pycom04g00350

Belongs to the chalcone stilbene synthases family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
355964 .. 357998
2035 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g00350.1

Sequence Viewer

Length: 1170 bp
ATGGTGACCGTCGAGGAAGTTCGCAAGGCTCAGAGGGCTGAGGGTCCGGCTACAATCTTAGCTATTGGGACTGCAACTCCTCCCAATTGTGTAGACCAGGCCACATACCCCGACTACTACTTTCGTATCACCAACAGCGAGCACAAGACTGAGCTCAAAGAAAAATTCCAACGCATGTGTGACAAATCTATGATCGAGAAGCGTTACATGTACTTGACTGAAGAAATTCTGAAAGAAAACCCGACTGTGTGCGAGTACATGGCTCCCTCACTCGATGCTCGGCAGGACATGGTTGTTGTTGAAGTCCCAAGGCTTGGCAAAGAAGCGGCCACCAAGGCAATTAAGGAATGGGGACAGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGCACCACCAGCGGTGTTGACATGCCCGGTGCCGACTACCAGCTCACCAAGCTATTGGGCCTCCGCCCCTCCGTCAAGCGCCTCATGATGTACCAACAAGGCTGTTTTGCTGGAGGCACGGTCCTCCGTTTGGCCAAAGACTTGGCCGAAAACAACAAGGGTGCACGTGTTCTTGTTGTGTGCTCTGAGATCACCGCGGTCACCTTCCGGGGGCCTAGTGACACCCACCTTGATAGTCTTGTAGGCCAAGCTTTGTTTGGCGACGGTGCAGCTGCCGTCATCATTGGTGCGGATCCATTGCCCGAAGTTGAGAAGCCCTTATTTGAGCTGGTGTCTGCGGCCCAAACTATCCTCCCCGACAGTGATGGGGCTATTGACGGGCATCTTCGTGAAGTGGGGCTTACATTTCACCTTCTCAAGGATGTTCCCGGGCTTATTTCGAAGAACATCGAAAAGAGCCTTAACGAGGCCTTCAAGCCAATAGGCATCTCGGACTGGAACTCGCTCTTTTGGATTGCACACCCAGGTGGCCCTGCTATTCTGGACCAAGTAGAGTCCAAGTTGGCACTTAAGCCGGAGAAACTAGAAGCAACAAGGCAAGTGCTGTCTGATTACGGCAACATGTCGAGTGCGTGTGTCTTGTTTATTTTGGACGAGGTGAGGAGGAAGTCTGCTGAGAAAGGACTCAGAACAACTGGGGAAGGACTGGAGTGGGGCGTGCTCTTCGGATTTGGGCCTGGCCTCACTGTCGAGACCGTTGTGCTTCACAGTGTGGCTGCTTGA

Protein Analysis

390

Amino Acids

42.52

Weight (kDa)

5.65

Isoelectric Point (pI)

35.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 3.4e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 238 - 387 2.3e-72 Chalcone and stilbene synthases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 416
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 93
AccII CGCG 1 cut(s) 584
AciI CCGC 7 cut(s) 326, 399, 451, 582, 584, 677, 725
AclWI GGATC 2 cut(s) 674, 687
AcoI YGGCCR 3 cut(s) 327, 519, 531
AcsI RAATTY 2 cut(s) 164, 225
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 554
AdeI CACNNNGTG 1 cut(s) 1159
AfaI GTAC 3 cut(s) 212, 257, 479
AfiI CCNNNNNNNGG 5 cut(s) 314, 517, 597, 805, 853
AflII CTTAAG 1 cut(s) 956
AflIII ACRYGT 3 cut(s) 207, 553, 1008
AgsI TTSAA 2 cut(s) 302, 862
AjnI CCWGG 3 cut(s) 96, 910, 1123
AleI CACNNNNGTG 1 cut(s) 912
AluBI AGCT 7 cut(s) 62, 154, 430, 439, 638, 659, 715
AluI AGCT 7 cut(s) 62, 154, 430, 439, 638, 659, 715
Alw21I GWGCWC 5 cut(s) 144, 156, 553, 572, 1110
Alw26I GTCTC 1 cut(s) 1133
Alw44I GTGCAC 1 cut(s) 549
AlwI GGATC 2 cut(s) 674, 687
Ama87I CYCGRG 1 cut(s) 815
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 3 cut(s) 656, 659, 1163
ApoI RAATTY 2 cut(s) 164, 225
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 1 cut(s) 468
AspS9I GGNCC 8 cut(s) 44, 445, 508, 599, 727, 917, 931, 1121
AsuC2I CCSGG 4 cut(s) 414, 596, 816, 817
AsuHPI GGTGA 8 cut(s) 16, 121, 364, 424, 571, 580, 788, 1057
AsuII TTCGAA 1 cut(s) 827
AvaI CYCGRG 1 cut(s) 815
AvaII GGWCC 3 cut(s) 44, 508, 931
BaeGI GKGCMC 1 cut(s) 553
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BalI TGGCCA 1 cut(s) 521
BamHI GGATCC 1 cut(s) 679
BanI GGYRCC 1 cut(s) 416
BanII GRGCYC 1 cut(s) 156
BbrPI CACGTG 1 cut(s) 554
Bbv12I GWGCWC 5 cut(s) 144, 156, 553, 572, 1110
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 646, 668, 1150
BccI CCATC 1 cut(s) 746
BceAI ACGGC 2 cut(s) 647, 1018
BciT130I CCWGG 3 cut(s) 98, 912, 1125
BcnI CCSGG 4 cut(s) 414, 596, 816, 817
BcoDI GTCTC 1 cut(s) 1133
BfaI CTAG 2 cut(s) 603, 971
BfoI RGCGCY 1 cut(s) 469
BfrI CTTAAG 1 cut(s) 956
BglI GCCNNNNNGGC 1 cut(s) 335
BisI GCNGC 5 cut(s) 327, 657, 660, 726, 1164
BlsI GCNGC 5 cut(s) 328, 658, 661, 727, 1165
Bme1390I CCNGG 7 cut(s) 98, 414, 596, 816, 817, 912, 1125
Bme18I GGWCC 3 cut(s) 44, 508, 931
BmeT110I CYCGRG 1 cut(s) 815
BmgT120I GGNCC 8 cut(s) 44, 445, 508, 599, 727, 917, 931, 1121
BmiI GGNNCC 5 cut(s) 45, 264, 418, 600, 681
BmrFI CCNGG 7 cut(s) 98, 414, 596, 816, 817, 912, 1125
BmrI ACTGGG 1 cut(s) 1092
BmsI GCATC 3 cut(s) 265, 778, 882
BmuI ACTGGG 1 cut(s) 1092
BpmI CTGGAG 2 cut(s) 519, 1115
Bpu10I CCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 1 cut(s) 788
BpuMI CCSGG 4 cut(s) 414, 596, 816, 817
BsaAI YACGTR 1 cut(s) 554
BsaI GGTCTC 1 cut(s) 1133
BsaJI CCNNGG 6 cut(s) 308, 333, 582, 595, 815, 910
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 517, 597, 805, 853
Bse1I ACTGG 3 cut(s) 887, 1087, 1098
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 3 cut(s) 98, 912, 1125
BseDI CCNNGG 6 cut(s) 308, 333, 582, 595, 815, 910
BseGI GGATG 1 cut(s) 814
BseLI CCNNNNNNNGG 5 cut(s) 314, 517, 597, 805, 853
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 6 cut(s) 30, 44, 141, 564, 1053, 1087
BseNI ACTGG 3 cut(s) 887, 1087, 1098
BseRI GAGGAG 2 cut(s) 69, 1063
BseSI GKGCMC 1 cut(s) 553
BseXI GCAGC 3 cut(s) 646, 668, 1150
BsgI GTGCAG 1 cut(s) 675
Bsh1236I CGCG 1 cut(s) 584
BshNI GGYRCC 1 cut(s) 416
BsiHKAI GWGCWC 5 cut(s) 144, 156, 553, 572, 1110
BsiHKCI CYCGRG 1 cut(s) 815
BsiSI CCGG 5 cut(s) 47, 414, 595, 816, 962
BslFI GGGAC 3 cut(s) 82, 290, 366
BslI CCNNNNNNNGG 5 cut(s) 314, 517, 597, 805, 853
BsmAI GTCTC 1 cut(s) 1133
BsmFI GGGAC 3 cut(s) 82, 290, 366
Bso31I GGTCTC 1 cut(s) 1133
BsoBI CYCGRG 1 cut(s) 815
Bsp119I TTCGAA 1 cut(s) 827
Bsp1286I GDGCHC 5 cut(s) 144, 156, 553, 572, 1110
Bsp143I GATC 3 cut(s) 192, 576, 679
BspACI CCGC 7 cut(s) 326, 399, 451, 582, 584, 677, 725
BspCNI CTCAG 6 cut(s) 31, 43, 142, 565, 1054, 1086
BspFNI CGCG 1 cut(s) 584
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 5 cut(s) 45, 264, 418, 600, 681
BspPI GGATC 2 cut(s) 674, 687
BspQI GCTCTTC 1 cut(s) 1115
BspT104I TTCGAA 1 cut(s) 827
BspT107I GGYRCC 1 cut(s) 416
BspTI CTTAAG 1 cut(s) 956
BspTNI GGTCTC 1 cut(s) 1133
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 3 cut(s) 887, 1087, 1098
BssECI CCNNGG 6 cut(s) 308, 333, 582, 595, 815, 910
BssMI GATC 3 cut(s) 192, 576, 679
BssT1I CCWWGG 2 cut(s) 308, 333
Bst2UI CCWGG 3 cut(s) 98, 912, 1125
Bst4CI ACNGT 8 cut(s) 10, 247, 508, 653, 749, 1135, 1144, 1157
Bst6I CTCTTC 1 cut(s) 1115
BstAFI CTTAAG 1 cut(s) 956
BstBAI YACGTR 1 cut(s) 554
BstBI TTCGAA 1 cut(s) 827
BstC8I GCNNGC 2 cut(s) 140, 1106
BstDEI CTNAG 7 cut(s) 30, 39, 58, 150, 573, 1062, 1073
BstDSI CCRYGG 1 cut(s) 582
BstEII GGTNACC 2 cut(s) 4, 586
BstENI CCTNNNNNAGG 2 cut(s) 803, 851
BstF5I GGATG 1 cut(s) 814
BstFNI CGCG 1 cut(s) 584
BstH2I RGCGCY 1 cut(s) 469
BstHHI GCGC 1 cut(s) 468
BstKTI GATC 3 cut(s) 195, 579, 682
BstMAI GTCTC 1 cut(s) 1133
BstMBI GATC 3 cut(s) 192, 576, 679
BstMWI GCNNNNNNNGC 4 cut(s) 35, 335, 396, 436
BstNI CCWGG 3 cut(s) 98, 912, 1125
BstNSI RCATGY 4 cut(s) 178, 211, 412, 1012
BstPI GGTNACC 2 cut(s) 4, 586
BstSCI CCNGG 7 cut(s) 96, 412, 594, 814, 815, 910, 1123
BstSLI GKGCMC 1 cut(s) 553
BstUI CGCG 1 cut(s) 584
BstV1I GCAGC 3 cut(s) 646, 668, 1150
BstX2I RGATCY 1 cut(s) 679
BstXI CCANNNNNNTGG 2 cut(s) 442, 529
BstYI RGATCY 1 cut(s) 679
BtgI CCRYGG 1 cut(s) 582
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 3 cut(s) 754, 1131, 1162
Cac8I GCNNGC 2 cut(s) 140, 1106
CciI TCATGA 1 cut(s) 471
CfoI GCGC 1 cut(s) 468
Cfr13I GGNCC 8 cut(s) 44, 445, 508, 599, 727, 917, 931, 1121
Cfr42I CCGCGG 1 cut(s) 585
Cfr9I CCCGGG 1 cut(s) 815
Csp6I GTAC 3 cut(s) 211, 256, 478
CviAII CATG 7 cut(s) 175, 208, 259, 289, 409, 472, 1009
CviQI GTAC 3 cut(s) 211, 256, 478
DdeI CTNAG 7 cut(s) 30, 39, 58, 150, 573, 1062, 1073
DpnI GATC 3 cut(s) 194, 578, 681
DpnII GATC 3 cut(s) 192, 576, 679
DraIII CACNNNGTG 1 cut(s) 1159
EaeI YGGCCR 3 cut(s) 327, 519, 531
Eam1104I CTCTTC 1 cut(s) 1115
EarI CTCTTC 1 cut(s) 1115
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 2 cut(s) 308, 333
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 1 cut(s) 156
Eco31I GGTCTC 1 cut(s) 1133
Eco47I GGWCC 3 cut(s) 44, 508, 931
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 554
Eco88I CYCGRG 1 cut(s) 815
Eco91I GGTNACC 2 cut(s) 4, 586
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 2 cut(s) 803, 851
EcoO109I RGGNCCY 1 cut(s) 599
EcoO65I GGTNACC 2 cut(s) 4, 586
EcoRII CCWGG 3 cut(s) 96, 910, 1123
EcoT14I CCWWGG 2 cut(s) 308, 333
EcoT38I GRGCYC 1 cut(s) 156
ErhI CCWWGG 2 cut(s) 308, 333
FaeI CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
FaiI YATR 9 cut(s) 106, 176, 191, 209, 260, 290, 410, 473, 1010
FalI AAGNNNNNCTT 2 cut(s) 771, 803
FaqI GGGAC 3 cut(s) 82, 290, 366
FatI CATG 7 cut(s) 174, 207, 258, 288, 408, 471, 1008
FblI GTMKAC 1 cut(s) 93
Fnu4HI GCNGC 5 cut(s) 327, 657, 660, 726, 1164
FokI GGATG 1 cut(s) 821
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 5 cut(s) 327, 657, 660, 726, 1164
FspBI CTAG 2 cut(s) 603, 971
GlaI GCGC 1 cut(s) 467
GluI GCNGC 5 cut(s) 327, 657, 660, 726, 1164
GsuI CTGGAG 2 cut(s) 519, 1115
HaeII RGCGCY 1 cut(s) 469
HapII CCGG 5 cut(s) 47, 414, 595, 816, 962
HhaI GCGC 1 cut(s) 468
Hin1II CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
Hin6I GCGC 1 cut(s) 466
HinP1I GCGC 1 cut(s) 466
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 636
HinfI GANTC 2 cut(s) 941, 1071
HpaII CCGG 5 cut(s) 47, 414, 595, 816, 962
HphI GGTGA 8 cut(s) 16, 121, 364, 424, 571, 580, 788, 1057
Hpy166II GTNNAC 3 cut(s) 94, 406, 551
Hpy188I TCNGA 7 cut(s) 33, 231, 574, 880, 997, 1076, 1115
Hpy188III TCNNGA 5 cut(s) 196, 472, 776, 929, 1138
Hpy8I GTNNAC 3 cut(s) 94, 406, 551
Hpy99I CGWCG 2 cut(s) 14, 653
HpyAV CCTTC 4 cut(s) 601, 809, 868, 1082
HpyCH4III ACNGT 8 cut(s) 10, 247, 508, 653, 749, 1135, 1144, 1157
HpyCH4IV ACGT 1 cut(s) 553
HpyCH4V TGCA 5 cut(s) 74, 390, 551, 656, 905
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 335, 396, 436
HpyF3I CTNAG 7 cut(s) 30, 39, 58, 150, 573, 1062, 1073
HpySE526I ACGT 1 cut(s) 553
Hsp92II CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
HspAI GCGC 1 cut(s) 466
KspI CCGCGG 1 cut(s) 585
Kzo9I GATC 3 cut(s) 192, 576, 679
LguI GCTCTTC 1 cut(s) 1115
LmnI GCTCC 1 cut(s) 268
Lsp1109I GCAGC 3 cut(s) 646, 668, 1150
LweI GCATC 3 cut(s) 265, 778, 882
MaeI CTAG 2 cut(s) 603, 971
MaeII ACGT 1 cut(s) 553
MaeIII GTNAC 5 cut(s) 4, 179, 203, 586, 605
MalI GATC 3 cut(s) 194, 578, 681
MboI GATC 3 cut(s) 192, 576, 679
MboII GAAGA 4 cut(s) 233, 764, 841, 1102
MfeI CAATTG 1 cut(s) 85
MflI RGATCY 1 cut(s) 679
MhlI GDGCHC 5 cut(s) 144, 156, 553, 572, 1110
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 4 cut(s) 85, 164, 225, 339
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 2 cut(s) 950, 1065
MmeI TCCRAC 1 cut(s) 193
Mox20I TGGCCA 1 cut(s) 521
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 521
MseI TTAA 3 cut(s) 342, 849, 957
MslI CAYNNNNRTG 2 cut(s) 774, 912
Msp20I TGGCCA 1 cut(s) 521
MspA1I CMGCKG 3 cut(s) 399, 584, 659
MspCI CTTAAG 1 cut(s) 956
MspI CCGG 5 cut(s) 47, 414, 595, 816, 962
MspR9I CCNGG 7 cut(s) 98, 414, 596, 816, 817, 912, 1125
MunI CAATTG 1 cut(s) 85
MvaI CCWGG 3 cut(s) 98, 912, 1125
MvnI CGCG 1 cut(s) 584
MwoI GCNNNNNNNGC 4 cut(s) 35, 335, 396, 436
NciI CCSGG 4 cut(s) 414, 596, 816, 817
NdeII GATC 3 cut(s) 192, 576, 679
NlaIII CATG 7 cut(s) 178, 211, 262, 292, 412, 475, 1012
NlaIV GGNNCC 5 cut(s) 45, 264, 418, 600, 681
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 4 cut(s) 4, 179, 586, 605
NspI RCATGY 4 cut(s) 178, 211, 412, 1012
NspV TTCGAA 1 cut(s) 827
OliI CACNNNNGTG 1 cut(s) 912
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 1 cut(s) 857
PciI ACATGT 2 cut(s) 207, 1008
PciSI GCTCTTC 1 cut(s) 1115
PdmI GAANNNNTTC 1 cut(s) 225
PflMI CCANNNNNTGG 1 cut(s) 314
PkrI GCNGC 5 cut(s) 328, 658, 661, 727, 1165
PleI GAGTC 2 cut(s) 949, 1065
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
PpsI GAGTC 2 cut(s) 949, 1065
Ppu21I YACGTR 1 cut(s) 554
PscI ACATGT 2 cut(s) 207, 1008
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 3 cut(s) 96, 910, 1123
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 2 cut(s) 4, 586
PspGI CCWGG 3 cut(s) 96, 910, 1123
PspN4I GGNNCC 5 cut(s) 45, 264, 418, 600, 681
PspPI GGNCC 8 cut(s) 44, 445, 508, 599, 727, 917, 931, 1121
PsuI RGATCY 1 cut(s) 679
PvuII CAGCTG 1 cut(s) 659
RsaI GTAC 3 cut(s) 212, 257, 479
RsaNI GTAC 3 cut(s) 211, 256, 478
RseI CAYNNNNRTG 2 cut(s) 774, 912
SacI GAGCTC 1 cut(s) 156
SacII CCGCGG 1 cut(s) 585
SapI GCTCTTC 1 cut(s) 1115
SaqAI TTAA 3 cut(s) 342, 849, 957
SatI GCNGC 5 cut(s) 327, 657, 660, 726, 1164
Sau3AI GATC 3 cut(s) 192, 576, 679
Sau96I GGNCC 8 cut(s) 44, 445, 508, 599, 727, 917, 931, 1121
SchI GAGTC 2 cut(s) 950, 1065
ScrFI CCNGG 7 cut(s) 98, 414, 596, 816, 817, 912, 1125
SduI GDGCHC 5 cut(s) 144, 156, 553, 572, 1110
SfaNI GCATC 3 cut(s) 265, 778, 882
Sfr303I CCGCGG 1 cut(s) 585
SfuI TTCGAA 1 cut(s) 827
SgrBI CCGCGG 1 cut(s) 585
SinI GGWCC 3 cut(s) 44, 508, 931
SmaI CCCGGG 1 cut(s) 817
SmiMI CAYNNNNRTG 2 cut(s) 774, 912
SmlI CTYRAG 2 cut(s) 803, 956
SmoI CTYRAG 2 cut(s) 803, 956
Sse9I AATT 4 cut(s) 85, 164, 225, 339
SseBI AGGCCT 1 cut(s) 857
SsiI CCGC 7 cut(s) 326, 399, 451, 582, 584, 677, 725
SspMI CTAG 2 cut(s) 603, 971
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 7 cut(s) 96, 412, 594, 814, 815, 910, 1123
StyI CCWWGG 2 cut(s) 308, 333
TaaI ACNGT 8 cut(s) 10, 247, 508, 653, 749, 1135, 1144, 1157
TaiI ACGT 1 cut(s) 556
TaqI TCGA 7 cut(s) 12, 195, 273, 827, 837, 1013, 1137
TasI AATT 4 cut(s) 85, 164, 225, 339
TatI WGTACW 2 cut(s) 210, 255
TauI GCSGC 2 cut(s) 329, 728
Tru1I TTAA 3 cut(s) 342, 849, 957
Tru9I TTAA 3 cut(s) 342, 849, 957
TscAI CASTG 3 cut(s) 754, 1138, 1162
TseFI GTSAC 4 cut(s) 4, 179, 586, 605
TseI GCWGC 3 cut(s) 656, 659, 1163
Tsp45I GTSAC 4 cut(s) 4, 179, 586, 605
TspGWI ACGGA 2 cut(s) 448, 503
TspMI CCCGGG 1 cut(s) 815
TspRI CASTG 3 cut(s) 754, 1138, 1162
Van91I CCANNNNNTGG 1 cut(s) 314
Vha464I CTTAAG 1 cut(s) 956
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 3 cut(s) 44, 508, 931
XagI CCTNNNNNAGG 2 cut(s) 803, 851
XapI RAATTY 2 cut(s) 164, 225
XceI RCATGY 4 cut(s) 178, 211, 412, 1012
XcmI CCANNNNNNNNNTGG 1 cut(s) 641
XmaI CCCGGG 1 cut(s) 815
XmiI GTMKAC 1 cut(s) 93
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 2 cut(s) 603, 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.