Rroxscaffold_4G00331000

Belongs to the chalcone stilbene synthases family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000409
Physical Location & Seq
Forward (+)
64795579 .. 64797105
1527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00331000.1

Sequence Viewer

Length: 1032 bp
ATGGTGACCGTCGAGGAAGTCCGCAAGGCTCAACGTGCTGAGGGTCCGGCCACCGTCTTGGCCATCGGGACAGCCACTCCTCCCAACTGTATTGACCAGAGCACATACCCCGACTACTACTTTCGTATCACCAACAGCGAGCACAAGGCTGAGCTAAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGTTATATGTATTTGACTGAAGAAATTCTCAAAGAGAATCCCAGCATGTGTGAGTACATGGCCCCTTCACTTGATGCAAGACAAGACATGGTGGTGGTTGAAATTCCAAAGCTTGGGAAAGAGGCAGCTACCAAGGCCATTAAGGAATGGGGTCAGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGTACTACTAGTGGTGTCGACATGCCCGGGGCTGATTACCAGCTCACTAAGCTCTTGGGCCTCCGCCCGTCCGTCAAGCGTCTCATGATGTACCAGCAAGGGTGTTTCGCCGGAGGCACGGTGCTCCGGTTGGCTAAGGATTTGGCCGAGAACAACAAAGGTGCACGTGTTCTTGTTGTTTGCTCAGAGATCACTGCCGTGACTTTCCGTGGGCCTAGCGACACTCATCTCGATAGTCTTGTGGGCCAAGCCTTGTTCGGTGATGGTGCTGCGGCCATTATTGTTGGGTCTGACCCATTGCCCGAGAACATCGAGAAGAGCCTCAACGAGGCCTTCAAACCTTTGAATATCACAGACTGGAACTCACTTTTCTGGATTGCACACCCGGGTGGCCCTGCAATTTTGGACCAAGTAGAGGCTAAATTGGGCCTAAAGACTGAAAAGTTAGAAGCCACAAGGCATGTATTATCAGAGTATGGCAACATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGGAAGTCTGCAGCTAATGGGCACAAGACCACTGGAGAAGGTCTAGAGTGGGGTGTCCTATTTGGATTTGGGCCTGGGCTTACTGTCGAGACCGTCGTGCTTCACAGTGTTGCTGCTTAA

Protein Analysis

343

Amino Acids

37.6

Weight (kDa)

6.41

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 6.2e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 230 - 341 5.9e-52 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 255 - 338 9.8e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000409)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13930
fragaria_vesca FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 405
AciI CCGC 3 cut(s) 22, 451, 659
AcoI YGGCCR 4 cut(s) 48, 60, 531, 660
AcsI RAATTY 3 cut(s) 164, 225, 303
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 554
AfaI GTAC 3 cut(s) 257, 391, 479
AfiI CCNNNNNNNGG 3 cut(s) 314, 715, 802
AflIII ACRYGT 2 cut(s) 553, 870
AgsI TTSAA 3 cut(s) 302, 724, 733
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 1 cut(s) 985
AleI CACNNNNGTG 2 cut(s) 584, 774
AluBI AGCT 6 cut(s) 154, 313, 329, 430, 439, 926
AluI AGCT 6 cut(s) 154, 313, 329, 430, 439, 926
Alw21I GWGCWC 4 cut(s) 104, 144, 513, 553
Alw26I GTCTC 2 cut(s) 473, 995
Alw44I GTGCAC 1 cut(s) 549
Ama87I CYCGRG 3 cut(s) 413, 689, 772
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 4 cut(s) 326, 656, 923, 1025
ApoI RAATTY 3 cut(s) 164, 225, 303
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 9 cut(s) 44, 262, 445, 599, 631, 779, 793, 814, 983
AsuC2I CCSGG 4 cut(s) 414, 415, 773, 774
AsuHPI GGTGA 5 cut(s) 16, 121, 364, 659, 919
AvaI CYCGRG 3 cut(s) 413, 689, 772
AvaII GGWCC 2 cut(s) 44, 793
BaeGI GKGCMC 2 cut(s) 553, 936
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BalI TGGCCA 1 cut(s) 62
BbrPI CACGTG 1 cut(s) 554
Bbv12I GWGCWC 4 cut(s) 104, 144, 513, 553
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 4 cut(s) 338, 643, 935, 1012
BccI CCATC 2 cut(s) 71, 644
BceAI ACGGC 1 cut(s) 569
BciT130I CCWGG 1 cut(s) 987
BclI TGATCA 1 cut(s) 192
BcnI CCSGG 4 cut(s) 414, 415, 773, 774
BcoDI GTCTC 2 cut(s) 473, 995
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 4 cut(s) 396, 603, 876, 956
BfmI CTRYAG 1 cut(s) 921
BisI GCNGC 5 cut(s) 327, 657, 660, 924, 1026
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 5 cut(s) 328, 658, 661, 925, 1027
Bme1390I CCNGG 5 cut(s) 414, 415, 773, 774, 987
Bme18I GGWCC 2 cut(s) 44, 793
BmeT110I CYCGRG 3 cut(s) 413, 689, 772
BmgT120I GGNCC 9 cut(s) 44, 262, 445, 599, 631, 779, 793, 814, 983
BmiI GGNNCC 2 cut(s) 45, 264
BmrFI CCNGG 5 cut(s) 414, 415, 773, 774, 987
BmsI GCATC 1 cut(s) 265
BpmI CTGGAG 1 cut(s) 966
Bpu10I CCTNAGC 2 cut(s) 39, 522
Bpu1102I GCTNAGC 1 cut(s) 150
BpuMI CCSGG 4 cut(s) 414, 415, 773, 774
BsaAI YACGTR 1 cut(s) 554
BsaI GGTCTC 1 cut(s) 995
BsaJI CCNNGG 6 cut(s) 333, 413, 414, 595, 772, 986
BsaWI WCCGGW 1 cut(s) 513
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 3 cut(s) 314, 715, 802
Bse1I ACTGG 2 cut(s) 749, 949
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 1 cut(s) 987
BseDI CCNNGG 6 cut(s) 333, 413, 414, 595, 772, 986
BseLI CCNNNNNNNGG 3 cut(s) 314, 715, 802
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 3 cut(s) 30, 141, 585
BseNI ACTGG 2 cut(s) 749, 949
BseRI GAGGAG 2 cut(s) 69, 925
BseSI GKGCMC 2 cut(s) 553, 936
BseXI GCAGC 4 cut(s) 338, 643, 935, 1012
BseYI CCCAGC 1 cut(s) 242
BsiHKAI GWGCWC 4 cut(s) 104, 144, 513, 553
BsiHKCI CYCGRG 3 cut(s) 413, 689, 772
BsiSI CCGG 5 cut(s) 47, 414, 498, 514, 773
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 3 cut(s) 314, 715, 802
BsmAI GTCTC 2 cut(s) 473, 995
BsmBI CGTCTC 1 cut(s) 473
BsmFI GGGAC 1 cut(s) 82
Bso31I GGTCTC 1 cut(s) 995
BsoBI CYCGRG 3 cut(s) 413, 689, 772
Bsp1286I GDGCHC 5 cut(s) 104, 144, 513, 553, 936
Bsp143I GATC 2 cut(s) 192, 576
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 3 cut(s) 22, 451, 659
BspCNI CTCAG 3 cut(s) 31, 142, 584
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 2 cut(s) 45, 264
BspMAI CTGCAG 1 cut(s) 925
BspQI GCTCTTC 1 cut(s) 698
BspTNI GGTCTC 1 cut(s) 995
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 2 cut(s) 749, 949
BssECI CCNNGG 6 cut(s) 333, 413, 414, 595, 772, 986
BssMI GATC 2 cut(s) 192, 576
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 987
Bst4CI ACNGT 7 cut(s) 10, 55, 89, 508, 997, 1006, 1019
Bst6I CTCTTC 1 cut(s) 698
BstBAI YACGTR 1 cut(s) 554
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 5 cut(s) 39, 150, 435, 522, 571
BstDSI CCRYGG 1 cut(s) 595
BstEII GGTNACC 1 cut(s) 4
BstENI CCTNNNNNAGG 1 cut(s) 713
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 2 cut(s) 195, 579
BstMAI GTCTC 2 cut(s) 473, 995
BstMBI GATC 2 cut(s) 192, 576
BstMWI GCNNNNNNNGC 3 cut(s) 35, 335, 436
BstNI CCWGG 1 cut(s) 987
BstNSI RCATGY 5 cut(s) 178, 250, 412, 851, 874
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 5 cut(s) 412, 413, 771, 772, 985
BstSFI CTRYAG 1 cut(s) 921
BstSLI GKGCMC 2 cut(s) 553, 936
BstV1I GCAGC 4 cut(s) 338, 643, 935, 1012
BstXI CCANNNNNNTGG 1 cut(s) 58
BtgI CCRYGG 1 cut(s) 595
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 3 cut(s) 579, 942, 1024
Cac8I GCNNGC 1 cut(s) 140
CciI TCATGA 1 cut(s) 471
CfoI GCGC 1 cut(s) 174
Cfr13I GGNCC 9 cut(s) 44, 262, 445, 599, 631, 779, 793, 814, 983
Cfr9I CCCGGG 2 cut(s) 413, 772
CseI GACGC 1 cut(s) 455
Csp6I GTAC 3 cut(s) 256, 390, 478
CviAII CATG 8 cut(s) 175, 247, 259, 289, 409, 472, 848, 871
CviQI GTAC 3 cut(s) 256, 390, 478
DdeI CTNAG 5 cut(s) 39, 150, 435, 522, 571
DpnI GATC 2 cut(s) 194, 578
DpnII GATC 2 cut(s) 192, 576
EaeI YGGCCR 4 cut(s) 48, 60, 531, 660
Eam1104I CTCTTC 1 cut(s) 698
EarI CTCTTC 1 cut(s) 698
EciI GGCGGA 1 cut(s) 440
Eco130I CCWWGG 1 cut(s) 333
Eco147I AGGCCT 1 cut(s) 719
Eco31I GGTCTC 1 cut(s) 995
Eco47I GGWCC 2 cut(s) 44, 793
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 554
Eco88I CYCGRG 3 cut(s) 413, 689, 772
Eco91I GGTNACC 1 cut(s) 4
EcoNI CCTNNNNNAGG 1 cut(s) 713
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 985
EcoT14I CCWWGG 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 333
Esp3I CGTCTC 1 cut(s) 473
FaeI CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 851, 874
FaqI GGGAC 1 cut(s) 82
FatI CATG 8 cut(s) 174, 246, 258, 288, 408, 471, 847, 870
FbaI TGATCA 1 cut(s) 192
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 5 cut(s) 327, 657, 660, 924, 1026
Fsp4HI GCNGC 5 cut(s) 327, 657, 660, 924, 1026
FspBI CTAG 4 cut(s) 396, 603, 876, 956
GlaI GCGC 1 cut(s) 173
GluI GCNGC 5 cut(s) 327, 657, 660, 924, 1026
GsaI CCCAGC 1 cut(s) 246
GsuI CTGGAG 1 cut(s) 966
HapII CCGG 5 cut(s) 47, 414, 498, 514, 773
HgaI GACGC 1 cut(s) 455
HhaI GCGC 1 cut(s) 174
Hin1II CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 851, 874
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 1 cut(s) 238
HpaII CCGG 5 cut(s) 47, 414, 498, 514, 773
HphI GGTGA 5 cut(s) 16, 121, 364, 659, 919
Hpy166II GTNNAC 2 cut(s) 406, 551
Hpy188I TCNGA 3 cut(s) 574, 679, 859
Hpy188III TCNNGA 8 cut(s) 67, 196, 472, 617, 700, 760, 956, 1000
Hpy8I GTNNAC 2 cut(s) 406, 551
Hpy99I CGWCG 2 cut(s) 14, 1010
HpyAV CCTTC 3 cut(s) 276, 730, 944
HpyCH4III ACNGT 7 cut(s) 10, 55, 89, 508, 997, 1006, 1019
HpyCH4IV ACGT 2 cut(s) 34, 553
HpyCH4V TGCA 5 cut(s) 278, 551, 767, 785, 923
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 335, 436
HpyF3I CTNAG 5 cut(s) 39, 150, 435, 522, 571
HpySE526I ACGT 2 cut(s) 34, 553
Hsp92II CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 851, 874
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 2 cut(s) 192, 576
LguI GCTCTTC 1 cut(s) 698
LmnI GCTCC 1 cut(s) 516
Lsp1109I GCAGC 4 cut(s) 338, 643, 935, 1012
LweI GCATC 1 cut(s) 265
MaeI CTAG 4 cut(s) 396, 603, 876, 956
MaeII ACGT 2 cut(s) 34, 553
MaeIII GTNAC 3 cut(s) 4, 179, 586
MalI GATC 2 cut(s) 194, 578
MboI GATC 2 cut(s) 192, 576
MboII GAAGA 2 cut(s) 233, 715
MhlI GDGCHC 5 cut(s) 104, 144, 513, 553, 936
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 5 cut(s) 164, 225, 303, 786, 809
MluNI TGGCCA 1 cut(s) 62
Mox20I TGGCCA 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 62
MseI TTAA 2 cut(s) 342, 1030
MslI CAYNNNNRTG 3 cut(s) 293, 584, 774
Msp20I TGGCCA 1 cut(s) 62
MspI CCGG 5 cut(s) 47, 414, 498, 514, 773
MspR9I CCNGG 5 cut(s) 414, 415, 773, 774, 987
MvaI CCWGG 1 cut(s) 987
MwoI GCNNNNNNNGC 3 cut(s) 35, 335, 436
NciI CCSGG 4 cut(s) 414, 415, 773, 774
NdeII GATC 2 cut(s) 192, 576
NlaIII CATG 8 cut(s) 178, 250, 262, 292, 412, 475, 851, 874
NlaIV GGNNCC 2 cut(s) 45, 264
NmeAIII GCCGAG 1 cut(s) 559
NmuCI GTSAC 3 cut(s) 4, 179, 586
NspI RCATGY 5 cut(s) 178, 250, 412, 851, 874
OliI CACNNNNGTG 2 cut(s) 584, 774
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 1 cut(s) 719
PciI ACATGT 1 cut(s) 870
PciSI GCTCTTC 1 cut(s) 698
PcsI WCGNNNNNNNCGW 1 cut(s) 1005
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 238
PflMI CCANNNNNTGG 1 cut(s) 314
PkrI GCNGC 5 cut(s) 328, 658, 661, 925, 1027
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
Ppu21I YACGTR 1 cut(s) 554
PscI ACATGT 1 cut(s) 870
Psp6I CCWGG 1 cut(s) 985
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 1 cut(s) 4
PspFI CCCAGC 1 cut(s) 242
PspGI CCWGG 1 cut(s) 985
PspN4I GGNNCC 2 cut(s) 45, 264
PspPI GGNCC 9 cut(s) 44, 262, 445, 599, 631, 779, 793, 814, 983
PstI CTGCAG 1 cut(s) 925
RsaI GTAC 3 cut(s) 257, 391, 479
RsaNI GTAC 3 cut(s) 256, 390, 478
RseI CAYNNNNRTG 3 cut(s) 293, 584, 774
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 698
SaqAI TTAA 2 cut(s) 342, 1030
SatI GCNGC 5 cut(s) 327, 657, 660, 924, 1026
Sau3AI GATC 2 cut(s) 192, 576
Sau96I GGNCC 9 cut(s) 44, 262, 445, 599, 631, 779, 793, 814, 983
ScrFI CCNGG 5 cut(s) 414, 415, 773, 774, 987
SduI GDGCHC 5 cut(s) 104, 144, 513, 553, 936
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 1 cut(s) 921
SinI GGWCC 2 cut(s) 44, 793
SmaI CCCGGG 2 cut(s) 415, 774
SmiMI CAYNNNNRTG 3 cut(s) 293, 584, 774
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 5 cut(s) 164, 225, 303, 786, 809
SseBI AGGCCT 1 cut(s) 719
SsiI CCGC 3 cut(s) 22, 451, 659
SspMI CTAG 4 cut(s) 396, 603, 876, 956
StuI AGGCCT 1 cut(s) 719
StyD4I CCNGG 5 cut(s) 412, 413, 771, 772, 985
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 7 cut(s) 10, 55, 89, 508, 997, 1006, 1019
TaiI ACGT 2 cut(s) 37, 556
TaqI TCGA 5 cut(s) 12, 405, 618, 699, 999
TasI AATT 5 cut(s) 164, 225, 303, 786, 809
TatI WGTACW 2 cut(s) 255, 389
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 342, 1030
Tru9I TTAA 2 cut(s) 342, 1030
TscAI CASTG 3 cut(s) 586, 949, 1024
TseFI GTSAC 3 cut(s) 4, 179, 586
TseI GCWGC 4 cut(s) 326, 656, 923, 1025
Tsp45I GTSAC 3 cut(s) 4, 179, 586
TspGWI ACGGA 2 cut(s) 448, 584
TspMI CCCGGG 2 cut(s) 413, 772
TspRI CASTG 3 cut(s) 586, 949, 1024
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 2 cut(s) 44, 793
XagI CCTNNNNNAGG 1 cut(s) 713
XapI RAATTY 3 cut(s) 164, 225, 303
XbaI TCTAGA 1 cut(s) 955
XceI RCATGY 5 cut(s) 178, 250, 412, 851, 874
XmaI CCCGGG 2 cut(s) 413, 772
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 4 cut(s) 396, 603, 876, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.