, 804, 960, 1014, 1305
Eco31I GGTCTC 1 cut(s) 305
Eco53kI GAGCTC 3 cut(s) 250, 958, 1012
Eco57I CTGAAG 1 cut(s) 117
Eco88I CYCGRG 1 cut(s) 374
Eco91I GGTNACC 1 cut(s) 230
EcoICRI GAGCTC 3 cut(s) 250, 958, 1012
EcoO109I RGGNCCY 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 230
EcoT14I CCWWGG 4 cut(s) 283, 783, 1050, 1372
EcoT22I ATGCAT 1 cut(s) 534
EcoT38I GRGCYC 6 cut(s) 170, 252, 804, 960, 1014, 1305
ErhI CCWWGG 4 cut(s) 283, 783, 1050, 1372
FaqI GGGAC 1 cut(s) 496
FauI CCCGC 2 cut(s) 178, 1452
FbaI TGATCA 1 cut(s) 1168
FblI GTMKAC 1 cut(s) 1475
Fnu4HI GCNGC 4 cut(s) 255, 418, 687, 828
FokI GGATG 6 cut(s) 266, 619, 914, 1263, 1338, 1378
FriOI GRGCYC 6 cut(s) 170, 252, 804, 960, 1014, 1305
Fsp4HI GCNGC 4 cut(s) 255, 418, 687, 828
GlaI GCGC 3 cut(s) 158, 322, 324
GluI GCNGC 4 cut(s) 255, 418, 687, 828
GsuI CTGGAG 2 cut(s) 371, 1005
HaeIII GGCC 5 cut(s) 168, 221, 356, 791, 1455
HapII CCGG 2 cut(s) 184, 192
HgaI GACGC 1 cut(s) 826
HhaI GCGC 3 cut(s) 159, 323, 325
Hin1I GRCGYC 1 cut(s) 837
Hin6I GCGC 3 cut(s) 157, 321, 323
HinP1I GCGC 3 cut(s) 157, 321, 323
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HindIII AAGCTT 2 cut(s) 345, 818
HinfI GANTC 6 cut(s) 457, 891, 907, 964, 987, 1067
HpaII CCGG 2 cut(s) 184, 192
HphI GGTGA 2 cut(s) 224, 1186
Hpy166II GTNNAC 4 cut(s) 92, 271, 439, 1476
Hpy188I TCNGA 6 cut(s) 456, 462, 502, 901, 992, 1016
Hpy188III TCNNGA 8 cut(s) 126, 262, 376, 388, 586, 727, 961, 1248
Hpy8I GTNNAC 4 cut(s) 92, 271, 439, 1476
Hpy99I CGWCG 1 cut(s) 1425
HpyAV CCTTC 2 cut(s) 128, 232
HpyCH4III ACNGT 5 cut(s) 89, 208, 943, 1153, 1396
HpyCH4IV ACGT 2 cut(s) 1272, 1423
HpyCH4V TGCA 7 cut(s) 257, 532, 545, 562, 574, 936, 1046
HpyF10VI GCNNNNNNNGC 8 cut(s) 165, 353, 580, 911, 920, 1043, 1265, 1448
HpyF3I CTNAG 3 cut(s) 216, 764, 1246
HpySE526I ACGT 2 cut(s) 1272, 1423
Hsp92I GRCGYC 1 cut(s) 837
HspAI GCGC 3 cut(s) 157, 321, 323
KpnI GGTACC 1 cut(s) 367
KroI GCCGGC 1 cut(s) 191
KroNI GCCGGC 1 cut(s) 193
Ksp22I TGATCA 1 cut(s) 1168
Kzo9I GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
LmnI GCTCC 4 cut(s) 955, 1016, 1034, 1308
Lsp1109I GCAGC 3 cut(s) 241, 404, 814
LweI GCATC 4 cut(s) 168, 720, 892, 910
MaeII ACGT 2 cut(s) 1272, 1423
MaeIII GTNAC 6 cut(s) 230, 595, 691, 742, 1110, 1192
MalI GATC 6 cut(s) 102, 266, 394, 401, 1170, 1370
MboI GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
MflI RGATCY 1 cut(s) 100
MhlI GDGCHC 7 cut(s) 170, 252, 804, 960, 1014, 1101, 1305
MlsI TGGCCA 1 cut(s) 1455
MluCI AATT 4 cut(s) 546, 809, 854, 1426
MluNI TGGCCA 1 cut(s) 1455
MlyI GAGTC 2 cut(s) 901, 996
MmeI TCCRAC 1 cut(s) 970
MnlI CCTC 9 cut(s) 117, 245, 496, 558, 781, 1166, 1193, 1432, 1489
Mox20I TGGCCA 1 cut(s) 1455
Mph1103I ATGCAT 1 cut(s) 534
MroNI GCCGGC 1 cut(s) 191
MroXI GAANNNNTTC 1 cut(s) 39
MscI TGGCCA 1 cut(s) 1455
MseI TTAA 3 cut(s) 51, 111, 1206
Msp20I TGGCCA 1 cut(s) 1455
MspA1I CMGCKG 2 cut(s) 763, 1459
MspI CCGG 2 cut(s) 184, 192
MspR9I CCNGG 1 cut(s) 184
Mva1269I GAATGC 1 cut(s) 257
MvnI CGCG 2 cut(s) 323, 1109
MwoI GCNNNNNNNGC 8 cut(s) 165, 353, 580, 911, 920, 1043, 1265, 1448
NaeI GCCGGC 1 cut(s) 193
NciI CCSGG 1 cut(s) 184
NcoI CCATGG 1 cut(s) 783
NdeII GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
NgoMIV GCCGGC 1 cut(s) 191
NlaIV GGNNCC 5 cut(s) 168, 169, 355, 365, 1304
NmeAIII GCCGAG 1 cut(s) 216
NmuCI GTSAC 5 cut(s) 230, 595, 691, 742, 1192
NsiI ATGCAT 1 cut(s) 534
PagI TCATGA 2 cut(s) 726, 960
PauI GCGCGC 1 cut(s) 321
PceI AGGCCT 2 cut(s) 221, 791
PctI GAATGC 1 cut(s) 257
PdiI GCCGGC 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 4 cut(s) 457, 891, 964, 1067
PkrI GCNGC 4 cut(s) 256, 419, 688, 829
Ple19I CGATCG 1 cut(s) 267
PleI GAGTC 2 cut(s) 901, 995
PpsI GAGTC 2 cut(s) 901, 995
Ppu21I YACGTR 1 cut(s) 1273
Psp124BI GAGCTC 3 cut(s) 252, 960, 1014
PspEI GGTNACC 1 cut(s) 230
PspN4I GGNNCC 5 cut(s) 168, 169, 355, 365, 1304
PspOMI GGGCCC 1 cut(s) 166
PspPI GGNCC 3 cut(s) 166, 167, 354
PsuI RGATCY 1 cut(s) 100
PteI GCGCGC 1 cut(s) 321
PvuI CGATCG 1 cut(s) 267
RsaI GTAC 3 cut(s) 91, 365, 1389
RsaNI GTAC 3 cut(s) 90, 364, 1388
SacI GAGCTC 3 cut(s) 252, 960, 1014
SaqAI TTAA 3 cut(s) 51, 111, 1206
SatI GCNGC 4 cut(s) 255, 418, 687, 828
Sau3AI GATC 6 cut(s) 100, 264, 392, 399, 1168, 1368
Sau96I GGNCC 3 cut(s) 166, 167, 354
SchI GAGTC 2 cut(s) 901, 996
ScrFI CCNGG 1 cut(s) 184
SduI GDGCHC 7 cut(s) 170, 252, 804, 960, 1014, 1101, 1305
SfaNI GCATC 4 cut(s) 168, 720, 892, 910
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
SnaBI TACGTA 1 cut(s) 1273
Sse9I AATT 4 cut(s) 546, 809, 854, 1426
SseBI AGGCCT 2 cut(s) 221, 791
SsiI CCGC 4 cut(s) 171, 686, 761, 1459
SstI GAGCTC 3 cut(s) 252, 960, 1014
StuI AGGCCT 2 cut(s) 221, 791
StyD4I CCNGG 1 cut(s) 182
StyI CCWWGG 4 cut(s) 283, 783, 1050, 1372
TaaI ACNGT 5 cut(s) 89, 208, 943, 1153, 1396
TaiI ACGT 2 cut(s) 1275, 1426
TaqI TCGA 2 cut(s) 263, 1070
TasI AATT 4 cut(s) 546, 809, 854, 1426
TatI WGTACW 2 cut(s) 89, 1387
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 4 cut(s) 457, 891, 964, 1067
Tru1I TTAA 3 cut(s) 51, 111, 1206
Tru9I TTAA 3 cut(s) 51, 111, 1206
TseFI GTSAC 5 cut(s) 230, 595, 691, 742, 1192
TseI GCWGC 3 cut(s) 254, 417, 827
Tsp45I GTSAC 5 cut(s) 230, 595, 691, 742, 1192
TspDTI ATGAA 7 cut(s) 400, 498, 620, 696, 715, 956, 1066
TspGWI ACGGA 1 cut(s) 601
XapI RAATTY 2 cut(s) 809, 854
XcmI CCANNNNNNNNNTGG 2 cut(s) 129, 1057
XmiI GTMKAC 1 cut(s) 1475
XmnI GAANNNNTTC 1 cut(s) 39
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.