Rw0G010230

Belongs to the chalcone stilbene synthases family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00424
OG0000409
Physical Location & Seq
Reverse (-)
17008 .. 18383
1376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G010230.1

Sequence Viewer

Length: 1170 bp
ATGGTGACCGTCGAGGAAGTCCGCAAGGCTCAACGTGCTGAGGGTCCGGCCACCGTCTTGGCCATCGGGACAGCCACTCCACCGAACTGTATTGACCAGAGCACATACCCCGACTACTACTTCCGTATCACCAACAGCGAGCACAAGGCTGAGCTCAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGTTATATGTATTTGACTGAAGAAATTCTCAAAGAGAATCCCAGCATGTGTGAGTACATGGCCCCTTCACTTGATGCAAGACAAGACATGGTGGTGGTTGAAATTCCAAAGCTTGGGAAAGAGGCAGCTACCAAGGCCATTAAGGAATGGGGTCAGCCCAAGTCTAAAATCACCCACTTGGTATTTTGTACTACTAGTGGTGTCGACATGCCCGGGGCTGATTACCAGCTCACTAAGCTCTTGGGCCTCCGCCCGTCCGTCAAGCGTCTCATGATGTACCAGCAAGGGTGTTTTGCCGGAGGCACGGTGCTCCGGTTGGCCAAGGACTTGGCCGAGAACAACAAAGGTGCACGCGTTCTTGTTGTTTGCTCAGAGATCACTGCCGTGACTTTCCGTGGGCCTAGCGACACTCATCTCGATAGTCTTGTGGGCCAAGCCTTGTTCGGTGATGGTGCTGCGGCGATTATTGTTGGGTCCGACCCATTGCCCGAGGTTGAGAAGCCTTTGTTCGAGTTGGTCTCGGCAGCCCAAACTATCCTTCCTGACAGTGACGGAGCCATCGACGGGCATCTTCGTGAAGTTGGGCTCACATTTCACCTCCTCAAAGATGTTCCTGGGCTGATTTCTAAGAACATCGAGAAGAGCCTCAACGAGGCCTTCAAACCTTTGAATATCATGGACTGGAACTCACTATTCTGGATTGCACACCCGGGTGGCCCTGCAATTTTGGACCAAGTAGAGGCTAAATTGGGCCTGAAACCCGAAAAGTTAGAAGCCACAAGGCATATATTATCCGAGTATGGCAACATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGGAAGTCTGCAGCTAAAGGGCACAAGACCACTGGAGAAGGGCTAGAGTGGGGTGTTCTATTTGGGTTTGGGCCTGGGCTCACCGTCGAGACCGTCGTGCTTCACAGTGTGGCTGCTTAA

Protein Analysis

389

Amino Acids

42.57

Weight (kDa)

6.18

Isoelectric Point (pI)

38.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 8.9e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 238 - 387 6.1e-71 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 301 - 384 1.5e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 405
AccII CGCG 1 cut(s) 555
AciI CCGC 3 cut(s) 22, 451, 659
AcoI YGGCCR 4 cut(s) 48, 60, 519, 531
AcsI RAATTY 3 cut(s) 164, 225, 303
AcuI CTGAAG 1 cut(s) 240
AdeI CACNNNGTG 1 cut(s) 1159
AfaI GTAC 3 cut(s) 257, 391, 479
AfiI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
AflIII ACRYGT 2 cut(s) 553, 1008
AgsI TTSAA 3 cut(s) 302, 862, 871
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 2 cut(s) 814, 1123
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AleI CACNNNNGTG 2 cut(s) 584, 912
AluBI AGCT 6 cut(s) 154, 313, 329, 430, 439, 1064
AluI AGCT 6 cut(s) 154, 313, 329, 430, 439, 1064
Alw21I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
Alw26I GTCTC 3 cut(s) 473, 724, 1133
Alw44I GTGCAC 1 cut(s) 549
Ama87I CYCGRG 3 cut(s) 413, 689, 910
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
ApoI RAATTY 3 cut(s) 164, 225, 303
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 1 cut(s) 174
AsuC2I CCSGG 4 cut(s) 414, 415, 911, 912
AsuHPI GGTGA 7 cut(s) 16, 121, 364, 659, 788, 1057, 1123
AvaI CYCGRG 3 cut(s) 413, 689, 910
AvaII GGWCC 3 cut(s) 44, 675, 931
BaeGI GKGCMC 2 cut(s) 553, 1074
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BalI TGGCCA 2 cut(s) 62, 521
BanII GRGCYC 3 cut(s) 156, 789, 1131
Bbv12I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 5 cut(s) 338, 643, 737, 1073, 1150
BccI CCATC 3 cut(s) 71, 644, 767
BceAI ACGGC 1 cut(s) 569
BciT130I CCWGG 2 cut(s) 816, 1125
BclI TGATCA 1 cut(s) 192
BcnI CCSGG 4 cut(s) 414, 415, 911, 912
BcoDI GTCTC 3 cut(s) 473, 724, 1133
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 4 cut(s) 396, 603, 1014, 1094
BfmI CTRYAG 1 cut(s) 1059
BisI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
Bme1390I CCNGG 6 cut(s) 414, 415, 816, 911, 912, 1125
Bme18I GGWCC 3 cut(s) 44, 675, 931
BmeT110I CYCGRG 3 cut(s) 413, 689, 910
BmiI GGNNCC 4 cut(s) 45, 264, 676, 757
BmrFI CCNGG 6 cut(s) 414, 415, 816, 911, 912, 1125
BmsI GCATC 2 cut(s) 265, 778
BplI GAGNNNNNCTC 2 cut(s) 704, 736
BpmI CTGGAG 1 cut(s) 1104
Bpu10I CCTNAGC 1 cut(s) 39
Bpu1102I GCTNAGC 1 cut(s) 150
BpuEI CTTGAG 1 cut(s) 140
BpuMI CCSGG 4 cut(s) 414, 415, 911, 912
BsaI GGTCTC 2 cut(s) 724, 1133
BsaJI CCNNGG 9 cut(s) 333, 413, 414, 522, 595, 690, 815, 910, 1124
BsaWI WCCGGW 1 cut(s) 513
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
Bse1I ACTGG 2 cut(s) 887, 1087
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 2 cut(s) 816, 1125
BseDI CCNNGG 9 cut(s) 333, 413, 414, 522, 595, 690, 815, 910, 1124
BseLI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 3 cut(s) 30, 141, 585
BseNI ACTGG 2 cut(s) 887, 1087
BseRI GAGGAG 2 cut(s) 791, 1063
BseSI GKGCMC 2 cut(s) 553, 1074
BseXI GCAGC 5 cut(s) 338, 643, 737, 1073, 1150
BseYI CCCAGC 1 cut(s) 242
Bsh1236I CGCG 1 cut(s) 555
BsiHKAI GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BsiHKCI CYCGRG 3 cut(s) 413, 689, 910
BsiSI CCGG 5 cut(s) 47, 414, 498, 514, 911
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 4 cut(s) 314, 765, 853, 940
BsmAI GTCTC 3 cut(s) 473, 724, 1133
BsmBI CGTCTC 1 cut(s) 473
BsmFI GGGAC 1 cut(s) 82
Bso31I GGTCTC 2 cut(s) 724, 1133
BsoBI CYCGRG 3 cut(s) 413, 689, 910
Bsp1286I GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
Bsp143I GATC 2 cut(s) 192, 576
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 3 cut(s) 22, 451, 659
BspCNI CTCAG 3 cut(s) 31, 142, 584
BspFNI CGCG 1 cut(s) 555
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 4 cut(s) 45, 264, 676, 757
BspMAI CTGCAG 1 cut(s) 1063
BspQI GCTCTTC 1 cut(s) 836
BspTNI GGTCTC 2 cut(s) 724, 1133
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 2 cut(s) 887, 1087
BssECI CCNNGG 9 cut(s) 333, 413, 414, 522, 595, 690, 815, 910, 1124
BssMI GATC 2 cut(s) 192, 576
BssT1I CCWWGG 2 cut(s) 333, 522
Bst2UI CCWGG 2 cut(s) 816, 1125
Bst4CI ACNGT 8 cut(s) 10, 55, 89, 508, 749, 1135, 1144, 1157
Bst6I CTCTTC 1 cut(s) 836
BstC8I GCNNGC 2 cut(s) 140, 553
BstDEI CTNAG 5 cut(s) 39, 150, 435, 571, 828
BstDSI CCRYGG 1 cut(s) 595
BstEII GGTNACC 1 cut(s) 4
BstENI CCTNNNNNAGG 1 cut(s) 851
BstFNI CGCG 1 cut(s) 555
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 2 cut(s) 195, 579
BstMAI GTCTC 3 cut(s) 473, 724, 1133
BstMBI GATC 2 cut(s) 192, 576
BstMWI GCNNNNNNNGC 3 cut(s) 35, 335, 436
BstNI CCWGG 2 cut(s) 816, 1125
BstNSI RCATGY 4 cut(s) 178, 250, 412, 1012
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 6 cut(s) 412, 413, 814, 909, 910, 1123
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 553, 1074
BstUI CGCG 1 cut(s) 555
BstV1I GCAGC 5 cut(s) 338, 643, 737, 1073, 1150
BstXI CCANNNNNNTGG 2 cut(s) 58, 529
BtgI CCRYGG 1 cut(s) 595
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 4 cut(s) 579, 754, 1080, 1162
Cac8I GCNNGC 2 cut(s) 140, 553
CciI TCATGA 1 cut(s) 471
CfoI GCGC 1 cut(s) 174
Cfr9I CCCGGG 2 cut(s) 413, 910
CseI GACGC 1 cut(s) 455
Csp6I GTAC 3 cut(s) 256, 390, 478
CviAII CATG 8 cut(s) 175, 247, 259, 289, 409, 472, 877, 1009
CviQI GTAC 3 cut(s) 256, 390, 478
DdeI CTNAG 5 cut(s) 39, 150, 435, 571, 828
DpnI GATC 2 cut(s) 194, 578
DpnII GATC 2 cut(s) 192, 576
DraIII CACNNNGTG 1 cut(s) 1159
EaeI YGGCCR 4 cut(s) 48, 60, 519, 531
Eam1104I CTCTTC 1 cut(s) 836
EarI CTCTTC 1 cut(s) 836
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 2 cut(s) 333, 522
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 3 cut(s) 156, 789, 1131
Eco31I GGTCTC 2 cut(s) 724, 1133
Eco47I GGWCC 3 cut(s) 44, 675, 931
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 240
Eco88I CYCGRG 3 cut(s) 413, 689, 910
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 1 cut(s) 851
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 2 cut(s) 814, 1123
EcoT14I CCWWGG 2 cut(s) 333, 522
EcoT38I GRGCYC 3 cut(s) 156, 789, 1131
ErhI CCWWGG 2 cut(s) 333, 522
Esp3I CGTCTC 1 cut(s) 473
FaeI CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 880, 1012
FaqI GGGAC 1 cut(s) 82
FatI CATG 8 cut(s) 174, 246, 258, 288, 408, 471, 876, 1008
FbaI TGATCA 1 cut(s) 192
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FriOI GRGCYC 3 cut(s) 156, 789, 1131
Fsp4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FspBI CTAG 4 cut(s) 396, 603, 1014, 1094
GlaI GCGC 1 cut(s) 173
GluI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
GsaI CCCAGC 1 cut(s) 246
GsuI CTGGAG 1 cut(s) 1104
HapII CCGG 5 cut(s) 47, 414, 498, 514, 911
HgaI GACGC 1 cut(s) 455
HhaI GCGC 1 cut(s) 174
Hin1II CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 880, 1012
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 1 cut(s) 238
HpaII CCGG 5 cut(s) 47, 414, 498, 514, 911
HphI GGTGA 7 cut(s) 16, 121, 364, 659, 788, 1057, 1123
Hpy166II GTNNAC 2 cut(s) 406, 551
Hpy188I TCNGA 3 cut(s) 574, 679, 997
Hpy188III TCNNGA 9 cut(s) 67, 196, 472, 617, 743, 776, 838, 898, 1138
Hpy8I GTNNAC 2 cut(s) 406, 551
Hpy99I CGWCG 4 cut(s) 14, 767, 1139, 1148
HpyAV CCTTC 4 cut(s) 276, 749, 868, 1082
HpyCH4III ACNGT 8 cut(s) 10, 55, 89, 508, 749, 1135, 1144, 1157
HpyCH4IV ACGT 1 cut(s) 34
HpyCH4V TGCA 5 cut(s) 278, 551, 905, 923, 1061
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 335, 436
HpyF3I CTNAG 5 cut(s) 39, 150, 435, 571, 828
HpySE526I ACGT 1 cut(s) 34
Hsp92II CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 880, 1012
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 2 cut(s) 192, 576
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 2 cut(s) 516, 755
Lsp1109I GCAGC 5 cut(s) 338, 643, 737, 1073, 1150
LweI GCATC 2 cut(s) 265, 778
MaeI CTAG 4 cut(s) 396, 603, 1014, 1094
MaeII ACGT 1 cut(s) 34
MaeIII GTNAC 4 cut(s) 4, 179, 586, 749
MalI GATC 2 cut(s) 194, 578
MboI GATC 2 cut(s) 192, 576
MboII GAAGA 3 cut(s) 233, 764, 853
MhlI GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
MlsI TGGCCA 2 cut(s) 62, 521
MluCI AATT 5 cut(s) 164, 225, 303, 924, 947
MluI ACGCGT 1 cut(s) 553
MluNI TGGCCA 2 cut(s) 62, 521
MmeI TCCRAC 1 cut(s) 702
Mox20I TGGCCA 2 cut(s) 62, 521
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 2 cut(s) 62, 521
MseI TTAA 2 cut(s) 342, 1168
MslI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
Msp20I TGGCCA 2 cut(s) 62, 521
MspI CCGG 5 cut(s) 47, 414, 498, 514, 911
MspR9I CCNGG 6 cut(s) 414, 415, 816, 911, 912, 1125
MvaI CCWGG 2 cut(s) 816, 1125
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 3 cut(s) 35, 335, 436
NciI CCSGG 4 cut(s) 414, 415, 911, 912
NdeII GATC 2 cut(s) 192, 576
NlaIII CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 880, 1012
NlaIV GGNNCC 4 cut(s) 45, 264, 676, 757
NmeAIII GCCGAG 2 cut(s) 559, 701
NmuCI GTSAC 4 cut(s) 4, 179, 586, 749
NspI RCATGY 4 cut(s) 178, 250, 412, 1012
OliI CACNNNNGTG 2 cut(s) 584, 912
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 1 cut(s) 857
PciI ACATGT 1 cut(s) 1008
PciSI GCTCTTC 1 cut(s) 836
PcsI WCGNNNNNNNCGW 2 cut(s) 759, 1143
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 238
PflMI CCANNNNNTGG 1 cut(s) 314
PkrI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
PscI ACATGT 1 cut(s) 1008
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 2 cut(s) 814, 1123
PspEI GGTNACC 1 cut(s) 4
PspFI CCCAGC 1 cut(s) 242
PspGI CCWGG 2 cut(s) 814, 1123
PspN4I GGNNCC 4 cut(s) 45, 264, 676, 757
PstI CTGCAG 1 cut(s) 1063
RsaI GTAC 3 cut(s) 257, 391, 479
RsaNI GTAC 3 cut(s) 256, 390, 478
RseI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 342, 1168
SatI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
Sau3AI GATC 2 cut(s) 192, 576
ScrFI CCNGG 6 cut(s) 414, 415, 816, 911, 912, 1125
SduI GDGCHC 8 cut(s) 104, 144, 156, 513, 553, 789, 1074, 1131
SfaNI GCATC 2 cut(s) 265, 778
SfcI CTRYAG 1 cut(s) 1059
SinI GGWCC 3 cut(s) 44, 675, 931
SmaI CCCGGG 2 cut(s) 415, 912
SmiMI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
SmlI CTYRAG 1 cut(s) 155
SmoI CTYRAG 1 cut(s) 155
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 5 cut(s) 164, 225, 303, 924, 947
SseBI AGGCCT 1 cut(s) 857
SsiI CCGC 3 cut(s) 22, 451, 659
SspMI CTAG 4 cut(s) 396, 603, 1014, 1094
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 6 cut(s) 412, 413, 814, 909, 910, 1123
StyI CCWWGG 2 cut(s) 333, 522
TaaI ACNGT 8 cut(s) 10, 55, 89, 508, 749, 1135, 1144, 1157
TaiI ACGT 1 cut(s) 37
TaqI TCGA 7 cut(s) 12, 405, 618, 711, 762, 837, 1137
TasI AATT 5 cut(s) 164, 225, 303, 924, 947
TatI WGTACW 2 cut(s) 255, 389
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 342, 1168
Tru9I TTAA 2 cut(s) 342, 1168
TscAI CASTG 4 cut(s) 586, 754, 1087, 1162
TseFI GTSAC 4 cut(s) 4, 179, 586, 749
TseI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
Tsp45I GTSAC 4 cut(s) 4, 179, 586, 749
TspGWI ACGGA 4 cut(s) 113, 448, 584, 768
TspMI CCCGGG 2 cut(s) 413, 910
TspRI CASTG 4 cut(s) 586, 754, 1087, 1162
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 3 cut(s) 44, 675, 931
XagI CCTNNNNNAGG 1 cut(s) 851
XapI RAATTY 3 cut(s) 164, 225, 303
XceI RCATGY 4 cut(s) 178, 250, 412, 1012
XmaI CCCGGG 2 cut(s) 413, 910
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 4 cut(s) 396, 603, 1014, 1094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.