AT5G13930

Belongs to the chalcone stilbene synthases family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
4488476 .. 4490264
1789 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G13930.1

Sequence Viewer

Length: 1188 bp
ATGGTGATGGCTGGTGCTTCTTCTTTGGATGAGATCAGACAGGCTCAGAGAGCTGATGGACCTGCAGGCATCTTGGCTATTGGCACTGCTAACCCTGAGAACCATGTGCTTCAGGCGGAGTATCCTGACTACTACTTCCGCATCACCAACAGTGAACACATGACCGACCTCAAGGAGAAGTTCAAGCGCATGTGCGACAAGTCGACAATTCGGAAACGTCACATGCATCTGACGGAGGAATTCCTCAAGGAAAACCCACACATGTGTGCTTACATGGCTCCTTCTCTGGACACCAGACAGGACATCGTGGTGGTCGAAGTCCCTAAGCTAGGCAAAGAAGCGGCAGTGAAGGCCATCAAGGAGTGGGGCCAGCCCAAGTCAAAGATCACTCATGTCGTCTTCTGCACTACCTCCGGCGTCGACATGCCTGGTGCTGACTACCAGCTCACCAAGCTTCTTGGTCTCCGTCCTTCCGTCAAGCGTCTCATGATGTACCAGCAAGGTTGCTTCGCCGGCGGTACTGTCCTCCGTATCGCTAAGGATCTCGCCGAGAACAATCGTGGAGCACGTGTCCTCGTTGTCTGCTCTGAGATCACAGCCGTTACCTTCCGTGGTCCCTCTGACACCCACCTTGACTCCCTCGTCGGTCAGGCTCTTTTCAGTGATGGCGCCGCCGCACTCATTGTGGGGTCGGACCCTGACACATCTGTCGGAGAGAAACCCATCTTTGAGATGGTGTCTGCCGCTCAGACCATCCTTCCAGACTCTGATGGTGCCATAGACGGACATTTGAGGGAAGTTGGTCTCACCTTCCATCTCCTCAAGGATGTTCCCGGCCTCATCTCCAAGAACATTGTGAAGAGTCTAGACGAAGCGTTTAAACCTTTGGGGATAAGTGACTGGAACTCCCTCTTCTGGATAGCCCACCCTGGAGGTCCAGCGATCCTAGACCAGGTGGAGATAAAGCTAGGACTAAAGGAAGAGAAGATGAGGGCGACACGTCACGTGTTGAGCGAGTATGGAAACATGTCGAGCGCGTGCGTTCTCTTCATACTAGACGAGATGAGGAGGAAGTCAGCTAAGGATGGTGTGGCCACGACAGGAGAAGGGTTGGAGTGGGGTGTCTTGTTTGGTTTCGGACCAGGTCTCACTGTTGAGACAGTCGTCTTGCACAGCGTTCCTCTCTAA

Protein Analysis

395

Amino Acids

43.12

Weight (kDa)

6.08

Isoelectric Point (pI)

32.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 10 - 233 3.2e-119 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 244 - 394 2.5e-71 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 307 - 389 9.6e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 641, 707
Acc36I ACCTGC 1 cut(s) 70
AccB1I GGYRCC 2 cut(s) 668, 773
AccBSI CCGCTC 1 cut(s) 746
AccI GTMKAC 2 cut(s) 203, 420
AccII CGCG 1 cut(s) 1037
AciI CCGC 7 cut(s) 116, 139, 341, 516, 672, 675, 744
AclWI GGATC 2 cut(s) 549, 937
AcoI YGGCCR 1 cut(s) 1092
AcsI RAATTY 1 cut(s) 239
AcuI CTGAAG 1 cut(s) 95
AcvI CACGTG 2 cut(s) 569, 1006
AcyI GRCGYC 2 cut(s) 417, 669
AfaI GTAC 2 cut(s) 494, 520
AfiI CCNNNNNNNGG 3 cut(s) 329, 915, 952
AflIII ACRYGT 5 cut(s) 261, 568, 998, 1005, 1026
AgsI TTSAA 1 cut(s) 184
AjiI CACGTC 1 cut(s) 1001
AjnI CCWGG 4 cut(s) 427, 928, 951, 1141
AleI CACNNNNGTG 2 cut(s) 262, 264
AluBI AGCT 6 cut(s) 53, 328, 445, 454, 967, 1079
AluI AGCT 6 cut(s) 53, 328, 445, 454, 967, 1079
Alw21I GWGCWC 1 cut(s) 568
Alw26I GTCTC 5 cut(s) 467, 488, 809, 1151, 1151
AlwI GGATC 2 cut(s) 549, 937
AlwNI CAGNNNCTG 1 cut(s) 767
AoxI GGCC 4 cut(s) 351, 367, 835, 1092
ApoI RAATTY 1 cut(s) 239
AspLEI GCGC 3 cut(s) 189, 671, 1037
AspS9I GGNCC 6 cut(s) 59, 367, 614, 694, 935, 1139
AsuC2I CCSGG 1 cut(s) 834
AsuHPI GGTGA 4 cut(s) 16, 136, 439, 799
AvaII GGWCC 5 cut(s) 59, 614, 694, 935, 1139
BalI TGGCCA 1 cut(s) 1094
BanI GGYRCC 2 cut(s) 668, 773
BbrPI CACGTG 2 cut(s) 569, 1006
BbsI GAAGAC 1 cut(s) 391
Bbv12I GWGCWC 1 cut(s) 568
BccI CCATC 9 cut(s) 50, 362, 659, 727, 731, 761, 764, 822, 1079
BceAI ACGGC 1 cut(s) 584
BciT130I CCWGG 4 cut(s) 429, 930, 953, 1143
BciVI GTATCC 1 cut(s) 132
BcnI CCSGG 1 cut(s) 834
BcoDI GTCTC 5 cut(s) 467, 488, 809, 1151, 1151
BfaI CTAG 5 cut(s) 329, 866, 947, 968, 1055
BfmI CTRYAG 1 cut(s) 63
BfoI RGCGCY 1 cut(s) 672
BfuAI ACCTGC 1 cut(s) 70
BfuI GTATCC 1 cut(s) 132
BisI GCNGC 4 cut(s) 342, 672, 675, 744
BlsI GCNGC 4 cut(s) 343, 673, 676, 745
Bme1390I CCNGG 5 cut(s) 429, 834, 930, 953, 1143
Bme18I GGWCC 5 cut(s) 59, 614, 694, 935, 1139
BmgBI CACGTC 1 cut(s) 1001
BmgT120I GGNCC 6 cut(s) 59, 367, 614, 694, 935, 1139
BmiI GGNNCC 6 cut(s) 279, 368, 616, 670, 696, 775
BmrFI CCNGG 5 cut(s) 429, 834, 930, 953, 1143
BmsI GCATC 3 cut(s) 78, 150, 235
BoxI GACNNNNGTC 1 cut(s) 1163
BpiI GAAGAC 1 cut(s) 391
BpmI CTGGAG 1 cut(s) 951
Bpu10I CCTNAGC 3 cut(s) 324, 537, 1080
BpuEI CTTGAG 3 cut(s) 155, 230, 806
BpuMI CCSGG 1 cut(s) 834
BsaAI YACGTR 2 cut(s) 569, 1006
BsaHI GRCGYC 2 cut(s) 417, 669
BsaI GGTCTC 3 cut(s) 467, 809, 1151
BsaJI CCNNGG 2 cut(s) 610, 928
BsaXI ACNNNNNCTCC 6 cut(s) 555, 585, 620, 650, 890, 920
Bsc4I CCNNNNNNNGG 3 cut(s) 329, 915, 952
Bse118I RCCGGY 1 cut(s) 512
Bse1I ACTGG 1 cut(s) 905
BseBI CCWGG 4 cut(s) 429, 930, 953, 1143
BseDI CCNNGG 2 cut(s) 610, 928
BseGI GGATG 4 cut(s) 34, 753, 832, 1090
BseLI CCNNNNNNNGG 3 cut(s) 329, 915, 952
BseMII CTCAG 4 cut(s) 59, 87, 579, 761
BseNI ACTGG 1 cut(s) 905
BseRI GAGGAG 2 cut(s) 809, 1081
BsgI GTGCAG 1 cut(s) 388
Bsh1236I CGCG 1 cut(s) 1037
BshFI GGCC 4 cut(s) 353, 369, 837, 1094
BshNI GGYRCC 2 cut(s) 668, 773
BsiHKAI GWGCWC 1 cut(s) 568
BsiSI CCGG 3 cut(s) 414, 513, 834
BslFI GGGAC 2 cut(s) 305, 600
BslI CCNNNNNNNGG 3 cut(s) 329, 915, 952
BsmAI GTCTC 5 cut(s) 467, 488, 809, 1151, 1151
BsmBI CGTCTC 1 cut(s) 488
BsmFI GGGAC 2 cut(s) 305, 600
BsnI GGCC 4 cut(s) 353, 369, 837, 1094
Bso31I GGTCTC 3 cut(s) 467, 809, 1151
Bsp1286I GDGCHC 1 cut(s) 568
Bsp143I GATC 5 cut(s) 33, 384, 541, 591, 942
BspACI CCGC 7 cut(s) 116, 139, 341, 516, 672, 675, 744
BspANI GGCC 4 cut(s) 353, 369, 837, 1094
BspCNI CTCAG 4 cut(s) 58, 88, 580, 760
BspFNI CGCG 1 cut(s) 1037
BspHI TCATGA 1 cut(s) 486
BspLI GGNNCC 6 cut(s) 279, 368, 616, 670, 696, 775
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 2 cut(s) 549, 937
BspT107I GGYRCC 2 cut(s) 668, 773
BspTNI GGTCTC 3 cut(s) 467, 809, 1151
BsrBI CCGCTC 1 cut(s) 746
BsrFI RCCGGY 1 cut(s) 512
BsrI ACTGG 1 cut(s) 905
BssAI RCCGGY 1 cut(s) 512
BssECI CCNNGG 2 cut(s) 610, 928
BssMI GATC 5 cut(s) 33, 384, 541, 591, 942
BssNI GRCGYC 2 cut(s) 417, 669
Bst2UI CCWGG 4 cut(s) 429, 930, 953, 1143
Bst4CI ACNGT 4 cut(s) 152, 523, 1153, 1162
Bst6I CTCTTC 4 cut(s) 854, 917, 975, 1052
BstACI GRCGYC 2 cut(s) 417, 669
BstBAI YACGTR 2 cut(s) 569, 1006
BstC8I GCNNGC 4 cut(s) 67, 371, 514, 1039
BstDEI CTNAG 7 cut(s) 45, 96, 324, 537, 588, 747, 1080
BstDSI CCRYGG 1 cut(s) 610
BstENI CCTNNNNNAGG 2 cut(s) 327, 950
BstF5I GGATG 4 cut(s) 34, 753, 832, 1090
BstFNI CGCG 1 cut(s) 1037
BstH2I RGCGCY 1 cut(s) 672
BstHHI GCGC 3 cut(s) 189, 671, 1037
BstKTI GATC 5 cut(s) 36, 387, 544, 594, 945
BstMAI GTCTC 5 cut(s) 467, 488, 809, 1151, 1151
BstMBI GATC 5 cut(s) 33, 384, 541, 591, 942
BstMWI GCNNNNNNNGC 5 cut(s) 50, 275, 350, 451, 513
BstNI CCWGG 4 cut(s) 429, 930, 953, 1143
BstNSI RCATGY 5 cut(s) 193, 226, 265, 427, 1030
BstPAI GACNNNNGTC 1 cut(s) 1163
BstSCI CCNGG 5 cut(s) 427, 832, 928, 951, 1141
BstSFI CTRYAG 1 cut(s) 63
BstUI CGCG 1 cut(s) 1037
BstV2I GAAGAC 1 cut(s) 391
BstX2I RGATCY 1 cut(s) 541
BstYI RGATCY 1 cut(s) 541
BsuI GTATCC 1 cut(s) 132
BsuRI GGCC 4 cut(s) 353, 369, 837, 1094
BtgI CCRYGG 1 cut(s) 610
BtrI CACGTC 1 cut(s) 1001
BtsCI GGATG 4 cut(s) 34, 753, 832, 1090
BtsI GCAGTG 2 cut(s) 84, 351
BtsIMutI CAGTG 5 cut(s) 84, 157, 351, 667, 1149
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 4 cut(s) 67, 371, 514, 1039
CaiI CAGNNNCTG 1 cut(s) 767
CciI TCATGA 1 cut(s) 486
CfoI GCGC 3 cut(s) 189, 671, 1037
Cfr10I RCCGGY 1 cut(s) 512
Cfr13I GGNCC 6 cut(s) 59, 367, 614, 694, 935, 1139
CseI GACGC 2 cut(s) 406, 470
CsiI ACCWGGT 2 cut(s) 951, 1141
Csp6I GTAC 2 cut(s) 493, 519
CviQI GTAC 2 cut(s) 493, 519
DdeI CTNAG 7 cut(s) 45, 96, 324, 537, 588, 747, 1080
DinI GGCGCC 1 cut(s) 670
DpnI GATC 5 cut(s) 35, 386, 543, 593, 944
DpnII GATC 5 cut(s) 33, 384, 541, 591, 942
DraI TTTAAA 1 cut(s) 880
DrdI GACNNNNNNGTC 2 cut(s) 641, 707
DseDI GACNNNNNNGTC 2 cut(s) 641, 707
EaeI YGGCCR 1 cut(s) 1092
Eam1104I CTCTTC 4 cut(s) 854, 917, 975, 1052
EarI CTCTTC 4 cut(s) 854, 917, 975, 1052
EciI GGCGGA 1 cut(s) 131
Eco31I GGTCTC 3 cut(s) 467, 809, 1151
Eco47I GGWCC 5 cut(s) 59, 614, 694, 935, 1139
Eco57I CTGAAG 1 cut(s) 95
Eco72I CACGTG 2 cut(s) 569, 1006
EcoNI CCTNNNNNAGG 2 cut(s) 327, 950
EcoRI GAATTC 1 cut(s) 239
EcoRII CCWGG 4 cut(s) 427, 928, 951, 1141
EcoT22I ATGCAT 1 cut(s) 228
EgeI GGCGCC 1 cut(s) 670
EheI GGCGCC 1 cut(s) 670
Esp3I CGTCTC 1 cut(s) 488
FaqI GGGAC 2 cut(s) 305, 600
FblI GTMKAC 2 cut(s) 203, 420
Fnu4HI GCNGC 4 cut(s) 342, 672, 675, 744
FokI GGATG 4 cut(s) 41, 740, 839, 1097
Fsp4HI GCNGC 4 cut(s) 342, 672, 675, 744
FspBI CTAG 5 cut(s) 329, 866, 947, 968, 1055
GlaI GCGC 3 cut(s) 188, 670, 1036
GluI GCNGC 4 cut(s) 342, 672, 675, 744
GsuI CTGGAG 1 cut(s) 951
HaeII RGCGCY 1 cut(s) 672
HaeIII GGCC 4 cut(s) 353, 369, 837, 1094
HapII CCGG 3 cut(s) 414, 513, 834
HgaI GACGC 2 cut(s) 406, 470
HhaI GCGC 3 cut(s) 189, 671, 1037
Hin1I GRCGYC 2 cut(s) 417, 669
Hin6I GCGC 3 cut(s) 187, 669, 1035
HinP1I GCGC 3 cut(s) 187, 669, 1035
HincII GTYRAC 2 cut(s) 204, 421
HindII GTYRAC 2 cut(s) 204, 421
HindIII AAGCTT 1 cut(s) 452
HinfI GANTC 3 cut(s) 635, 764, 862
HpaII CCGG 3 cut(s) 414, 513, 834
HphI GGTGA 4 cut(s) 16, 136, 439, 799
Hpy166II GTNNAC 3 cut(s) 155, 204, 421
Hpy188III TCNNGA 6 cut(s) 125, 287, 487, 761, 866, 916
Hpy8I GTNNAC 3 cut(s) 155, 204, 421
Hpy99I CGWCG 2 cut(s) 422, 647
HpyAV CCTTC 7 cut(s) 291, 343, 480, 616, 767, 820, 1100
HpyCH4III ACNGT 4 cut(s) 152, 523, 1153, 1162
HpyCH4IV ACGT 4 cut(s) 217, 568, 1000, 1005
HpyCH4V TGCA 4 cut(s) 65, 226, 405, 1171
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 275, 350, 451, 513
HpyF3I CTNAG 7 cut(s) 45, 96, 324, 537, 588, 747, 1080
HpySE526I ACGT 4 cut(s) 217, 568, 1000, 1005
Hsp92I GRCGYC 2 cut(s) 417, 669
HspAI GCGC 3 cut(s) 187, 669, 1035
KasI GGCGCC 1 cut(s) 668
KroI GCCGGC 1 cut(s) 512
KroNI GCCGGC 1 cut(s) 514
Kzo9I GATC 5 cut(s) 33, 384, 541, 591, 942
LmnI GCTCC 2 cut(s) 283, 563
LweI GCATC 3 cut(s) 78, 150, 235
MabI ACCWGGT 2 cut(s) 951, 1141
MaeI CTAG 5 cut(s) 329, 866, 947, 968, 1055
MaeII ACGT 4 cut(s) 217, 568, 1000, 1005
MaeIII GTNAC 4 cut(s) 218, 601, 896, 1001
MalI GATC 5 cut(s) 35, 386, 543, 593, 944
MbiI CCGCTC 1 cut(s) 746
MboI GATC 5 cut(s) 33, 384, 541, 591, 942
MboII GAAGA 7 cut(s) 12, 391, 871, 904, 992, 997, 1039
MflI RGATCY 1 cut(s) 541
MhlI GDGCHC 1 cut(s) 568
MlsI TGGCCA 1 cut(s) 1094
MluCI AATT 2 cut(s) 207, 239
MluNI TGGCCA 1 cut(s) 1094
Mly113I GGCGCC 1 cut(s) 669
MlyI GAGTC 3 cut(s) 629, 758, 871
MmeI TCCRAC 3 cut(s) 672, 691, 1092
Mox20I TGGCCA 1 cut(s) 1094
Mph1103I ATGCAT 1 cut(s) 228
MreI CGCCGGCG 1 cut(s) 512
MroNI GCCGGC 1 cut(s) 512
MscI TGGCCA 1 cut(s) 1094
MseI TTAA 1 cut(s) 879
MslI CAYNNNNRTG 3 cut(s) 262, 264, 308
Msp20I TGGCCA 1 cut(s) 1094
MspI CCGG 3 cut(s) 414, 513, 834
MspR9I CCNGG 5 cut(s) 429, 834, 930, 953, 1143
MssI GTTTAAAC 1 cut(s) 880
MvaI CCWGG 4 cut(s) 429, 930, 953, 1143
MvnI CGCG 1 cut(s) 1037
MwoI GCNNNNNNNGC 5 cut(s) 50, 275, 350, 451, 513
NaeI GCCGGC 1 cut(s) 514
NarI GGCGCC 1 cut(s) 669
NciI CCSGG 1 cut(s) 834
NdeII GATC 5 cut(s) 33, 384, 541, 591, 942
NgoMIV GCCGGC 1 cut(s) 512
NlaIV GGNNCC 6 cut(s) 279, 368, 616, 670, 696, 775
NmeAIII GCCGAG 1 cut(s) 574
NmuCI GTSAC 3 cut(s) 218, 896, 1001
NsiI ATGCAT 1 cut(s) 228
NspI RCATGY 5 cut(s) 193, 226, 265, 427, 1030
OliI CACNNNNGTG 2 cut(s) 262, 264
PagI TCATGA 1 cut(s) 486
PciI ACATGT 2 cut(s) 261, 1026
PcsI WCGNNNNNNNCGW 3 cut(s) 312, 565, 1011
PdiI GCCGGC 1 cut(s) 514
PflFI GACNNNGTC 1 cut(s) 1143
PkrI GCNGC 4 cut(s) 343, 673, 676, 745
PleI GAGTC 3 cut(s) 629, 758, 870
PluTI GGCGCC 1 cut(s) 672
PmaCI CACGTG 2 cut(s) 569, 1006
PmeI GTTTAAAC 1 cut(s) 880
PmlI CACGTG 2 cut(s) 569, 1006
PpsI GAGTC 3 cut(s) 629, 758, 870
Ppu21I YACGTR 2 cut(s) 569, 1006
PscI ACATGT 2 cut(s) 261, 1026
PshAI GACNNNNGTC 1 cut(s) 1163
Psp6I CCWGG 4 cut(s) 427, 928, 951, 1141
PspCI CACGTG 2 cut(s) 569, 1006
PspGI CCWGG 4 cut(s) 427, 928, 951, 1141
PspN4I GGNNCC 6 cut(s) 279, 368, 616, 670, 696, 775
PspPI GGNCC 6 cut(s) 59, 367, 614, 694, 935, 1139
PstI CTGCAG 1 cut(s) 67
PstNI CAGNNNCTG 1 cut(s) 767
PsuI RGATCY 1 cut(s) 541
PsyI GACNNNGTC 1 cut(s) 1143
RsaI GTAC 2 cut(s) 494, 520
RsaNI GTAC 2 cut(s) 493, 519
RseI CAYNNNNRTG 3 cut(s) 262, 264, 308
SalI GTCGAC 2 cut(s) 202, 419
SaqAI TTAA 1 cut(s) 879
SatI GCNGC 4 cut(s) 342, 672, 675, 744
Sau3AI GATC 5 cut(s) 33, 384, 541, 591, 942
Sau96I GGNCC 6 cut(s) 59, 367, 614, 694, 935, 1139
SbfI CCTGCAGG 1 cut(s) 67
SchI GAGTC 3 cut(s) 629, 758, 871
ScrFI CCNGG 5 cut(s) 429, 834, 930, 953, 1143
SdaI CCTGCAGG 1 cut(s) 67
SduI GDGCHC 1 cut(s) 568
SexAI ACCWGGT 2 cut(s) 951, 1141
SfaNI GCATC 3 cut(s) 78, 150, 235
SfcI CTRYAG 1 cut(s) 63
SfoI GGCGCC 1 cut(s) 670
SgrAI CRCCGGYG 1 cut(s) 512
SinI GGWCC 5 cut(s) 59, 614, 694, 935, 1139
SmiMI CAYNNNNRTG 3 cut(s) 262, 264, 308
SmlI CTYRAG 3 cut(s) 170, 245, 821
SmoI CTYRAG 3 cut(s) 170, 245, 821
Sse8387I CCTGCAGG 1 cut(s) 67
Sse9I AATT 2 cut(s) 207, 239
SsiI CCGC 7 cut(s) 116, 139, 341, 516, 672, 675, 744
SspDI GGCGCC 1 cut(s) 668
SspMI CTAG 5 cut(s) 329, 866, 947, 968, 1055
StyD4I CCNGG 5 cut(s) 427, 832, 928, 951, 1141
TaaI ACNGT 4 cut(s) 152, 523, 1153, 1162
TaiI ACGT 4 cut(s) 220, 571, 1003, 1008
TaqI TCGA 4 cut(s) 203, 315, 420, 1031
TaqII GACCGA 2 cut(s) 179, 635
TasI AATT 2 cut(s) 207, 239
TauI GCSGC 4 cut(s) 344, 674, 677, 746
Tru1I TTAA 1 cut(s) 879
Tru9I TTAA 1 cut(s) 879
TscAI CASTG 5 cut(s) 91, 157, 351, 667, 1156
TseFI GTSAC 3 cut(s) 218, 896, 1001
Tsp45I GTSAC 3 cut(s) 218, 896, 1001
TspDTI ATGAA 1 cut(s) 1039
TspGWI ACGGA 6 cut(s) 248, 455, 463, 518, 599, 798
TspRI CASTG 5 cut(s) 91, 157, 351, 667, 1156
Tth111I GACNNNGTC 1 cut(s) 1143
VpaK11BI GGWCC 5 cut(s) 59, 614, 694, 935, 1139
XagI CCTNNNNNAGG 2 cut(s) 327, 950
XapI RAATTY 1 cut(s) 239
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 5 cut(s) 193, 226, 265, 427, 1030
XcmI CCANNNNNNNNNTGG 1 cut(s) 730
XmiI GTMKAC 2 cut(s) 203, 420
XspI CTAG 5 cut(s) 329, 866, 947, 968, 1055
Zsp2I ATGCAT 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.