Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000409

Physical Location & Seq

Genomic Coordinates Forward (+)

64775134 .. 64786754

Gene Structure 11621 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00330980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGGTGACCGTCGAGGAAGTCCGCAAGGCTCAACGCGCTGAGGGTCCGGCTACCGTCTTGGCCATCGGGACAGCAACTCCTCCCAACTGTATTGACCAGAGCACATACCCCGACTACTACTTCCGTATCACTAAGAGCGAGCACAAGGCTGAGCTCAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGCTACATGTACTTGACCGAAGAAATTCTTAAGGAGAATCCTAGTATGTGTGAGTACATGGCCCCTTCACTTGATGCAAGACAAGATATGGTGGTTGTTGAAATTCCAAAGCTTGGAAAAGAGGCTGCCACTAAGGCTATTAAGGAATGGGGTCAGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGTACCACTAGTGGTGTCGACATGCCCGGGGCCGATTACCAGCTCACTAAGCTCTTAGGCCTCCGCCCGTCCGTGAAGCGTCTCATGATGTACCAACAAGGGTGTTTCGCGGAGGCACAAGTACTCGGTTGGCTAAGGACTTGGCCGAGAACAACAAGGGTGCACGTGTTCTTGTTGTTTGCTCGAGATCACCGCCCCTTTGTTCGAGTTGGTCTCGCAGCCCAAACTATCCTTCCCGACAGTGACGGAGCCATCGACGGGCATCTTCGTGAAGTTGGGCTCACATTTCACCTCCTCAAAGATGTTCCCGGACTGATTTCAAAGAACATCGAGAAGAGCCTCAACGAGGCCTTCAAACCTTTGAACATCACAGACTGGAACTCACTTTTCTGGATTGCACACCCAGGTGGCCCTGCAATTTTAGACCAAGTAGAGGCTAAATTGGGCCTGAAGCCTGAAAAGTTAGAAGCCACAAGGCATGTATTATCCGAGTACGGCAATATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGAAAGTCTGCAGCTAATGGGCACAAGACCACTGGAGAAGGCCTGGAGTGGGGTGTCCTATTTGGTTTTGGGCCAGGGCTCACCGTCGAGACCGTCGTGCTTCACAATGCAAATTCCTACTTTGGCGATAGTCGTATCCAAGGCGGTTCATTGCTCAAGGACCGAAATTCTCTTTCATGTAAACTGTTAGAAGACTTCCCGGAAATACCATCCGAAGATTGTGAGGAAGCAAGAGGAGACCTCGGACCAAATGGAAAAATCCTCCTAGTGGTCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009058 GO:0009812 GO:0009813 GO:0016210 GO:0016740 GO:0016746 GO:0016747 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00941 ko01100 ko01110 ko04712 map00941 map01100 map01110 map04712

Pfam Domains

Protein Families

Chal_sti_synt_C Chal_sti_synt_N

Protein Analysis

402

Amino Acids

44.85

Weight (kDa)

7.13

Isoelectric Point (pI)

41.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chal_sti_synt_N	PF00195	5 - 171	5.5e-85	Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C	PF02797	201 - 346	1.3e-68	Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C	PF08541	261 - 344	4.7e-06	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13930
fragaria_vesca	FvH4_2g28040 FvH4_2g28050 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160 FvH4_7g01160
malus_domestica	MD04G1003000.v1.1 MD04G1003300.v1.1 MD04G1003400.v1.1 MD04G1111500.v1.1 MD08G1116200.v1.1 MD13G1285100.v1.1 MD14G1160800.v1.1 MD14G1160900.v1.1 MD15G1131700.v1.1 MD15G1132000.v1.1 MD15G1132100.v1.1 MD15G1132200.v1.1 MD15G1132300.v1.1
prunus_persica	Prupe.1G002900_v2.0.a1 Prupe.1G002900_v2.0.a1 Prupe.1G003000_v2.0.a1 Prupe.4G252100_v2.0.a1 Prupe.4G252800_v2.0.a1 Prupe.4G253000_v2.0.a1 Prupe.4G253100_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005700_v2.0.a1 Prupe.I005800_v2.0.a1
pyrus_communis	pycom04g00310 pycom04g00320 pycom04g00350 pycom13g10200 pycom15g11900 pycom15g11910 pycom15g11920 pycom15g11930 pycom15g11940 pycom420g00730
rosa_chinensis	RchiOBHm_Chr1g0316441 RchiOBHm_Chr1g0316451 RchiOBHm_Chr1g0316461 RchiOBHm_Chr4g0399981 RchiOBHm_Chr6g0296951 RchiOBHm_Chr6g0297001 RchiOBHm_Chr6g0297011
rosa_laevigata	RLG00000009221 RLG00000011646 RLG00000030671 RLG00000030673
rosa_multiflora	Rmu_co8031452.1_g000001 Rmu_co8152518.1_g000001 Rmu_sc0000081.1_g000010 Rmu_sc0004672.1_g000001 Rmu_sc0006453.1_g000028 Rmu_sc0006790.1_g000004 Rmu_sc0007272.1_g000004 Rmu_sc0023107.1_g000002 Rmu_sc0023714.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330980 Rroxscaffold_4G00330990 Rroxscaffold_4G00331000 Rroxscaffold_7G00171030
rosa_rugosa	Rorug01G0010500 Rorug01G0010600 Rorug01G0011000 Rorug03G0299400 Rorug03G0299500 Rorug04G0022100 Rorug05G0381700 Rorug06G0267700
rosa_samantha	Rh1AG020500 Rh1BG015600 Rh1BG015800 Rh1CG018400 Rh1CG018600 Rh1CG018800 Rh1DG015500 Rh1DG015700 Rh1DG015900 Rh4AG097700 Rh4BG095700 Rh4CG106900 Rh4DG092500 Rh6AG378300 Rh6BG386300 Rh6CG392100 Rh6CG392300 Rh6DG379000
rosa_wichuraiana	Rw0G010230 Rw1G001330 Rw1G001340 Rw4G008110 Rw4G013630 Rw6G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	314
AccI	GTMKAC	1 cut(s)	405
AccII	CGCG	2 cut(s)	36, 497
AciI	CCGC	5 cut(s)	22, 451, 497, 580, 1074
AcoI	YGGCCR	2 cut(s)	60, 530
AcsI	RAATTY	5 cut(s)	164, 225, 303, 1042, 1096
AcuI	CTGAAG	1 cut(s)	857
AcvI	CACGTG	1 cut(s)	553
AfaI	GTAC	6 cut(s)	212, 257, 391, 479, 510, 881
AfeI	AGCGCT	1 cut(s)	203
AfiI	CCNNNNNNNGG	6 cut(s)	314, 645, 733, 820, 979, 1198
AflII	CTTAAG	1 cut(s)	230
AflIII	ACRYGT	2 cut(s)	207, 552
AgsI	TTSAA	4 cut(s)	302, 708, 742, 751
AhlI	ACTAGT	1 cut(s)	395
AjnI	CCWGG	3 cut(s)	790, 972, 1003
AjuI	GAANNNNNNNTTGG	2 cut(s)	603, 635
AleI	CACNNNNGTG	1 cut(s)	792
AluBI	AGCT	5 cut(s)	154, 313, 430, 439, 944
AluI	AGCT	5 cut(s)	154, 313, 430, 439, 944
Alw21I	GWGCWC	4 cut(s)	104, 144, 156, 552
Alw26I	GTCTC	4 cut(s)	473, 605, 1013, 1161
Alw44I	GTGCAC	1 cut(s)	548
Ama87I	CYCGRG	2 cut(s)	413, 570
Aor51HI	AGCGCT	1 cut(s)	203
ApaLI	GTGCAC	1 cut(s)	548
ApeKI	GCWGC	3 cut(s)	326, 605, 941
ApoI	RAATTY	5 cut(s)	164, 225, 303, 1042, 1096
Asp700I	GAANNNNTTC	1 cut(s)	225
AspLEI	GCGC	3 cut(s)	38, 174, 204
AspS9I	GGNCC	8 cut(s)	44, 262, 417, 797, 832, 1001, 1090, 1175
AsuC2I	CCSGG	4 cut(s)	414, 415, 696, 1130
AsuHPI	GGTGA	6 cut(s)	16, 364, 569, 668, 937, 1003
AvaI	CYCGRG	2 cut(s)	413, 570
AvaII	GGWCC	3 cut(s)	44, 1090, 1175
BaeGI	GKGCMC	2 cut(s)	552, 954
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BalI	TGGCCA	1 cut(s)	62
BanII	GRGCYC	3 cut(s)	156, 669, 1011
BbrPI	CACGTG	1 cut(s)	553
BbsI	GAAGAC	1 cut(s)	1128
Bbv12I	GWGCWC	4 cut(s)	104, 144, 156, 552
BbvCI	CCTCAGC	1 cut(s)	39
BbvI	GCAGC	3 cut(s)	313, 617, 953
BccI	CCATC	3 cut(s)	71, 647, 1147
BceAI	ACGGC	1 cut(s)	898
BciT130I	CCWGG	3 cut(s)	792, 974, 1005
BciVI	GTATCC	1 cut(s)	1076
BclI	TGATCA	1 cut(s)	192
BcnI	CCSGG	4 cut(s)	414, 415, 696, 1130
BcoDI	GTCTC	4 cut(s)	473, 605, 1013, 1161
BcuI	ACTAGT	1 cut(s)	395
BfaI	CTAG	4 cut(s)	243, 396, 894, 1196
BfmI	CTRYAG	1 cut(s)	939
BfoI	RGCGCY	1 cut(s)	205
BfrI	CTTAAG	1 cut(s)	230
BfuI	GTATCC	1 cut(s)	1076
BglI	GCCNNNNNGGC	1 cut(s)	335
BisI	GCNGC	3 cut(s)	327, 606, 942
BlpI	GCTNAGC	1 cut(s)	150
BlsI	GCNGC	3 cut(s)	328, 607, 943
BmcAI	AGTACT	1 cut(s)	510
Bme1390I	CCNGG	7 cut(s)	414, 415, 696, 792, 974, 1005, 1130
Bme18I	GGWCC	3 cut(s)	44, 1090, 1175
BmeT110I	CYCGRG	2 cut(s)	413, 570
BmgT120I	GGNCC	8 cut(s)	44, 262, 417, 797, 832, 1001, 1090, 1175
BmiI	GGNNCC	4 cut(s)	45, 264, 418, 637
BmrFI	CCNGG	7 cut(s)	414, 415, 696, 792, 974, 1005, 1130
BmsI	GCATC	2 cut(s)	265, 658
BpiI	GAAGAC	1 cut(s)	1128
BplI	GAGNNNNNCTC	4 cut(s)	585, 617, 1155, 1187
BpmI	CTGGAG	2 cut(s)	984, 995
Bpu10I	CCTNAGC	2 cut(s)	39, 521
Bpu1102I	GCTNAGC	1 cut(s)	150
BpuEI	CTTGAG	2 cut(s)	140, 1070
BpuMI	CCSGG	4 cut(s)	414, 415, 696, 1130
BsaAI	YACGTR	1 cut(s)	553
BsaI	GGTCTC	3 cut(s)	605, 1013, 1161
BsaJI	CCNNGG	6 cut(s)	413, 414, 790, 1004, 1069, 1171
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	6 cut(s)	314, 645, 733, 820, 979, 1198
Bse1I	ACTGG	2 cut(s)	767, 967
Bse3DI	GCAATG	1 cut(s)	1079
BseBI	CCWGG	3 cut(s)	792, 974, 1005
BseDI	CCNNGG	6 cut(s)	413, 414, 790, 1004, 1069, 1171
BseGI	GGATG	1 cut(s)	1139
BseLI	CCNNNNNNNGG	6 cut(s)	314, 645, 733, 820, 979, 1198
BseMI	GCAATG	1 cut(s)	1079
BseMII	CTCAG	2 cut(s)	30, 141
BseNI	ACTGG	2 cut(s)	767, 967
BseRI	GAGGAG	4 cut(s)	69, 671, 943, 1179
BseSI	GKGCMC	2 cut(s)	552, 954
BseXI	GCAGC	3 cut(s)	313, 617, 953
Bsh1236I	CGCG	2 cut(s)	36, 497
BsiHKAI	GWGCWC	4 cut(s)	104, 144, 156, 552
BsiHKCI	CYCGRG	2 cut(s)	413, 570
BsiSI	CCGG	4 cut(s)	47, 414, 696, 1130
BslFI	GGGAC	1 cut(s)	82
BslI	CCNNNNNNNGG	6 cut(s)	314, 645, 733, 820, 979, 1198
BsmAI	GTCTC	4 cut(s)	473, 605, 1013, 1161
BsmBI	CGTCTC	1 cut(s)	473
BsmFI	GGGAC	1 cut(s)	82
Bso31I	GGTCTC	3 cut(s)	605, 1013, 1161
BsoBI	CYCGRG	2 cut(s)	413, 570
Bsp1286I	GDGCHC	7 cut(s)	104, 144, 156, 552, 669, 954, 1011
Bsp143I	GATC	2 cut(s)	192, 574
Bsp1720I	GCTNAGC	1 cut(s)	150
BspACI	CCGC	5 cut(s)	22, 451, 497, 580, 1074
BspCNI	CTCAG	2 cut(s)	31, 142
BspFNI	CGCG	2 cut(s)	36, 497
BspHI	TCATGA	1 cut(s)	471
BspLI	GGNNCC	4 cut(s)	45, 264, 418, 637
BspMAI	CTGCAG	1 cut(s)	943
BspQI	GCTCTTC	1 cut(s)	716
BspTI	CTTAAG	1 cut(s)	230
BspTNI	GGTCTC	3 cut(s)	605, 1013, 1161
BsrDI	GCAATG	1 cut(s)	1079
BsrI	ACTGG	2 cut(s)	767, 967
BssECI	CCNNGG	6 cut(s)	413, 414, 790, 1004, 1069, 1171
BssMI	GATC	2 cut(s)	192, 574
BssT1I	CCWWGG	1 cut(s)	1069
Bst2UI	CCWGG	3 cut(s)	792, 974, 1005
Bst4CI	ACNGT	7 cut(s)	10, 55, 89, 629, 1015, 1024, 1116
Bst6I	CTCTTC	1 cut(s)	716
BstAFI	CTTAAG	1 cut(s)	230
BstBAI	YACGTR	1 cut(s)	553
BstC8I	GCNNGC	1 cut(s)	140
BstDEI	CTNAG	7 cut(s)	39, 132, 150, 333, 435, 442, 521
BstEII	GGTNACC	1 cut(s)	4
BstENI	CCTNNNNNAGG	1 cut(s)	731
BstF5I	GGATG	1 cut(s)	1139
BstFNI	CGCG	2 cut(s)	36, 497
BstH2I	RGCGCY	1 cut(s)	205
BstHHI	GCGC	3 cut(s)	38, 174, 204
BstKTI	GATC	2 cut(s)	195, 577
BstMAI	GTCTC	4 cut(s)	473, 605, 1013, 1161
BstMBI	GATC	2 cut(s)	192, 574
BstMWI	GCNNNNNNNGC	3 cut(s)	35, 335, 436
BstNI	CCWGG	3 cut(s)	792, 974, 1005
BstNSI	RCATGY	4 cut(s)	178, 211, 412, 869
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	7 cut(s)	412, 413, 694, 790, 972, 1003, 1128
BstSFI	CTRYAG	1 cut(s)	939
BstSLI	GKGCMC	2 cut(s)	552, 954
BstUI	CGCG	2 cut(s)	36, 497
BstV1I	GCAGC	3 cut(s)	313, 617, 953
BstV2I	GAAGAC	1 cut(s)	1128
BsuI	GTATCC	1 cut(s)	1076
BtsCI	GGATG	1 cut(s)	1139
BtsIMutI	CAGTG	2 cut(s)	634, 960
Cac8I	GCNNGC	1 cut(s)	140
CciI	TCATGA	1 cut(s)	471
CfoI	GCGC	3 cut(s)	38, 174, 204
Cfr13I	GGNCC	8 cut(s)	44, 262, 417, 797, 832, 1001, 1090, 1175
Cfr9I	CCCGGG	1 cut(s)	413
CseI	GACGC	1 cut(s)	455
Csp6I	GTAC	6 cut(s)	211, 256, 390, 478, 509, 880
CviAII	CATG	7 cut(s)	175, 208, 259, 409, 472, 866, 1107
CviQI	GTAC	6 cut(s)	211, 256, 390, 478, 509, 880
DdeI	CTNAG	7 cut(s)	39, 132, 150, 333, 435, 442, 521
DpnI	GATC	2 cut(s)	194, 576
DpnII	GATC	2 cut(s)	192, 574
EaeI	YGGCCR	2 cut(s)	60, 530
Eam1104I	CTCTTC	1 cut(s)	716
EarI	CTCTTC	1 cut(s)	716
EciI	GGCGGA	1 cut(s)	440
Ecl136II	GAGCTC	1 cut(s)	154
Eco130I	CCWWGG	1 cut(s)	1069
Eco147I	AGGCCT	3 cut(s)	447, 737, 972
Eco24I	GRGCYC	3 cut(s)	156, 669, 1011
Eco31I	GGTCTC	3 cut(s)	605, 1013, 1161
Eco47I	GGWCC	3 cut(s)	44, 1090, 1175
Eco47III	AGCGCT	1 cut(s)	203
Eco53kI	GAGCTC	1 cut(s)	154
Eco57I	CTGAAG	1 cut(s)	857
Eco72I	CACGTG	1 cut(s)	553
Eco88I	CYCGRG	2 cut(s)	413, 570
Eco91I	GGTNACC	1 cut(s)	4
EcoICRI	GAGCTC	1 cut(s)	154
EcoNI	CCTNNNNNAGG	1 cut(s)	731
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	3 cut(s)	790, 972, 1003
EcoT14I	CCWWGG	1 cut(s)	1069
EcoT38I	GRGCYC	3 cut(s)	156, 669, 1011
ErhI	CCWWGG	1 cut(s)	1069
Esp3I	CGTCTC	1 cut(s)	473
FaeI	CATG	7 cut(s)	178, 211, 262, 412, 475, 869, 1110
FalI	AAGNNNNNCTT	2 cut(s)	213, 245
FaqI	GGGAC	1 cut(s)	82
FatI	CATG	7 cut(s)	174, 207, 258, 408, 471, 865, 1106
FbaI	TGATCA	1 cut(s)	192
FblI	GTMKAC	1 cut(s)	405
Fnu4HI	GCNGC	3 cut(s)	327, 606, 942
FokI	GGATG	1 cut(s)	1126
FriOI	GRGCYC	3 cut(s)	156, 669, 1011
Fsp4HI	GCNGC	3 cut(s)	327, 606, 942
FspBI	CTAG	4 cut(s)	243, 396, 894, 1196
GlaI	GCGC	3 cut(s)	37, 173, 203
GluI	GCNGC	3 cut(s)	327, 606, 942
GsuI	CTGGAG	2 cut(s)	984, 995
HaeII	RGCGCY	1 cut(s)	205
HapII	CCGG	4 cut(s)	47, 414, 696, 1130
HgaI	GACGC	1 cut(s)	455
HhaI	GCGC	3 cut(s)	38, 174, 204
Hin1II	CATG	7 cut(s)	178, 211, 262, 412, 475, 869, 1110
Hin6I	GCGC	3 cut(s)	36, 172, 202
HinP1I	GCGC	3 cut(s)	36, 172, 202
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HindIII	AAGCTT	1 cut(s)	311
HinfI	GANTC	1 cut(s)	238
HpaII	CCGG	4 cut(s)	47, 414, 696, 1130
HphI	GGTGA	6 cut(s)	16, 364, 569, 668, 937, 1003
Hpy166II	GTNNAC	3 cut(s)	406, 550, 1112
Hpy188I	TCNGA	4 cut(s)	877, 1144, 1175, 1208
Hpy188III	TCNNGA	9 cut(s)	67, 196, 472, 572, 623, 656, 718, 778, 1018
Hpy8I	GTNNAC	3 cut(s)	406, 550, 1112
Hpy99I	CGWCG	4 cut(s)	14, 647, 1019, 1028
HpyAV	CCTTC	4 cut(s)	276, 629, 748, 962
HpyCH4III	ACNGT	7 cut(s)	10, 55, 89, 629, 1015, 1024, 1116
HpyCH4IV	ACGT	1 cut(s)	552
HpyCH4V	TGCA	6 cut(s)	278, 550, 785, 803, 941, 1040
HpyF10VI	GCNNNNNNNGC	3 cut(s)	35, 335, 436
HpyF3I	CTNAG	7 cut(s)	39, 132, 150, 333, 435, 442, 521
HpySE526I	ACGT	1 cut(s)	552
Hsp92II	CATG	7 cut(s)	178, 211, 262, 412, 475, 869, 1110
HspAI	GCGC	3 cut(s)	36, 172, 202
Ksp22I	TGATCA	1 cut(s)	192
Kzo9I	GATC	2 cut(s)	192, 574
LguI	GCTCTTC	1 cut(s)	716
LmnI	GCTCC	1 cut(s)	635
Lsp1109I	GCAGC	3 cut(s)	313, 617, 953
LweI	GCATC	2 cut(s)	265, 658
MaeI	CTAG	4 cut(s)	243, 396, 894, 1196
MaeII	ACGT	1 cut(s)	552
MaeIII	GTNAC	3 cut(s)	4, 179, 629
MalI	GATC	2 cut(s)	194, 576
MboI	GATC	2 cut(s)	192, 574
MboII	GAAGA	5 cut(s)	233, 644, 733, 1133, 1157
MhlI	GDGCHC	7 cut(s)	104, 144, 156, 552, 669, 954, 1011
MlsI	TGGCCA	1 cut(s)	62
MluCI	AATT	7 cut(s)	164, 225, 303, 804, 827, 1042, 1096
MluNI	TGGCCA	1 cut(s)	62
Mox20I	TGGCCA	1 cut(s)	62
MroXI	GAANNNNTTC	1 cut(s)	225
MscI	TGGCCA	1 cut(s)	62
MseI	TTAA	2 cut(s)	231, 342
MslI	CAYNNNNRTG	2 cut(s)	654, 792
Msp20I	TGGCCA	1 cut(s)	62
MspCI	CTTAAG	1 cut(s)	230
MspI	CCGG	4 cut(s)	47, 414, 696, 1130
MspR9I	CCNGG	7 cut(s)	414, 415, 696, 792, 974, 1005, 1130
MvaI	CCWGG	3 cut(s)	792, 974, 1005
MvnI	CGCG	2 cut(s)	36, 497
MwoI	GCNNNNNNNGC	3 cut(s)	35, 335, 436
NciI	CCSGG	4 cut(s)	414, 415, 696, 1130
NdeII	GATC	2 cut(s)	192, 574
NlaIII	CATG	7 cut(s)	178, 211, 262, 412, 475, 869, 1110
NlaIV	GGNNCC	4 cut(s)	45, 264, 418, 637
NmeAIII	GCCGAG	1 cut(s)	558
NmuCI	GTSAC	3 cut(s)	4, 179, 629
NspI	RCATGY	4 cut(s)	178, 211, 412, 869
OliI	CACNNNNGTG	1 cut(s)	792
PaeR7I	CTCGAG	1 cut(s)	570
PagI	TCATGA	1 cut(s)	471
PceI	AGGCCT	3 cut(s)	447, 737, 972
PciI	ACATGT	1 cut(s)	207
PciSI	GCTCTTC	1 cut(s)	716
PcsI	WCGNNNNNNNCGW	2 cut(s)	639, 1023
PdmI	GAANNNNTTC	1 cut(s)	225
PfeI	GAWTC	1 cut(s)	238
PflMI	CCANNNNNTGG	1 cut(s)	314
PfoI	TCCNGGA	2 cut(s)	694, 1128
PkrI	GCNGC	3 cut(s)	328, 607, 943
PmaCI	CACGTG	1 cut(s)	553
PmlI	CACGTG	1 cut(s)	553
Ppu21I	YACGTR	1 cut(s)	553
PscI	ACATGT	1 cut(s)	207
Psp124BI	GAGCTC	1 cut(s)	156
Psp6I	CCWGG	3 cut(s)	790, 972, 1003
PspCI	CACGTG	1 cut(s)	553
PspEI	GGTNACC	1 cut(s)	4
PspGI	CCWGG	3 cut(s)	790, 972, 1003
PspN4I	GGNNCC	4 cut(s)	45, 264, 418, 637
PspPI	GGNCC	8 cut(s)	44, 262, 417, 797, 832, 1001, 1090, 1175
PstI	CTGCAG	1 cut(s)	943
RsaI	GTAC	6 cut(s)	212, 257, 391, 479, 510, 881
RsaNI	GTAC	6 cut(s)	211, 256, 390, 478, 509, 880
RseI	CAYNNNNRTG	2 cut(s)	654, 792
SacI	GAGCTC	1 cut(s)	156
SalI	GTCGAC	1 cut(s)	404
SapI	GCTCTTC	1 cut(s)	716
SaqAI	TTAA	2 cut(s)	231, 342
SatI	GCNGC	3 cut(s)	327, 606, 942
Sau3AI	GATC	2 cut(s)	192, 574
Sau96I	GGNCC	8 cut(s)	44, 262, 417, 797, 832, 1001, 1090, 1175
ScaI	AGTACT	1 cut(s)	510
ScrFI	CCNGG	7 cut(s)	414, 415, 696, 792, 974, 1005, 1130
SduI	GDGCHC	7 cut(s)	104, 144, 156, 552, 669, 954, 1011
SfaNI	GCATC	2 cut(s)	265, 658
SfcI	CTRYAG	1 cut(s)	939
Sfr274I	CTCGAG	1 cut(s)	570
SinI	GGWCC	3 cut(s)	44, 1090, 1175
SlaI	CTCGAG	1 cut(s)	570
SmaI	CCCGGG	1 cut(s)	415
SmiMI	CAYNNNNRTG	2 cut(s)	654, 792
SmlI	CTYRAG	4 cut(s)	155, 230, 570, 1085
SmoI	CTYRAG	4 cut(s)	155, 230, 570, 1085
SpeI	ACTAGT	1 cut(s)	395
Sse9I	AATT	7 cut(s)	164, 225, 303, 804, 827, 1042, 1096
SseBI	AGGCCT	3 cut(s)	447, 737, 972
SsiI	CCGC	5 cut(s)	22, 451, 497, 580, 1074
SspMI	CTAG	4 cut(s)	243, 396, 894, 1196
SstI	GAGCTC	1 cut(s)	156
StuI	AGGCCT	3 cut(s)	447, 737, 972
StyD4I	CCNGG	7 cut(s)	412, 413, 694, 790, 972, 1003, 1128
StyI	CCWWGG	1 cut(s)	1069
TaaI	ACNGT	7 cut(s)	10, 55, 89, 629, 1015, 1024, 1116
TaiI	ACGT	1 cut(s)	555
TaqI	TCGA	7 cut(s)	12, 405, 571, 592, 642, 717, 1017
TaqII	GACCGA	2 cut(s)	233, 1107
TasI	AATT	7 cut(s)	164, 225, 303, 804, 827, 1042, 1096
TatI	WGTACW	3 cut(s)	210, 255, 508
TfiI	GAWTC	1 cut(s)	238
Tru1I	TTAA	2 cut(s)	231, 342
Tru9I	TTAA	2 cut(s)	231, 342
TscAI	CASTG	2 cut(s)	634, 967
TseFI	GTSAC	3 cut(s)	4, 179, 629
TseI	GCWGC	3 cut(s)	326, 605, 941
Tsp45I	GTSAC	3 cut(s)	4, 179, 629
TspDTI	ATGAA	2 cut(s)	1068, 1095
TspGWI	ACGGA	3 cut(s)	113, 448, 648
TspMI	CCCGGG	1 cut(s)	413
TspRI	CASTG	2 cut(s)	634, 967
Van91I	CCANNNNNTGG	1 cut(s)	314
Vha464I	CTTAAG	1 cut(s)	230
VneI	GTGCAC	1 cut(s)	548
VpaK11BI	GGWCC	3 cut(s)	44, 1090, 1175
XagI	CCTNNNNNAGG	1 cut(s)	731
XapI	RAATTY	5 cut(s)	164, 225, 303, 1042, 1096
XceI	RCATGY	4 cut(s)	178, 211, 412, 869
XhoI	CTCGAG	1 cut(s)	570
XmaI	CCCGGG	1 cut(s)	413
XmiI	GTMKAC	1 cut(s)	405
XmnI	GAANNNNTTC	1 cut(s)	225
XspI	CTAG	4 cut(s)	243, 396, 894, 1196
ZrmI	AGTACT	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.