Rh7DG451800

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000476
Physical Location & Seq
Forward (+)
64296676 .. 64304072
7397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG451800.1

Sequence Viewer

Length: 1503 bp
ATGGACAGGGGAGAAGAAGAAGAAGAAGAAGAAGTTCTGGTTCTTAATCATCCCTTATTACCAGAACCATCAACCAGAAACGGTACACCTGAAGATCTACCTCTTAAAAGCCTTCCATCAAGAGTTTGGATAGAAACCAAGAAACTATGGCGCGTCGTGGGCCCCGCTATCATCTCCCGGCTTGCCGGCTACTCCATGACCGTCATTACTCAGGCCTTCGCTGGTCACCTCGGCGACAATGAGCTCGCTGCATTCTCGATCGTCAACAATGTCATCCTCGGCTTCTCATTTGGTCTCCTGTTGGGAATGGCAAGCGCGCTGGAAACTCTGTGTGGGCAAGCTTTTGGGGCCAAAAGGTACCCAATGCTCGGGATTTATCTCCAGAGATCGTGGATCGTGTTGTTCATCTGCTGCGTTGTGCTATCGCCAGTTTACATTTACGCTTCTCCGATTCTGAAACTAATCGGGCAGACAGATGAAGTGGCAGAGCTTTCGGAGGTGGTGTCCCTTTGGGTTTTGCCAATGCATTTCAGCTATGCAATTGAGTTCCCATTGCAGAGGTTCTTGCAGAGCCAGCTCAAGAACTTTGTGACTTTGTGGATGTCCGTGGTGGTCTTGGTGTTTCATGCCCTGATAAGCTGGATTTTTGTGTATGTTTTGGATTTTGGGCTTGTGGGTGCGGCTGTGACTTTGGATATTTCATGGTGGCTCTCGTGTTTCATGATGCTTGTGTATGTGACTTGTGGTTGGTGTCCGCTGAGTTGGGCAGGTTTGTCCATGGAGGCCTTTTCTGGGCTCTGGGAATTTGTCAAGCTTTCTGCTGCTTCTGGCGTCATGGTCTGCTTGGAATTTTGGTATTACAGAGTTTTGATATTGATGACCGGATTCTTATCGGATGCAACTCTTGCTGTTGATGCCTTATCAGTTTGCATGGCTGTAAATGGGTGGGAGCTCATGATTCATTTAGGTTTCTTGGCTGGAGTCGGAGTAAGGGTAGCAAATGAGCTCGGAGCTGGAAATGGTCAGGGAGCAAAGTTTGCAACCAAGGTTGCCGTGGCTGAATCGAGCTTCATCTCCCTTTTCTTCTGTGTGCTCATTATCACGTTACATGACAAGTTCGCATACATCTTCACATCAAGCACTACTGTCCTCCTAGCAGTTGATCACTTGTCTTACCTCTTGGCTGTCACCATTTTACTTAACGGGGTTCAACCCGTTTTGTCAGGCGTAGCTGTTGGCTCAGGATGGCAAGCATGGGTGGCATACGTAAATCTTTTCTGCTACTACATTGTTGGGCTCCCACTTGGAATAGTATTGGGATGGGTCGCTGACTATGGTGTTTTGGGTCTATGGTCTGGGATGATCCTTGGTGGAACTCTTGTACAAACTGTGATTTTGGCTATCATCACAGCACGACGTAATTGGGAAAATGAGGCAATAACTGCTGGCCAGCGGGTAAAGAAGTGGTCTACACGAGATAATCAAATAGAGGGACAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MatE

Protein Analysis

500

Amino Acids

55.07

Weight (kDa)

5.16

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 55 - 215 1.2e-30 MatE
MatE PF01554 277 - 437 5.3e-23 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000476)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10420 AT5G44050 AT5G65380
fragaria_vesca FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_1g20090 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36160 FvH4_5g36170 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_5g36191 FvH4_7g30730 FvH4_7g30730
malus_domestica MD01G1032800.v1.1 MD08G1190900.v1.1 MD08G1191000.v1.1 MD15G1378200.v1.1 MD15G1378900.v1.1 MD15G1379100.v1.1
prunus_persica Prupe.1G524800_v2.0.a1 Prupe.1G525000_v2.0.a1 Prupe.1G525200_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.1G525300_v2.0.a1 Prupe.6G195500_v2.0.a1
pyrus_communis pycom01g06450 pycom08g16390 pycom15g33900 pycom15g33930 pycom15g33950
rosa_chinensis RchiOBHm_Chr2g0112071 RchiOBHm_Chr7g0237941 RchiOBHm_Chr7g0237951 RchiOBHm_Chr7g0237971 RchiOBHm_Chr7g0238021
rosa_laevigata RLG00000000946 RLG00000000947 RLG00000000949 RLG00000017947
rosa_multiflora Rmu_co8087868.1_g000001 Rmu_co8407183.1_g000001 Rmu_co8459217.1_g000001 Rmu_sc0001339.1_g000020 Rmu_sc0002041.1_g000021 Rmu_sc0002586.1_g000009 Rmu_sc0002877.1_g000026 Rmu_sc0002877.1_g000032
rosa_roxburghii Rroxscaffold_2G00131800 Rroxscaffold_3G00223450 Rroxscaffold_3G00223470 Rroxscaffold_3G00223480
rosa_rugosa Rorug02G0178300 Rorug07G0309600 Rorug07G0309700.1 Rorug07G0309800.1 Rorug07G0309900.1 Rorug07G0310000 Rorug07G0310100
rosa_samantha Rh2AG230300 Rh2BG243500 Rh2DG238200 Rh7AG464600 Rh7AG464700 Rh7AG464900 Rh7BG435300 Rh7BG435600 Rh7CG482800 Rh7CG483100 Rh7CG483500 Rh7DG451500 Rh7DG451700 Rh7DG451800
rosa_wichuraiana Rw2G017840 Rw2G017890 Rw7G038490 Rw7G038500 Rw7G038510 Rw7G038540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 758
Acc65I GGTACC 1 cut(s) 357
AccB1I GGYRCC 1 cut(s) 357
AccI GTMKAC 1 cut(s) 1469
AccII CGCG 2 cut(s) 153, 317
AciI CCGC 4 cut(s) 165, 680, 755, 1453
AclWI GGATC 2 cut(s) 401, 1357
AcoI YGGCCR 1 cut(s) 1447
AcsI RAATTY 2 cut(s) 803, 848
AcuI CTGAAG 1 cut(s) 111
AcyI GRCGYC 1 cut(s) 831
AfaI GTAC 3 cut(s) 85, 359, 1383
AfiI CCNNNNNNNGG 2 cut(s) 368, 792
AgsI TTSAA 1 cut(s) 1211
Alw21I GWGCWC 4 cut(s) 246, 954, 1008, 1095
Alw26I GTCTC 1 cut(s) 299
AlwI GGATC 2 cut(s) 401, 1357
Ama87I CYCGRG 1 cut(s) 368
AoxI GGCC 5 cut(s) 160, 213, 348, 783, 1447
ApaI GGGCCC 1 cut(s) 164
ApeKI GCWGC 3 cut(s) 248, 411, 821
ApoI RAATTY 2 cut(s) 803, 848
Asp700I GAANNNNTTC 1 cut(s) 33
Asp718I GGTACC 1 cut(s) 357
AspLEI GCGC 3 cut(s) 153, 317, 319
AspS9I GGNCC 3 cut(s) 160, 161, 348
AsuC2I CCSGG 1 cut(s) 178
AsuHPI GGTGA 2 cut(s) 218, 1180
AvaI CYCGRG 1 cut(s) 368
BaeGI GKGCMC 1 cut(s) 164
BalI TGGCCA 1 cut(s) 1449
BanI GGYRCC 1 cut(s) 357
BanII GRGCYC 6 cut(s) 164, 246, 798, 954, 1008, 1299
BauI CACGAG 2 cut(s) 712, 1473
Bbv12I GWGCWC 4 cut(s) 246, 954, 1008, 1095
BbvI GCAGC 3 cut(s) 235, 398, 808
BccI CCATC 4 cut(s) 76, 124, 1239, 1314
BceAI ACGGC 1 cut(s) 1037
BcgI CGANNNNNNTGC 2 cut(s) 474, 508
BclI TGATCA 1 cut(s) 1162
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 299
BfaI CTAG 1 cut(s) 1154
BfuAI ACCTGC 1 cut(s) 758
BglII AGATCT 1 cut(s) 94
BisI GCNGC 4 cut(s) 249, 412, 681, 822
BlsI GCNGC 4 cut(s) 250, 413, 682, 823
Bme1390I CCNGG 1 cut(s) 178
BmeT110I CYCGRG 1 cut(s) 368
BmgT120I GGNCC 3 cut(s) 160, 161, 348
BmiI GGNNCC 5 cut(s) 162, 163, 349, 359, 1298
BmrFI CCNGG 1 cut(s) 178
BmsI GCATC 3 cut(s) 714, 886, 904
BpmI CTGGAG 2 cut(s) 365, 999
Bpu10I CCTNAGC 1 cut(s) 1240
BpuEI CTTGAG 1 cut(s) 563
BpuMI CCSGG 1 cut(s) 178
BsaAI YACGTR 1 cut(s) 1267
BsaBI GATNNNNATC 1 cut(s) 889
BsaHI GRCGYC 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 299
BsaJI CCNNGG 7 cut(s) 229, 277, 606, 777, 1044, 1053, 1366
BsaWI WCCGGW 1 cut(s) 881
BsaXI ACNNNNNCTCC 6 cut(s) 488, 518, 972, 978, 1002, 1008
Bsc4I CCNNNNNNNGG 2 cut(s) 368, 792
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 1 cut(s) 428
Bse3DI GCAATG 1 cut(s) 551
Bse8I GATNNNNATC 1 cut(s) 889
BseDI CCNNGG 7 cut(s) 229, 277, 606, 777, 1044, 1053, 1366
BseGI GGATG 7 cut(s) 49, 273, 606, 901, 1250, 1325, 1365
BseJI GATNNNNATC 1 cut(s) 889
BseLI CCNNNNNNNGG 2 cut(s) 368, 792
BseMI GCAATG 1 cut(s) 551
BseMII CTCAG 3 cut(s) 224, 749, 1254
BseNI ACTGG 1 cut(s) 428
BsePI GCGCGC 1 cut(s) 315
BseSI GKGCMC 1 cut(s) 164
BseXI GCAGC 3 cut(s) 235, 398, 808
Bsh1236I CGCG 2 cut(s) 153, 317
Bsh1285I CGRYCG 1 cut(s) 261
BshFI GGCC 5 cut(s) 162, 215, 350, 785, 1449
BshNI GGYRCC 1 cut(s) 357
BsiEI CGRYCG 1 cut(s) 261
BsiHKAI GWGCWC 4 cut(s) 246, 954, 1008, 1095
BsiHKCI CYCGRG 1 cut(s) 368
BsiSI CCGG 3 cut(s) 178, 186, 882
BslFI GGGAC 1 cut(s) 490
BslI CCNNNNNNNGG 2 cut(s) 368, 792
BsmAI GTCTC 1 cut(s) 299
BsmFI GGGAC 1 cut(s) 490
BsmI GAATGC 1 cut(s) 251
BsnI GGCC 5 cut(s) 162, 215, 350, 785, 1449
Bso31I GGTCTC 1 cut(s) 299
BsoBI CYCGRG 1 cut(s) 368
Bsp120I GGGCCC 1 cut(s) 160
Bsp1286I GDGCHC 7 cut(s) 164, 246, 798, 954, 1008, 1095, 1299
Bsp1407I TGTACA 1 cut(s) 1381
Bsp143I GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
Bsp19I CCATGG 1 cut(s) 777
BspACI CCGC 4 cut(s) 165, 680, 755, 1453
BspANI GGCC 5 cut(s) 162, 215, 350, 785, 1449
BspCNI CTCAG 3 cut(s) 223, 750, 1253
BspFNI CGCG 2 cut(s) 153, 317
BspHI TCATGA 2 cut(s) 720, 954
BspLI GGNNCC 5 cut(s) 162, 163, 349, 359, 1298
BspMI ACCTGC 1 cut(s) 758
BspPI GGATC 2 cut(s) 401, 1357
BspT107I GGYRCC 1 cut(s) 357
BspTNI GGTCTC 1 cut(s) 299
BsrDI GCAATG 1 cut(s) 551
BsrFI RCCGGY 1 cut(s) 185
BsrGI TGTACA 1 cut(s) 1381
BsrI ACTGG 1 cut(s) 428
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 7 cut(s) 229, 277, 606, 777, 1044, 1053, 1366
BssHII GCGCGC 1 cut(s) 315
BssMI GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
BssNI GRCGYC 1 cut(s) 831
BssSI CACGAG 2 cut(s) 712, 1473
BssT1I CCWWGG 3 cut(s) 777, 1044, 1366
Bst2BI CACGAG 2 cut(s) 712, 1473
Bst4CI ACNGT 4 cut(s) 83, 202, 1147, 1390
BstACI GRCGYC 1 cut(s) 831
BstAPI GCANNNNNTGC 3 cut(s) 905, 1037, 1442
BstAUI TGTACA 1 cut(s) 1381
BstBAI YACGTR 1 cut(s) 1267
BstDEI CTNAG 3 cut(s) 210, 758, 1240
BstDSI CCRYGG 3 cut(s) 606, 777, 1053
BstEII GGTNACC 1 cut(s) 224
BstF5I GGATG 7 cut(s) 49, 273, 606, 901, 1250, 1325, 1365
BstFNI CGCG 2 cut(s) 153, 317
BstHHI GCGC 3 cut(s) 153, 317, 319
BstKTI GATC 6 cut(s) 97, 261, 389, 396, 1165, 1365
BstMAI GTCTC 1 cut(s) 299
BstMBI GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
BstMCI CGRYCG 1 cut(s) 261
BstMWI GCNNNNNNNGC 8 cut(s) 159, 347, 574, 905, 914, 1037, 1259, 1442
BstPI GGTNACC 1 cut(s) 224
BstSCI CCNGG 1 cut(s) 176
BstSLI GKGCMC 1 cut(s) 164
BstSNI TACGTA 1 cut(s) 1267
BstUI CGCG 2 cut(s) 153, 317
BstV1I GCAGC 3 cut(s) 235, 398, 808
BstX2I RGATCY 1 cut(s) 94
BstYI RGATCY 1 cut(s) 94
BsuRI GGCC 5 cut(s) 162, 215, 350, 785, 1449
BtgI CCRYGG 3 cut(s) 606, 777, 1053
BtsCI GGATG 7 cut(s) 49, 273, 606, 901, 1250, 1325, 1365
BveI ACCTGC 1 cut(s) 758
CciI TCATGA 2 cut(s) 720, 954
CfoI GCGC 3 cut(s) 153, 317, 319
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 3 cut(s) 160, 161, 348
CseI GACGC 2 cut(s) 142, 820
Csp6I GTAC 3 cut(s) 84, 358, 1382
CviQI GTAC 3 cut(s) 84, 358, 1382
DdeI CTNAG 3 cut(s) 210, 758, 1240
DpnI GATC 6 cut(s) 96, 260, 388, 395, 1164, 1364
DpnII GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
EaeI YGGCCR 1 cut(s) 1447
Ecl136II GAGCTC 3 cut(s) 244, 952, 1006
Eco105I TACGTA 1 cut(s) 1267
Eco130I CCWWGG 3 cut(s) 777, 1044, 1366
Eco147I AGGCCT 2 cut(s) 215, 785
Eco24I GRGCYC 6 cut(s) 164, 246, 798, 954, 1008, 1299
Eco31I GGTCTC 1 cut(s) 299
Eco53kI GAGCTC 3 cut(s) 244, 952, 1006
Eco57I CTGAAG 1 cut(s) 111
Eco88I CYCGRG 1 cut(s) 368
Eco91I GGTNACC 1 cut(s) 224
EcoICRI GAGCTC 3 cut(s) 244, 952, 1006
EcoO109I RGGNCCY 1 cut(s) 161
EcoO65I GGTNACC 1 cut(s) 224
EcoT14I CCWWGG 3 cut(s) 777, 1044, 1366
EcoT22I ATGCAT 1 cut(s) 528
EcoT38I GRGCYC 6 cut(s) 164, 246, 798, 954, 1008, 1299
ErhI CCWWGG 3 cut(s) 777, 1044, 1366
FaqI GGGAC 1 cut(s) 490
FauI CCCGC 2 cut(s) 172, 1446
FbaI TGATCA 1 cut(s) 1162
FblI GTMKAC 1 cut(s) 1469
Fnu4HI GCNGC 4 cut(s) 249, 412, 681, 822
FokI GGATG 7 cut(s) 36, 260, 613, 908, 1257, 1332, 1372
FriOI GRGCYC 6 cut(s) 164, 246, 798, 954, 1008, 1299
Fsp4HI GCNGC 4 cut(s) 249, 412, 681, 822
FspBI CTAG 1 cut(s) 1154
GlaI GCGC 3 cut(s) 152, 316, 318
GluI GCNGC 4 cut(s) 249, 412, 681, 822
GsuI CTGGAG 2 cut(s) 365, 999
HaeIII GGCC 5 cut(s) 162, 215, 350, 785, 1449
HapII CCGG 3 cut(s) 178, 186, 882
HgaI GACGC 2 cut(s) 142, 820
HhaI GCGC 3 cut(s) 153, 317, 319
Hin1I GRCGYC 1 cut(s) 831
Hin6I GCGC 3 cut(s) 151, 315, 317
HinP1I GCGC 3 cut(s) 151, 315, 317
HincII GTYRAC 1 cut(s) 265
HindII GTYRAC 1 cut(s) 265
HindIII AAGCTT 2 cut(s) 339, 812
HinfI GANTC 5 cut(s) 451, 885, 958, 981, 1061
HpaII CCGG 3 cut(s) 178, 186, 882
HphI GGTGA 2 cut(s) 218, 1180
Hpy166II GTNNAC 4 cut(s) 86, 265, 433, 1470
Hpy188I TCNGA 6 cut(s) 450, 456, 496, 895, 986, 1010
Hpy188III TCNNGA 8 cut(s) 120, 256, 370, 382, 580, 721, 955, 1242
Hpy8I GTNNAC 4 cut(s) 86, 265, 433, 1470
Hpy99I CGWCG 2 cut(s) 158, 1419
HpyAV CCTTC 2 cut(s) 122, 226
HpyCH4III ACNGT 4 cut(s) 83, 202, 1147, 1390
HpyCH4IV ACGT 3 cut(s) 1103, 1266, 1417
HpyCH4V TGCA 8 cut(s) 251, 526, 539, 556, 568, 899, 930, 1040
HpyF10VI GCNNNNNNNGC 8 cut(s) 159, 347, 574, 905, 914, 1037, 1259, 1442
HpyF3I CTNAG 3 cut(s) 210, 758, 1240
HpySE526I ACGT 3 cut(s) 1103, 1266, 1417
Hsp92I GRCGYC 1 cut(s) 831
HspAI GCGC 3 cut(s) 151, 315, 317
KpnI GGTACC 1 cut(s) 361
KroI GCCGGC 1 cut(s) 185
KroNI GCCGGC 1 cut(s) 187
Ksp22I TGATCA 1 cut(s) 1162
Kzo9I GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
LmnI GCTCC 4 cut(s) 949, 1010, 1028, 1302
Lsp1109I GCAGC 3 cut(s) 235, 398, 808
LweI GCATC 3 cut(s) 714, 886, 904
MaeI CTAG 1 cut(s) 1154
MaeII ACGT 3 cut(s) 1103, 1266, 1417
MaeIII GTNAC 6 cut(s) 224, 589, 685, 736, 1104, 1186
MalI GATC 6 cut(s) 96, 260, 388, 395, 1164, 1364
MboI GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
MboII GAAGA 9 cut(s) 26, 29, 32, 35, 38, 41, 104, 1075, 1120
MfeI CAATTG 1 cut(s) 540
MflI RGATCY 1 cut(s) 94
MhlI GDGCHC 7 cut(s) 164, 246, 798, 954, 1008, 1095, 1299
MlsI TGGCCA 1 cut(s) 1449
MluCI AATT 4 cut(s) 540, 803, 848, 1420
MluNI TGGCCA 1 cut(s) 1449
MlyI GAGTC 1 cut(s) 990
MmeI TCCRAC 1 cut(s) 964
Mox20I TGGCCA 1 cut(s) 1449
Mph1103I ATGCAT 1 cut(s) 528
MroNI GCCGGC 1 cut(s) 185
MroXI GAANNNNTTC 1 cut(s) 33
MscI TGGCCA 1 cut(s) 1449
MseI TTAA 3 cut(s) 45, 105, 1200
Msp20I TGGCCA 1 cut(s) 1449
MspA1I CMGCKG 2 cut(s) 757, 1453
MspI CCGG 3 cut(s) 178, 186, 882
MspR9I CCNGG 1 cut(s) 178
MunI CAATTG 1 cut(s) 540
Mva1269I GAATGC 1 cut(s) 251
MvnI CGCG 2 cut(s) 153, 317
MwoI GCNNNNNNNGC 8 cut(s) 159, 347, 574, 905, 914, 1037, 1259, 1442
NaeI GCCGGC 1 cut(s) 187
NciI CCSGG 1 cut(s) 178
NcoI CCATGG 1 cut(s) 777
NdeII GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
NgoMIV GCCGGC 1 cut(s) 185
NlaIV GGNNCC 5 cut(s) 162, 163, 349, 359, 1298
NmeAIII GCCGAG 2 cut(s) 210, 258
NmuCI GTSAC 5 cut(s) 224, 589, 685, 736, 1186
NsiI ATGCAT 1 cut(s) 528
PagI TCATGA 2 cut(s) 720, 954
PauI GCGCGC 1 cut(s) 315
PceI AGGCCT 2 cut(s) 215, 785
PctI GAATGC 1 cut(s) 251
PdiI GCCGGC 1 cut(s) 187
PdmI GAANNNNTTC 1 cut(s) 33
PfeI GAWTC 4 cut(s) 451, 885, 958, 1061
PkrI GCNGC 4 cut(s) 250, 413, 682, 823
Ple19I CGATCG 1 cut(s) 261
PleI GAGTC 1 cut(s) 989
PpsI GAGTC 1 cut(s) 989
Ppu21I YACGTR 1 cut(s) 1267
Psp124BI GAGCTC 3 cut(s) 246, 954, 1008
PspEI GGTNACC 1 cut(s) 224
PspN4I GGNNCC 5 cut(s) 162, 163, 349, 359, 1298
PspOMI GGGCCC 1 cut(s) 160
PspPI GGNCC 3 cut(s) 160, 161, 348
PsuI RGATCY 1 cut(s) 94
PteI GCGCGC 1 cut(s) 315
PvuI CGATCG 1 cut(s) 261
RsaI GTAC 3 cut(s) 85, 359, 1383
RsaNI GTAC 3 cut(s) 84, 358, 1382
SacI GAGCTC 3 cut(s) 246, 954, 1008
SaqAI TTAA 3 cut(s) 45, 105, 1200
SatI GCNGC 4 cut(s) 249, 412, 681, 822
Sau3AI GATC 6 cut(s) 94, 258, 386, 393, 1162, 1362
Sau96I GGNCC 3 cut(s) 160, 161, 348
SchI GAGTC 1 cut(s) 990
ScrFI CCNGG 1 cut(s) 178
SduI GDGCHC 7 cut(s) 164, 246, 798, 954, 1008, 1095, 1299
SfaNI GCATC 3 cut(s) 714, 886, 904
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
SnaBI TACGTA 1 cut(s) 1267
Sse9I AATT 4 cut(s) 540, 803, 848, 1420
SseBI AGGCCT 2 cut(s) 215, 785
SsiI CCGC 4 cut(s) 165, 680, 755, 1453
SspMI CTAG 1 cut(s) 1154
SstI GAGCTC 3 cut(s) 246, 954, 1008
StuI AGGCCT 2 cut(s) 215, 785
StyD4I CCNGG 1 cut(s) 176
StyI CCWWGG 3 cut(s) 777, 1044, 1366
TaaI ACNGT 4 cut(s) 83, 202, 1147, 1390
TaiI ACGT 3 cut(s) 1106, 1269, 1420
TaqI TCGA 2 cut(s) 257, 1064
TasI AATT 4 cut(s) 540, 803, 848, 1420
TatI WGTACW 1 cut(s) 1381
TauI GCSGC 1 cut(s) 683
TfiI GAWTC 4 cut(s) 451, 885, 958, 1061
Tru1I TTAA 3 cut(s) 45, 105, 1200
Tru9I TTAA 3 cut(s) 45, 105, 1200
TseFI GTSAC 5 cut(s) 224, 589, 685, 736, 1186
TseI GCWGC 3 cut(s) 248, 411, 821
Tsp45I GTSAC 5 cut(s) 224, 589, 685, 736, 1186
TspDTI ATGAA 7 cut(s) 394, 492, 614, 690, 709, 950, 1060
TspGWI ACGGA 1 cut(s) 595
XapI RAATTY 2 cut(s) 803, 848
XcmI CCANNNNNNNNNTGG 2 cut(s) 123, 1051
XmiI GTMKAC 1 cut(s) 1469
XmnI GAANNNNTTC 1 cut(s) 33
XspI CTAG 1 cut(s) 1154
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.